Guide to the Human Genome
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Search of human proteins with 169161650

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens]
         (340 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169160681 PREDICTED: similar to hCG2036949 [Homo sapiens]          696   0.0  
gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens]          696   0.0  
gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens]          696   0.0  
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]              30   3.1  
gi|223029426 solute carrier family 35, member D2 [Homo sapiens]        29   5.3  
gi|44680148 solute carrier family 23 (nucleobase transporters), ...    29   6.9  
gi|40316845 solute carrier family 23 (nucleobase transporters), ...    29   6.9  
gi|13375616 fatty acid desaturase 3 [Homo sapiens]                     29   6.9  
gi|38505290 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|38505288 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|38505286 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|38505282 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|38505278 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|38505272 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|38505268 voltage-dependent calcium channel alpha 1G subunit i...    29   6.9  
gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens]     29   6.9  
gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens]    29   6.9  
gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]        28   9.0  
gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]         28   9.0  
gi|187829623 GC-rich promoter binding protein 1 isoform 2 [Homo ...    28   9.0  

>gi|169160681 PREDICTED: similar to hCG2036949 [Homo sapiens]
          Length = 340

 Score =  696 bits (1797), Expect = 0.0
 Identities = 340/340 (100%), Positives = 340/340 (100%)

Query: 1   MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60
           MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG
Sbjct: 1   MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60

Query: 61  HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120
           HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP
Sbjct: 61  HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120

Query: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180
           PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS
Sbjct: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180

Query: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240
           IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL
Sbjct: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240

Query: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300
           GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC
Sbjct: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300

Query: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340
           CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK
Sbjct: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340


>gi|169161650 PREDICTED: similar to hCG2036949 [Homo sapiens]
          Length = 340

 Score =  696 bits (1797), Expect = 0.0
 Identities = 340/340 (100%), Positives = 340/340 (100%)

Query: 1   MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60
           MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG
Sbjct: 1   MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60

Query: 61  HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120
           HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP
Sbjct: 61  HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120

Query: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180
           PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS
Sbjct: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180

Query: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240
           IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL
Sbjct: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240

Query: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300
           GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC
Sbjct: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300

Query: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340
           CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK
Sbjct: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340


>gi|169161355 PREDICTED: similar to hCG2036949 [Homo sapiens]
          Length = 340

 Score =  696 bits (1797), Expect = 0.0
 Identities = 340/340 (100%), Positives = 340/340 (100%)

Query: 1   MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60
           MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG
Sbjct: 1   MPCPQGEPSVCRLQAALRFLPVSDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSG 60

Query: 61  HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120
           HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP
Sbjct: 61  HVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGTTGLPGTTSLSSQPFVSDKGP 120

Query: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180
           PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS
Sbjct: 121 PLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFS 180

Query: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240
           IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL
Sbjct: 181 IIFSFSRKCHYASRMLLVSFLLDMAVRAMTSHINICSKLGAELNDFAVFTTFGLASALLL 240

Query: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300
           GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC
Sbjct: 241 GVDGLLSGILAIIYVSAASFHLCFYSPGVPSTYKGLPCPYASCILASTSLLTKGNRFILC 300

Query: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340
           CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK
Sbjct: 301 CMASLMILFMMDQSYYPYDKILESENWKKLVYIGGTVGEK 340


>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
          Length = 2063

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 9/124 (7%)

Query: 23   SDKDSAPLLNTTVPATGCHSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQ--D 80
            +D+++ P   +T   +   +   G+    R    +  G    D +   +LT AC+     
Sbjct: 1779 ADQNTLPSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGS 1838

Query: 81   LEAPQLQPCA---SEGVNLDCGTTGLPGTTSLSSQPFVSDKGPP----LRWEKGPIPPAF 133
            LE  + Q  A   +EG  LD    GL GT  LS++       PP    L+    P+ P  
Sbjct: 1839 LEKGEEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGT 1898

Query: 134  WAMG 137
             + G
Sbjct: 1899 ASAG 1902


>gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
          Length = 337

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 216 CSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIYVSAAS--FHLCFYSPGVPSTY 273
           CS L   +N  A+ TT+G  S + LG+ G ++  + I+YVS  +   H   +   +P   
Sbjct: 37  CSFLIVLVNK-ALLTTYGFPSPIFLGI-GQMAATIMILYVSKLNKIIHFPDFDKKIPVKL 94

Query: 274 KGLPCPYASCILASTSLLTK 293
             LP  Y    ++  S  +K
Sbjct: 95  FPLPLLYVGNHISGLSSTSK 114


>gi|44680148 solute carrier family 23 (nucleobase transporters),
           member 2 [Homo sapiens]
          Length = 650

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 22/102 (21%)

Query: 232 FGLASALLLGVDGLLSGILAIIYVSAASFHLCFY-----SPGVPSTYKGLPCPYASCIL- 285
           +GL +    GV G+LS ++A I  S   ++ C        P + +  +G+     SC+L 
Sbjct: 370 WGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLD 429

Query: 286 -------ASTSL--------LTK-GNRFILCCMASLMILFMM 311
                   STS         +TK G+R ++ C A+LM+   M
Sbjct: 430 GIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGM 471


>gi|40316845 solute carrier family 23 (nucleobase transporters),
           member 2 [Homo sapiens]
          Length = 650

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 22/102 (21%)

Query: 232 FGLASALLLGVDGLLSGILAIIYVSAASFHLCFY-----SPGVPSTYKGLPCPYASCIL- 285
           +GL +    GV G+LS ++A I  S   ++ C        P + +  +G+     SC+L 
Sbjct: 370 WGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLD 429

Query: 286 -------ASTSL--------LTK-GNRFILCCMASLMILFMM 311
                   STS         +TK G+R ++ C A+LM+   M
Sbjct: 430 GIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGM 471


>gi|13375616 fatty acid desaturase 3 [Homo sapiens]
          Length = 445

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/66 (27%), Positives = 31/66 (46%)

Query: 127 GPIPPAFWAMGLQESKGTSFFLSHDQSHSQINEVSWKDVTSALSLANMVLGLFSIIFSFS 186
           G +P A  A  L  S+  S+ L HD  H+ I + SW +  +   +   + G  +  ++F 
Sbjct: 159 GWVPSALAAFILAISQAQSWCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFR 218

Query: 187 RKCHYA 192
              H+A
Sbjct: 219 HFQHHA 224


>gi|38505290 voltage-dependent calcium channel alpha 1G subunit
            isoform 13 [Homo sapiens]
          Length = 2243

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1842 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1901

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1902 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1951


>gi|38505288 voltage-dependent calcium channel alpha 1G subunit
            isoform 12 [Homo sapiens]
          Length = 2250

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1849 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1908

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1909 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1958


>gi|38505286 voltage-dependent calcium channel alpha 1G subunit
            isoform 10 [Homo sapiens]
          Length = 2266

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1865 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1924

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1925 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1974


>gi|38505282 voltage-dependent calcium channel alpha 1G subunit
            isoform 8 [Homo sapiens]
          Length = 2284

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1883 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1942

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1943 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1992


>gi|38505278 voltage-dependent calcium channel alpha 1G subunit
            isoform 11 [Homo sapiens]
          Length = 2261

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1860 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1919

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1920 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1969


>gi|38505272 voltage-dependent calcium channel alpha 1G subunit
            isoform 9 [Homo sapiens]
          Length = 2273

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1872 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1931

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1932 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1981


>gi|38505268 voltage-dependent calcium channel alpha 1G subunit
            isoform 14 [Homo sapiens]
          Length = 2171

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 41   HSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDLEAPQLQPCASEGVNLDCGT 100
            HS  G    +  +  P+         L PA    +  +  LE P +QP  +E    D  T
Sbjct: 1849 HSPLGSPFLWPGVEGPDSPDSPKPGALHPAAHARSASHFSLEHPTMQPHPTELPGPDLLT 1908

Query: 101  ---TGLPGTTSLSSQPFVSDKGPPLRWEKGPIPPAFWAMGLQESKGTSFFLSHDQ 152
               +G+  T SL +  ++   G      +GP+    W  GL +++  S    H Q
Sbjct: 1909 VRKSGVSRTHSLPNDSYMCRHGST---AEGPLGHRGW--GLPKAQSGSVLSVHSQ 1958


>gi|41054804 hypothetical protein LOC84970 isoform b [Homo sapiens]
          Length = 408

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 29  PLLNTTVPATGCHSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDL 81
           P L   V   G   +F   +      NP  +G+V T H +P  +T A  NQ L
Sbjct: 219 PRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPH-FPTAMTSATLNQPL 270


>gi|197927133 hypothetical protein LOC84970 isoform a [Homo sapiens]
          Length = 598

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 29  PLLNTTVPATGCHSRFGGALAYERLRNPNGSGHVATDHLWPAVLTGACQNQDL 81
           P L   V   G   +F   +      NP  +G+V T H +P  +T A  NQ L
Sbjct: 409 PRLRNKVEVDGPELKFNAPVTVADKNNPKYTGNVFTPH-FPTAMTSATLNQPL 460


>gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]
          Length = 209

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 212 HINICSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIY 254
           HI +       L  F V+   G+ +A++LG+  L+S ILA++Y
Sbjct: 149 HIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLY 191


>gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]
          Length = 269

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 212 HINICSKLGAELNDFAVFTTFGLASALLLGVDGLLSGILAIIY 254
           HI +       L  F V+   G+ +A++LG+  L+S ILA++Y
Sbjct: 149 HIRLYVVEKENLPVFPVWVVVGIVTAVVLGLTLLISMILAVLY 191


>gi|187829623 GC-rich promoter binding protein 1 isoform 2 [Homo
           sapiens]
          Length = 493

 Score = 28.5 bits (62), Expect = 9.0
 Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 24/118 (20%)

Query: 50  YERLRNPNGS------GHVATDHLWP------AVLTGACQNQDLEAPQLQPCASEGVNLD 97
           YER  N N S      G  A  H +P      A L     N    AP++     +G   D
Sbjct: 144 YEREPNHNKSLAAGVWGLHAQTHTYPTKKISQAPLLEYPPNPKSRAPRML-VIKKGNTKD 202

Query: 98  CGTTGLPGTTSLSSQPFVSDKGPPLRWEKGPIP--------PAFWAMGLQESK-GTSF 146
              +G P   +L SQP  +  GP +   KG +P        P  W    +E+K GTSF
Sbjct: 203 LQLSGFPVVGNLPSQPVKNGTGPSV--YKGLVPKPAAPPTKPTQWKSQTKENKVGTSF 258


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,753,221
Number of Sequences: 37866
Number of extensions: 633310
Number of successful extensions: 1504
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1498
Number of HSP's gapped (non-prelim): 20
length of query: 340
length of database: 18,247,518
effective HSP length: 103
effective length of query: 237
effective length of database: 14,347,320
effective search space: 3400314840
effective search space used: 3400314840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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