LOC136157 6152

Name: LOC136157	Sequence: fasta or formatted (194aa)		NCBI GI: 157384994
Description: hypothetical protein LOC136157		Referenced in: RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.1 6 1 C cysteine 4.6 9 1 D aspartate 5.7 11 2 E glutamate 9.8 19 2 F phenylalanine 5.2 10 2 G glycine 4.6 9 1 H histidine 3.6 7 1 I isoleucine 5.7 11 1 K lysine 3.6 7 1 L leucine 9.8 19 3 M methionine 3.1 6 1 N asparagine 3.6 7 1 P proline 3.6 7 1 Q glutamine 4.1 8 2 R arginine 7.7 15 2 S serine 6.2 12 2 T threonine 5.2 10 2 V valine 7.7 15 2 W tryptophan 0.0 0 0 Y tyrosine 3.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC136157 SSU72 0.704 Ssu72 RNA polymerase II CTD phosphatase homolog [Homo... LOC286528 0.648 PREDICTED: similar to Ssu72 RNA polymerase II CTD p... LOC286528 0.648 PREDICTED: similar to Ssu72 RNA polymerase II CTD ph... LOC286528 0.648 PREDICTED: similar to Ssu72 RNA polymerase II CTD ph... NUP160 0.011 nucleoporin 160kDa FEM1B 0.008 fem-1 homolog b USP11 0.008 ubiquitin specific peptidase 11 ALS2CL 0.008 ALS2 C-terminal like isoform 1 PDCD4 0.005 programmed cell death 4 isoform 2 PDCD4 0.005 programmed cell death 4 isoform 1 HMMR 0.005 hyaluronan-mediated motility receptor isoform d [Ho... HMMR 0.005 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.005 hyaluronan-mediated motility receptor isoform c [Ho... HMMR 0.005 hyaluronan-mediated motility receptor isoform b [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.