Guide to the Human Genome
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Name: HINFP Sequence: fasta or formatted (517aa) NCBI GI: 39725944
Description:

MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein

Referenced in:

DNA Methylation
Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [517aa] MBD2 (methyl-CpG-binding protein)-interacting zinc finger protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         16           1
 C cysteine            6.2         32           2
 D aspartate           4.8         25           2
 E glutamate          10.3         53           8
 F phenylalanine       4.3         22           2
 G glycine             5.8         30           2
 H histidine           6.0         31           1
 I isoleucine          2.7         14           2
 K lysine              5.2         27           2
 L leucine             8.5         44           2
 M methionine          1.7          9           1
 N asparagine          3.5         18           2
 P proline             6.0         31           3
 Q glutamine           5.8         30           2
 R arginine            5.6         29           2
 S serine              7.7         40           2
 T threonine           3.9         20           1
 V valine              4.6         24           2
 W tryptophan          1.5          8           1
 Y tyrosine            2.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MBD2 (methyl-CpG-binding protein)-interacting zinc f... 
HINFP                 1.000   MBD2 (methyl-CpG-binding protein)-interacting zinc f...
ZNF57                 0.084   zinc finger protein 57 
ZNF384                0.082   nuclear matrix transcription factor 4 isoform d [Ho...
ZNF782                0.081   zinc finger protein 782 
CTCF                  0.080   CCCTC-binding factor 
ZNF77                 0.079   zinc finger protein 77 
ZSCAN2                0.079   zinc finger protein 29 isoform 1 
ZNF709                0.078   zinc finger protein 709 isoform b 
ZNF709                0.078   zinc finger protein 709 isoform a 
ZNF311                0.077   zinc finger protein 311 
ZNF699                0.077   zinc finger protein 699 
ZNF778                0.077   zinc finger protein 778 
ZNF560                0.077   zinc finger protein 560 
ZNF91                 0.076   zinc finger protein 91 
ZFP64                 0.076   zinc finger protein 64 isoform c 
ZFP64                 0.076   zinc finger protein 64 isoform b 
ZFP64                 0.076   zinc finger protein 64 isoform a 
ZNF786                0.076   zinc finger protein 786 
ZNF502                0.076   zinc finger protein 502 
ZNF502                0.076   zinc finger protein 502 
ZNF502                0.076   zinc finger protein 502 
ZNF502                0.076   zinc finger protein 502 
LOC100287429          0.076   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.076   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.076   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.076   zinc finger protein 84 
ZNF84                 0.076   zinc finger protein 84 
ZFP37                 0.076   zinc finger protein 37 homolog 
ZNF761                0.076   zinc finger protein 761 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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