Guide to the Human Genome
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Search of human proteins with 169167518

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169167518 PREDICTED: hypothetical protein LOC100127206 [Homo
sapiens]
         (190 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169168288 PREDICTED: hypothetical protein LOC100127206 [Homo ...   385   e-107
gi|169168099 PREDICTED: hypothetical protein LOC100127206 [Homo ...   385   e-107
gi|169167518 PREDICTED: hypothetical protein LOC100127206 [Homo ...   385   e-107
gi|54606888 hypothetical protein LOC23251 [Homo sapiens]               89   2e-18
gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]    35   0.030
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]      33   0.11 
gi|166999223 glutamate receptor, metabotropic 1 isoform beta pre...    32   0.43 
gi|166999098 glutamate receptor, metabotropic 1 isoform alpha pr...    32   0.43 
gi|123701900 solute carrier family 12 (potassium/chloride transp...    32   0.43 
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]     32   0.43 
gi|4502359 brain-specific angiogenesis inhibitor 3 [Homo sapiens]      30   0.96 
gi|30911103 pygopus homolog 1 [Homo sapiens]                           30   1.6  
gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo...    28   3.6  
gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo...    28   3.6  
gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo...    28   3.6  
gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo ...    28   3.6  
gi|239750064 PREDICTED: hypothetical protein XP_002347285 [Homo ...    28   3.6  
gi|148529014 damage-specific DNA binding protein 1 [Homo sapiens]      28   3.6  
gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]             28   3.6  
gi|9256596 protocadherin alpha 8 isoform 1 precursor [Homo sapiens]    28   4.8  
gi|31377581 hypothetical protein LOC124989 [Homo sapiens]              28   4.8  
gi|62548864 Rho guanine nucleotide exchange factor 10 [Homo sapi...    28   6.2  
gi|39725944 MBD2 (methyl-CpG-binding protein)-interacting zinc f...    27   8.1  
gi|39725948 MBD2 (methyl-CpG-binding protein)-interacting zinc f...    27   8.1  
gi|186910188 hypothetical protein LOC100129128 [Homo sapiens]          27   8.1  
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s...    27   8.1  
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s...    27   8.1  
gi|61966703 NHS-like 2 [Homo sapiens]                                  27   8.1  

>gi|169168288 PREDICTED: hypothetical protein LOC100127206 [Homo
           sapiens]
          Length = 190

 Score =  385 bits (988), Expect = e-107
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN 60
           MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN
Sbjct: 1   MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN 60

Query: 61  IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH 120
           IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH
Sbjct: 61  IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH 120

Query: 121 SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV 180
           SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV
Sbjct: 121 SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV 180

Query: 181 TIVTIITFFT 190
           TIVTIITFFT
Sbjct: 181 TIVTIITFFT 190


>gi|169168099 PREDICTED: hypothetical protein LOC100127206 [Homo
           sapiens]
          Length = 190

 Score =  385 bits (988), Expect = e-107
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN 60
           MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN
Sbjct: 1   MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN 60

Query: 61  IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH 120
           IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH
Sbjct: 61  IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH 120

Query: 121 SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV 180
           SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV
Sbjct: 121 SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV 180

Query: 181 TIVTIITFFT 190
           TIVTIITFFT
Sbjct: 181 TIVTIITFFT 190


>gi|169167518 PREDICTED: hypothetical protein LOC100127206 [Homo
           sapiens]
          Length = 190

 Score =  385 bits (988), Expect = e-107
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN 60
           MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN
Sbjct: 1   MDLSVLPNNNHPDKFLQLDVKSLTRSSALLQASLVRFPGGNYPAAQHWQNLVYSQREKKN 60

Query: 61  IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH 120
           IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH
Sbjct: 61  IAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKH 120

Query: 121 SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV 180
           SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV
Sbjct: 121 SLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILV 180

Query: 181 TIVTIITFFT 190
           TIVTIITFFT
Sbjct: 181 TIVTIITFFT 190


>gi|54606888 hypothetical protein LOC23251 [Homo sapiens]
          Length = 916

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)

Query: 81  PPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEY-----DKHSLHT-NLSGHLKENP 134
           P S+ + MK+NPLY D+ L E  E ++  PSWTIEEY     DK  L   +L      NP
Sbjct: 799 PASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAGDKGKLTALDLQTQESLNP 858

Query: 135 NDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS--ILVTIVTIIT 187
           N+L +W+ D+YTPG+D+LLK++E + + +K C++  ++       ILV +V I T
Sbjct: 859 NNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAACTVILVIVVPICT 913


>gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]
          Length = 1585

 Score = 35.4 bits (80), Expect = 0.030
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 74  LVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYD--KHSLH 123
           L TA  P PS  S + +  LYG  SL++         SWT+E  D  K+SL+
Sbjct: 29  LATAFDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLY 80


>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
          Length = 2303

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 18/101 (17%)

Query: 40   GNYPAAQHWQNLVYSQREKKNIAAQRIRGSSADSLVTADS---PPPSMSSVMKNNPLY-- 94
            GN+P       +  SQ++     +++  GSS +S V  D+   PP S S      PL+  
Sbjct: 1725 GNFPTMN---GVSQSQQQNTPPKSEKNGGSSPESDVGTDNKLTPPESQS------PLHWL 1775

Query: 95   GDLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPN 135
             DL+ ++A EE+K+N   T+E   K     + S    E+PN
Sbjct: 1776 ADLAEQKAREEKKENKELTLENQIKEEREQDNS----ESPN 1812


>gi|166999223 glutamate receptor, metabotropic 1 isoform beta
           precursor [Homo sapiens]
          Length = 906

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 14/85 (16%)

Query: 94  YGDLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLL 153
           + D  L+  ++   +NP W   E+ +H     L GHL ENPN  R   G+          
Sbjct: 350 FDDYFLKLRLDTNTRNP-W-FPEFWQHRFQCRLPGHLLENPNFKRICTGN---------- 397

Query: 154 KKEEKQEKHSKFCRMGLILLVVISI 178
             E  +E + +  +MG ++  + ++
Sbjct: 398 --ESLEENYVQDSKMGFVINAIYAM 420


>gi|166999098 glutamate receptor, metabotropic 1 isoform alpha
           precursor [Homo sapiens]
          Length = 1194

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 14/85 (16%)

Query: 94  YGDLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLL 153
           + D  L+  ++   +NP W   E+ +H     L GHL ENPN  R   G+          
Sbjct: 350 FDDYFLKLRLDTNTRNP-W-FPEFWQHRFQCRLPGHLLENPNFKRICTGN---------- 397

Query: 154 KKEEKQEKHSKFCRMGLILLVVISI 178
             E  +E + +  +MG ++  + ++
Sbjct: 398 --ESLEENYVQDSKMGFVINAIYAM 420


>gi|123701900 solute carrier family 12 (potassium/chloride
           transporters), member 7 [Homo sapiens]
          Length = 1083

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 9/111 (8%)

Query: 78  DSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDL 137
           + P P   +  +N+P   ++ +E+      KN +   EE D + + ++L   L    N  
Sbjct: 37  ERPSPGDGNPRENSPFLNNVEVEQESFFEGKNMALFEEEMDSNPMVSSLLNKLANYTN-- 94

Query: 138 RFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVISILVTIVTIITF 188
                   + G     + EE + + +K  RMG  + V +  L  I+ +I F
Sbjct: 95  -------LSQGVVEHEEDEESRRREAKAPRMGTFIGVYLPCLQNILGVILF 138


>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
          Length = 2540

 Score = 31.6 bits (70), Expect = 0.43
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 15/87 (17%)

Query: 54   SQREKKNIAAQRIRGSSADSLVTADS---PPPSMSSVMKNNPLY--GDLSLEEAMEERKK 108
            SQ++     +++  GSS +S V  D+   PP S S      PL+   DL+ ++A EE+K+
Sbjct: 1973 SQQQNTPPKSEKNGGSSPESDVGTDNKLTPPESQS------PLHWLADLAEQKAREEKKE 2026

Query: 109  NPSWTIEEYDKHSLHTNLSGHLKENPN 135
            N   T+E   K     + S    E+PN
Sbjct: 2027 NKELTLENQIKEEREQDNS----ESPN 2049


>gi|4502359 brain-specific angiogenesis inhibitor 3 [Homo sapiens]
          Length = 1522

 Score = 30.4 bits (67), Expect = 0.96
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 46   QHWQNLVYSQREK-KNIAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAME 104
            +H QNL +  R   KN  A  +  ++  S     S   SMSS+ +    Y DL  E+ M 
Sbjct: 1371 EHMQNLPFEPRTAVKNFMASELDDNAGLSRSETGSTI-SMSSLERRKSRYSDLDFEKVMH 1429

Query: 105  ERKKN 109
             RK++
Sbjct: 1430 TRKRH 1434


>gi|30911103 pygopus homolog 1 [Homo sapiens]
          Length = 419

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 66  IRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSWTIEEYDKHSLHTN 125
           ++  + ++ V  ++   S +    NNP  G  +  +  + R    + T E+ +K SLH N
Sbjct: 273 LKNVNRNNAVNQENSRSSSTEATNNNPANG--TQNKPRQPRGAADACTTEKSNKSSLHPN 330

Query: 126 LSGHLKENP 134
             GH   +P
Sbjct: 331 RHGHSSSDP 339


>gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo
           sapiens]
          Length = 820

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 118 DKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS 177
           +KH  H N   +L + PN L    G     G         K++K  KFC + ++LL+V+ 
Sbjct: 638 NKHHCHCN---YLWDPPNCLIKGYGGSVDSG------PPPKRKKKKKFCYLCILLLIVLF 688

Query: 178 ILV 180
           IL+
Sbjct: 689 ILL 691


>gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo
           sapiens]
          Length = 820

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 118 DKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS 177
           +KH  H N   +L + PN L    G     G         K++K  KFC + ++LL+V+ 
Sbjct: 638 NKHHCHCN---YLWDPPNCLIKGYGGSVDSG------PPPKRKKKKKFCYLCILLLIVLF 688

Query: 178 ILV 180
           IL+
Sbjct: 689 ILL 691


>gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo
           sapiens]
          Length = 820

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 118 DKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS 177
           +KH  H N   +L + PN L    G     G         K++K  KFC + ++LL+V+ 
Sbjct: 638 NKHHCHCN---YLWDPPNCLIKGYGGSVDSG------PPPKRKKKKKFCYLCILLLIVLF 688

Query: 178 ILV 180
           IL+
Sbjct: 689 ILL 691


>gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo
           sapiens]
          Length = 820

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 9/63 (14%)

Query: 118 DKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLILLVVIS 177
           +KH  H N   +L + PN L    G     G         K++K  KFC + ++LL+V+ 
Sbjct: 638 NKHHCHCN---YLWDPPNCLIKGYGGSVDSG------PPPKRKKKKKFCYLCILLLIVLF 688

Query: 178 ILV 180
           IL+
Sbjct: 689 ILL 691


>gi|239750064 PREDICTED: hypothetical protein XP_002347285 [Homo
           sapiens]
          Length = 1140

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 129 HLKENPNDLRFWLGDMYTPGFDTLLKKEEKQE 160
           H + +PN  R+ LGDM    F  LL+KEE+ +
Sbjct: 261 HNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMD 292


>gi|148529014 damage-specific DNA binding protein 1 [Homo sapiens]
          Length = 1140

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)

Query: 129 HLKENPNDLRFWLGDMYTPGFDTLLKKEEKQE 160
           H + +PN  R+ LGDM    F  LL+KEE+ +
Sbjct: 261 HNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMD 292


>gi|24308169 dynein, axonemal, heavy chain 3 [Homo sapiens]
          Length = 4116

 Score = 28.5 bits (62), Expect = 3.6
 Identities = 10/31 (32%), Positives = 20/31 (64%)

Query: 129  HLKENPNDLRFWLGDMYTPGFDTLLKKEEKQ 159
            HL++    +R W+ ++Y   +D L+ KE++Q
Sbjct: 2292 HLQDVEKCIRLWIHEVYRVFYDRLIDKEDRQ 2322


>gi|9256596 protocadherin alpha 8 isoform 1 precursor [Homo sapiens]
          Length = 950

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 53  YSQREKKNIAAQRIRGSSADSLVTADSPPPSMSSVMKNNPLYGDLSLEEAMEERKKNPSW 112
           YSQ++ + + +        D +  +   PP + SV        DL+++  ++ R+ NP W
Sbjct: 750 YSQQQPQRVCSGE-GPPKTDLMAFSPCLPPDLGSVDVGEEQ--DLNVDHGLKPRQPNPDW 806

Query: 113 TIEEYDKHSLHTNLSGHLKE 132
                 +  +H+++  HL+E
Sbjct: 807 RYSASLRAGMHSSV--HLEE 824


>gi|31377581 hypothetical protein LOC124989 [Homo sapiens]
          Length = 973

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 50  NLVYSQREKKNIAAQRIRGSSADSLVTADSPPPSMSSVM--KNNPLYGDLSLEEAMEERK 107
           N + S R+  ++A   ++    +SL ++  P PS+S  +  K+N  Y  +   + +E ++
Sbjct: 301 NEITSDRKLSSVAGCYLKYKKKNSL-SSKLPEPSISKKLNKKSNQYYSKIMENDDLESKR 359

Query: 108 KNPSWTIEEY 117
              +W I ++
Sbjct: 360 PKNTWQIRKF 369


>gi|62548864 Rho guanine nucleotide exchange factor 10 [Homo
           sapiens]
          Length = 1344

 Score = 27.7 bits (60), Expect = 6.2
 Identities = 16/49 (32%), Positives = 26/49 (53%)

Query: 124 TNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKEEKQEKHSKFCRMGLIL 172
           T L G+LK N  +L   +   +T G   L+ K+E + + +  CR+ L L
Sbjct: 742 TQLIGNLKGNYQNLNQSVAHDWTSGLQRLILKKEDEIRAADCCRIQLQL 790


>gi|39725944 MBD2 (methyl-CpG-binding protein)-interacting zinc
           finger protein [Homo sapiens]
          Length = 517

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 97  LSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKE 156
           L L E  E    NP W     + HSL        K+NP  L  W G   T  F    K  
Sbjct: 130 LCLWEHCENSFDNPEWFYRHVEAHSLCCEYEAVGKDNPVVLCGWKGCTCT--FKDRSKLR 187

Query: 157 EKQEKHSK 164
           E    H++
Sbjct: 188 EHLRSHTQ 195


>gi|39725948 MBD2 (methyl-CpG-binding protein)-interacting zinc
           finger protein [Homo sapiens]
          Length = 517

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 97  LSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKKE 156
           L L E  E    NP W     + HSL        K+NP  L  W G   T  F    K  
Sbjct: 130 LCLWEHCENSFDNPEWFYRHVEAHSLCCEYEAVGKDNPVVLCGWKGCTCT--FKDRSKLR 187

Query: 157 EKQEKHSK 164
           E    H++
Sbjct: 188 EHLRSHTQ 195


>gi|186910188 hypothetical protein LOC100129128 [Homo sapiens]
          Length = 128

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 108 KNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMY 145
           K P WT+ E    + H+ +  H++E+  +L F L D Y
Sbjct: 10  KEPWWTLPE----NFHSPMVFHMEEDQEELIFGLDDTY 43


>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
           sapiens]
          Length = 576

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 96  DLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKK 155
           +L   EA  E++        E ++H L     G   +   D   +  D+Y P  D   K 
Sbjct: 267 ELQEMEARYEKEFGDGSDENEMEEHELKDEEDGKDSDEAEDAELY-DDLYCPACDKSFKT 325

Query: 156 EEKQEKHSK 164
           E+  + H K
Sbjct: 326 EKAMKNHEK 334


>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
           sapiens]
          Length = 531

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 96  DLSLEEAMEERKKNPSWTIEEYDKHSLHTNLSGHLKENPNDLRFWLGDMYTPGFDTLLKK 155
           +L   EA  E++        E ++H L     G   +   D   +  D+Y P  D   K 
Sbjct: 267 ELQEMEARYEKEFGDGSDENEMEEHELKDEEDGKDSDEAEDAELY-DDLYCPACDKSFKT 325

Query: 156 EEKQEKHSK 164
           E+  + H K
Sbjct: 326 EKAMKNHEK 334


>gi|61966703 NHS-like 2 [Homo sapiens]
          Length = 709

 Score = 27.3 bits (59), Expect = 8.1
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 54  SQREKKNIAAQRIRGSSADSLVTADSPPPSMSSVMKNNP-LYGDLSLEEAMEERKKNPSW 112
           S +++     QR +  S        SPP    S++K+ P L  +       ++R K+   
Sbjct: 178 SAQQEAQHRRQRSKSISLRKAKKKPSPPTRSVSLVKDEPGLLPEGGSALPKDQRPKSLCL 237

Query: 113 TIEEYDKHSLHTNLSGH 129
           ++E    HS H +  GH
Sbjct: 238 SLEHQGHHSSHPDAQGH 254


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,504,292
Number of Sequences: 37866
Number of extensions: 314338
Number of successful extensions: 959
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 940
Number of HSP's gapped (non-prelim): 31
length of query: 190
length of database: 18,247,518
effective HSP length: 96
effective length of query: 94
effective length of database: 14,612,382
effective search space: 1373563908
effective search space used: 1373563908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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