Search of human proteins with 16876445

Search of human proteins with 16876445

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]
         (93 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]         181   1e-46
gi|50363226 secretoglobin, family 3A, member 1 [Homo sapiens]          64   3e-11
gi|5729909 lipophilin B precursor [Homo sapiens]                       28   1.2  
gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]      27   4.6  
gi|162329612 phosphodiesterase 4A isoform 3 [Homo sapiens]             26   6.0  
gi|162329610 phosphodiesterase 4A isoform 2 [Homo sapiens]             26   6.0  
gi|162329608 phosphodiesterase 4A isoform 1 [Homo sapiens]             26   6.0  
gi|54607053 GCN1 general control of amino-acid synthesis 1-like ...    26   6.0  
gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Hom...    26   7.9  
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [...    26   7.9  

>gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]
          Length = 93

 Score =  181 bits (459), Expect = 1e-46
 Identities = 93/93 (100%), Positives = 93/93 (100%)

Query: 1  MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFMDPLKLLLKTLGISV 60
          MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFMDPLKLLLKTLGISV
Sbjct: 1  MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFMDPLKLLLKTLGISV 60

Query: 61 EHLVEGLRKCVNELGPEASEAVKKLLEALSHLV 93
          EHLVEGLRKCVNELGPEASEAVKKLLEALSHLV
Sbjct: 61 EHLVEGLRKCVNELGPEASEAVKKLLEALSHLV 93


>gi|50363226 secretoglobin, family 3A, member 1 [Homo sapiens]
          Length = 104

 Score = 63.5 bits (153), Expect = 3e-11
 Identities = 44/101 (43%), Positives = 53/101 (52%), Gaps = 10/101 (9%)

Query: 1   MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLP---------LDNILPFMDPLKL 51
           MKL  +  L     CS SA AFL+         +A L          L N L  ++PLKL
Sbjct: 1   MKLAALLGLCVALSCS-SAAAFLVGSAKPVAQPVAALESAAEAGAGTLANPLGTLNPLKL 59

Query: 52  LLKTLGISVEHLVEGLRKCVNELGPEASEAVKKLLEALSHL 92
           LL +LGI V HL+EG +KCV ELGP+A  AVK L   L  L
Sbjct: 60  LLSSLGIPVNHLIEGSQKCVAELGPQAVGAVKALKALLGAL 100


>gi|5729909 lipophilin B precursor [Homo sapiens]
          Length = 90

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 17/92 (18%)

Query: 1  MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPLPLDNILPFM---DPL-KLLLKTL 56
          MKL    LLVT++LC Y A A           +  P  +  +L F    +PL KL L   
Sbjct: 1  MKLSVCLLLVTLALCCYQANA-----------EFCPALVSELLDFFFISEPLFKLSLAKF 49

Query: 57 GISVEHLVE--GLRKCVNELGPEASEAVKKLL 86
              E +    G+++C +++  +    + ++L
Sbjct: 50 DAPPEAVAAKLGVKRCTDQMSLQKRSLIAEVL 81


>gi|222144249 dynein heavy chain domain 1 isoform 1 [Homo sapiens]
          Length = 4753

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 36   PLPLDNILPFMDPLKLLLKTLGISVEHLVEGLRKCVNELGPEASEAVKKL 85
            PLPL   LP    L  L K L +++ H+++G        GP   EA+K+L
Sbjct: 1437 PLPLHPDLPKW--LASLEKCLRLALVHMLQGCVAARLARGPSLGEALKQL 1484


>gi|162329612 phosphodiesterase 4A isoform 3 [Homo sapiens]
          Length = 825

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 3   LVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPL 37
           +VT F  V  SL S  +   L+  VP+P +K +PL
Sbjct: 116 IVTPFAQVLASLRSVRSNFSLLTNVPVPSNKRSPL 150


>gi|162329610 phosphodiesterase 4A isoform 2 [Homo sapiens]
          Length = 860

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 3   LVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPL 37
           +VT F  V  SL S  +   L+  VP+P +K +PL
Sbjct: 151 IVTPFAQVLASLRSVRSNFSLLTNVPVPSNKRSPL 185


>gi|162329608 phosphodiesterase 4A isoform 1 [Homo sapiens]
          Length = 886

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 3   LVTIFLLVTISLCSYSATAFLINKVPLPVDKLAPL 37
           +VT F  V  SL S  +   L+  VP+P +K +PL
Sbjct: 177 IVTPFAQVLASLRSVRSNFSLLTNVPVPSNKRSPL 211


>gi|54607053 GCN1 general control of amino-acid synthesis 1-like 1
           [Homo sapiens]
          Length = 2671

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 51  LLLKTLGISVEHLVEGLRKCVNELGPEASEAVKKLLEALSHL 92
           LLL+ LG S +H V+G  K + +L  E    V++ L A+  L
Sbjct: 149 LLLEVLGGSHKHAVDGAVKKLTKLWKENPGLVEQYLSAILSL 190


>gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Homo
          sapiens]
          Length = 91

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 11/93 (11%)

Query: 1  MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKL---APLPLDNILPFMDPLKLLLKTLG 57
          MKL     LVT++LC  SA+A +       ++ L    P   +  +    P +       
Sbjct: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQ------- 53

Query: 58 ISVEHLVEGLRKCVNELGPEASEAVKKLLEALS 90
            +      L+K V+ L  +  E++ KL+E ++
Sbjct: 54 -DMREAGAQLKKLVDTLPQKPRESIIKLMEKIA 85


>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
            sapiens]
          Length = 2564

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 45   FMDPLKLLLKTLGISVEHLVEGLRKCVNELGPEASEAVKKLLE 87
            F+  ++L  + + ++V+   EGL +  N  G +A EAV +LLE
Sbjct: 1244 FLTTMELSQQKMQVAVQ-AAEGLLRQGNIYGEQAQEAVTRLLE 1285


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.141    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,173,027
Number of Sequences: 37866
Number of extensions: 118798
Number of successful extensions: 326
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 318
Number of HSP's gapped (non-prelim): 11
length of query: 93
length of database: 18,247,518
effective HSP length: 64
effective length of query: 29
effective length of database: 15,824,094
effective search space: 458898726
effective search space used: 458898726
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.