Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 164663808
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo
sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens] 443 e-125
gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens] 443 e-125
gi|93004088 GPI-anchored metastasis-associated protein homolog [... 77 1e-14
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p... 41 6e-04
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ... 35 0.035
gi|4501897 activin A receptor, type IIA precursor [Homo sapiens] 35 0.059
gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens] 35 0.059
gi|53829379 plasminogen activator, urokinase receptor isoform 2 ... 34 0.077
gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens] 34 0.10
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 32 0.29
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 32 0.29
gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens] 32 0.29
gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens] 32 0.29
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens] 32 0.29
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens] 32 0.29
gi|194018544 testis expressed 101 isoform 1 [Homo sapiens] 31 0.85
gi|194097358 testis expressed 101 isoform 2 [Homo sapiens] 31 0.85
gi|7706111 8D6 antigen [Homo sapiens] 30 1.1
gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens] 30 1.1
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 30 1.5
gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens] 30 1.9
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 30 1.9
gi|4504151 granulin precursor [Homo sapiens] 29 3.2
gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3... 29 3.2
gi|239756798 PREDICTED: similar to keratin associated protein 4-... 29 3.2
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 29 3.2
gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens] 28 4.2
gi|116734714 activin A receptor type II-like 1 [Homo sapiens] 28 5.5
gi|116734712 activin A receptor type II-like 1 [Homo sapiens] 28 5.5
gi|116734708 activin A receptor, type IIB precursor [Homo sapiens] 28 5.5
>gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]
Length = 251
Score = 443 bits (1139), Expect = e-125
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGC 60
MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGC
Sbjct: 44 MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGC 103
Query: 61 TTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTAC 120
TTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTAC
Sbjct: 104 TTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTAC 163
Query: 121 FQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFT 180
FQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFT
Sbjct: 164 FQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFT 223
Query: 181 SASATTPPRALQVLALLLPVLLLVGLSA 208
SASATTPPRALQVLALLLPVLLLVGLSA
Sbjct: 224 SASATTPPRALQVLALLLPVLLLVGLSA 251
>gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]
Length = 208
Score = 443 bits (1139), Expect = e-125
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGC 60
MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGC
Sbjct: 1 MKLPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGC 60
Query: 61 TTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTAC 120
TTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTAC
Sbjct: 61 TTDKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTAC 120
Query: 121 FQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFT 180
FQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFT
Sbjct: 121 FQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFT 180
Query: 181 SASATTPPRALQVLALLLPVLLLVGLSA 208
SASATTPPRALQVLALLLPVLLLVGLSA
Sbjct: 181 SASATTPPRALQVLALLLPVLLLVGLSA 208
>gi|93004088 GPI-anchored metastasis-associated protein homolog
[Homo sapiens]
Length = 346
Score = 77.0 bits (188), Expect = 1e-14
Identities = 56/181 (30%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 2 KLPSISCP---HECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPP-DYSVV 57
K+ ++ C C EA+ +++T +L +GC +G P G+ D + +
Sbjct: 48 KMKTVKCAPGVDVCTEAVGAVET-IHGQFSLAVRGCGSGLP-GKNDRGLDLHGLLAFIQL 105
Query: 58 RGCTTDKCNAHL-MTHDAL-PNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQ 115
+ C D+CNA L +T AL P +++ PP +G ECY+C+G+ ++ C V C+
Sbjct: 106 QQCAQDRCNAKLNLTSRALDPAGNESAYPP--NGVECYSCVGLSREACQGTSPPVVSCYN 163
Query: 116 DQ----TACFQGNGRMTVGNFSVPVYIRTCHRPS-CTTEGTTSPWTAIDLQGSCCEGYLC 170
CF GN +T N +V + +R C + CT +G T P L GSCC+G C
Sbjct: 164 ASDHVYKGCFDGNVTLTAANVTVSLPVRGCVQDEFCTRDGVTGP--GFTLSGSCCQGSRC 221
Query: 171 N 171
N
Sbjct: 222 N 222
Score = 30.4 bits (67), Expect = 1.1
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 91 ECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTV--GNFSVPV 136
ECY+C+ D C+ + + V+C C + G + G FS+ V
Sbjct: 32 ECYSCVQKADDGCSPNKMKTVKCAPGVDVCTEAVGAVETIHGQFSLAV 79
>gi|4505865 plasminogen activator, urokinase receptor isoform 1
precursor [Homo sapiens]
Length = 335
Score = 41.2 bits (95), Expect = 6e-04
Identities = 44/176 (25%), Positives = 63/176 (35%), Gaps = 15/176 (8%)
Query: 32 KGCWTGPPAGQTQSNADALPPDYSVVRGCTTDKCNAHLMTHDALPNLSQAPDPPTLSGAE 91
+GC P G SN + ++ C T KCN + L NL Q +G +
Sbjct: 167 RGCGYLP--GCPGSNGFHNNDTFHFLKCCNTTKCNEGPILE--LENLPQ-------NGRQ 215
Query: 92 CYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPS-CTTEG 150
CY+C G C+ + + C C G N S +R C S C
Sbjct: 216 CYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQS--YMVRGCATASMCQHAH 273
Query: 151 TTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTP-PRALQVLALLLPVLLLVG 205
++ + SCC CN + + S +A P P L + LL L G
Sbjct: 274 LGDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWG 329
>gi|53829381 plasminogen activator, urokinase receptor isoform 3
precursor [Homo sapiens]
Length = 290
Score = 35.4 bits (80), Expect = 0.035
Identities = 29/120 (24%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 88 SGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPS-C 146
+G +CY+C G C+ + + C C G N S +R C S C
Sbjct: 167 NGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQS--YMVRGCATASMC 224
Query: 147 TTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTP-PRALQVLALLLPVLLLVG 205
++ + SCC CN + + S +A P P L + LL L G
Sbjct: 225 QHAHLGDAFSMNHIDVSCCTKSGCNHPDLDVQYRSGAAPQPGPAHLSLTITLLMTARLWG 284
>gi|4501897 activin A receptor, type IIA precursor [Homo sapiens]
Length = 513
Score = 34.7 bits (78), Expect = 0.059
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 164 CCEGYLCNRK-------SMTQPFTSASATTPPRALQVLALLLPVLLLVGL 206
CCEG +CN K +TQP ++ PP +L L+P++L+ G+
Sbjct: 104 CCEGNMCNEKFSYFPEMEVTQPTSNPVTPKPPYYNILLYSLVPLMLIAGI 153
>gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens]
Length = 246
Score = 34.7 bits (78), Expect = 0.059
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 5/135 (3%)
Query: 12 CFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVV---RGCTTDKCNAH 68
C E ++ ++TG V KGC + + Q + PP S+ R C + CN
Sbjct: 61 CEETLVFIETGTARGVVGF-KGC-SSSSSYPAQISYLVSPPGVSIASYSRVCRSYLCNNL 118
Query: 69 LMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMT 128
+ + P T + C C+G H DC C + C+ +
Sbjct: 119 TNLEPFVKLKASTPKSITSASCSCPTCVGEHMKDCLPNFVTTNSCPLAASTCYSSTLKFQ 178
Query: 129 VGNFSVPVYIRTCHR 143
G + + C R
Sbjct: 179 AGFLNTTFLLMGCAR 193
Score = 29.6 bits (65), Expect = 1.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 154 PWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTP 187
P +I C YLCN + +PF A+TP
Sbjct: 99 PGVSIASYSRVCRSYLCNNLTNLEPFVKLKASTP 132
>gi|53829379 plasminogen activator, urokinase receptor isoform 2
precursor [Homo sapiens]
Length = 281
Score = 34.3 bits (77), Expect = 0.077
Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 15/121 (12%)
Query: 32 KGCWTGPPAGQTQSNADALPPDYSVVRGCTTDKCNAHLMTHDALPNLSQAPDPPTLSGAE 91
+GC P G SN + ++ C T KCN + L NL Q +G +
Sbjct: 167 RGCGYLP--GCPGSNGFHNNDTFHFLKCCNTTKCNEGPILE--LENLPQ-------NGRQ 215
Query: 92 CYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNG---RMTVGNFSVPVYIRTCHRPSCTT 148
CY+C G C+ + + C C G R G++ +P T RP C
Sbjct: 216 CYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHERSLWGSW-LPCKSTTALRPPCCE 274
Query: 149 E 149
E
Sbjct: 275 E 275
>gi|19424138 sperm acrosomal membrane protein 14 [Homo sapiens]
Length = 124
Score = 33.9 bits (76), Expect = 0.10
Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 13/127 (10%)
Query: 78 LSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVY 137
L A P T +C C C + C D+ CF G+G V + PV
Sbjct: 9 LVMALPPGTTGVKDCVFCELTDSMQCP---GTYMHCGDDED-CFTGHG---VAPGTGPVI 61
Query: 138 IRTCHRP-SCTTEGTTS-PWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLA 195
+ C R SC E S L +CC G LCNR P + T AL +
Sbjct: 62 NKGCLRATSCGLEEPVSYRGVTYSLTTNCCTGRLCNR----APSSQTVGATTSLALGLGM 117
Query: 196 LLLPVLL 202
LL P LL
Sbjct: 118 LLPPRLL 124
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 32.3 bits (72), Expect = 0.29
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 3 LPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTT 62
+PS+ H C + ++S D+ RAP PAGQ N L D + R T
Sbjct: 787 IPSLGHCH-CKDGVMSCDS--RAPAAAC--------PAGQVFVNCSDLHTDLELSRERT- 834
Query: 63 DKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQ 122
C L+ NLS + P LSG C + H D C + C F
Sbjct: 835 --CEQQLL------NLSVSARGPCLSGCACPQGLLRHGDACFL--PEECPCTWKGKEYFP 884
Query: 123 GNGRMTVGNFSVPVYIRTCHRPS--CTTEGTTSPWTA 157
G+ M+ P + C R S CT S TA
Sbjct: 885 GDQVMS------PCHTCVCQRGSFQCTLHPCASTCTA 915
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 32.3 bits (72), Expect = 0.29
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 3 LPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTT 62
+PS+ H C + ++S D+ RAP PAGQ N L D + R T
Sbjct: 859 IPSLGHCH-CKDGVMSCDS--RAPAAAC--------PAGQVFVNCSDLHTDLELSRERT- 906
Query: 63 DKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQ 122
C L+ NLS + P LSG C + H D C + C F
Sbjct: 907 --CEQQLL------NLSVSARGPCLSGCACPQGLLRHGDACFL--PEECPCTWKGKEYFP 956
Query: 123 GNGRMTVGNFSVPVYIRTCHRPS--CTTEGTTSPWTA 157
G+ M+ P + C R S CT S TA
Sbjct: 957 GDQVMS------PCHTCVCQRGSFQCTLHPCASTCTA 987
>gi|239749989 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 32.3 bits (72), Expect = 0.29
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 3 LPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTT 62
+PS+ H C + ++S D+ RAP PAGQ N L D + R T
Sbjct: 787 IPSLGHCH-CKDGVMSCDS--RAPAAAC--------PAGQVFVNCSDLHTDLELSRERT- 834
Query: 63 DKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQ 122
C L+ NLS + P LSG C + H D C + C F
Sbjct: 835 --CEQQLL------NLSVSARGPCLSGCACPQGLLRHGDACFL--PEECPCTWKGKEYFP 884
Query: 123 GNGRMTVGNFSVPVYIRTCHRPS--CTTEGTTSPWTA 157
G+ M+ P + C R S CT S TA
Sbjct: 885 GDQVMS------PCHTCVCQRGSFQCTLHPCASTCTA 915
>gi|239749987 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 32.3 bits (72), Expect = 0.29
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 3 LPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTT 62
+PS+ H C + ++S D+ RAP PAGQ N L D + R T
Sbjct: 859 IPSLGHCH-CKDGVMSCDS--RAPAAAC--------PAGQVFVNCSDLHTDLELSRERT- 906
Query: 63 DKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQ 122
C L+ NLS + P LSG C + H D C + C F
Sbjct: 907 --CEQQLL------NLSVSARGPCLSGCACPQGLLRHGDACFL--PEECPCTWKGKEYFP 956
Query: 123 GNGRMTVGNFSVPVYIRTCHRPS--CTTEGTTSPWTA 157
G+ M+ P + C R S CT S TA
Sbjct: 957 GDQVMS------PCHTCVCQRGSFQCTLHPCASTCTA 987
>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 32.3 bits (72), Expect = 0.29
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 3 LPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTT 62
+PS+ H C + ++S D+ RAP PAGQ N L D + R T
Sbjct: 787 IPSLGHCH-CKDGVMSCDS--RAPAAAC--------PAGQVFVNCSDLHTDLELSRERT- 834
Query: 63 DKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQ 122
C L+ NLS + P LSG C + H D C + C F
Sbjct: 835 --CEQQLL------NLSVSARGPCLSGCACPQGLLRHGDACFL--PEECPCTWKGKEYFP 884
Query: 123 GNGRMTVGNFSVPVYIRTCHRPS--CTTEGTTSPWTA 157
G+ M+ P + C R S CT S TA
Sbjct: 885 GDQVMS------PCHTCVCQRGSFQCTLHPCASTCTA 915
>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 32.3 bits (72), Expect = 0.29
Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 30/157 (19%)
Query: 3 LPSISCPHECFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNADALPPDYSVVRGCTT 62
+PS+ H C + ++S D+ RAP PAGQ N L D + R T
Sbjct: 859 IPSLGHCH-CKDGVMSCDS--RAPAAAC--------PAGQVFVNCSDLHTDLELSRERT- 906
Query: 63 DKCNAHLMTHDALPNLSQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQ 122
C L+ NLS + P LSG C + H D C + C F
Sbjct: 907 --CEQQLL------NLSVSARGPCLSGCACPQGLLRHGDACFL--PEECPCTWKGKEYFP 956
Query: 123 GNGRMTVGNFSVPVYIRTCHRPS--CTTEGTTSPWTA 157
G+ M+ P + C R S CT S TA
Sbjct: 957 GDQVMS------PCHTCVCQRGSFQCTLHPCASTCTA 987
>gi|194018544 testis expressed 101 isoform 1 [Homo sapiens]
Length = 267
Score = 30.8 bits (68), Expect = 0.85
Identities = 51/200 (25%), Positives = 70/200 (35%), Gaps = 26/200 (13%)
Query: 12 CFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNA--DALPPDYSVV---RGCTTDKCN 66
C E IL + G + L KGC P G+ + PP V C CN
Sbjct: 78 CQETILIIKAGTETAI-LATKGCI---PEGEEAITIVQHSSPPGLIVTSYSNYCEDSFCN 133
Query: 67 AHLMTHDALPNL---SQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQG 123
D+L S+ + C C+ + C S + C T C+QG
Sbjct: 134 ----DKDSLSQFWEFSETTASTVSTTLHCPTCVAL--GTCFSAPS--LPCPNGTTRCYQG 185
Query: 124 NGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQP-FTSA 182
+T G V ++ CT + I G C + +TQP T
Sbjct: 186 KLEITGGGIESSVEVK-----GCTAMIGCRLMSGILAVGPMFVREACPHQLLTQPRKTEN 240
Query: 183 SATTPPRALQVLALLLPVLL 202
AT P + L LLLP+LL
Sbjct: 241 GATCLPIPVWGLQLLLPLLL 260
>gi|194097358 testis expressed 101 isoform 2 [Homo sapiens]
Length = 249
Score = 30.8 bits (68), Expect = 0.85
Identities = 51/200 (25%), Positives = 70/200 (35%), Gaps = 26/200 (13%)
Query: 12 CFEAILSLDTGYRAPVTLVRKGCWTGPPAGQTQSNA--DALPPDYSVV---RGCTTDKCN 66
C E IL + G + L KGC P G+ + PP V C CN
Sbjct: 60 CQETILIIKAGTETAI-LATKGCI---PEGEEAITIVQHSSPPGLIVTSYSNYCEDSFCN 115
Query: 67 AHLMTHDALPNL---SQAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQG 123
D+L S+ + C C+ + C S + C T C+QG
Sbjct: 116 ----DKDSLSQFWEFSETTASTVSTTLHCPTCVAL--GTCFSAPS--LPCPNGTTRCYQG 167
Query: 124 NGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDLQGSCCEGYLCNRKSMTQP-FTSA 182
+T G V ++ CT + I G C + +TQP T
Sbjct: 168 KLEITGGGIESSVEVK-----GCTAMIGCRLMSGILAVGPMFVREACPHQLLTQPRKTEN 222
Query: 183 SATTPPRALQVLALLLPVLL 202
AT P + L LLLP+LL
Sbjct: 223 GATCLPIPVWGLQLLLPLLL 242
>gi|7706111 8D6 antigen [Homo sapiens]
Length = 282
Score = 30.4 bits (67), Expect = 1.1
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 80 QAPDPPTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIR 139
Q P PP G C C GV DC+ G ++++ + + AC G R T+ + +P+ R
Sbjct: 99 QCPPPP---GLPC-PCTGV--SDCSGGTDKKLR-NCSRLACLAGELRCTLSDDCIPLTWR 151
Query: 140 TCHRPSC 146
P C
Sbjct: 152 CDGHPDC 158
>gi|34996523 LY6/PLAUR domain containing 6 [Homo sapiens]
Length = 171
Score = 30.4 bits (67), Expect = 1.1
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Query: 85 PTLSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRP 144
P G +C+ C + + + C ++ C+ + GN S+ V R
Sbjct: 42 PYPGGFKCFTCEKAADNYECNRWAPDIYCPRETRYCYTQHTMEVTGN-SISVTKRCVPLE 100
Query: 145 SCTTEGTT-SPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPP 188
C + G S + SCCEG +CN + ATT P
Sbjct: 101 ECLSTGCRDSEHEGHKVCTSCCEGNICNLPLPRNETDATFATTSP 145
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 30.0 bits (66), Expect = 1.5
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 87 LSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCH--RP 144
L+ AE C HQ G S +C +D T C R+ +P+ + CH P
Sbjct: 17 LAAAEAIWC---HQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCP 73
Query: 145 SCTTEGTTSPWTAIDLQGSCCEGYLCN 171
+ G P+ +I +CC+ LCN
Sbjct: 74 DIPSLG-LGPYVSI----ACCQTSLCN 95
>gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]
Length = 2040
Score = 29.6 bits (65), Expect = 1.9
Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 24/150 (16%)
Query: 38 PPAGQTQS-----NADALPPDYSVVRGCTTDKCNAH--LMTHDA-LPNLSQAPDPPTLSG 89
P AG T++ +A+ P Y++ + CN L+T + L L+ PDP T +
Sbjct: 1094 PNAGLTRNYCRNPDAEIRPWCYTMDPSVRWEYCNLTQCLVTESSVLATLTVVPDPSTEAS 1153
Query: 90 AECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPSCTTE 149
+E + +S VQ C+ G+G+ G+FS V RTC S T
Sbjct: 1154 SE----------EAPTEQSPGVQ------DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTP 1197
Query: 150 GTTSPWTAIDLQGSCCEGYLCNRKSMTQPF 179
T G Y N + P+
Sbjct: 1198 HWHQRTTEYYPNGGLTRNYCRNPDAEISPW 1227
Score = 27.3 bits (59), Expect = 9.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 120 CFQGNGRMTVGNFSVPVYIRTCHRPSCTT 148
C+ GNG+ G FS V RTC S T
Sbjct: 1616 CYHGNGQSYRGTFSTTVTGRTCQSWSSMT 1644
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
Length = 131
Score = 29.6 bits (65), Expect = 1.9
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Query: 92 CYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCH--RPSCTTE 149
C+ C G G S +C +D T C R+ +P+ + CH P +
Sbjct: 59 CHQCTGFG------GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCPDIPSL 112
Query: 150 GTTSPWTAIDLQGSCCEGYLCN 171
G P+ +I +CC+ LCN
Sbjct: 113 G-LGPYVSI----ACCQTSLCN 129
>gi|4504151 granulin precursor [Homo sapiens]
Length = 593
Score = 28.9 bits (63), Expect = 3.2
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 109 RRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCHRPSCTTEGTTSPWTAIDL-QGSCCE 166
R C D +CFQ +G +VG P C S W + Q SCCE
Sbjct: 101 RGFHCSADGRSCFQRSGNNSVGAIQCPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCE 159
>gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3
[Homo sapiens]
Length = 204
Score = 28.9 bits (63), Expect = 3.2
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 135 PVYIRTCHRPSCTTEGTTSP--WTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQ 192
P Y TC RPSC P ++ Q +CC C S +P S+ P+ Q
Sbjct: 42 PSYSPTCCRPSCCVSSCCKPQCCQSVCCQPTCCHPSCC-ISSCCRPSCCVSSCCKPQCCQ 100
>gi|239756798 PREDICTED: similar to keratin associated protein 4-12
isoform 3 [Homo sapiens]
Length = 204
Score = 28.9 bits (63), Expect = 3.2
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 135 PVYIRTCHRPSCTTEGTTSP--WTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQ 192
P Y TC RPSC P ++ Q +CC C S +P S+ P+ Q
Sbjct: 42 PSYSPTCCRPSCCVSSCCKPQCCQSVCCQPTCCHPSCC-ISSCCRPSCCVSSCCKPQCCQ 100
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 28.9 bits (63), Expect = 3.2
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 24 RAPVTLVRKGC-WTGPPAGQTQSNADALPPDYSVVRGCTTDKCNAHLMTH 72
RA L ++GC GP AG+ AD + ++V G TT++C A L H
Sbjct: 938 RATARLPQRGCPGDGPEAGRP---ADKI--QMAMVHGVTTEECQAALQCH 982
>gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]
Length = 4646
Score = 28.5 bits (62), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 2 KLPSISCPHECFEAILSLDTGYRAPVTLVRKG 33
KL S+ PH CF L+++ + PV L+R G
Sbjct: 4112 KLHSLQ-PHACFRLFLTMEINPKVPVNLLRAG 4142
>gi|116734714 activin A receptor type II-like 1 [Homo sapiens]
Length = 503
Score = 28.1 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 164 CCEGYLCNRK-SMTQPFTSASATTPPRALQVLALLLPVLLLVGLSA 208
CC+ +LCN S+ T + P Q+ +L PVL L+ L A
Sbjct: 89 CCDSHLCNHNVSLVLEATQPPSEQPGTDGQLALILGPVLALLALVA 134
>gi|116734712 activin A receptor type II-like 1 [Homo sapiens]
Length = 503
Score = 28.1 bits (61), Expect = 5.5
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 164 CCEGYLCNRK-SMTQPFTSASATTPPRALQVLALLLPVLLLVGLSA 208
CC+ +LCN S+ T + P Q+ +L PVL L+ L A
Sbjct: 89 CCDSHLCNHNVSLVLEATQPPSEQPGTDGQLALILGPVLALLALVA 134
>gi|116734708 activin A receptor, type IIB precursor [Homo sapiens]
Length = 512
Score = 28.1 bits (61), Expect = 5.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 164 CCEGYLCNRKSMTQPFTSASATT---PPRALQVLALLLPVLLLVG 205
CCEG CN + P T PP A +L +L LL +G
Sbjct: 103 CCEGNFCNERFTHLPEAGGPEVTYEPPPTAPTLLTVLAYSLLPIG 147
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,538,866
Number of Sequences: 37866
Number of extensions: 456383
Number of successful extensions: 1090
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1049
Number of HSP's gapped (non-prelim): 80
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.