Guide to the Human Genome
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Name: SLC5A8 Sequence: fasta or formatted (610aa) NCBI GI: 167466278
Description:

solute carrier family 5 (iodide transporter), member 8

Referenced in:

Solute Carrier Families
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         46           2
 C cysteine            1.8         11           1
 D aspartate           3.4         21           1
 E glutamate           2.0         12           1
 F phenylalanine       6.2         38           2
 G glycine             9.2         56           3
 H histidine           1.0          6           1
 I isoleucine          6.7         41           3
 K lysine              2.8         17           4
 L leucine            11.5         70           2
 M methionine          2.8         17           1
 N asparagine          3.6         22           1
 P proline             3.9         24           2
 Q glutamine           3.6         22           2
 R arginine            3.0         18           2
 S serine              7.7         47           3
 T threonine           7.4         45           3
 V valine              9.2         56           3
 W tryptophan          1.8         11           1
 Y tyrosine            4.9         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (iodide transporter), membe... 
SLC5A12               0.520   solute carrier family 5 (sodium/glucose cotransport...
SLC5A5                0.460   solute carrier family 5 (sodium iodide symporter), me...
SLC5A6                0.398   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A10               0.069   solute carrier family 5 (sodium/glucose cotransport...
SLC5A1                0.066   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A10               0.066   solute carrier family 5 (sodium/glucose cotransport...
SLC5A4                0.063   solute carrier family 5 (low affinity glucose cotran...
SLC5A11               0.062   solute carrier family 5 (sodium/glucose cotransporte...
SLC5A2                0.058   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A3                0.058   solute carrier family 5 (inositol transporters), me...
SLC5A9                0.055   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.044   solute carrier family 5 (sodium/glucose cotransport...
SLC5A7                0.035   solute carrier family 5 (choline transporter), membe...
LOC100289978          0.008   PREDICTED: hypothetical protein XP_002348035 
SLC41A2               0.008   solute carrier family 41, member 2 
SLC41A1               0.006   solute carrier family 41 member 1 
UNC93B1               0.006   unc-93 homolog B1 
SLC17A4               0.005   solute carrier family 17 (sodium phosphate), member 4...
SLC34A3               0.005   solute carrier family 34 (sodium phosphate), member ...
ZDHHC13               0.004   zinc finger, DHHC domain containing 13 isoform 2 [Ho...
ZDHHC13               0.004   zinc finger, DHHC domain containing 13 isoform 1 [Ho...
LOC100134730          0.004   PREDICTED: hypothetical protein 
OR9A4                 0.004   olfactory receptor, family 9, subfamily A, member 4 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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