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Search of human proteins with 11056063
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11056063 protocadherin gamma subfamily A, 7 isoform 1
precursor [Homo sapiens]
(932 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1850 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1598 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1412 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1403 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1399 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1398 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1380 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1378 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1372 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1368 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1350 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1343 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1341 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1158 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1149 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1145 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1144 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1127 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1125 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1118 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1117 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1097 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1093 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1089 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 918 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 917 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 909 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 908 0.0
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 899 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 889 0.0
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1850 bits (4793), Expect = 0.0
Identities = 932/932 (100%), Positives = 932/932 (100%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA
Sbjct: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID
Sbjct: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1598 bits (4139), Expect = 0.0
Identities = 809/811 (99%), Positives = 810/811 (99%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA
Sbjct: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID
Sbjct: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAP 811
SQESCEKNDSLLTSVDFQECKENLPSIQ +P
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSP 811
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1412 bits (3654), Expect = 0.0
Identities = 718/918 (78%), Positives = 798/918 (86%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ VKI+EN AP RFPL E DPDVG NSLQ ++LS N HFS+ VQS KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VLE LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
+PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST LDYE+++F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
YE+ V+A+DGPG +AKVLIT+LDVNDN PEV +TS S +I E P GTVIALF + DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG VTC+IP +LPF+LEKS+ NYYRLVT LDRE + LYNIT+ ATD GTPPLS
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
Query: 795 VDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
D E K +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
Sbjct: 795 QDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
Query: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
Sbjct: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
Query: 915 APAGGNGNKKKSGKKEKK 932
APAGGNGNKKKSGKKEKK
Sbjct: 915 APAGGNGNKKKSGKKEKK 932
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1403 bits (3631), Expect = 0.0
Identities = 713/924 (77%), Positives = 785/924 (84%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
D G LL + G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P+F E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS +
Sbjct: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
KYPELVLE LDREEE +HHLVLTASDGGDP RS T + VTV D ND+ PVF+LP+Y+
Sbjct: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+ F LN TGEI E LD
Sbjct: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
YEET FYE+E+QA+DG L AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D DS +NG+VTC+I LPFKLEKSID+YYRLV + LDRE +S YNIT+ ATDGG
Sbjct: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
+PPLS E H +QVAD NDNPPTF SY YI ENN RGASIF VTA D DS++NAQI
Sbjct: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ ELQ++VTA DSGDPPLSSN+SL
Sbjct: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGS E DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL V SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
Query: 789 DSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
D L D + E+ P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 793 DPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 852
Query: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 853 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 912
Query: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKRDGKAPAGGNGNKKKSGKKEKK 936
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1399 bits (3620), Expect = 0.0
Identities = 702/922 (76%), Positives = 798/922 (86%)
Query: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
RG LL LLGT E +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
Query: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
RTQLF+LN +SGSLVTA RIDREE+CAQ CLV NIL+EDK+ ++ +++EI DINDN
Sbjct: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
Query: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
P F TEE+ +KI E T PG RFP+ A DPDVG NSLQ+Y+LSPN +FSLAV S + K
Sbjct: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
Query: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
YPELVLER LDRE++ +H LVL ASDGGDP S HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
Query: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
V ENVPVGTRLLTV+A D DEG N +V+Y K+ K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
Query: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
+ FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+ +G IAL
Sbjct: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
Query: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
+ DRDSG+NG+V + NLPFKLEKSID YYRLVT +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
Query: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
Query: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
Query: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
+LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
Query: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790
GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++
Sbjct: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
Query: 791 LLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
LL + D E K + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 791 LLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 RDGKAPAGGNGNKKKSGKKEKK 932
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1398 bits (3619), Expect = 0.0
Identities = 714/930 (76%), Positives = 786/930 (84%), Gaps = 3/930 (0%)
Query: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
++PR G+ LL LLGT WE G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+
Sbjct: 6 SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
Query: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK L+ +++E
Sbjct: 63 GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
Query: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
IIDINDN P+F E++ VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
Query: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Q+GD+ PELVLER LDREEE HHLVLTASDGG PPRSST I VTV+D ND+ PVF
Sbjct: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
Query: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI K +F LN TGEIS
Sbjct: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
Query: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
+ LDYEE +FYEME+QA+D L + K+LI+V DVNDN PEV +TSL S + E++
Sbjct: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
Query: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
GTVIA + D+DSGKNG+V C +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
Query: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
Query: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
+NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
Query: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
Query: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
AVADSIPEVL +LGSL+PS P + LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
Query: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782
RLLQ S G L VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
Query: 783 ESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 842
E CEKNDSLLTSVDF E K QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ
Sbjct: 783 EGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 842
Query: 843 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 902
FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
Sbjct: 843 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 902
Query: 903 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 903 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1380 bits (3571), Expect = 0.0
Identities = 701/932 (75%), Positives = 788/932 (84%), Gaps = 1/932 (0%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA P D+ + +LLG E A +ILYSV EE ++GS VG+IAKDLGL PRELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSG+LVTAGRIDREE+C +S C+ N IL+ED + + ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIID+NDN P F TE+ +K+ EN PG RFPL EA DPDVG NSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
VQSG D KYPELVLER LDREEE VHHLVLTA DGGDP RS TA I + +VD ND+ P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y V+V ENVPVGTRLLTV A D DEG NG+VTYSFRK+ K+ ++F LNSL+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
I+ L GLDYE++ FY+++V+A DGPG ++KVL+TVLD NDNAPEVT+TSL+SS+ E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG NG VTC+IP+NLPF LEK+ NYYRL+T + LDRE +S YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
T+ ATD GTPPLS ETHI +QV D NDNPPTFPH+SYS YI ENNPRGASI +TAQD D
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA+ITYSLAEDT QGAP+SSYVSINS+TG+LYAL SFDYEQ R+LQL +TA DSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYP PTDGSTG+ELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLFAVGL+TGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIP+VLADLGSL+PS P + LTLYLVVAVA VSCVFLAFV VLLAL+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLL A LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIF QP+Y D LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
S+ESCEK++ LL + D E K + P++QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD-PNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1378 bits (3567), Expect = 0.0
Identities = 705/932 (75%), Positives = 787/932 (84%), Gaps = 1/932 (0%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MA+ PRG L +LLGT E +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS C+VNFNIL+E+KM +Y ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDN PRF EE+ VK+ EN A G R L A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V SG D KYPELVLE+ LDRE+E VH L+LTA DGGDP S T HI+VTV+D ND+ P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
+F+ +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR K+ + F L+S GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTL+ LDYEE+ FY MEV AQDG + AKV++TV DVNDNAPEV +TSL+SSI ED
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL D GTPPLS E+HI ++VAD NDNPP FP +SYS + ENNPRG SIF VTA D D
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGS++ P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQA LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
S+ESCEK++ LL S D + + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1372 bits (3552), Expect = 0.0
Identities = 696/924 (75%), Positives = 779/924 (84%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
DY+G LL ILLGT WE +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII
Sbjct: 9 DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLFALN RSGSLVTAGRIDREE+C + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69 RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P F E+ +KI EN A +RFPL A DPD+G NSLQSY+LSPN HFSL VQ+G D
Sbjct: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
+KYPELVL+R LDREE+ HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
+VPEN+ +GT+LL V+A D DEGVN EV YSFR + K ++F L+ +G IST+ LD
Sbjct: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
+EE+ FY+MEVQA D G +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D+DS +NG+V C I NLPFKLEKS NYY LVT LDRE + YNIT+ ATD G
Sbjct: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+ VTA D D E+NAQIT
Sbjct: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGSLE DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
Query: 789 DSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
+ LL S D K++ I+QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 789 EPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
Query: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
Query: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1368 bits (3542), Expect = 0.0
Identities = 691/932 (74%), Positives = 776/932 (83%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA + R LL LL T WEA AG+I YSV EE D+GSFVG+IAKDLGLEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
E+GVRI+SRGR+QLFALN RSGSLVTA RIDREE+CAQSA CL+NFNIL+EDK+ +Y ++
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEI DINDN PRF EE+ +KI E T PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V+ G D KYPELVLER LDREEE VHHLVL ASDGGDP S T+ I V V+D ND+ P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y++++PEN VGTR+LTV A D DEG +V Y K + ++F L S +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
++ ++ LDYE+ F+E++++AQDGPG LT+AKV++TVLDVNDNAPE MTS +SS+ ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GT+I LF + DRDSG+N TC++PE+LPFKLEKS+DNYYRLVTT+ LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL A DGG P LS + HI +QVAD NDN P F +SYS YI ENNPRGAS+F VTA D D
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA +TYS AEDT+QGAP+SSY+SINSDTGVLYAL+SFDYEQLR+LQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPA PTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQAS G L + +SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQESCEK D L E + QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1350 bits (3493), Expect = 0.0
Identities = 691/918 (75%), Positives = 766/918 (83%), Gaps = 1/918 (0%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL + L EA AG I YSV EETDKGSFVG+IAKDLGL+P+ELA+ GVRI+SRGR L
Sbjct: 15 LLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
FALN RSGSL+TA RIDREE+CAQS CLV+FNIL+EDKM L+P++VEIIDINDN P+F
Sbjct: 75 FALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQ 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ K+ E T PG R L D DVG NSLQSYQLS N HFSL VQ G D ++PE+
Sbjct: 135 LEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEM 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VL+ LDREEE VHHL+LTASDGG+P RS T I + VVD ND+ P F+ QY + VPEN
Sbjct: 195 VLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
VP+GT+LL V+A D DEG NGEVTYSF + ++ ++F L+S TGEIS E LD+EE
Sbjct: 255 VPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKM 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y MEVQAQDG G + K KVLI VLDVNDNAPEVT+TS+++++PE+ P GT+IAL + D+
Sbjct: 315 YSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQ 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG TC IP NLPFKLEK +DNYYRLVT + LDRE +S YNIT+ A D GTP LS
Sbjct: 375 DSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ETHI + V D NDN P F SYS YI ENNPRGASIF V A D DS +NAQITYSL ED
Sbjct: 435 ETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
TIQGAP+S+Y+SINSDTGVLYAL+SFDYEQ R++QL+V A DSGDPPLSSN+SLSLF+LD
Sbjct: 495 TIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAP SAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVA A VSCVFLAFV+VLLA RLRRWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK L
Sbjct: 735 MPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAP 794
Query: 795 VDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
E K+ P QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
Sbjct: 795 QSLLEDKKE-PFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 853
Query: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
Sbjct: 854 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 913
Query: 915 APAGGNGNKKKSGKKEKK 932
APAGGNGNKKKSGKKEKK
Sbjct: 914 APAGGNGNKKKSGKKEKK 931
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1343 bits (3475), Expect = 0.0
Identities = 690/931 (74%), Positives = 765/931 (82%), Gaps = 1/931 (0%)
Query: 3 AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61
A P RG LL LLG WEA A +I YSV EET+KG VG+I+KDL LEPRELAE
Sbjct: 2 AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
Query: 62 RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121
R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62 RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
Query: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181
E+ DIND+ P+F E + VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL
Sbjct: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
Query: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241
VQ+GD+ PELVLER LDREE HHLVLTASDGG+P RSST I VTV+D ND+ PV
Sbjct: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
Query: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301
F+ Y+V V ENVP GT LLT A DLDEG+NG+V Y F KI K +F LN TGEI
Sbjct: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
Query: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361
ST + LDYEE +FYEME+QA+DG G KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
Query: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421
GTVI LF DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE S YNIT
Sbjct: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
Query: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481
+ ATD GTPPLS E HI +QV D NDNPP F +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
Query: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541
+N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
Query: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601
LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
Query: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
Query: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721
VA+ADSIP++LADLGSL+ DLTLYLVVAVA VSCVFL FV+ LLALRLR WH
Sbjct: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
Query: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781
S LL+A+ GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
Query: 782 QESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841
Q+SCEKN+ L SVD + E+ P + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 841
Query: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 842 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 901
Query: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1341 bits (3471), Expect = 0.0
Identities = 683/929 (73%), Positives = 773/929 (83%), Gaps = 2/929 (0%)
Query: 6 RGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVR 65
RG R LL I LGT A +I YSV EET+KGSFVG+I+KDLGLEPRELA+RGVR
Sbjct: 7 RGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66
Query: 66 IISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIID 125
I+SRG+TQLFA+N RSGSL+TAGRIDREE+C + C +N +L+ED + +Y ++VEIID
Sbjct: 67 IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126
Query: 126 INDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSG 185
INDN P F +E+ +K+ E+ PG RF L A DPDVG NSLQSYQLSPN +FSL ++
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186
Query: 186 DDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLP 245
D K PELVLE LDRE+E H L+LTA DGGDP R I+V V+DVNDH P+F+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246
Query: 246 QYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLE 305
Y+V+VPEN+ GTR+L V+A D DEG+NGEV YSFR + K ++F L+S TGE+
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306
Query: 306 GLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTV 365
LD+E+ FYEME+Q QDG G T +LITV+DVNDNAPE+T+TS +SI E++P GTV
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366
Query: 366 IALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKAT 425
IAL +QD+DSG+NG+V+C IP +LPFKLEK+ NYY+L+T++ LDRE + YNITL AT
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426
Query: 426 DGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNA 485
D G+PPLS ETH+++ VAD NDNPP FPHSSYS YI ENNPRGASIF VTA D DS+ NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486
Query: 486 QITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSN 545
+TYSL +DT+QG P+SSYVSINS+TGVLYALQSFDYEQ R+L+LRV A DSGDPPLSSN
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546
Query: 546 MSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 605
+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606
Query: 606 YLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 665
Y LLKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666
Query: 666 DSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLL 725
DSIPEVLADLGSLE DL+LYLVVAVA VSC+FL FV+VLLALRL RWHKSRLL
Sbjct: 667 DSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLL 726
Query: 726 QASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESC 785
QASEGGLA +PTSHFVG+DGVQAFLQTYSHEVSL ADS+KSHLIFPQPNY D LISQESC
Sbjct: 727 QASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESC 786
Query: 786 EKNDSLLTSVDFQEC--KENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
EK++ LL + D K + S QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 787 EKSEPLLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 846
Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 847 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 906
Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 907 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 935
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1158 bits (2995), Expect = 0.0
Identities = 596/803 (74%), Positives = 678/803 (84%), Gaps = 2/803 (0%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ VKI+EN AP RFPL E DPDVG NSLQ ++LS N HFS+ VQS KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VLE LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
+PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST LDYE+++F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
YE+ V+A+DGPG +AKVLIT+LDVNDN PEV +TS S +I E P GTVIALF + DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG VTC+IP +LPF+LEKS+ NYYRLVT LDRE + LYNIT+ ATD GTPPLS
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
Query: 795 VDFQECKENLPSIQQA--PPNTD 815
D E K +Q + PP +
Sbjct: 795 QDLLETKGEPRQLQVSFFPPKRE 817
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1149 bits (2972), Expect = 0.0
Identities = 589/799 (73%), Positives = 661/799 (82%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
D G LL + G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P+F E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS +
Sbjct: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
KYPELVLE LDREEE +HHLVLTASDGGDP RS T + VTV D ND+ PVF+LP+Y+
Sbjct: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+ F LN TGEI E LD
Sbjct: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
YEET FYE+E+QA+DG L AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D DS +NG+VTC+I LPFKLEKSID+YYRLV + LDRE +S YNIT+ ATDGG
Sbjct: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
+PPLS E H +QVAD NDNPPTF SY YI ENN RGASIF VTA D DS++NAQI
Sbjct: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ ELQ++VTA DSGDPPLSSN+SL
Sbjct: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGS E DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL V SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
Query: 789 DSLLTSVDFQECKENLPSI 807
D L D + E+ P +
Sbjct: 793 DPLSLLDDSKFPIEDTPLV 811
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1145 bits (2961), Expect = 0.0
Identities = 589/799 (73%), Positives = 661/799 (82%), Gaps = 3/799 (0%)
Query: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
++PR G+ LL LLGT WE G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+
Sbjct: 6 SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
Query: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK L+ +++E
Sbjct: 63 GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
Query: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
IIDINDN P+F E++ VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
Query: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Q+GD+ PELVLER LDREEE HHLVLTASDGG PPRSST I VTV+D ND+ PVF
Sbjct: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
Query: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI K +F LN TGEIS
Sbjct: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
Query: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
+ LDYEE +FYEME+QA+D L + K+LI+V DVNDN PEV +TSL S + E++
Sbjct: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
Query: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
GTVIA + D+DSGKNG+V C +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
Query: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
Query: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
+NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
Query: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
Query: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
AVADSIPEVL +LGSL+PS P + LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
Query: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782
RLLQ S G L VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
Query: 783 ESCEKNDSLLTSVDFQECK 801
E CEKNDSLLTSVDF E K
Sbjct: 783 EGCEKNDSLLTSVDFHEYK 801
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1144 bits (2960), Expect = 0.0
Identities = 577/791 (72%), Positives = 671/791 (84%)
Query: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
RG LL LLGT E +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
Query: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
RTQLF+LN +SGSLVTA RIDREE+CAQ CLV NIL+EDK+ ++ +++EI DINDN
Sbjct: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
Query: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
P F TEE+ +KI E T PG RFP+ A DPDVG NSLQ+Y+LSPN +FSLAV S + K
Sbjct: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
Query: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
YPELVLER LDRE++ +H LVL ASDGGDP S HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
Query: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
V ENVPVGTRLLTV+A D DEG N +V+Y K+ K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
Query: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
+ FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+ +G IAL
Sbjct: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
Query: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
+ DRDSG+NG+V + NLPFKLEKSID YYRLVT +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
Query: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
Query: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
Query: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
+LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
Query: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790
GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++
Sbjct: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
Query: 791 LLTSVDFQECK 801
LL + D E K
Sbjct: 791 LLITQDLLEMK 801
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1127 bits (2914), Expect = 0.0
Identities = 581/802 (72%), Positives = 660/802 (82%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MA+ PRG L +LLGT E +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS C+VNFNIL+E+KM +Y ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDN PRF EE+ VK+ EN A G R L A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V SG D KYPELVLE+ LDRE+E VH L+LTA DGGDP S T HI+VTV+D ND+ P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
+F+ +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR K+ + F L+S GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTL+ LDYEE+ FY MEV AQDG + AKV++TV DVNDNAPEV +TSL+SSI ED
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL D GTPPLS E+HI ++VAD NDNPP FP +SYS + ENNPRG SIF VTA D D
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGS++ P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQA LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQESCEKNDSLLTSVDFQECKE 802
S+ESCEK++ LL S KE
Sbjct: 781 SEESCEKSEPLLMSDKVDANKE 802
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1125 bits (2911), Expect = 0.0
Identities = 577/808 (71%), Positives = 664/808 (82%), Gaps = 1/808 (0%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA P D+ + +LLG E A +ILYSV EE ++GS VG+IAKDLGL PRELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSG+LVTAGRIDREE+C +S C+ N IL+ED + + ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIID+NDN P F TE+ +K+ EN PG RFPL EA DPDVG NSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
VQSG D KYPELVLER LDREEE VHHLVLTA DGGDP RS TA I + +VD ND+ P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y V+V ENVPVGTRLLTV A D DEG NG+VTYSFRK+ K+ ++F LNSL+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
I+ L GLDYE++ FY+++V+A DGPG ++KVL+TVLD NDNAPEVT+TSL+SS+ E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG NG VTC+IP+NLPF LEK+ NYYRL+T + LDRE +S YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
T+ ATD GTPPLS ETHI +QV D NDNPPTFPH+SYS YI ENNPRGASI +TAQD D
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA+ITYSLAEDT QGAP+SSYVSINS+TG+LYAL SFDYEQ R+LQL +TA DSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYP PTDGSTG+ELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLFAVGL+TGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIP+VLADLGSL+PS P + LTLYLVVAVA VSCVFLAFV VLLAL+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLL A LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIF QP+Y D LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQ 808
S+ESCEK++ LL + D E K + P++Q
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD-PNLQ 807
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1118 bits (2893), Expect = 0.0
Identities = 570/788 (72%), Positives = 650/788 (82%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
DY+G LL ILLGT WE +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII
Sbjct: 9 DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLFALN RSGSLVTAGRIDREE+C + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69 RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P F E+ +KI EN A +RFPL A DPD+G NSLQSY+LSPN HFSL VQ+G D
Sbjct: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
+KYPELVL+R LDREE+ HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
+VPEN+ +GT+LL V+A D DEGVN EV YSFR + K ++F L+ +G IST+ LD
Sbjct: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
+EE+ FY+MEVQA D G +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D+DS +NG+V C I NLPFKLEKS NYY LVT LDRE + YNIT+ ATD G
Sbjct: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+ VTA D D E+NAQIT
Sbjct: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGSLE DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
Query: 789 DSLLTSVD 796
+ LL S D
Sbjct: 789 EPLLLSGD 796
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1117 bits (2890), Expect = 0.0
Identities = 565/791 (71%), Positives = 649/791 (82%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA + R LL LL T WEA AG+I YSV EE D+GSFVG+IAKDLGLEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
E+GVRI+SRGR+QLFALN RSGSLVTA RIDREE+CAQSA CL+NFNIL+EDK+ +Y ++
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEI DINDN PRF EE+ +KI E T PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V+ G D KYPELVLER LDREEE VHHLVL ASDGGDP S T+ I V V+D ND+ P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y++++PEN VGTR+LTV A D DEG +V Y K + ++F L S +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
++ ++ LDYE+ F+E++++AQDGPG LT+AKV++TVLDVNDNAPE MTS +SS+ ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GT+I LF + DRDSG+N TC++PE+LPFKLEKS+DNYYRLVTT+ LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL A DGG P LS + HI +QVAD NDN P F +SYS YI ENNPRGAS+F VTA D D
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA +TYS AEDT+QGAP+SSY+SINSDTGVLYAL+SFDYEQLR+LQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPA PTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQAS G L + +SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKNDSL 791
SQESCEK D L
Sbjct: 781 SQESCEKKDFL 791
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1097 bits (2837), Expect = 0.0
Identities = 565/788 (71%), Positives = 640/788 (81%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL + L EA AG I YSV EETDKGSFVG+IAKDLGL+P+ELA+ GVRI+SRGR L
Sbjct: 15 LLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
FALN RSGSL+TA RIDREE+CAQS CLV+FNIL+EDKM L+P++VEIIDINDN P+F
Sbjct: 75 FALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQ 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ K+ E T PG R L D DVG NSLQSYQLS N HFSL VQ G D ++PE+
Sbjct: 135 LEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEM 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VL+ LDREEE VHHL+LTASDGG+P RS T I + VVD ND+ P F+ QY + VPEN
Sbjct: 195 VLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
VP+GT+LL V+A D DEG NGEVTYSF + ++ ++F L+S TGEIS E LD+EE
Sbjct: 255 VPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKM 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y MEVQAQDG G + K KVLI VLDVNDNAPEVT+TS+++++PE+ P GT+IAL + D+
Sbjct: 315 YSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQ 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG TC IP NLPFKLEK +DNYYRLVT + LDRE +S YNIT+ A D GTP LS
Sbjct: 375 DSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ETHI + V D NDN P F SYS YI ENNPRGASIF V A D DS +NAQITYSL ED
Sbjct: 435 ETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
TIQGAP+S+Y+SINSDTGVLYAL+SFDYEQ R++QL+V A DSGDPPLSSN+SLSLF+LD
Sbjct: 495 TIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAP SAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVA A VSCVFLAFV+VLLA RLRRWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK L
Sbjct: 735 MPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAP 794
Query: 795 VDFQECKE 802
E K+
Sbjct: 795 QSLLEDKK 802
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1093 bits (2827), Expect = 0.0
Identities = 556/791 (70%), Positives = 645/791 (81%)
Query: 6 RGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVR 65
RG R LL I LGT A +I YSV EET+KGSFVG+I+KDLGLEPRELA+RGVR
Sbjct: 7 RGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66
Query: 66 IISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIID 125
I+SRG+TQLFA+N RSGSL+TAGRIDREE+C + C +N +L+ED + +Y ++VEIID
Sbjct: 67 IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126
Query: 126 INDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSG 185
INDN P F +E+ +K+ E+ PG RF L A DPDVG NSLQSYQLSPN +FSL ++
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186
Query: 186 DDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLP 245
D K PELVLE LDRE+E H L+LTA DGGDP R I+V V+DVNDH P+F+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246
Query: 246 QYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLE 305
Y+V+VPEN+ GTR+L V+A D DEG+NGEV YSFR + K ++F L+S TGE+
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306
Query: 306 GLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTV 365
LD+E+ FYEME+Q QDG G T +LITV+DVNDNAPE+T+TS +SI E++P GTV
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366
Query: 366 IALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKAT 425
IAL +QD+DSG+NG+V+C IP +LPFKLEK+ NYY+L+T++ LDRE + YNITL AT
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426
Query: 426 DGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNA 485
D G+PPLS ETH+++ VAD NDNPP FPHSSYS YI ENNPRGASIF VTA D DS+ NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486
Query: 486 QITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSN 545
+TYSL +DT+QG P+SSYVSINS+TGVLYALQSFDYEQ R+L+LRV A DSGDPPLSSN
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546
Query: 546 MSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 605
+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606
Query: 606 YLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 665
Y LLKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666
Query: 666 DSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLL 725
DSIPEVLADLGSLE DL+LYLVVAVA VSC+FL FV+VLLALRL RWHKSRLL
Sbjct: 667 DSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLL 726
Query: 726 QASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESC 785
QASEGGLA +PTSHFVG+DGVQAFLQTYSHEVSL ADS+KSHLIFPQPNY D LISQESC
Sbjct: 727 QASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESC 786
Query: 786 EKNDSLLTSVD 796
EK++ LL + D
Sbjct: 787 EKSEPLLIAED 797
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1089 bits (2816), Expect = 0.0
Identities = 566/806 (70%), Positives = 641/806 (79%), Gaps = 1/806 (0%)
Query: 3 AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61
A P RG LL LLG WEA A +I YSV EET+KG VG+I+KDL LEPRELAE
Sbjct: 2 AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
Query: 62 RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121
R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62 RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
Query: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181
E+ DIND+ P+F E + VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL
Sbjct: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
Query: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241
VQ+GD+ PELVLER LDREE HHLVLTASDGG+P RSST I VTV+D ND+ PV
Sbjct: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
Query: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301
F+ Y+V V ENVP GT LLT A DLDEG+NG+V Y F KI K +F LN TGEI
Sbjct: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
Query: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361
ST + LDYEE +FYEME+QA+DG G KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
Query: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421
GTVI LF DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE S YNIT
Sbjct: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
Query: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481
+ ATD GTPPLS E HI +QV D NDNPP F +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
Query: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541
+N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
Query: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601
LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
Query: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
Query: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721
VA+ADSIP++LADLGSL+ DLTLYLVVAVA VSCVFL FV+ LLALRLR WH
Sbjct: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
Query: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781
S LL+A+ GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
Query: 782 QESCEKNDSLLTSVDFQECKENLPSI 807
Q+SCEKN+ L SVD + E+ P +
Sbjct: 782 QQSCEKNEPLCVSVDSKFPIEDTPLV 807
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 918 bits (2372), Expect = 0.0
Identities = 498/927 (53%), Positives = 637/927 (68%), Gaps = 23/927 (2%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ G A +I YS+ EE K S VG++AKDLGL R+L R +R+ + +
Sbjct: 20 FLLSLFPG----ALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KE 73
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F +N SG L+ + RIDRE+IC + C+++F+ + E+ +N++ I V + DINDN P F
Sbjct: 74 YFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLF 133
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
+IN+KI E+T PG FPL A D DVG NSLQ Y L+ N +F LA + D KYPE
Sbjct: 134 KQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPE 193
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L+L+ LDREE +H LVLTA DGGDPP+S T I++ V D ND+ PVFS Y+VT+ E
Sbjct: 194 LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRE 253
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
+VP G +L V A D DEG+N E+TYSF + ++ F+LN TGEI+T + LD+E +
Sbjct: 254 DVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIAS 313
Query: 314 FYEMEVQAQDGPGSLTK-AKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Y + ++A+D PG L + + +LD ND APEV +TS+S+ +PED+P GTVIAL +
Sbjct: 314 SYTLSIEAKD-PGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTR 372
Query: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
DRDSG+NGEV C + N F L+ S NYY+LVT LDRE + YN+T+ ATDGG PPL
Sbjct: 373 DRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPL 432
Query: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
S + + ++D NDN P F +SY V++AENNP GASI ++A D D + Q++YS+
Sbjct: 433 SSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIV 492
Query: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
++ + SYVS+++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 493 ASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 552
Query: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612
Query: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 672
Query: 673 ADLGS-LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGG 731
DL EPSD L YLVVA+A +S +F V++ ++LRLR +S + G
Sbjct: 673 PDLSDRREPSDP--QAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPG 730
Query: 732 LANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQ--PNYV---DMLISQESCE 786
L++ P + YS+ + + + S K+ F P V D++ S E
Sbjct: 731 LSSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWE 788
Query: 787 KNDSL-LTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT 845
+N + V F + ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT
Sbjct: 789 QNTNHGAAGVPF----ASDTILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT 844
Query: 846 EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT 905
EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT
Sbjct: 845 EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT 904
Query: 906 NAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 905 NAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 917 bits (2370), Expect = 0.0
Identities = 500/934 (53%), Positives = 634/934 (67%), Gaps = 39/934 (4%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ G A + +I Y++ EE GS VG +AKDLGL REL R +R+ +
Sbjct: 18 FLLSLFCG----AISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F ++ SG L+ GRIDRE+IC + C + F + E+ MN++ + V I DINDN PRF
Sbjct: 71 YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
+ + I+++I E+ PGV+F L A D DV NSL+ Y ++PN++FSL+ + D +KYP
Sbjct: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L+LE+ LDRE + H L+LTA DGGDPP S T HI + V D ND+ PVFS Y+V++ E
Sbjct: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
NVP GT +L V A D DEG+N E+TY+F +P +F+LN TG+I+T LD+EET+
Sbjct: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETS 309
Query: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373
Y + V+A+DG V I ++D NDNAPEVT S S+ IPED+ LGTVIAL ++D
Sbjct: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
Query: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433
+DSG+NG VTC E +PFKLE + NYY+LV L+RE + YN+T+ ATD G P LS
Sbjct: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
Query: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
T I + ++D NDN P F +SY V+++ENNP GASI V+A D D N +++YS+
Sbjct: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
Query: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553
++ + SYVS++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613
D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673
PGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
Query: 674 DLGSL-EPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
DL EPSD +L YLVVA+A +S +FL V++ +ALRLRR + GL
Sbjct: 670 DLSDRPEPSDP--QTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGL 727
Query: 733 AN-----VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEK 787
+ VP +H G YS+ + + + S K+ + + ++ E
Sbjct: 728 CSKSGPGVPPNHSEG-------TLPYSYNLCIASHSAKT-------EFNSLNLTPEMAPP 773
Query: 788 NDSLLTSVDFQECKENL-------PSI--QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 838
D L C N PS+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTW
Sbjct: 774 QDLLCDDPSMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW 833
Query: 839 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 898
PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP
Sbjct: 834 PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP 893
Query: 899 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 894 GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 927
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 909 bits (2350), Expect = 0.0
Identities = 491/930 (52%), Positives = 631/930 (67%), Gaps = 28/930 (3%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
L +LL + + I YS+ EE KGS VG++AKDLGL +++ R +R+ +
Sbjct: 17 LFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH-- 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+++ SG L+ RIDRE+IC + RC + ++E+ +N++ + V I D+ND+ P+F
Sbjct: 75 FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFD 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
+EI+++I E+ + G R L A DPD+ NS++ Y+++ N +FSL V+ D KYPEL
Sbjct: 135 KKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
LE++LDREE+R H L+LTA DGGDPPRS+TAHI+++V D ND+ PVFS +Y++++ EN
Sbjct: 195 SLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
+P G+ +L V A D DEGVN E+ Y FR MF L+ TG I + D+E+
Sbjct: 255 LPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVER 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y MEV+A+DG G T+ KV+I +LD NDN+PE+ +TSLS I E++P G V+ALF +D
Sbjct: 315 YTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDL 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
D G NGEV C I ++PFK+ S +NYY+LVT LDRE YN+T+ ATD G PPLS
Sbjct: 375 DFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSS 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
I + VAD NDN P F +SY V++AENNP GASI V+A D D N I+YS+
Sbjct: 435 SRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVAS 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
++ VSSYVS+++ +GV++A ++FD+EQLR L + A D G P LS+N+SL + V D
Sbjct: 495 DLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
+NDN P +LYPAL DGS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD++ E+L D
Sbjct: 615 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
L P +L YLVVA+A +S +FL V++ +ALRLRR GL
Sbjct: 675 LSDRPVLSDP-QAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGLC- 732
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
V + V + + L YS+ + + K N++ + S N+ ++ S
Sbjct: 733 VKSGPVVPPNYSEGTL-PYSYNLCIAHTGTKEF------NFLKCSVPLHS---NEDMVCS 782
Query: 795 V------------DFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 842
V D E L S QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ
Sbjct: 783 VSPGALIPPHGGEDLTSHPETLTS--QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 840
Query: 843 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 902
FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
Sbjct: 841 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 900
Query: 903 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 908 bits (2347), Expect = 0.0
Identities = 480/923 (52%), Positives = 631/923 (68%), Gaps = 15/923 (1%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
L +LL + I YS+ EE KGS VG++AKDLGL +++ R +R+ +
Sbjct: 17 LFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKLH-- 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+++ +SG L+ RIDRE+IC + RC + ++E+ +N++ + V I D+ND+ P+F
Sbjct: 75 FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFR 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
+EIN++I E+ + G+ L A DPD+ NSL YQLSPN +FSL + D KYPEL
Sbjct: 135 KDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VL++ LDRE + HHLVLTA DGGDPPRS TA I++ V+D ND+ PVFS Y+V++ E+
Sbjct: 195 VLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
VP GT +L V A D DEG+N E+TYSF + K +F L+ TG I T + LD+EE
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVER 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y + ++A+D T+ KV++ V+D NDN+PE+ +TSLS I ED+P G V+ALF +D+
Sbjct: 315 YTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRDQ 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG+NGEV C++ +PFK+ S +NYY+LVT + LDRE YN+T+ ATD G PPLS
Sbjct: 375 DSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLSS 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
I + + D NDN P F S+Y V++ ENN GASI V+A D D N +++YSL
Sbjct: 435 SKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIAS 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
++ +SSYVS+++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V D
Sbjct: 495 DLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
+NDN P +LYPAL DGS + PR+A+PGYLVTKVVAVD DSG NAWLSY +++ASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF++GL TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT TL + ADS+ EVL D
Sbjct: 615 GLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
S P+ ++ YLVVA+A +S +FL V++ +ALRLR+ E L +
Sbjct: 675 F-SDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVLCS 733
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDML----ISQESCEKNDS 790
S VG Y++ + D P+ N+ + +Q++ K+
Sbjct: 734 --KSGPVGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNLNKDSM 786
Query: 791 LLTSVDFQECKENLPSI-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 849
LL S+ + + + QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 787 LLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 846
Query: 850 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 909
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 847 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 906
Query: 910 KRDGKAPAGGNGNKKKSGKKEKK 932
KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 907 KRDGKAPAGGNGNKKKSGKKEKK 929
>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 899 bits (2322), Expect = 0.0
Identities = 495/920 (53%), Positives = 626/920 (68%), Gaps = 17/920 (1%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ A +I Y + EE KGS VG++A DLG +EL R +R+ S
Sbjct: 20 FLLSLFC----PALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F ++ SG L+ + R+DREEIC + C + F + E+ +N Y ++VEI DIND+ P+F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
++I E+ PG RF L A D D+G+N+LQ+YQLSP+ HFSL + D +KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
+VL+ LDRE+++ +HL LTA D G PP SSTA I V V D ND+ PVFS Y+V++ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
NV GT +L V A D DEGVN E+T+SF + + F LNS TGEI+ L LD+EE
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSFSEASQIT--QFDLNSNTGEITVLNTLDFEEVK 311
Query: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373
Y + ++A+DG G + + V + V+D NDNAPEV SL + I ED LGT IAL ++D
Sbjct: 312 EYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRD 371
Query: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433
+DS NGEVTC + ++PFK+ S N Y+LVT LDRE YNIT+ ATD G PPLS
Sbjct: 372 KDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLS 431
Query: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
+ I + + D NDN P F SSY V++AENNP GASI V A D D N Q++Y +
Sbjct: 432 SSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMA 491
Query: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553
++ +SSYVSI++++GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 492 SDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVD 551
Query: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613
D+NDN P +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 552 DRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 611
Query: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673
PGLF++GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 612 PGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 671
Query: 674 DLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLA 733
D+ P +L YLVVA+A +S +FL +++ +ALRLRR + GL
Sbjct: 672 DITD-RPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLC 730
Query: 734 NVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLT 793
V + V + + L YS+ + + A + K+ F + + + L S + DS +
Sbjct: 731 -VKSESVVPPNYSEGTL-PYSYNLCV-AHTGKTEFNFLKCS--EQLSSGQDILCGDS--S 783
Query: 794 SVDFQECKEN-LPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
F C + L S QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 784 GALFPLCNSSELTSHQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 843
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 844 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 903
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 904 GKAPAGGNGNKKKSGKKEKK 923
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 889 bits (2297), Expect = 0.0
Identities = 488/922 (52%), Positives = 618/922 (67%), Gaps = 21/922 (2%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ A +I Y + EE KGS VG++A DLG +EL R +R+ S
Sbjct: 20 FLLSLFC----PALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F ++ SG L+ + R+DREEIC + C + F + E+ +N Y ++VEI DIND+ P+F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
++I E+ PG RF L A D D+G NSLQ Y+LS N FSL ++ D +KYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L LE+ LDRE++ H LVLTA DGG PP S T +++ V D ND+ PVF+ Y+V++ E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
NVP GT +L V A D DEG+N E+TYSF + ++F LNS +GEI+T + LD+EET
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFYRTG----QIFSLNSKSGEITTQKKLDFEETK 309
Query: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373
Y M V+ +DG G + + V I + D NDN+PEVT SL I E+ GT+IAL + D
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369
Query: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433
+DSG+NGEV C + +PFK+ S N Y+LVT LDRE YN+T+ ATD G PPLS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429
Query: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
+ + + D NDN P F +SY V + ENNP GASI V A D D N Q++YS+
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489
Query: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553
++ ++SYVS+++ +GV++A ++FDYEQLR +L + A D G P LS+N+SL + V
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613
D+NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673
PGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669
Query: 674 DLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLA 733
D+ P +L YLVVA+A +S +FL V++ +ALRLRR + GL
Sbjct: 670 DITD-RPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728
Query: 734 NVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLT 793
V + V + Q L YS+ + + A + K+ F + + + L S + DS +
Sbjct: 729 -VKSGPVVPPNYSQGTL-PYSYNLCV-AHTGKTEFNFLKCS--EQLSSGQDILCGDS--S 781
Query: 794 SVDFQECKENLPSIQ---QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
F C + + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 782 GALFPLCNSSESTSHPELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 841
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 842 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 901
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 RDGKAPAGGNGNKKKSGKKEKK 923
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,611,192
Number of Sequences: 37866
Number of extensions: 1700066
Number of successful extensions: 10214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3204
Number of HSP's gapped (non-prelim): 635
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.