BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|157419120 transmembrane protein 177 [Homo sapiens] (311 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|157419120 transmembrane protein 177 [Homo sapiens] 636 0.0 gi|157419116 transmembrane protein 177 [Homo sapiens] 636 0.0 gi|157419118 transmembrane protein 177 [Homo sapiens] 636 0.0 gi|207452735 epiplakin 1 [Homo sapiens] 33 0.42 gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 32 0.94 gi|38373671 SEC24-related protein C [Homo sapiens] 31 1.6 gi|38373669 SEC24-related protein C [Homo sapiens] 31 1.6 gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho... 30 2.7 gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 30 2.7 gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] 30 3.6 gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo ... 29 4.7 gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ... 29 4.7 gi|164565408 common-site lymphoma/leukemia guanine nucleotide ex... 29 4.7 gi|158303333 synaptopodin isoform B [Homo sapiens] 29 6.1 gi|40353727 synaptopodin isoform A [Homo sapiens] 29 6.1 >gi|157419120 transmembrane protein 177 [Homo sapiens] Length = 311 Score = 636 bits (1641), Expect = 0.0 Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ Sbjct: 1 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60 Query: 61 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH Sbjct: 61 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120 Query: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT Sbjct: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180 Query: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA Sbjct: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240 Query: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ Sbjct: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300 Query: 301 MWRGMLNPGRS 311 MWRGMLNPGRS Sbjct: 301 MWRGMLNPGRS 311 >gi|157419116 transmembrane protein 177 [Homo sapiens] Length = 311 Score = 636 bits (1641), Expect = 0.0 Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ Sbjct: 1 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60 Query: 61 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH Sbjct: 61 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120 Query: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT Sbjct: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180 Query: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA Sbjct: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240 Query: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ Sbjct: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300 Query: 301 MWRGMLNPGRS 311 MWRGMLNPGRS Sbjct: 301 MWRGMLNPGRS 311 >gi|157419118 transmembrane protein 177 [Homo sapiens] Length = 311 Score = 636 bits (1641), Expect = 0.0 Identities = 311/311 (100%), Positives = 311/311 (100%) Query: 1 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ Sbjct: 1 MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60 Query: 61 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH Sbjct: 61 LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120 Query: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT Sbjct: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180 Query: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA Sbjct: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240 Query: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ Sbjct: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300 Query: 301 MWRGMLNPGRS 311 MWRGMLNPGRS Sbjct: 301 MWRGMLNPGRS 311 >gi|207452735 epiplakin 1 [Homo sapiens] Length = 5090 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 233 RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290 RR S S + G G E L G L+ + D K Y + + L K P Sbjct: 2712 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 2771 Query: 291 YTTRRDSVLQ-MWRGMLNPG 309 + S+ Q MW+G+L PG Sbjct: 2772 GRQEKMSIYQAMWKGVLRPG 2791 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 233 RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290 RR S S + G G E L G L+ + D K Y + + L K P Sbjct: 3246 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 3305 Query: 291 YTTRRDSVLQ-MWRGMLNPG 309 + S+ Q MW+G+L PG Sbjct: 3306 GRQEKMSIYQAMWKGVLRPG 3325 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 233 RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290 RR S S + G G E L G L+ + D K Y + + L K P Sbjct: 3780 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 3839 Query: 291 YTTRRDSVLQ-MWRGMLNPG 309 + S+ Q MW+G+L PG Sbjct: 3840 GRQEKMSIYQAMWKGVLRPG 3859 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 233 RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290 RR S S + G G E L G L+ + D K Y + + L K P Sbjct: 4314 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 4373 Query: 291 YTTRRDSVLQ-MWRGMLNPG 309 + S+ Q MW+G+L PG Sbjct: 4374 GRQEKMSIYQAMWKGVLRPG 4393 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 233 RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290 RR S S + G G E L G L+ + D K Y + + L K P Sbjct: 4848 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 4907 Query: 291 YTTRRDSVLQ-MWRGMLNPG 309 + S+ Q MW+G+L PG Sbjct: 4908 GRQEKMSIYQAMWKGVLRPG 4927 Score = 29.3 bits (64), Expect = 4.7 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Query: 235 TASLSAAYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTR 294 TAS + A E + L +G + L+ D K Y + + L K P Sbjct: 2182 TASELLSSAIITEEMLQDLETGRSTTQELMEDDRVKRYLEGTSCIAGVLVPAKDQPGRQE 2241 Query: 295 RDSVLQ-MWRGMLNPG 309 + S+ Q MW+G+L PG Sbjct: 2242 KMSIYQAMWKGVLRPG 2257 >gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo sapiens] Length = 5537 Score = 31.6 bits (70), Expect = 0.94 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Query: 56 PLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGI 106 PLPPQ L Q L P C P P+S P P G VVG+ Sbjct: 1019 PLPPQCSPLLQHSLVPQNSPPSQCSPPAL-----PLSVPSPLSPIGKVVGV 1064 >gi|38373671 SEC24-related protein C [Homo sapiens] Length = 1094 Score = 30.8 bits (68), Expect = 1.6 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Query: 45 LYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVV 104 LY +PQGQ PL + G+ + P +F P ++G PRLP+ Sbjct: 178 LYGSYPQGQAPPL--------SQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGP 229 Query: 105 GIPA-SFLGDLVINTNH 120 +P SF G V NH Sbjct: 230 LLPGQSFGGPSVSQPNH 246 >gi|38373669 SEC24-related protein C [Homo sapiens] Length = 1094 Score = 30.8 bits (68), Expect = 1.6 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Query: 45 LYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVV 104 LY +PQGQ PL + G+ + P +F P ++G PRLP+ Sbjct: 178 LYGSYPQGQAPPL--------SQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGP 229 Query: 105 GIPA-SFLGDLVINTNH 120 +P SF G V NH Sbjct: 230 LLPGQSFGGPSVSQPNH 246 >gi|57863281 Meis1, myeloid ecotropic viral integration site 1 homolog 3 isoform 1 [Homo sapiens] Length = 421 Score = 30.0 bits (66), Expect = 2.7 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 26 GLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTT 85 G+ P + FP+ V Y P P PLPP L S + ++ GH P Sbjct: 13 GIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDS--DGLKREKDEIYGHPLFPLLA 70 Query: 86 FTFQ--PVSAGFPRLPAGAVVGIP 107 F+ ++ PR AGA +G P Sbjct: 71 LVFEKCELATCSPRDGAGAGLGTP 94 >gi|57863279 Meis1, myeloid ecotropic viral integration site 1 homolog 3 isoform 2 [Homo sapiens] Length = 358 Score = 30.0 bits (66), Expect = 2.7 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 26 GLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTT 85 G+ P + FP+ V Y P P PLPP L S + ++ GH P Sbjct: 13 GIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDS--DGLKREKDEIYGHPLFPLLA 70 Query: 86 FTFQ--PVSAGFPRLPAGAVVGIP 107 F+ ++ PR AGA +G P Sbjct: 71 LVFEKCELATCSPRDGAGAGLGTP 94 >gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] Length = 132 Score = 29.6 bits (65), Expect = 3.6 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Query: 50 PQGQPAPLPPQLQSLFQEVLQDIGVPSGH 78 P P PLPP + SL + +L+ +GVP H Sbjct: 68 PSPHPHPLPPDIMSL-KRMLEKLGVPKTH 95 >gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo sapiens] Length = 684 Score = 29.3 bits (64), Expect = 4.7 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 49 WPQGQPAPLPPQLQSLFQ-EVLQDIGVPSGH---CYKPFTTFTFQPVSAGFPR-LPAGAV 103 WP +P+P P Q Q + + P G C P T + P A R + G + Sbjct: 389 WPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSRPVQLGGL 448 Query: 104 VGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLRASL 143 V P FLG +I G SP G R R + Sbjct: 449 VPFPPKFLG----------LIMGRGAGKVSPLGLRARVKI 478 >gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo sapiens] Length = 909 Score = 29.3 bits (64), Expect = 4.7 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 15/100 (15%) Query: 49 WPQGQPAPLPPQLQSLFQ-EVLQDIGVPSGH---CYKPFTTFTFQPVSAGFPR-LPAGAV 103 WP +P+P P Q Q + + P G C P T + P A R + G + Sbjct: 389 WPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSRPVQLGGL 448 Query: 104 VGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLRASL 143 V P FLG +I G SP G R R + Sbjct: 449 VPFPPKFLG----------LIMGRGAGKVSPLGLRARVKI 478 >gi|164565408 common-site lymphoma/leukemia guanine nucleotide exchange factor [Homo sapiens] Length = 1386 Score = 29.3 bits (64), Expect = 4.7 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Query: 70 QDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNHPVVIHGHTV 129 +D+ P C +P ++ S P+ P + +P L DL I P+ HG + Sbjct: 1062 RDVQGPDPVCSQPIQPLSWHGSSLD-PQGPGDTLPPLPCH-LPDLQIPGTSPLPAHGSHL 1119 Query: 130 DWRSPAGARLRASLTL 145 D R PA A L S L Sbjct: 1120 DHRIPANAPLSLSQEL 1135 >gi|158303333 synaptopodin isoform B [Homo sapiens] Length = 685 Score = 28.9 bits (63), Expect = 6.1 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 14/133 (10%) Query: 51 QGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASF 110 Q PAP P ++ S +V Q++ PS P + + P + + P VV P S Sbjct: 52 QSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVV--PQSL 109 Query: 111 -LGDLVINTNHPVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVH 169 L + N++ + T P+ TL + Q A A EV ST + Sbjct: 110 PLSSIQQNSSEAQLPSNGTGPASKPS--------TLCADGQPQAPAEEV---RCSTLLID 158 Query: 170 ALLAPACLAGTWA 182 + PA T++ Sbjct: 159 KVSTPATTTSTFS 171 >gi|40353727 synaptopodin isoform A [Homo sapiens] Length = 903 Score = 28.9 bits (63), Expect = 6.1 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 14/133 (10%) Query: 51 QGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASF 110 Q PAP P ++ S +V Q++ PS P + + P + + P VV P S Sbjct: 52 QSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVV--PQSL 109 Query: 111 -LGDLVINTNHPVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVH 169 L + N++ + T P+ TL + Q A A EV ST + Sbjct: 110 PLSSIQQNSSEAQLPSNGTGPASKPS--------TLCADGQPQAPAEEV---RCSTLLID 158 Query: 170 ALLAPACLAGTWA 182 + PA T++ Sbjct: 159 KVSTPATTTSTFS 171 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.137 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,676,041 Number of Sequences: 37866 Number of extensions: 614098 Number of successful extensions: 1455 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 1445 Number of HSP's gapped (non-prelim): 22 length of query: 311 length of database: 18,247,518 effective HSP length: 102 effective length of query: 209 effective length of database: 14,385,186 effective search space: 3006503874 effective search space used: 3006503874 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.