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Search of human proteins with 11056065
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11056065 protocadherin gamma subfamily A, 6 isoform 1
precursor [Homo sapiens]
(932 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1833 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1580 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1414 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1412 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1412 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1389 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1387 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1387 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1375 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1375 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1371 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1358 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1333 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1161 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1160 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1158 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1136 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1134 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1133 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1127 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1125 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1118 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1105 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1085 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 941 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 931 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 926 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 919 0.0
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 915 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 913 0.0
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1833 bits (4749), Expect = 0.0
Identities = 932/932 (100%), Positives = 932/932 (100%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1580 bits (4090), Expect = 0.0
Identities = 810/817 (99%), Positives = 812/817 (99%), Gaps = 2/817 (0%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQA--PPNTD 815
NQESYEKSEPLLITQDLLETKGEPRQLQ + PP +
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKRE 817
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1414 bits (3661), Expect = 0.0
Identities = 717/932 (76%), Positives = 797/932 (85%), Gaps = 1/932 (0%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA P P + + + LLG L A QI YS+ EE E+GS VGNI KDLGL P+ELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRIVSRGR QLF+LNPR+G+LVTAGRIDREELC +SP C+ + IL+ED + + VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEI+D+NDN P F E+ E+K+ EN P +RFPL E +DPDVG+NSLQG++L+ N +FS+
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DVQS A G KYPELVLE LDRE EAV+ LVLTA DGGDPVRS A+IL+ ++D NDN P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+FTQP Y VSV EN+PVGT +L V ATD DEG +G+VTYSF K+ +KISQ+F LN L+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
I+ LDYEDS FY++ VEA DGPGLR R+KVL+T+LD NDN PEV VTS + ++ ES+
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGTVIALF V D DSG NGLVTCSIP +LPF LEK+ GNYYRL+T+ LDREEV YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATD+GTPPLSTET ISL V D NDNPPTFPH+SYS Y+ ENNPRGASI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
NA+++YSLAEDT QGAPLSSYVSINS+TGILYAL SFDYEQ RDLQL +TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVAD IPD+LADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+L+RWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLL A G LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
++ES EKSEPLLITQDLLETKG+P LQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDP-NLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1412 bits (3656), Expect = 0.0
Identities = 717/918 (78%), Positives = 792/918 (86%)
Query: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
LL LLGTL + QIRYS+ EEL+KGSFVGNI DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
Query: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
FSLNP++GSLVTA RIDREELCAQ P CLV NILVEDKL ++ VE+EI DINDN P F
Sbjct: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
EELE+KI E P +RFP+ +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
VLE LDRE + +++LVL A DGGDPV S I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
+PVGT +L V ATD DEG + +V+Y K+ KI++IF LN ++GE+S +LDYED+ F
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
YE+ +EA+DGPGL RAK+L+T+LDVNDN PE+ +TS + ++ E G IAL V DR
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
DSG NG V + +LPF+LEKS+ YYRLVT +LDRE++ YNI++ A+D G+PPLST
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794
Query: 795 QDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
QDLLE KG+ LQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
Sbjct: 795 QDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
Query: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
Sbjct: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
Query: 915 APAGGNGNKKKSGKKEKK 932
APAGGNGNKKKSGKKEKK
Sbjct: 915 APAGGNGNKKKSGKKEKK 932
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1412 bits (3654), Expect = 0.0
Identities = 718/918 (78%), Positives = 798/918 (86%)
Query: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
LL LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
Query: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
EE+ VKI+EN AP RFPL E DPDVG NSLQ ++LS N HFS+ VQS KYPEL
Sbjct: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
VLE LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
+PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST LDYE+++F
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
YE+ V+A+DGPG +AKVLIT+LDVNDN PEV +TS S +I E P GTVIALF + DR
Sbjct: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
DSG NG VTC+IP +LPF+LEKS+ NYYRLVT LDRE + LYNIT+ ATD GTPPLS
Sbjct: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
LGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
+P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
Query: 795 QDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
D E K +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
Sbjct: 795 VDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
Query: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
Sbjct: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
Query: 915 APAGGNGNKKKSGKKEKK 932
APAGGNGNKKKSGKKEKK
Sbjct: 915 APAGGNGNKKKSGKKEKK 932
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1389 bits (3596), Expect = 0.0
Identities = 705/932 (75%), Positives = 788/932 (84%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA PQ P+R E +LL LLGTLW QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
+HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK L+ VE
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
+EI+DINDN P+F E+LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DVQ+ +G PELVLE LDRE EA + LVLTA DGG P RSS +I VTVLD NDN P
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+F P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN TGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IS + +LDYE+ SFYE+ ++A D L R K+LI++ DVNDN PEV++TS + E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGTVIA V D+DSG NG V C +LPF+LEKS+GNYYRLVT LDRE V +YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
+NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVAD IP++L +LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQ SGG L +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+QE EK++ LL + D E K E QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1387 bits (3591), Expect = 0.0
Identities = 706/932 (75%), Positives = 779/932 (83%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA Q+ P + VLL LL TLW A A QIRYS+ EE+++GSFVGNI KDLGLEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRIVSRGR QLF+LNPR+GSLVTA RIDREELCAQS CL++FNIL+EDKL +Y VE
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEI DINDN PRF EELE+KI E P R PL +D DVG N+LQ + L+ N HFS+
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DV+ A G KYPELVLE +LDRE EAV+ LVL A DGGDPV S ++I V VLD NDN P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+FTQP YR+S+PEN VGT +L VTATD DEG + +V Y K + S++F L +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
++ +LDYED++F+E+ +EA+DGPGL RAKV++T+LDVNDN PE +TS + +++E +
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGT+I LF V DRDSG N TCS+P LPF+LEKSV NYYRLVT ALDRE+ YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
T+TA D G P LST+ I L VAD NDN P F +SYS Y+ ENNPRGAS+FSV A DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
+ NA V+YS AEDT+QGAPLSSY+SINSDTG+LYALRSFDYEQLRDLQ+WV A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVADRIPDILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGG L M SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+QES EK + L Q LLE + E QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1387 bits (3591), Expect = 0.0
Identities = 714/932 (76%), Positives = 788/932 (84%), Gaps = 1/932 (0%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA P R E +L LLGTL + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEI+DINDN PRF EEL+VK+ ENAA +R L D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DV S G KYPELVLE LDRE E V+ L+LTA+DGGDPV S I VTVLD NDN P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+FT Y VSVPEN+PVGT +L +TATD DEG++G++TYSF EKIS+ F L+ GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IST +LDYE+S FY + V A+DG L AKV++T+ DVNDN PEV++TS + +I+E
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T LDREE YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
T+T D GTPPLSTE+ I L VAD NDNPP FP +SYS V ENNPRG SIFSV A DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVADRIPDILADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQA G LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
++ES EKSEPLL++ D ++ E R++QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1375 bits (3559), Expect = 0.0
Identities = 705/919 (76%), Positives = 769/919 (83%)
Query: 14 VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
VLL G W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 18 VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
Query: 74 LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 78 LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
Query: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
E L+VKI EN A RFPL E DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
Query: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
LVLE +LDRE EA++ LVLTA DGGDP+RS + VTV D NDN P+FT P YRVSVPE
Sbjct: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
Query: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
NLPVGT +L VTATD+DEG +GEVTYSF K+ + F LN TGEI S NLDYE++
Sbjct: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
Query: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
FYE+ ++A DG AKVLIT+ DVNDN PE+ +TS + E +P GTV+AL V D
Sbjct: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
Query: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
DS NG VTCSI LPF+LEKS+ +YYRLV + ALDRE+V YNITVTATD G+PPLS
Sbjct: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
Query: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
TE L VAD NDNPPTF SY Y+ ENN RGASIFSV ALDPD +NAQ+ YSLAE
Sbjct: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
Query: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
DT+QG PLSSY+SINSDTG+LYALRSFDYEQ +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
Query: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
DLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL
Sbjct: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
Query: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793
+ GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797
Query: 794 TQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 853
D + + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL
Sbjct: 798 LDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 857
Query: 854 ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG 913
ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG
Sbjct: 858 ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG 917
Query: 914 KAPAGGNGNKKKSGKKEKK 932
KAPAGGNGNKKKSGKKEKK
Sbjct: 918 KAPAGGNGNKKKSGKKEKK 936
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1375 bits (3559), Expect = 0.0
Identities = 706/922 (76%), Positives = 776/922 (84%), Gaps = 1/922 (0%)
Query: 11 SEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRG 70
S +LL L L A A I YS+PEE +KGSFVGNI KDLGL+PQELA+ GVRIVSRG
Sbjct: 11 SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70
Query: 71 RMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNT 130
RM LF+LNPR+GSL+TA RIDREELCAQS CLVSFNILVEDK+ L+PVEVEI+DINDNT
Sbjct: 71 RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130
Query: 131 PRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPK 190
P+F EELE K+ E P +R L D DVGMNSLQ ++LS N HFS+DVQ A GP+
Sbjct: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190
Query: 191 YPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVS 250
+PE+VL+ LDRE EAV+ L+LTA DGG+PVRS +I + V+D NDN P FTQ Y ++
Sbjct: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250
Query: 251 VPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYE 310
VPEN+P+GT +L V ATD DEG +GEVTYSF + +++QIF L+ TGEIS LD+E
Sbjct: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310
Query: 311 DSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQ 370
+ Y + V+A+DG GL + KVLI +LDVNDN PEV +TS + + E+ PPGT+IAL
Sbjct: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370
Query: 371 VFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTP 430
V D+DSG NG TC IP +LPF+LEK V NYYRLVT LDRE + YNIT+TA D+GTP
Sbjct: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430
Query: 431 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYS 490
LSTET ISL V D NDN P F SYS Y+ ENNPRGASIFSV A D D ++NAQ++YS
Sbjct: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490
Query: 491 LAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSL 550
L EDT+QGAPLS+Y+SINSDTG+LYALRSFDYEQ RD+QL V A DSGDPPLSSNVSLSL
Sbjct: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
F+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLK
Sbjct: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGG 730
ILADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RL+RWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 731 GLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEP 790
GLASMPGSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK
Sbjct: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790
Query: 791 LLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
L Q LLE K EP QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 791 LSAPQSLLEDKKEPFS-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 849
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 850 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 909
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 910 RDGKAPAGGNGNKKKSGKKEKK 931
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1371 bits (3548), Expect = 0.0
Identities = 698/932 (74%), Positives = 783/932 (84%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
M P + H VLL LLGTLW QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC + +C ++ +IL+EDK+ +Y VE
Sbjct: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VE+ DINDN P F + ELE+KI ENAA RFPL +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
VQ+ A G KYPELVL+ LDRE +A + LVLTA DGGDPVR+ A+I V VLD NDN P
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF + +K +Q+F L+ +G
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IST LD+E+S FY++ V+A D G RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
P GT+IAL V D+DS NG V C I +LPF+LEKS GNYY LVT+ LDRE+V YNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVAD IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGL P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+QES+EKSEPLL++ D + +K ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1358 bits (3515), Expect = 0.0
Identities = 691/935 (73%), Positives = 782/935 (83%), Gaps = 3/935 (0%)
Query: 1 MAPPQRHPQRSEQVLLLTL-LGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQEL 59
MA + RS +LLL + LGTL G A QIRYS+PEE EKGSFVGNI KDLGLEP+EL
Sbjct: 1 MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60
Query: 60 AEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPV 119
A+ GVRIVSRG+ QLF++NPR+GSL+TAGRIDREELC C ++ +LVED L +Y V
Sbjct: 61 AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120
Query: 120 EVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFS 179
EVEI+DINDN P F ++E+E+K+ E+A P +RF L DPDVG+NSLQ ++LS N++FS
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180
Query: 180 VDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNT 239
+ ++ G K PELVLEG+LDRE EA + L+LTA+DGGDP+R I V VLDVND+
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240
Query: 240 PMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTG 299
PMFTQ VYRVSVPEN+ GT VL V ATD DEG++GEV YSF + K S+IF L+ TG
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300
Query: 300 EISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAES 359
E+ +LD+E FYE+ ++ +DG GL +LIT++DVNDN PE+ +TS +I E+
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360
Query: 360 APPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYN 419
+PPGTVIAL V D+DSG NG V+C IP LPF+LEK+ GNYY+L+T+ LDRE V YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420
Query: 420 ITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDP 479
IT+TATD+G+PPLS ET + LNVAD NDNPP FPHSSYS Y+ ENNPRGASIFSV ALDP
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480
Query: 480 DVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGD 539
D QNA V+YSL +DT+QG PLSSYVSINS+TG+LYAL+SFDYEQ RDL+L V A DSGD
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540
Query: 540 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599
PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
Query: 600 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 659
QNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660
Query: 660 LTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRW 719
LTVAVAD IP++LADLGSLE A SDL+LYLVVAVAAVSC+FL FVIVLLALRL RW
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720
Query: 720 HKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL 779
HKSRLLQAS GGLA MP SHFVGV+GV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL
Sbjct: 721 HKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTL 780
Query: 780 INQESYEKSEPLLITQD--LLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGT 837
I+QES EKSEPLLI +D ++ K +P QQAPPNTDWRFSQAQRPGTSGSQNGDDTGT
Sbjct: 781 ISQESCEKSEPLLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGT 840
Query: 838 WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI 897
WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI
Sbjct: 841 WPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI 900
Query: 898 PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 935
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1333 bits (3451), Expect = 0.0
Identities = 687/932 (73%), Positives = 766/932 (82%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA P + R VLL +LLG LW A A+QIRYS+PEE EKG VGNI KDL LEP+ELA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
+E+ DIND+ P+F E LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
+VQ+ +G PELVLE LDRE + LVLTA DGG+P RSS +I VTVLD NDN P
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+F Q +YRV V EN+P GT +L TA+D DEG++G+V Y F KI EK S +F LN TGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IST+ +LDYE+ SFYE+ ++A DG GL+ KVLI++ DVNDN PEV +TS + E A
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
P GTVI LF DRDSG NG V CSI +L F LE S +YYRL+T LDRE+ YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATD+GTPPLSTE I+L V D NDNPP F +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVA+AD IPDILADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
S LL+A+ GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+Q+S EK+EPL ++ D + + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1161 bits (3004), Expect = 0.0
Identities = 591/804 (73%), Positives = 671/804 (83%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA P P + + + LLG L A QI YS+ EE E+GS VGNI KDLGL P+ELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRIVSRGR QLF+LNPR+G+LVTAGRIDREELC +SP C+ + IL+ED + + VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEI+D+NDN P F E+ E+K+ EN P +RFPL E +DPDVG+NSLQG++L+ N +FS+
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DVQS A G KYPELVLE LDRE EAV+ LVLTA DGGDPVRS A+IL+ ++D NDN P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+FTQP Y VSV EN+PVGT +L V ATD DEG +G+VTYSF K+ +KISQ+F LN L+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
I+ LDYEDS FY++ VEA DGPGLR R+KVL+T+LD NDN PEV VTS + ++ ES+
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGTVIALF V D DSG NGLVTCSIP +LPF LEK+ GNYYRL+T+ LDREEV YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATD+GTPPLSTET ISL V D NDNPPTFPH+SYS Y+ ENNPRGASI S+ A DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
NA+++YSLAEDT QGAPLSSYVSINS+TGILYAL SFDYEQ RDLQL +TASDSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVAD IPD+LADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+L+RWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLL A G LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGEP 804
++ES EKSEPLLITQDLLETKG+P
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDP 804
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1160 bits (3000), Expect = 0.0
Identities = 595/797 (74%), Positives = 676/797 (84%)
Query: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
LL LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
Query: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
EE+ VKI+EN AP RFPL E DPDVG NSLQ ++LS N HFS+ VQS KYPEL
Sbjct: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
VLE LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
+PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST LDYE+++F
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
YE+ V+A+DGPG +AKVLIT+LDVNDN PEV +TS S +I E P GTVIALF + DR
Sbjct: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
DSG NG VTC+IP +LPF+LEKS+ NYYRLVT LDRE + LYNIT+ ATD GTPPLS
Sbjct: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
LGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
+P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
Query: 795 QDLLETKGEPRQLQQAP 811
D E K +Q +P
Sbjct: 795 VDFQECKENLPSIQVSP 811
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1158 bits (2996), Expect = 0.0
Identities = 593/794 (74%), Positives = 668/794 (84%)
Query: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
LL LLGTL + QIRYS+ EEL+KGSFVGNI DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
Query: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
FSLNP++GSLVTA RIDREELCAQ P CLV NILVEDKL ++ VE+EI DINDN P F
Sbjct: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
Query: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
EELE+KI E P +RFP+ +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
Query: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
VLE LDRE + +++LVL A DGGDPV S I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
Query: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
+PVGT +L V ATD DEG + +V+Y K+ KI++IF LN ++GE+S +LDYED+ F
Sbjct: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
Query: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
YE+ +EA+DGPGL RAK+L+T+LDVNDN PE+ +TS + ++ E G IAL V DR
Sbjct: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
Query: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
DSG NG V + +LPF+LEKS+ YYRLVT +LDRE++ YNI++ A+D G+PPLST
Sbjct: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
Query: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
Query: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
Query: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794
Query: 795 QDLLETKGEPRQLQ 808
QDLLE KG+ LQ
Sbjct: 795 QDLLEMKGDSNLLQ 808
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1136 bits (2938), Expect = 0.0
Identities = 580/803 (72%), Positives = 663/803 (82%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA PQ P+R E +LL LLGTLW QIRYS+PEE +KGSFVGNI KDLGL+P++LA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
+HGVRIVSRGR QLF+LNPR+GSL+TAGRIDREELCAQSPRCL++ N LVEDK L+ VE
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
+EI+DINDN P+F E+LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DVQ+ +G PELVLE LDRE EA + LVLTA DGG P RSS +I VTVLD NDN P
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+F P+YRV V EN+P GT +L VTA+D DEG++G+V Y F KI EK + +F LN TGE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IS + +LDYE+ SFYE+ ++A D L R K+LI++ DVNDN PEV++TS + E++
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGTVIA V D+DSG NG V C +LPF+LEKS+GNYYRLVT LDRE V +YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TV A+D GTPPLSTET I+L+VAD NDNPPTFPH+SYS Y+LENN RGASIFS+ A DPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
+NAQV+YS+ EDTLQGAPLSSY+SINSDTG+LYAL+SFDYEQ+RDLQL VTASDSGDP
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSN+SLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVAD IP++L +LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRL+RWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQ SGG L +P SHFVGVE V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LI
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGE 803
+QE EK++ LL + D E K E
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1134 bits (2933), Expect = 0.0
Identities = 581/803 (72%), Positives = 654/803 (81%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA Q+ P + VLL LL TLW A A QIRYS+ EE+++GSFVGNI KDLGLEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRIVSRGR QLF+LNPR+GSLVTA RIDREELCAQS CL++FNIL+EDKL +Y VE
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEI DINDN PRF EELE+KI E P R PL +D DVG N+LQ + L+ N HFS+
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DV+ A G KYPELVLE +LDRE EAV+ LVL A DGGDPV S ++I V VLD NDN P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+FTQP YR+S+PEN VGT +L VTATD DEG + +V Y K + S++F L +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
++ +LDYED++F+E+ +EA+DGPGL RAKV++T+LDVNDN PE +TS + +++E +
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGT+I LF V DRDSG N TCS+P LPF+LEKSV NYYRLVT ALDRE+ YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
T+TA D G P LST+ I L VAD NDN P F +SYS Y+ ENNPRGAS+FSV A DPD
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
+ NA V+YS AEDT+QGAPLSSY+SINSDTG+LYALRSFDYEQLRDLQ+WV A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVADRIPDILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGG L M SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 NQESYEKSEPLLITQDLLETKGE 803
+QES EK + L Q LLE + E
Sbjct: 781 SQESCEKKDFLSAPQSLLEEERE 803
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1133 bits (2931), Expect = 0.0
Identities = 590/808 (73%), Positives = 664/808 (82%), Gaps = 1/808 (0%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA P R E +L LLGTL + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VEI+DINDN PRF EEL+VK+ ENAA +R L D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
DV S G KYPELVLE LDRE E V+ L+LTA+DGGDPV S I VTVLD NDN P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+FT Y VSVPEN+PVGT +L +TATD DEG++G++TYSF EKIS+ F L+ GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IST +LDYE+S FY + V A+DG L AKV++T+ DVNDN PEV++TS + +I+E
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T LDREE YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
T+T D GTPPLSTE+ I L VAD NDNPP FP +SYS V ENNPRG SIFSV A DPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVADRIPDILADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQA G LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQLQ 808
++ES EKSEPLL++ D ++ E R++Q
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQ 807
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1127 bits (2915), Expect = 0.0
Identities = 581/783 (74%), Positives = 643/783 (82%)
Query: 14 VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
VLL G W A A QI YSIPEELEKGSFVGNI KDLGL P+ELAE GVRIVSRGR Q
Sbjct: 18 VLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGRTQ 77
Query: 74 LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
LFSLNPR+GSL+TAGRIDREELCAQS RC+VSFNILVED++ L+ +E+E+ DINDN P+F
Sbjct: 78 LFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAPKF 137
Query: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
E L+VKI EN A RFPL E DPDVG+NSLQ ++LS N HFS+ VQS A+G KYPE
Sbjct: 138 QAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKYPE 197
Query: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
LVLE +LDRE EA++ LVLTA DGGDP+RS + VTV D NDN P+FT P YRVSVPE
Sbjct: 198 LVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSVPE 257
Query: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
NLPVGT +L VTATD+DEG +GEVTYSF K+ + F LN TGEI S NLDYE++
Sbjct: 258 NLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEETG 317
Query: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
FYE+ ++A DG AKVLIT+ DVNDN PE+ +TS + E +P GTV+AL V D
Sbjct: 318 FYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNVHD 377
Query: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
DS NG VTCSI LPF+LEKS+ +YYRLV + ALDRE+V YNITVTATD G+PPLS
Sbjct: 378 LDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPPLS 437
Query: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
TE L VAD NDNPPTF SY Y+ ENN RGASIFSV ALDPD +NAQ+ YSLAE
Sbjct: 438 TEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSLAE 497
Query: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
DT+QG PLSSY+SINSDTG+LYALRSFDYEQ +LQ+ VTASDSGDPPLSSNVSLSLFVL
Sbjct: 498 DTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLFVL 557
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE
Sbjct: 558 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 617
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
PGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +LA
Sbjct: 618 PGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 677
Query: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
DLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RL+RWHKSRLLQASGGGL
Sbjct: 678 DLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLT 737
Query: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLI 793
+ GSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK++PL +
Sbjct: 738 GVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPLSL 797
Query: 794 TQD 796
D
Sbjct: 798 LDD 800
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1125 bits (2909), Expect = 0.0
Identities = 581/794 (73%), Positives = 651/794 (81%)
Query: 11 SEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRG 70
S +LL L L A A I YS+PEE +KGSFVGNI KDLGL+PQELA+ GVRIVSRG
Sbjct: 11 SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70
Query: 71 RMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNT 130
RM LF+LNPR+GSL+TA RIDREELCAQS CLVSFNILVEDK+ L+PVEVEI+DINDNT
Sbjct: 71 RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130
Query: 131 PRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPK 190
P+F EELE K+ E P +R L D DVGMNSLQ ++LS N HFS+DVQ A GP+
Sbjct: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190
Query: 191 YPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVS 250
+PE+VL+ LDRE EAV+ L+LTA DGG+PVRS +I + V+D NDN P FTQ Y ++
Sbjct: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250
Query: 251 VPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYE 310
VPEN+P+GT +L V ATD DEG +GEVTYSF + +++QIF L+ TGEIS LD+E
Sbjct: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310
Query: 311 DSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQ 370
+ Y + V+A+DG GL + KVLI +LDVNDN PEV +TS + + E+ PPGT+IAL
Sbjct: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370
Query: 371 VFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTP 430
V D+DSG NG TC IP +LPF+LEK V NYYRLVT LDRE + YNIT+TA D+GTP
Sbjct: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430
Query: 431 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYS 490
LSTET ISL V D NDN P F SYS Y+ ENNPRGASIFSV A D D ++NAQ++YS
Sbjct: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490
Query: 491 LAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSL 550
L EDT+QGAPLS+Y+SINSDTG+LYALRSFDYEQ RD+QL V A DSGDPPLSSNVSLSL
Sbjct: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
F+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLK
Sbjct: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGG 730
ILADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RL+RWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 731 GLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEP 790
GLASMPGSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK
Sbjct: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790
Query: 791 LLITQDLLETKGEP 804
L Q LLE K EP
Sbjct: 791 LSAPQSLLEDKKEP 804
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1118 bits (2891), Expect = 0.0
Identities = 574/801 (71%), Positives = 657/801 (82%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
M P + H VLL LLGTLW QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1 MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC + +C ++ +IL+EDK+ +Y VE
Sbjct: 61 ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
VE+ DINDN P F + ELE+KI ENAA RFPL +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
VQ+ A G KYPELVL+ LDRE +A + LVLTA DGGDPVR+ A+I V VLD NDN P
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF + +K +Q+F L+ +G
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IST LD+E+S FY++ V+A D G RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
P GT+IAL V D+DS NG V C I +LPF+LEKS GNYY LVT+ LDRE+V YNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVAVAD IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGL P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
Query: 781 NQESYEKSEPLLITQDLLETK 801
+QES+EKSEPLL++ D + +K
Sbjct: 781 SQESFEKSEPLLLSGDSVFSK 801
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1105 bits (2859), Expect = 0.0
Identities = 570/820 (69%), Positives = 661/820 (80%), Gaps = 7/820 (0%)
Query: 1 MAPPQRHPQRSEQVLLLTL-LGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQEL 59
MA + RS +LLL + LGTL G A QIRYS+PEE EKGSFVGNI KDLGLEP+EL
Sbjct: 1 MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPREL 60
Query: 60 AEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPV 119
A+ GVRIVSRG+ QLF++NPR+GSL+TAGRIDREELC C ++ +LVED L +Y V
Sbjct: 61 AKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGV 120
Query: 120 EVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFS 179
EVEI+DINDN P F ++E+E+K+ E+A P +RF L DPDVG+NSLQ ++LS N++FS
Sbjct: 121 EVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFS 180
Query: 180 VDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNT 239
+ ++ G K PELVLEG+LDRE EA + L+LTA+DGGDP+R I V VLDVND+
Sbjct: 181 LQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHI 240
Query: 240 PMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTG 299
PMFTQ VYRVSVPEN+ GT VL V ATD DEG++GEV YSF + K S+IF L+ TG
Sbjct: 241 PMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300
Query: 300 EISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAES 359
E+ +LD+E FYE+ ++ +DG GL +LIT++DVNDN PE+ +TS +I E+
Sbjct: 301 EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILEN 360
Query: 360 APPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYN 419
+PPGTVIAL V D+DSG NG V+C IP LPF+LEK+ GNYY+L+T+ LDRE V YN
Sbjct: 361 SPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYN 420
Query: 420 ITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDP 479
IT+TATD+G+PPLS ET + LNVAD NDNPP FPHSSYS Y+ ENNPRGASIFSV ALDP
Sbjct: 421 ITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDP 480
Query: 480 DVDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGD 539
D QNA V+YSL +DT+QG PLSSYVSINS+TG+LYAL+SFDYEQ RDL+L V A DSGD
Sbjct: 481 DSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGD 540
Query: 540 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSG 599
PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSG
Sbjct: 541 PPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
Query: 600 QNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 659
QNAWLSYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT
Sbjct: 601 QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVT 660
Query: 660 LTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRW 719
LTVAVAD IP++LADLGSLE A SDL+LYLVVAVAAVSC+FL FVIVLLALRL RW
Sbjct: 661 LTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRW 720
Query: 720 HKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL 779
HKSRLLQAS GGLA MP SHFVGV+GV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL
Sbjct: 721 HKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTL 780
Query: 780 INQESYEKSEPLLITQD--LLETKGEPRQLQ----QAPPN 813
I+QES EKSEPLLI +D ++ K +P Q PPN
Sbjct: 781 ISQESCEKSEPLLIAEDSAIILGKCDPTSNQVRFISLPPN 820
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1085 bits (2807), Expect = 0.0
Identities = 563/796 (70%), Positives = 640/796 (80%)
Query: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
MA P + R VLL +LLG LW A A+QIRYS+PEE EKG VGNI KDL LEP+ELA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
E VRIVSRGR QLFSLNPR+G+LVTAGRIDREELCAQSPRCLV+F +LVED++ LY +E
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
+E+ DIND+ P+F E LEVKI E A P +R+PL E DPDVG+NSLQ ++LS N HFS+
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
+VQ+ +G PELVLE LDRE + LVLTA DGG+P RSS +I VTVLD NDN P
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
+F Q +YRV V EN+P GT +L TA+D DEG++G+V Y F KI EK S +F LN TGE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
IST+ +LDYE+ SFYE+ ++A DG GL+ KVLI++ DVNDN PEV +TS + E A
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
P GTVI LF DRDSG NG V CSI +L F LE S +YYRL+T LDRE+ YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
TVTATD+GTPPLSTE I+L V D NDNPP F +SYSVY+ ENN RG SIFSV A DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
++N++V YSLAEDT+QG+PLS+YVSINSDTG+LYAL SFDYEQ RDLQ+ VTASDSG P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSL LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRL KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
TVA+AD IPDILADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRL+ WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
S LL+A+ GLA +P SHFVGV+GVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 NQESYEKSEPLLITQD 796
+Q+S EK+EPL ++ D
Sbjct: 781 SQQSCEKNEPLCVSVD 796
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 941 bits (2433), Expect = 0.0
Identities = 500/930 (53%), Positives = 644/930 (69%), Gaps = 23/930 (2%)
Query: 13 QVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRM 72
QVLL LL GA QIRYSIPEEL K S VGN+ KDLGL ++L +R+ +
Sbjct: 15 QVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--K 72
Query: 73 QLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPR 132
+ F++NP +G L+ + RIDRE++C + P C++ F+ + E+ LN++ + V + DINDNTP
Sbjct: 73 EYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPL 132
Query: 133 FLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYP 192
F + ++ +KI E+ P + FPL D DVG NSLQ + L+ N +F + + G KYP
Sbjct: 133 FKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYP 192
Query: 193 ELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVP 252
EL+L+ +LDRE ++++LVLTA+DGGDP +S QI + V D NDN P+F+Q VYRV++
Sbjct: 193 ELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLR 252
Query: 253 ENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDS 312
E++P G VL VTATD+DEG++ E+TYSF + E++ F LN TGEI+T +LD+E +
Sbjct: 253 EDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIA 312
Query: 313 SFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVF 372
S Y L +EA+D L + + ILD ND PEV+VTS S + E +PPGTVIAL +
Sbjct: 313 SSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTR 372
Query: 373 DRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPL 432
DRDSG NG V C + + F L+ S NYY+LVT+ ALDREE+ YN+T+TATD G PPL
Sbjct: 373 DRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPL 432
Query: 433 STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLA 492
S+ I++L+++D NDN P F +SY V+V ENNP GASI ++A DPD+ + QVSYS+
Sbjct: 433 SSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIV 492
Query: 493 EDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFV 552
L+ + SYVS+++ +G+++A R+FD+EQLR +L + A D G P LS+NVSL + V
Sbjct: 493 ASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGL 732
DL + P + L YLVVA+A +S +F VI+ ++LRL+ +S GL
Sbjct: 673 PDLSDRREPSDP-QAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGL 731
Query: 733 ASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIF----PQPNYADTLI------NQ 782
+S PG + YS+ + + + S K+ F P+ A L+ Q
Sbjct: 732 SSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWEQ 789
Query: 783 ESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 842
+ + + D + L+QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ
Sbjct: 790 NTNHGAAGVPFASDTI--------LKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 841
Query: 843 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 902
FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
Sbjct: 842 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 901
Query: 903 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 931 bits (2405), Expect = 0.0
Identities = 493/933 (52%), Positives = 641/933 (68%), Gaps = 15/933 (1%)
Query: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
QR QVL LL + IRYSIPEEL KGS VGN+ KDLGL +++ +
Sbjct: 7 QRRRAGPRQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSAREL 66
Query: 65 RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
R VS ++ FS++ ++G L+ RIDRE++C + RC + +VE+ LN++ V V I
Sbjct: 67 R-VSAEKLH-FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIE 124
Query: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
D+ND+ P+F K+E+ ++I E+ + L DPD+ MNSL ++LS N +FS+ +
Sbjct: 125 DVNDHAPQFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKD 184
Query: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
G KYPELVL+ TLDRE ++ + LVLTA+DGGDP RS AQI + V+D NDN P+F+Q
Sbjct: 185 NPDGGKYPELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQ 244
Query: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
VYRVS+ E++P GT +L V ATDQDEG++ E+TYSF + +K +F L+ TG I T
Sbjct: 245 DVYRVSLREDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQ 304
Query: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
LD+E+ Y + +EA+D L R KV++ ++D NDN PE+++TS S I E +PPG
Sbjct: 305 QPLDFEEVERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGV 364
Query: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
V+ALF+ D+DSG NG V CS+ R +PF++ S NYY+LVT+ ALDRE+ YN+T+ A
Sbjct: 365 VVALFKTRDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAA 424
Query: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
TD+G PPLS+ I+L++ D NDN P F S+Y V+V ENN GASI V+A DPD N
Sbjct: 425 TDRGKPPLSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLN 484
Query: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
+VSYSL L+ LSSYVS+++ +G+++A R+FD+EQLR +L + A D G P LS+
Sbjct: 485 GRVSYSLIASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSA 544
Query: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
NVSL + V D+NDNAP +LYPAL DGS + PR+A+PGYLVTKVVAVD DSG NAWL
Sbjct: 545 NVSLRVLVGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWL 604
Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
SY +++ASEPGLFS+GL TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT TL +
Sbjct: 605 SYHVVQASEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVF 664
Query: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRL 724
AD + ++L D S P+ + +++ YLVVA+A +S +FL VI+ +ALRL++
Sbjct: 665 ADSLQEVLPDF-SDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTA 723
Query: 725 LQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL----I 780
L S G VG Y++ + D P+ N+ ++
Sbjct: 724 GDCFESVLCSKSGP--VGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPA 776
Query: 781 NQESYEKSEPLLITQDLLETKGEPRQL-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 839
Q++ K LL + + + + L QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP
Sbjct: 777 TQDNLNKDSMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 836
Query: 840 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 899
NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG
Sbjct: 837 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 896
Query: 900 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 897 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 926 bits (2394), Expect = 0.0
Identities = 499/929 (53%), Positives = 637/929 (68%), Gaps = 6/929 (0%)
Query: 5 QRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGV 64
QR QVL LL + + IRYSIPEEL KGS VGN+ KDLGL +++ +
Sbjct: 7 QRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKL 66
Query: 65 RIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIV 124
R VS ++ FS++ +G L+ RIDRE++C + RC + +VE+ LN++ V V I
Sbjct: 67 R-VSAEKLH-FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIE 124
Query: 125 DINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQS 184
D+ND+ P+F K+E+ ++I E+A+ +R L DPD+ +NS++ +K++ N +FS+ V+
Sbjct: 125 DVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRV 184
Query: 185 EAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQ 244
+ G KYPEL LE LDRE + + L+LTA+DGGDP RS+ A I ++V D NDN P+F++
Sbjct: 185 NSDGGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSR 244
Query: 245 PVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTS 304
YR+S+ ENLP G+PVL VTATDQDEGV+ E+ Y F + +F L+ TG I +
Sbjct: 245 DEYRISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNN 304
Query: 305 ANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGT 364
+ D+ED Y + VEA+DG GL + KV+I ILD NDN PE+++TS S I E++PPG
Sbjct: 305 QSFDFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGM 364
Query: 365 VIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTA 424
V+ALF+ D D G NG V C+I +PF++ S NYY+LVT+ ALDRE+ YN+T+ A
Sbjct: 365 VVALFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVA 424
Query: 425 TDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQN 484
TD+G PPLS+ I+L VAD NDN P F +SY V+V ENNP GASI V+A DPD+ N
Sbjct: 425 TDRGKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLN 484
Query: 485 AQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSS 544
+SYS+ L+ +SSYVS+++ +G+++A R+FD+EQLR L + A D G P LS+
Sbjct: 485 GHISYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSA 544
Query: 545 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 604
NVSL + V D+NDNAP +LYPAL DGS ++ PRSAEPGYLVTKVVAVD DSG NAWL
Sbjct: 545 NVSLRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWL 604
Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
SY +L+ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +
Sbjct: 605 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVF 664
Query: 665 ADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRL 724
AD + +IL DL S P ++L YLVVA+A +S +FL VI+ +ALRL+R
Sbjct: 665 ADNLQEILPDL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPAT 723
Query: 725 LQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYA-DTLINQE 783
GL G +Y+ ++ T + L P ++ + ++
Sbjct: 724 WDCFHPGLCVKSGPVVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSNEDMVCSV 783
Query: 784 SYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
S P +DL T QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 784 SPGALIPPHGGEDL--TSHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 841
Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 842 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 901
Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 919 bits (2376), Expect = 0.0
Identities = 500/920 (54%), Positives = 624/920 (67%), Gaps = 13/920 (1%)
Query: 14 VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
VL L LL A QIRY IPEE+ KGS VGN+ DLG QEL +R+ S
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
F+++ +G L+ + R+DREE+C + P C + F + E+ LN Y V VEI DIND+TP+F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
+ E++I E+A P +RF L D D+G+NSLQ +KLS N FS+ ++ + G KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193
Query: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
L LE TLDRE ++ +RLVLTA+DGG P S ++ + V D NDN P+F + VYRVS+ E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253
Query: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
N+P GT VL V+ATDQDEG++ E+TYSF + QIF LN +GEI+T LD+E++
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFYRT----GQIFSLNSKSGEITTQKKLDFEETK 309
Query: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
Y + VE RDG GL + V I I D NDN PEV S I E+A PGT+IAL ++ D
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369
Query: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
+DSG NG V C + +PF++ S N Y+LVT+ LDRE+ YN+T+TATD+G PPLS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429
Query: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
+ + L++ D NDN P F +SY V V ENNP GASI V A D D+ N QVSYS+
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489
Query: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
L+ L+SYVS+++ +G+++A R+FDYEQLR +L + A D G P LS+NVSL + V
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669
Query: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
D+ P ++L YLVVA+A +S +FL VI+ +ALRL+R GL
Sbjct: 670 DITD-RPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728
Query: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHL-IFPQPNYADTLINQESYEKSEPLL 792
G +Y+ V+ T + + L Q + ++ +S PL
Sbjct: 729 VKSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLC 788
Query: 793 ITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+ E+ P QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 789 NSS---ESTSHPE--LQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 843
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 844 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 903
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 904 GKAPAGGNGNKKKSGKKEKK 923
>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 915 bits (2365), Expect = 0.0
Identities = 501/920 (54%), Positives = 629/920 (68%), Gaps = 13/920 (1%)
Query: 14 VLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQ 73
VL L LL A QIRY IPEE+ KGS VGN+ DLG QEL +R+ S
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRF 133
F+++ +G L+ + R+DREE+C + P C + F + E+ LN Y V VEI DIND+TP+F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 LKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPE 193
+ E++I E+A P +RF L +D D+G N+LQ ++LS + HFS+ + ++ G KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
Query: 194 LVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPE 253
+VL+ LDRE + Y L LTA+D G P SS AQI V V D NDN P+F+Q VYRVS+ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
Query: 254 NLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSS 313
N+ GT VL VTATDQDEGV+ E+T+SF + ++ I+Q F LN TGEI+ LD+E+
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQ-ITQ-FDLNSNTGEITVLNTLDFEEVK 311
Query: 314 FYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFD 373
Y + +EARDG G+ + V + ++D NDN PEV+ S I E A GT IAL +V D
Sbjct: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
Query: 374 RDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLS 433
+DS NG VTC + +PF++ S N Y+LVT+A LDRE+ YNITVTATD+G PPLS
Sbjct: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
Query: 434 TETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAE 493
+ + I+L++ D NDN P F SSY V+V ENNP GASI V A DPD+ N QVSY +
Sbjct: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
Query: 494 DTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVL 553
L+ LSSYVSI++++G+++A R+FD+EQLR +L + A D G P LS+NVSL + V
Sbjct: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILA 673
PGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL + AD + ++L
Sbjct: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
Query: 674 DLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLA 733
D+ P ++L YLVVA+A +S +FL +I+ +ALRL+R GL
Sbjct: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLC 730
Query: 734 SMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHL-IFPQPNYADTLINQESYEKSEPLL 792
S +Y+ V+ T + + L Q + ++ +S PL
Sbjct: 731 VKSESVVPPNYSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLC 790
Query: 793 ITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+ +L QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 791 NSSELTSH-------QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 843
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 844 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 903
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 904 GKAPAGGNGNKKKSGKKEKK 923
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 913 bits (2360), Expect = 0.0
Identities = 498/932 (53%), Positives = 631/932 (67%), Gaps = 29/932 (3%)
Query: 13 QVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRM 72
QVL LL GA + QIRY+IPEEL GS VG + KDLGL +EL +R+ +
Sbjct: 13 QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE--- 69
Query: 73 QLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPR 132
F+++ +G L+ GRIDRE++C + C + F + E+ +N++ V V I DINDN PR
Sbjct: 70 DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPR 129
Query: 133 FLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYP 192
F+ + ++++I E+A P +F L D DV NSL+ + ++ N +FS+ + G KYP
Sbjct: 130 FVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYP 189
Query: 193 ELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVP 252
L+LE LDRE ++ +RL+LTAMDGGDP S I + V D NDN P+F+Q VYRVS+
Sbjct: 190 VLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQ 249
Query: 253 ENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDS 312
EN+P GT VL V ATDQDEG++ E+TY+F+ S +F LN TG+I+T+ LD+E++
Sbjct: 250 ENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEET 308
Query: 313 SFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVF 372
S Y L VEA+DG V I I+D NDN PEV S S I E + GTVIAL +V
Sbjct: 309 SRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVR 368
Query: 373 DRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPL 432
D+DSG NG+VTC +PF+LE + NYY+LV AL+RE+ YN+T+ ATDKG P L
Sbjct: 369 DKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPAL 428
Query: 433 STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLA 492
S+ T I+L+++D NDN P F +SY V+V ENNP GASI V+A DPD+ N +VSYS+
Sbjct: 429 SSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSIL 488
Query: 493 EDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFV 552
L+ L SYVS++ +G+++A R+FD+EQLR +L + A D G P LS+NVSL + V
Sbjct: 489 ASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 548
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
D NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 549 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 608
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L
Sbjct: 609 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 668
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR--------WHKSRL 724
DL S P ++L YLVVA+A +S +FL VI+ +ALRL+R ++ L
Sbjct: 669 PDL-SDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGL 727
Query: 725 LQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQES 784
SG G +P +H G YS+ + + + S K+ F N + +
Sbjct: 728 CSKSGPG---VPPNHSEGT-------LPYSYNLCIASHSAKTE--FNSLNLTPEMAPPQD 775
Query: 785 YEKSEPLLI----TQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
+P ++ +D QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 776 LLCDDPSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 835
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 836 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 895
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 896 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 927
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,095,700
Number of Sequences: 37866
Number of extensions: 1653812
Number of successful extensions: 10242
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3149
Number of HSP's gapped (non-prelim): 686
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.