Guide to the Human Genome
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Search of human proteins with 157419120

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157419120 transmembrane protein 177 [Homo sapiens]
         (311 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157419120 transmembrane protein 177 [Homo sapiens]                 636   0.0  
gi|157419116 transmembrane protein 177 [Homo sapiens]                 636   0.0  
gi|157419118 transmembrane protein 177 [Homo sapiens]                 636   0.0  
gi|207452735 epiplakin 1 [Homo sapiens]                                33   0.42 
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    32   0.94 
gi|38373671 SEC24-related protein C [Homo sapiens]                     31   1.6  
gi|38373669 SEC24-related protein C [Homo sapiens]                     31   1.6  
gi|57863281 Meis1, myeloid ecotropic viral integration site 1 ho...    30   2.7  
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho...    30   2.7  
gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens]    30   3.6  
gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo ...    29   4.7  
gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ...    29   4.7  
gi|164565408 common-site lymphoma/leukemia guanine nucleotide ex...    29   4.7  
gi|158303333 synaptopodin isoform B [Homo sapiens]                     29   6.1  
gi|40353727 synaptopodin isoform A [Homo sapiens]                      29   6.1  

>gi|157419120 transmembrane protein 177 [Homo sapiens]
          Length = 311

 Score =  636 bits (1641), Expect = 0.0
 Identities = 311/311 (100%), Positives = 311/311 (100%)

Query: 1   MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60
           MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ
Sbjct: 1   MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60

Query: 61  LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120
           LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH
Sbjct: 61  LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120

Query: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180
           PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT
Sbjct: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180

Query: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240
           WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA
Sbjct: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240

Query: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300
           AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ
Sbjct: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300

Query: 301 MWRGMLNPGRS 311
           MWRGMLNPGRS
Sbjct: 301 MWRGMLNPGRS 311


>gi|157419116 transmembrane protein 177 [Homo sapiens]
          Length = 311

 Score =  636 bits (1641), Expect = 0.0
 Identities = 311/311 (100%), Positives = 311/311 (100%)

Query: 1   MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60
           MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ
Sbjct: 1   MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60

Query: 61  LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120
           LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH
Sbjct: 61  LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120

Query: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180
           PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT
Sbjct: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180

Query: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240
           WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA
Sbjct: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240

Query: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300
           AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ
Sbjct: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300

Query: 301 MWRGMLNPGRS 311
           MWRGMLNPGRS
Sbjct: 301 MWRGMLNPGRS 311


>gi|157419118 transmembrane protein 177 [Homo sapiens]
          Length = 311

 Score =  636 bits (1641), Expect = 0.0
 Identities = 311/311 (100%), Positives = 311/311 (100%)

Query: 1   MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60
           MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ
Sbjct: 1   MAGPLWRTAAFVQRHRTGLLVGSCAGLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQ 60

Query: 61  LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120
           LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH
Sbjct: 61  LQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNH 120

Query: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180
           PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT
Sbjct: 121 PVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVHALLAPACLAGT 180

Query: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240
           WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA
Sbjct: 181 WALGVGAKYTLGLHAGPMNLRAAFSLVAAVAGFVAYAFSQDSLTHAVESWLDRRTASLSA 240

Query: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300
           AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ
Sbjct: 241 AYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTRRDSVLQ 300

Query: 301 MWRGMLNPGRS 311
           MWRGMLNPGRS
Sbjct: 301 MWRGMLNPGRS 311


>gi|207452735 epiplakin 1 [Homo sapiens]
          Length = 5090

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 233  RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290
            RR  S S  +  G  G E    L  G   L+ +   D  K Y    + +   L   K  P
Sbjct: 2712 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 2771

Query: 291  YTTRRDSVLQ-MWRGMLNPG 309
                + S+ Q MW+G+L PG
Sbjct: 2772 GRQEKMSIYQAMWKGVLRPG 2791



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 233  RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290
            RR  S S  +  G  G E    L  G   L+ +   D  K Y    + +   L   K  P
Sbjct: 3246 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 3305

Query: 291  YTTRRDSVLQ-MWRGMLNPG 309
                + S+ Q MW+G+L PG
Sbjct: 3306 GRQEKMSIYQAMWKGVLRPG 3325



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 233  RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290
            RR  S S  +  G  G E    L  G   L+ +   D  K Y    + +   L   K  P
Sbjct: 3780 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 3839

Query: 291  YTTRRDSVLQ-MWRGMLNPG 309
                + S+ Q MW+G+L PG
Sbjct: 3840 GRQEKMSIYQAMWKGVLRPG 3859



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 233  RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290
            RR  S S  +  G  G E    L  G   L+ +   D  K Y    + +   L   K  P
Sbjct: 4314 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 4373

Query: 291  YTTRRDSVLQ-MWRGMLNPG 309
                + S+ Q MW+G+L PG
Sbjct: 4374 GRQEKMSIYQAMWKGVLRPG 4393



 Score = 32.7 bits (73), Expect = 0.42
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 233  RRTASLSAAYACG--GVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLP 290
            RR  S S  +  G  G E    L  G   L+ +   D  K Y    + +   L   K  P
Sbjct: 4848 RRQVSASELHTSGILGPETLRDLAQGTKTLQEVTEMDSVKRYLEGTSCIAGVLVPAKDQP 4907

Query: 291  YTTRRDSVLQ-MWRGMLNPG 309
                + S+ Q MW+G+L PG
Sbjct: 4908 GRQEKMSIYQAMWKGVLRPG 4927



 Score = 29.3 bits (64), Expect = 4.7
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 235  TASLSAAYACGGVEFYEKLLSGNLALRSLLGKDGEKLYTPSGNIVPRHLFRIKHLPYTTR 294
            TAS   + A    E  + L +G    + L+  D  K Y    + +   L   K  P    
Sbjct: 2182 TASELLSSAIITEEMLQDLETGRSTTQELMEDDRVKRYLEGTSCIAGVLVPAKDQPGRQE 2241

Query: 295  RDSVLQ-MWRGMLNPG 309
            + S+ Q MW+G+L PG
Sbjct: 2242 KMSIYQAMWKGVLRPG 2257


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 31.6 bits (70), Expect = 0.94
 Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 56   PLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGI 106
            PLPPQ   L Q  L     P   C  P       P+S   P  P G VVG+
Sbjct: 1019 PLPPQCSPLLQHSLVPQNSPPSQCSPPAL-----PLSVPSPLSPIGKVVGV 1064


>gi|38373671 SEC24-related protein C [Homo sapiens]
          Length = 1094

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 45  LYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVV 104
           LY  +PQGQ  PL         +     G+ +     P    +F P ++G PRLP+    
Sbjct: 178 LYGSYPQGQAPPL--------SQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGP 229

Query: 105 GIPA-SFLGDLVINTNH 120
            +P  SF G  V   NH
Sbjct: 230 LLPGQSFGGPSVSQPNH 246


>gi|38373669 SEC24-related protein C [Homo sapiens]
          Length = 1094

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 45  LYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVV 104
           LY  +PQGQ  PL         +     G+ +     P    +F P ++G PRLP+    
Sbjct: 178 LYGSYPQGQAPPL--------SQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGP 229

Query: 105 GIPA-SFLGDLVINTNH 120
            +P  SF G  V   NH
Sbjct: 230 LLPGQSFGGPSVSQPNH 246


>gi|57863281 Meis1, myeloid ecotropic viral integration site 1
           homolog 3 isoform 1 [Homo sapiens]
          Length = 421

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 26  GLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTT 85
           G+   P +   FP+ V      Y P   P PLPP L S    + ++     GH   P   
Sbjct: 13  GIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDS--DGLKREKDEIYGHPLFPLLA 70

Query: 86  FTFQ--PVSAGFPRLPAGAVVGIP 107
             F+   ++   PR  AGA +G P
Sbjct: 71  LVFEKCELATCSPRDGAGAGLGTP 94


>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
           homolog 3 isoform 2 [Homo sapiens]
          Length = 358

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 26  GLFGVPISYHLFPDPVVQWLYQYWPQGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTT 85
           G+   P +   FP+ V      Y P   P PLPP L S    + ++     GH   P   
Sbjct: 13  GIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDS--DGLKREKDEIYGHPLFPLLA 70

Query: 86  FTFQ--PVSAGFPRLPAGAVVGIP 107
             F+   ++   PR  AGA +G P
Sbjct: 71  LVFEKCELATCSPRDGAGAGLGTP 94


>gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo
          sapiens]
          Length = 132

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 50 PQGQPAPLPPQLQSLFQEVLQDIGVPSGH 78
          P   P PLPP + SL + +L+ +GVP  H
Sbjct: 68 PSPHPHPLPPDIMSL-KRMLEKLGVPKTH 95


>gi|239750685 PREDICTED: hypothetical protein XP_002347506 [Homo
           sapiens]
          Length = 684

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 49  WPQGQPAPLPPQLQSLFQ-EVLQDIGVPSGH---CYKPFTTFTFQPVSAGFPR-LPAGAV 103
           WP  +P+P P Q     Q + +     P G    C  P  T +  P  A   R +  G +
Sbjct: 389 WPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSRPVQLGGL 448

Query: 104 VGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLRASL 143
           V  P  FLG          +I G      SP G R R  +
Sbjct: 449 VPFPPKFLG----------LIMGRGAGKVSPLGLRARVKI 478


>gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo
           sapiens]
          Length = 909

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 28/100 (28%), Positives = 37/100 (37%), Gaps = 15/100 (15%)

Query: 49  WPQGQPAPLPPQLQSLFQ-EVLQDIGVPSGH---CYKPFTTFTFQPVSAGFPR-LPAGAV 103
           WP  +P+P P Q     Q + +     P G    C  P  T +  P  A   R +  G +
Sbjct: 389 WPHAKPSPPPSQEARCHQGQAVTGWHQPCGEPVTCRLPVPTHSLGPSKAPRSRPVQLGGL 448

Query: 104 VGIPASFLGDLVINTNHPVVIHGHTVDWRSPAGARLRASL 143
           V  P  FLG          +I G      SP G R R  +
Sbjct: 449 VPFPPKFLG----------LIMGRGAGKVSPLGLRARVKI 478


>gi|164565408 common-site lymphoma/leukemia guanine nucleotide
            exchange factor [Homo sapiens]
          Length = 1386

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 70   QDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASFLGDLVINTNHPVVIHGHTV 129
            +D+  P   C +P    ++   S   P+ P   +  +P   L DL I    P+  HG  +
Sbjct: 1062 RDVQGPDPVCSQPIQPLSWHGSSLD-PQGPGDTLPPLPCH-LPDLQIPGTSPLPAHGSHL 1119

Query: 130  DWRSPAGARLRASLTL 145
            D R PA A L  S  L
Sbjct: 1120 DHRIPANAPLSLSQEL 1135


>gi|158303333 synaptopodin isoform B [Homo sapiens]
          Length = 685

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 14/133 (10%)

Query: 51  QGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASF 110
           Q  PAP P ++ S   +V Q++  PS     P +  +  P +    + P   VV  P S 
Sbjct: 52  QSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVV--PQSL 109

Query: 111 -LGDLVINTNHPVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVH 169
            L  +  N++   +    T     P+        TL  + Q  A A EV     ST  + 
Sbjct: 110 PLSSIQQNSSEAQLPSNGTGPASKPS--------TLCADGQPQAPAEEV---RCSTLLID 158

Query: 170 ALLAPACLAGTWA 182
            +  PA    T++
Sbjct: 159 KVSTPATTTSTFS 171


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 14/133 (10%)

Query: 51  QGQPAPLPPQLQSLFQEVLQDIGVPSGHCYKPFTTFTFQPVSAGFPRLPAGAVVGIPASF 110
           Q  PAP P ++ S   +V Q++  PS     P +  +  P +    + P   VV  P S 
Sbjct: 52  QSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVV--PQSL 109

Query: 111 -LGDLVINTNHPVVIHGHTVDWRSPAGARLRASLTLSREAQKFALAREVVYLESSTTAVH 169
            L  +  N++   +    T     P+        TL  + Q  A A EV     ST  + 
Sbjct: 110 PLSSIQQNSSEAQLPSNGTGPASKPS--------TLCADGQPQAPAEEV---RCSTLLID 158

Query: 170 ALLAPACLAGTWA 182
            +  PA    T++
Sbjct: 159 KVSTPATTTSTFS 171


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.137    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,676,041
Number of Sequences: 37866
Number of extensions: 614098
Number of successful extensions: 1455
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1445
Number of HSP's gapped (non-prelim): 22
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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