Guide to the Human Genome
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Name: SLC5A1 Sequence: fasta or formatted (664aa) NCBI GI: 4507031
Description:

solute carrier family 5 (sodium/glucose cotransporter), member 1

Referenced in:

Kidney
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         50           2
 C cysteine            2.3         15           1
 D aspartate           2.6         17           1
 E glutamate           4.8         32           4
 F phenylalanine       5.6         37           2
 G glycine             8.1         54           2
 H histidine           1.4          9           1
 I isoleucine         10.1         67           2
 K lysine              4.2         28           3
 L leucine            11.0         73           3
 M methionine          4.1         27           1
 N asparagine          2.6         17           1
 P proline             4.1         27           2
 Q glutamine           2.0         13           1
 R arginine            3.5         23           2
 S serine              6.5         43           2
 T threonine           6.6         44           2
 V valine              7.4         49           3
 W tryptophan          2.1         14           2
 Y tyrosine            3.8         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (sodium/glucose cotransporter... 
SLC5A4                0.726   solute carrier family 5 (low affinity glucose cotran...
SLC5A2                0.621   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A9                0.562   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.551   solute carrier family 5 (sodium/glucose cotransport...
SLC5A11               0.510   solute carrier family 5 (sodium/glucose cotransporte...
SLC5A10               0.491   solute carrier family 5 (sodium/glucose cotransport...
SLC5A10               0.485   solute carrier family 5 (sodium/glucose cotransport...
SLC5A3                0.460   solute carrier family 5 (inositol transporters), me...
SLC5A12               0.074   solute carrier family 5 (sodium/glucose cotransport...
SLC5A6                0.072   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A5                0.064   solute carrier family 5 (sodium iodide symporter), me...
SLC5A8                0.061   solute carrier family 5 (iodide transporter), membe...
SLC5A7                0.051   solute carrier family 5 (choline transporter), membe...
TSPAN8                0.005   transmembrane 4 superfamily member 3 
OR10H2                0.005   olfactory receptor, family 10, subfamily H, member 2 ...
BDKRB2                0.005   bradykinin receptor B2 
ZFC3H1                0.005   proline/serine-rich coiled-coil 2 
OR10H5                0.005   olfactory receptor, family 10, subfamily H, member 5...
SLC6A13               0.005   solute carrier family 6 (neurotransmitter transporte...
WDR87                 0.004   NYD-SP11 protein 
SLC6A11               0.004   solute carrier family 6 (neurotransmitter transporter...
RXFP2                 0.004   relaxin/insulin-like family peptide receptor 2 [Homo...
LOC400352             0.004   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.004   PREDICTED: similar to Putative golgin subfamily A m...
OR6C74                0.004   olfactory receptor, family 6, subfamily C, member 74...
KIF16B                0.004   kinesin-like motor protein C20orf23 
C12orf51              0.004   chromosome 12 open reading frame 51 
OR10H1                0.004   olfactory receptor, family 10, subfamily H, member 1 ...
OR4C45                0.004   olfactory receptor, family 4, subfamily C, member 45...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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