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Search of human proteins with 110815809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|110815809 zinc finger, RAN-binding domain containing 1
protein [Homo sapiens]
(708 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|110815809 zinc finger, RAN-binding domain containing 1 protei... 1468 0.0
gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo ... 129 9e-30
gi|118026942 zinc finger protein Cezanne [Homo sapiens] 120 4e-27
gi|18702331 OTU domain containing 7A [Homo sapiens] 117 5e-26
gi|24430146 nucleoporin 153kDa [Homo sapiens] 65 3e-10
gi|150418007 RAN binding protein 2 [Homo sapiens] 62 1e-09
gi|109150431 ring finger protein 31 [Homo sapiens] 49 2e-05
gi|5032105 small optic lobes [Homo sapiens] 48 3e-05
gi|157388969 nei endonuclease VIII-like 3 [Homo sapiens] 39 0.017
gi|60218897 YY1 associated factor 2 [Homo sapiens] 37 0.082
gi|14149669 mitogen-activated protein kinase kinase kinase 7 int... 37 0.082
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 37 0.082
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 37 0.082
gi|112363092 RING1 and YY1 binding protein [Homo sapiens] 36 0.11
gi|62860046 zinc finger, RAN-binding domain containing 3 [Homo s... 36 0.11
gi|98991767 mitogen-activated protein kinase kinase kinase 7 int... 35 0.24
gi|118918415 shank-interacting protein-like 1 [Homo sapiens] 35 0.31
gi|30578416 ring finger protein 113B [Homo sapiens] 34 0.41
gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens] 34 0.53
gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo ... 34 0.53
gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo ... 34 0.53
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 33 1.2
gi|5902158 ring finger protein 113A [Homo sapiens] 33 1.2
gi|157426879 nuclear protein localization 4 [Homo sapiens] 33 1.2
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 32 1.6
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 32 1.6
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 32 1.6
gi|156104874 envoplakin [Homo sapiens] 32 1.6
gi|148612849 kinesin heavy chain member 2 isoform 2 [Homo sapiens] 32 1.6
gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b ... 32 2.6
>gi|110815809 zinc finger, RAN-binding domain containing 1 protein
[Homo sapiens]
Length = 708
Score = 1468 bits (3801), Expect = 0.0
Identities = 708/708 (100%), Positives = 708/708 (100%)
Query: 1 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG 60
MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG
Sbjct: 1 MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEG 60
Query: 61 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP 120
GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP
Sbjct: 61 GSSPLICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESP 120
Query: 121 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI 180
QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI
Sbjct: 121 QSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNI 180
Query: 181 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG 240
EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG
Sbjct: 181 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG 240
Query: 241 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV 300
SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV
Sbjct: 241 SKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEV 300
Query: 301 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA 360
RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA
Sbjct: 301 RLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIA 360
Query: 361 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW 420
ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW
Sbjct: 361 ASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW 420
Query: 421 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR 480
SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR
Sbjct: 421 SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTR 480
Query: 481 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY 540
WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY
Sbjct: 481 WKDWESWYSQSFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVY 540
Query: 541 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR 600
GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR
Sbjct: 541 GVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNR 600
Query: 601 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV 660
GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV
Sbjct: 601 GAGANLNTDDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGV 660
Query: 661 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE 708
LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE
Sbjct: 661 LVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGEEDEDDEDE 708
>gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo
sapiens]
Length = 790
Score = 129 bits (324), Expect = 9e-30
Identities = 99/277 (35%), Positives = 141/277 (50%), Gaps = 44/277 (15%)
Query: 392 PTVQEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQA 451
P +E + ++DR++Q LE + + NW E+ +L AL G+CL+ + Q
Sbjct: 58 PQFREIIHKALIDRNIQATLESQKKL-NWCREVR-----KLVALKTNGDGNCLMHATSQY 111
Query: 452 TWGIYDKDSVLRKALHDSLHDC-SHWFYTRWKDWESWYSQSF---GLHFSLREEQWQEDW 507
WG+ D D VLRKAL +L + + F RW+ ES SQ F GL + R W ++W
Sbjct: 112 MWGVQDTDLVLRKALFSTLKETDTRNFKFRWQ-LESLKSQEFVETGLCYDTRN--WNDEW 168
Query: 508 AFILSLASQ--PGA-------SLEQTHIFVLAHILRRPIIVYGVKYYKSFR-GETLGYTR 557
++ +AS P A SLE+ HIFVL +ILRRPIIV K +S G +
Sbjct: 169 DNLIKMASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLK 228
Query: 558 FQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFL 617
G+YLPL W C++ PI LGY HF LV +++ G I +
Sbjct: 229 VGGIYLPLHWPAQECYRYPIVLGYDSHHFVPLVTLKDSG---------------PEIRAV 273
Query: 618 PLVDSER---KLLHVHFLSAQELGNEEQQEKLLREWL 651
PLV+ +R + L VHFL+ E E +EKLL+E+L
Sbjct: 274 PLVNRDRGRFEDLKVHFLTDPE---NEMKEKLLKEYL 307
>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
Length = 843
Score = 120 bits (301), Expect = 4e-27
Identities = 88/267 (32%), Positives = 132/267 (49%), Gaps = 50/267 (18%)
Query: 398 LFDEVLDRDVQKELEEESPIINWSLELATRLD---------SRLYALWNRTAGDCLLDSV 448
+++E ++++L E+S ++ +LE A RL+ RL L G+CLL +
Sbjct: 142 VYNEDFRSFIERDLIEQSMLV--ALEQAGRLNWWVSVDPTSQRLLPLATTGDGNCLLHAA 199
Query: 449 LQATWGIYDKDSVLRKALHDSLHDC--SHWFYTRWKDWESWYSQSFGLHFSLREEQWQED 506
WG +D+D +LRKAL+ + RW+ ++ ++ GL ++ E++WQ++
Sbjct: 200 SLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRWRWQQTQQNKESGLVYT--EDEWQKE 257
Query: 507 WAFILSLASQP--------GA--------------SLEQTHIFVLAHILRRPIIVYGVKY 544
W ++ LAS GA SLE+ H+FVLAH+LRRPI+V
Sbjct: 258 WNELIKLASSEPRMHLGTNGANCGGVESSEEPVYESLEEFHVFVLAHVLRRPIVVVADTM 317
Query: 545 YKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGA 604
+ GE F G+YLPL S C +SP+ L Y + HFSALV+ME
Sbjct: 318 LRDSGGEAFAPIPFGGIYLPLEVPASQCHRSPLVLAYDQAHFSALVSMEQ---------- 367
Query: 605 NLNTDDDVTITFLPLVDSERKLLHVHF 631
NT + I PL DSE KLL +HF
Sbjct: 368 KENTKEQAVI---PLTDSEYKLLPLHF 391
>gi|18702331 OTU domain containing 7A [Homo sapiens]
Length = 926
Score = 117 bits (292), Expect = 5e-26
Identities = 90/282 (31%), Positives = 127/282 (45%), Gaps = 57/282 (20%)
Query: 378 LVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELE----EESPIINWSLELATRLDSRLY 433
+ TF LP DL +V + F ++RD+ ++ E++ +NW + T RL
Sbjct: 148 IYTFQLP----DL--SVYSEDFRSFIERDLIEQATMVALEQAGRLNWWSTVCTSC-KRLL 200
Query: 434 ALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHW--FYTRWKDWESWYSQS 491
L G+CLL + WG +D+D VLRKAL+ + + RW+ W+
Sbjct: 201 PLATTGDGNCLLHAASLGMWGFHDRDLVLRKALYTMMRTGAEREALKRRWR-WQQTQQN- 258
Query: 492 FGLHFSLREEQWQEDWAFILSLASQPGA----------------------SLEQTHIFVL 529
+EE+W+ +W +L LAS SLE+ H+FVL
Sbjct: 259 -------KEEEWEREWTELLKLASSEPRTHFSKNGGTGGGVDNSEDPVYESLEEFHVFVL 311
Query: 530 AHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTRGHFSAL 589
AHILRRPI+V + GE F G+YLPL + C SP+ L Y + HFSAL
Sbjct: 312 AHILRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSPLVLAYDQAHFSAL 371
Query: 590 VAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKLLHVHF 631
V+ME D +PL DSE KLL +HF
Sbjct: 372 VSME-------------QRDQQREQAVIPLTDSEHKLLPLHF 400
>gi|24430146 nucleoporin 153kDa [Homo sapiens]
Length = 1475
Score = 64.7 bits (156), Expect = 3e-10
Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 25/211 (11%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTE--GGSSPL 65
W C+ C +N P AIKC C +P GT + + S+ SS+ + L
Sbjct: 726 WDCDTCLVQNKPEAIKCVACETPKP-GTCVKRALTLTVVSESAETMTASSSSCTVTTGTL 784
Query: 66 ICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGS 125
D RP W C +C N +C C+S++ P S +S S
Sbjct: 785 GFGDKFKRP----------IGSWECSVCCVSNNAEDNKCVSCMSEK----PGSSVPASSS 830
Query: 126 GSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNIEAIEL 185
+ PV+ P K W C +C +N A + +C+ C+ +P +
Sbjct: 831 STVPVSL---PSGGSLGLEKFKKPEGSWDCELCLVQNKADSTKCLACESAKPGTKSGFKG 887
Query: 186 AETEEASSIINEQDRARWR---GSCSSGNSQ 213
+T +SS N + ++ S SSG SQ
Sbjct: 888 FDTSSSSS--NSAASSSFKFGVSSSSSGPSQ 916
>gi|150418007 RAN binding protein 2 [Homo sapiens]
Length = 3224
Score = 62.4 bits (150), Expect = 1e-09
Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 40/194 (20%)
Query: 3 ERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGS 62
+ G W C C+ +N +A KC C+ PS + P E
Sbjct: 1351 KEGSWWHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPL---------------AETVF 1395
Query: 63 SPLICPDSSARPRVKSSYSMENANK---WSCHMCTYLNWPRAIRCTQCLSQRRTRSPTES 119
+P P++ V+ +++ K W C +C N P RC C + T+S +S
Sbjct: 1396 TPKTSPEN-----VQDRFALVTPKKEGHWDCSICLVRNEPTVSRCIAC---QNTKSANKS 1447
Query: 120 PQSS--------GSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVV 171
S G G P + D R+ +T+ W CS C +N + +C
Sbjct: 1448 GSSFVHQASFKFGQGDLPKPINSD------FRSVFSTKEGQWDCSACLVQNEGSSTKCAA 1501
Query: 172 CDHPRPNNIEAIEL 185
C +PR ++ A +
Sbjct: 1502 CQNPRKQSLPATSI 1515
Score = 62.4 bits (150), Expect = 1e-09
Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 53/220 (24%)
Query: 7 KWACEYCTYENWPSAIKCTMCRAQR----PSGTIITEDPFKSGSSDVGR----------- 51
+W C C +N S+ KC C+ R P+ +I T FK G+S+ +
Sbjct: 1482 QWDCSACLVQNEGSSTKCAACQNPRKQSLPATSIPTPASFKFGTSETSKTLKSGFEDMFA 1541
Query: 52 ----DWDPSS----TEGGSSPLICPDSSARPRVKSSYS---------------------- 81
WD SS E ++ + + +P +S
Sbjct: 1542 KKEGQWDCSSCLVRNEANATRCVACQNPDKPSPSTSVPAPASFKFGTSETSKAPKSGFEG 1601
Query: 82 --MENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEE 139
+ +W C +C N A +C C ++P + Q++ + S P + +
Sbjct: 1602 MFTKKEGQWDCSVCLVRNEASATKCIAC------QNPGKQNQTTSAVSTPASSETSKAPK 1655
Query: 140 YNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNN 179
+ W CSVC N A A +C+ C +P N
Sbjct: 1656 SGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQNPGKQN 1695
Score = 61.2 bits (147), Expect = 3e-09
Identities = 43/187 (22%), Positives = 65/187 (34%), Gaps = 28/187 (14%)
Query: 7 KWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPLI 66
+W C C N SA KC C ++P K + T S+P
Sbjct: 1609 QWDCSVCLVRNEASATKCIAC-----------QNPGKQNQT----------TSAVSTPAS 1647
Query: 67 CPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSG 126
S A + +W C +C N A +C C ++P + Q++ +
Sbjct: 1648 SETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIAC------QNPGKQNQTTSAV 1701
Query: 127 SRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHP-RPNNIEAIEL 185
S P + + + W CSVC N A A +C+ C P + N AI
Sbjct: 1702 STPASSETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQCPSKQNQTTAIST 1761
Query: 186 AETEEAS 192
+ E S
Sbjct: 1762 PASSEIS 1768
Score = 55.8 bits (133), Expect = 1e-07
Identities = 41/175 (23%), Positives = 62/175 (35%), Gaps = 33/175 (18%)
Query: 7 KWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPLI 66
+W C C N SA KC C ++P K + T S+P
Sbjct: 1668 QWDCSVCLVRNEASATKCIAC-----------QNPGKQNQT----------TSAVSTPAS 1706
Query: 67 CPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCT--QCLSQRRTRSPTESPQSSG 124
S A + +W C +C N A +C QC S++ + +P SS
Sbjct: 1707 SETSKAPKSGFEGMFTKKEGQWDCSVCLVRNEASATKCIACQCPSKQNQTTAISTPASSE 1766
Query: 125 SGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNN 179
P + + R W CSVC +N + + +CV CD +P +
Sbjct: 1767 ISKAPKS----------GFEGMFIRKGQWDCSVCCVQNESSSLKCVACDASKPTH 1811
Score = 46.2 bits (108), Expect = 1e-04
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 66 ICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGS 125
IC + + + + + W C+ C+ N A +C C + + P + +
Sbjct: 1334 ICKSDAGNLNFEFQVAKKEGSWWHCNSCSLKNASTAKKCVSCQNLNPSNKELVGPPLAET 1393
Query: 126 GSRPVAFSVDPCEEYNDRNKLNT--RTQHWTCSVCTYENWAKAKRCVVCDHPRPNN 179
P P E DR L T + HW CS+C N RC+ C + + N
Sbjct: 1394 VFTP---KTSP-ENVQDRFALVTPKKEGHWDCSICLVRNEPTVSRCIACQNTKSAN 1445
Score = 36.6 bits (83), Expect = 0.082
Identities = 29/124 (23%), Positives = 45/124 (36%), Gaps = 28/124 (22%)
Query: 7 KWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPLI 66
+W C C N SA KC C+ P K + P+S+E +P
Sbjct: 1727 QWDCSVCLVRNEASATKCIACQC-----------PSKQNQTTAIST--PASSEISKAP-- 1771
Query: 67 CPDSSARPRVKSSYS--MENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSP-TESPQSS 123
KS + +W C +C N +++C C + + T P E+P +
Sbjct: 1772 ----------KSGFEGMFIRKGQWDCSVCCVQNESSSLKCVACDASKPTHKPIAEAPSAF 1821
Query: 124 GSGS 127
GS
Sbjct: 1822 TLGS 1825
>gi|109150431 ring finger protein 31 [Homo sapiens]
Length = 1072
Score = 48.9 bits (115), Expect = 2e-05
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 36/168 (21%)
Query: 6 IKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPL 65
+ W C C N P A+ C C R G +G + GG P
Sbjct: 302 LPWHCAACAMLNEPWAVLCVACDRPR-------------GCKGLGLGTEGPQGTGGLEPD 348
Query: 66 ICPDSSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGS 125
+ +W+C CT+ N A+ C+ C R P S
Sbjct: 349 LA-----------------RGRWACQSCTFENEAAAVLCSIC-----ERPRLAQPPSLVV 386
Query: 126 GSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCD 173
SR + P ++ D + ++Q W C CT+ N + CV+C+
Sbjct: 387 DSRDAGICLQPLQQ-GDALLASAQSQVWYCIHCTFCNSSPGWVCVMCN 433
Score = 48.5 bits (114), Expect = 2e-05
Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 21/92 (22%)
Query: 88 WSCHMCTYLNWPRAIRCTQCLSQRRTRS---PTESPQSSGSGSRPVAFSVDPCEEYNDRN 144
W C C LN P A+ C C R + TE PQ +G G P
Sbjct: 304 WHCAACAMLNEPWAVLCVACDRPRGCKGLGLGTEGPQGTG-GLEP--------------- 347
Query: 145 KLNTRTQHWTCSVCTYENWAKAKRCVVCDHPR 176
+ W C CT+EN A A C +C+ PR
Sbjct: 348 --DLARGRWACQSCTFENEAAAVLCSICERPR 377
>gi|5032105 small optic lobes [Homo sapiens]
Length = 1086
Score = 48.1 bits (113), Expect = 3e-05
Identities = 40/152 (26%), Positives = 56/152 (36%), Gaps = 18/152 (11%)
Query: 35 TIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDSSARPRVKSSYSMENANKWSCHMCT 94
+++ E+ + G+S V + S+ GS + + R +S S + WSC CT
Sbjct: 296 SVLEEEATEGGTSRV----EAGSSTSGSDIIDLAGDTVR-YTPASPSSPDFTTWSCAKCT 350
Query: 95 YLNWPRAIRCTQCLS------QRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNK--- 145
N A RC+ C Q PT P P S C + K
Sbjct: 351 LRNPTVAPRCSACGCSKLHGFQEHGEPPTHCPDCGADKPSPCGRS---CGRVSSAQKAAR 407
Query: 146 -LNTRTQHWTCSVCTYENWAKAKRCVVCDHPR 176
L R W C CT N +AK C C P+
Sbjct: 408 VLPERPGQWACPACTLLNALRAKHCAACHTPQ 439
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/135 (26%), Positives = 48/135 (35%), Gaps = 42/135 (31%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPLIC 67
W+C CT N A +C+ C + G E G P C
Sbjct: 344 WSCAKCTLRNPTVAPRCSACGCSKLHG----------------------FQEHGEPPTHC 381
Query: 68 PDSSA-RP--------RVKSSYSM-----ENANKWSCHMCTYLNWPRAIRCTQC------ 107
PD A +P RV S+ E +W+C CT LN RA C C
Sbjct: 382 PDCGADKPSPCGRSCGRVSSAQKAARVLPERPGQWACPACTLLNALRAKHCAACHTPQLL 441
Query: 108 LSQRRTRSPTESPQS 122
++QRR +P +S
Sbjct: 442 VAQRRGAAPLRRRES 456
Score = 40.4 bits (93), Expect = 0.006
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 24/91 (26%)
Query: 82 MENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYN 141
M +WSC CT+LN +C+ C +P P + N
Sbjct: 1 MATVGEWSCVRCTFLNPAGQRQCSIC------EAPRHKP------------------DLN 36
Query: 142 DRNKLNTRTQHWTCSVCTYENWAKAKRCVVC 172
+L+ Q W C+ CT+ N+ + C VC
Sbjct: 37 HILRLSVEEQKWPCARCTFRNFLGKEACEVC 67
Score = 36.2 bits (82), Expect = 0.11
Identities = 33/139 (23%), Positives = 46/139 (33%), Gaps = 27/139 (19%)
Query: 7 KWACEYCTYENWPSAIKCTMC----------------RAQRPSGTIITEDPFKSGSSDVG 50
KW C CT+ N+ C +C P I +P S + G
Sbjct: 47 KWPCARCTFRNFLGKEACEVCGFTPEPAPGAAFLPVLNGVLPKPPAILGEPKGSCQEEAG 106
Query: 51 RDWDPSSTEG--GSSPLI--CPDSSARPRVKSSY---SMENANKWSCHMCTYLNWPRAIR 103
P T G + P C D + + + E W+C CT N P A
Sbjct: 107 ----PVRTAGLVATEPARGQCEDKDEEEKEEQEEEEGAAEPRGGWACPRCTLHNTPVASS 162
Query: 104 CTQCLSQRRTRSPTESPQS 122
C+ C RR P P++
Sbjct: 163 CSVCGGPRRLSLPRIPPEA 181
Score = 30.4 bits (67), Expect = 5.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 153 WTCSVCTYENWAKAKRCVVCDHPR 176
W+C CT+ N A ++C +C+ PR
Sbjct: 7 WSCVRCTFLNPAGQRQCSICEAPR 30
>gi|157388969 nei endonuclease VIII-like 3 [Homo sapiens]
Length = 605
Score = 38.9 bits (89), Expect = 0.017
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 70 SSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRP 129
SS V S + ++ W+C +CT +N P + C CL+ R S +S ++S S
Sbjct: 303 SSRVDHVMDSVARKSEEHWTCVVCTLINKPSSKACDACLTSRPIDSVLKSEENSTVFSHL 362
Query: 130 VAFSVDPCEEYNDRNKLNTRTQHWTCSV 157
+ + + + + K+N +T T ++
Sbjct: 363 MKYPCNTFGKPHTEVKINRKTAFGTTTL 390
Score = 33.9 bits (76), Expect = 0.53
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 151 QHWTCSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIIN 196
+HWTC VCT N +K C C RP + + ++EE S++ +
Sbjct: 319 EHWTCVVCTLINKPSSKACDACLTSRPID----SVLKSEENSTVFS 360
Score = 30.8 bits (68), Expect = 4.5
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQRPSGTIITED 40
W C CT N PS+ C C RP +++ +
Sbjct: 321 WTCVVCTLINKPSSKACDACLTSRPIDSVLKSE 353
>gi|60218897 YY1 associated factor 2 [Homo sapiens]
Length = 180
Score = 36.6 bits (83), Expect = 0.082
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 152 HWTCSVCTYENWAKAKRCVVCD 173
+W CSVCT+ N A+A +C++CD
Sbjct: 22 YWDCSVCTFRNSAEAFKCMMCD 43
Score = 32.3 bits (72), Expect = 1.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQRPSGT 35
W C CT+ N A KC MC ++ + T
Sbjct: 23 WDCSVCTFRNSAEAFKCMMCDVRKGTST 50
Score = 30.0 bits (66), Expect = 7.7
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 70 SSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQS 122
S RP+ + S + W C +CT+ N A +C C ++ T + P S
Sbjct: 6 SPTRPKRQPKPSSDEGY-WDCSVCTFRNSAEAFKCMMCDVRKGTSTRKPRPVS 57
>gi|14149669 mitogen-activated protein kinase kinase kinase 7
interacting protein 2 [Homo sapiens]
Length = 693
Score = 36.6 bits (83), Expect = 0.082
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 74 PRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQC 107
P+ + + E A +W+C CT+LN P IRC QC
Sbjct: 655 PKTQDTEDDEGA-QWNCTACTFLNHPALIRCEQC 687
Score = 33.1 bits (74), Expect = 0.91
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 3 ERGIKWACEYCTYENWPSAIKCTMCRAQR 31
+ G +W C CT+ N P+ I+C C R
Sbjct: 663 DEGAQWNCTACTFLNHPALIRCEQCEMPR 691
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 36.6 bits (83), Expect = 0.082
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 28/135 (20%)
Query: 88 WSC--HMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNK 145
W C C +N+ R C +C ++ T + + G + ++++
Sbjct: 13 WICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----------KTLAEKSR 61
Query: 146 LNTRTQHWTCSVCTYENWAKAKRCVVCDHPRP-------------NNIEAIELAETEEAS 192
W C C+ NWA+ C +C+ P+ N E +E E EE+
Sbjct: 62 GLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESD 121
Query: 193 SIINE--QDRARWRG 205
+E + + ++RG
Sbjct: 122 GEYDEFGRKKKKYRG 136
Score = 34.3 bits (77), Expect = 0.41
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 77 KSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSR 128
+ S + +AN W C C+ +NW R C C + + + + G R
Sbjct: 58 EKSRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNER 109
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 36.6 bits (83), Expect = 0.082
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 28/135 (20%)
Query: 88 WSC--HMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEYNDRNK 145
W C C +N+ R C +C ++ T + + G + ++++
Sbjct: 13 WICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIG-----------KTLAEKSR 61
Query: 146 LNTRTQHWTCSVCTYENWAKAKRCVVCDHPRP-------------NNIEAIELAETEEAS 192
W C C+ NWA+ C +C+ P+ N E +E E EE+
Sbjct: 62 GLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREESD 121
Query: 193 SIINE--QDRARWRG 205
+E + + ++RG
Sbjct: 122 GEYDEFGRKKKKYRG 136
Score = 34.3 bits (77), Expect = 0.41
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 77 KSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSR 128
+ S + +AN W C C+ +NW R C C + + + + G R
Sbjct: 58 EKSRGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNER 109
>gi|112363092 RING1 and YY1 binding protein [Homo sapiens]
Length = 228
Score = 36.2 bits (82), Expect = 0.11
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 23/110 (20%)
Query: 153 WTCSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSGNS 212
W CSVCT+ N A+A +C +CD + T IN Q A+
Sbjct: 25 WDCSVCTFRNSAEAFKCSICDVRK----------GTSTRKPRINSQLVAQ------QVAQ 68
Query: 213 QRRSPPATKRDSEVKMDFQRIELAGAVGSKEELEVDFKKLKQIKNRMKKT 262
Q +PP K++ + K++ Q E K E + + KN KKT
Sbjct: 69 QYATPPPPKKEKKEKVEKQDKE-------KPEKDKEISPSVTKKNTNKKT 111
Score = 31.6 bits (70), Expect = 2.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQRPSGT 35
W C CT+ N A KC++C ++ + T
Sbjct: 25 WDCSVCTFRNSAEAFKCSICDVRKGTST 52
>gi|62860046 zinc finger, RAN-binding domain containing 3 [Homo
sapiens]
Length = 1079
Score = 36.2 bits (82), Expect = 0.11
Identities = 47/231 (20%), Positives = 83/231 (35%), Gaps = 65/231 (28%)
Query: 24 CTMCRAQRPSGTIITEDPFKSGSSDV---GRDWDP-------SSTEGGSSPLI-CPDSSA 72
C + R T+++ DP K+ + D+ D +P +++E SP P S
Sbjct: 539 CDESKRFREENTVVSSDPTKTAARDIIDYESDVEPETKRLKLAASEDHCSPSEETPSQSK 598
Query: 73 RPRVKSSYSMENANK-----------WSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQ 121
+ R S++ A W C +CTY+N C C E+PQ
Sbjct: 599 QIRTPLVESVQEAKAQLTTPAFPVEGWQCSLCTYINNSELPYCEMC----------ETPQ 648
Query: 122 SSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNIE 181
S +D D+N+ + + + V T + C+ E
Sbjct: 649 GS------AVMQIDSLNHIQDKNEKDDSQKDTSKKVQTISD---------CEKQALAQSE 693
Query: 182 AIELAETEEASSIINEQD-------RARWRGS-----------CSSGNSQR 214
+LA+++E + I ++D +W+ S C+S N+ R
Sbjct: 694 PGQLADSKEETPKIEKEDGLTSQPGNEQWKSSDTLPVYDTLMFCASRNTDR 744
>gi|98991767 mitogen-activated protein kinase kinase kinase 7
interacting protein 3 [Homo sapiens]
Length = 712
Score = 35.0 bits (79), Expect = 0.24
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 70 SSARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRT 113
S+ PR + W+C CT+LN P RC QC R T
Sbjct: 669 STQSPRTQPRDEDYEGAPWNCDSCTFLNHPALNRCEQCEMPRYT 712
Score = 30.0 bits (66), Expect = 7.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 5 GIKWACEYCTYENWPSAIKCTMCRAQR 31
G W C+ CT+ N P+ +C C R
Sbjct: 684 GAPWNCDSCTFLNHPALNRCEQCEMPR 710
>gi|118918415 shank-interacting protein-like 1 [Homo sapiens]
Length = 387
Score = 34.7 bits (78), Expect = 0.31
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSS 47
W+C CT+ N P C MC QRP T DP + S+
Sbjct: 352 WSCPSCTFINAPDRPGCEMCSTQRP----CTWDPLAAAST 387
Score = 30.8 bits (68), Expect = 4.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 88 WSCHMCTYLNWPRAIRCTQCLSQR 111
WSC CT++N P C C +QR
Sbjct: 352 WSCPSCTFINAPDRPGCEMCSTQR 375
>gi|30578416 ring finger protein 113B [Homo sapiens]
Length = 322
Score = 34.3 bits (77), Expect = 0.41
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 124 GSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHP 175
GS + F C + +N + T+ +H+ C C E++ RC +CD P
Sbjct: 246 GSEEEEIPFRCFICRQAF-QNPVVTKCRHYFCESCALEHFRATPRCYICDQP 296
>gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens]
Length = 171
Score = 33.9 bits (76), Expect = 0.53
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 24/106 (22%)
Query: 391 PPTVQEKLFDEVLDRDVQKELE-------EESPIINWSLELATRLDSRLYA-------LW 436
PP FD+ D D+ E++ +E + NWS + L RL A LW
Sbjct: 7 PPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSKGDSYVLAKRLAAFCPCPRDLW 66
Query: 437 N----RTAGDCLLD------SVLQATWGIYDKDSVLRKALHDSLHD 472
N R +CL++ S+ + TW + + +R+A+H SL +
Sbjct: 67 NSEMERDDLECLVEEISKQQSIQEVTWALLKSFNFIREAVHKSLEN 112
>gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo
sapiens]
Length = 171
Score = 33.9 bits (76), Expect = 0.53
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 24/106 (22%)
Query: 391 PPTVQEKLFDEVLDRDVQKELE-------EESPIINWSLELATRLDSRLYA-------LW 436
PP FD+ D D+ E++ +E + NWS + L RL A LW
Sbjct: 7 PPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSKGDSYVLAKRLAAFCPCPRDLW 66
Query: 437 N----RTAGDCLLD------SVLQATWGIYDKDSVLRKALHDSLHD 472
N R +CL++ S+ + TW + + +R+A+H SL +
Sbjct: 67 NSEMERDDLECLVEEISKQQSIQEVTWALLKSFNFIREAVHKSLEN 112
>gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo
sapiens]
Length = 171
Score = 33.9 bits (76), Expect = 0.53
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 24/106 (22%)
Query: 391 PPTVQEKLFDEVLDRDVQKELE-------EESPIINWSLELATRLDSRLYA-------LW 436
PP FD+ D D+ E++ +E + NWS + L RL A LW
Sbjct: 7 PPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSKGDSYVLAKRLAAFCPCPRDLW 66
Query: 437 N----RTAGDCLLD------SVLQATWGIYDKDSVLRKALHDSLHD 472
N R +CL++ S+ + TW + + +R+A+H SL +
Sbjct: 67 NSEMERDDLECLVEEISKQQSIQEVTWALLKSFNFIREAVHKSLEN 112
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 181 EAIELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVG 240
E +E E EE S + N+ R SS + R+SP + DS++ D ++E V
Sbjct: 128 EDLEDLEEEEVSDMGNDDPEMGERAENSSKSDLRKSPVFSDEDSDLDFDISKLEQQSKVQ 187
Query: 241 SK 242
+K
Sbjct: 188 NK 189
>gi|5902158 ring finger protein 113A [Homo sapiens]
Length = 343
Score = 32.7 bits (73), Expect = 1.2
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 124 GSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCD 173
GS + F C + + +N + T+ +H+ C C +++ RC VCD
Sbjct: 252 GSDDEEIPFKCFICRQ-SFQNPVVTKCRHYFCESCALQHFRTTPRCYVCD 300
>gi|157426879 nuclear protein localization 4 [Homo sapiens]
Length = 608
Score = 32.7 bits (73), Expect = 1.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 8 WACEYCTYENWPSAIKCTMCRAQR 31
WAC++CT+ N P C MC R
Sbjct: 584 WACQHCTFMNQPGTGHCEMCSLPR 607
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 183 IELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVGSK 242
+ L T +A +E+D +G +G +RR RD+EV+ D +R + AV ++
Sbjct: 1588 LRLEVTVQALKTQHERDL---QGRDEAGEERRRQLAKQLRDAEVERDEERKQRTLAVAAR 1644
Query: 243 EELEVDFKKLK 253
++LE + ++LK
Sbjct: 1645 KKLEGELEELK 1655
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 183 IELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVGSK 242
+ L T +A +E+D +G +G +RR RD+EV+ D +R + AV ++
Sbjct: 1580 LRLEVTVQALKTQHERDL---QGRDEAGEERRRQLAKQLRDAEVERDEERKQRTLAVAAR 1636
Query: 243 EELEVDFKKLK 253
++LE + ++LK
Sbjct: 1637 KKLEGELEELK 1647
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 32.3 bits (72), Expect = 1.6
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 183 IELAETEEASSIINEQDRARWRGSCSSGNSQRRSPPATKRDSEVKMDFQRIELAGAVGSK 242
+ L T +A +E+D +G +G +RR RD+EV+ D +R + AV ++
Sbjct: 1621 LRLEVTVQALKTQHERDL---QGRDEAGEERRRQLAKQLRDAEVERDEERKQRTLAVAAR 1677
Query: 243 EELEVDFKKLK 253
++LE + ++LK
Sbjct: 1678 KKLEGELEELK 1688
>gi|156104874 envoplakin [Homo sapiens]
Length = 2033
Score = 32.3 bits (72), Expect = 1.6
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 386 DIEDLPPTVQEK-LFDEVLDRDVQKELEEESPIINWSLE 423
++E PPTVQEK + +EV+ + +LE+ + + W L+
Sbjct: 1448 ELEKRPPTVQEKIIMEEVVKLEKDPDLEKSTEALRWDLD 1486
>gi|148612849 kinesin heavy chain member 2 isoform 2 [Homo sapiens]
Length = 744
Score = 32.3 bits (72), Expect = 1.6
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 115 SPTESPQSSGSGSRPVAFSVDPCEEYNDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDH 174
SP++ P S GSGSRP + P EY+D + TR + T + A + H
Sbjct: 556 SPSDIPFSQGSGSRP---DLSPSYEYDDFSPSVTRVKE-----LTVDPTAAGDVRPIMHH 607
Query: 175 PRPNNIEAIE 184
P PN I+ +E
Sbjct: 608 P-PNQIDDLE 616
>gi|75677374 SLIT-ROBO Rho GTPase activating protein 3 isoform b
[Homo sapiens]
Length = 1075
Score = 31.6 bits (70), Expect = 2.6
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 415 SPIINWSLEL-ATRLDSRLYALWNRTAGDCLLDSVL-------QATWGIYDKDSVLRKAL 466
SP+ W L L TR +SR +A T D +++V+ + ++ K + +
Sbjct: 94 SPVNCWYLVLHQTRRESRDHA----TLNDIFMNNVIVRLSQISEDVIRLFKKSKEIGLQM 149
Query: 467 HDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQEDWAF 509
H+ L ++ YT K + ++++S L+E + QE+ F
Sbjct: 150 HEELLKVTNELYTVMKTYHMYHAESISAESKLKEAEKQEEKQF 192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,816,547
Number of Sequences: 37866
Number of extensions: 1339841
Number of successful extensions: 4589
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 4465
Number of HSP's gapped (non-prelim): 93
length of query: 708
length of database: 18,247,518
effective HSP length: 109
effective length of query: 599
effective length of database: 14,120,124
effective search space: 8457954276
effective search space used: 8457954276
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.