Guide to the Human Genome
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Search of human proteins with 15718702

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15718702 caspase 7 isoform beta [Homo sapiens]
         (253 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15718702 caspase 7 isoform beta [Homo sapiens]                     520   e-148
gi|15718698 caspase 7 isoform delta [Homo sapiens]                    306   1e-83
gi|15718700 caspase 7 isoform alpha [Homo sapiens]                    306   1e-83
gi|4502581 caspase 7 isoform alpha precursor [Homo sapiens]           306   1e-83
gi|14790115 caspase 3 preproprotein [Homo sapiens]                     92   6e-19
gi|14790119 caspase 3 preproprotein [Homo sapiens]                     92   6e-19
gi|122056476 caspase 8 isoform G precursor [Homo sapiens]              70   2e-12
gi|122056474 caspase 8 isoform C precursor [Homo sapiens]              70   2e-12
gi|15718708 caspase 8 isoform C precursor [Homo sapiens]               70   2e-12
gi|15718706 caspase 8 isoform B precursor [Homo sapiens]               70   2e-12
gi|15718704 caspase 8 isoform A precursor [Homo sapiens]               70   2e-12
gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens]          65   7e-11
gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens]          65   7e-11
gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens]          63   2e-10
gi|14790124 caspase 9 isoform alpha preproprotein [Homo sapiens]       63   2e-10
gi|14916483 caspase 6 isoform alpha preproprotein [Homo sapiens]       62   6e-10
gi|40789270 zinc finger protein 573 [Homo sapiens]                     44   1e-04
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ...    41   9e-04
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ...    41   9e-04
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ...    41   9e-04
gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens]           40   0.001
gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...    40   0.003
gi|209870079 caspase 5 isoform f precursor [Homo sapiens]              37   0.013
gi|209870073 caspase 5 isoform c [Homo sapiens]                        37   0.013
gi|209870071 caspase 5 isoform b precursor [Homo sapiens]              37   0.013
gi|209870069 caspase 5 isoform a precursor [Homo sapiens]              37   0.013
gi|238908517 colony stimulating factor 2 receptor alpha chain is...    37   0.022
gi|150378454 sarcoglycan, epsilon isoform 1 [Homo sapiens]             36   0.037
gi|149588643 zinc finger protein 283 [Homo sapiens]                    36   0.037
gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]      35   0.048

>gi|15718702 caspase 7 isoform beta [Homo sapiens]
          Length = 253

 Score =  520 bits (1339), Expect = e-148
 Identities = 253/253 (100%), Positives = 253/253 (100%)

Query: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60
           MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY
Sbjct: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60

Query: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120
           NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ
Sbjct: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120

Query: 121 DLLKKASEEDHTNAACFACILLSHGEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPSL 180
           DLLKKASEEDHTNAACFACILLSHGEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPSL
Sbjct: 121 DLLKKASEEDHTNAACFACILLSHGEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPSL 180

Query: 181 MMASRPTRGPSMTQMLILDTRSQWKLTSSSPIPRFQAITRGGAQEEAPGLCKPSAPSWRS 240
           MMASRPTRGPSMTQMLILDTRSQWKLTSSSPIPRFQAITRGGAQEEAPGLCKPSAPSWRS
Sbjct: 181 MMASRPTRGPSMTQMLILDTRSQWKLTSSSPIPRFQAITRGGAQEEAPGLCKPSAPSWRS 240

Query: 241 TEKTWKSCRSSPG 253
           TEKTWKSCRSSPG
Sbjct: 241 TEKTWKSCRSSPG 253


>gi|15718698 caspase 7 isoform delta [Homo sapiens]
          Length = 336

 Score =  306 bits (783), Expect = 1e-83
 Identities = 148/149 (99%), Positives = 149/149 (100%)

Query: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60
           MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY
Sbjct: 34  MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 93

Query: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120
           NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ
Sbjct: 94  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 153

Query: 121 DLLKKASEEDHTNAACFACILLSHGEENM 149
           DLLKKASEEDHTNAACFACILLSHGEEN+
Sbjct: 154 DLLKKASEEDHTNAACFACILLSHGEENV 182


>gi|15718700 caspase 7 isoform alpha [Homo sapiens]
          Length = 303

 Score =  306 bits (783), Expect = 1e-83
 Identities = 148/149 (99%), Positives = 149/149 (100%)

Query: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60
           MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY
Sbjct: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60

Query: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120
           NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ
Sbjct: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120

Query: 121 DLLKKASEEDHTNAACFACILLSHGEENM 149
           DLLKKASEEDHTNAACFACILLSHGEEN+
Sbjct: 121 DLLKKASEEDHTNAACFACILLSHGEENV 149


>gi|4502581 caspase 7 isoform alpha precursor [Homo sapiens]
          Length = 303

 Score =  306 bits (783), Expect = 1e-83
 Identities = 148/149 (99%), Positives = 149/149 (100%)

Query: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60
           MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY
Sbjct: 1   MADDQGCIEEQGVEDSANEDSVDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQY 60

Query: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120
           NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ
Sbjct: 61  NMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQ 120

Query: 121 DLLKKASEEDHTNAACFACILLSHGEENM 149
           DLLKKASEEDHTNAACFACILLSHGEEN+
Sbjct: 121 DLLKKASEEDHTNAACFACILLSHGEENV 149


>gi|14790115 caspase 3 preproprotein [Homo sapiens]
          Length = 277

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 43/90 (47%), Positives = 63/90 (70%)

Query: 60  YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119
           Y M++ ++G CIIINNKNF K TGM  R+GTD DA  L + FR+L ++V   ND +  ++
Sbjct: 37  YKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEI 96

Query: 120 QDLLKKASEEDHTNAACFACILLSHGEENM 149
            +L++  S+EDH+  + F C+LLSHGEE +
Sbjct: 97  VELMRDVSKEDHSKRSSFVCVLLSHGEEGI 126


>gi|14790119 caspase 3 preproprotein [Homo sapiens]
          Length = 277

 Score = 91.7 bits (226), Expect = 6e-19
 Identities = 43/90 (47%), Positives = 63/90 (70%)

Query: 60  YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119
           Y M++ ++G CIIINNKNF K TGM  R+GTD DA  L + FR+L ++V   ND +  ++
Sbjct: 37  YKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEI 96

Query: 120 QDLLKKASEEDHTNAACFACILLSHGEENM 149
            +L++  S+EDH+  + F C+LLSHGEE +
Sbjct: 97  VELMRDVSKEDHSKRSSFVCVLLSHGEEGI 126


>gi|122056476 caspase 8 isoform G precursor [Homo sapiens]
          Length = 538

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 60  YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112
           Y M  +  G C+IINN NF        K+  +  RNGT  DA AL   F  L F++  ++
Sbjct: 285 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 344

Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149
           DC+  ++ ++LK     DH+N  CF C +LSHG++ +
Sbjct: 345 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 381


>gi|122056474 caspase 8 isoform C precursor [Homo sapiens]
          Length = 464

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 60  YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112
           Y M  +  G C+IINN NF        K+  +  RNGT  DA AL   F  L F++  ++
Sbjct: 211 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 270

Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149
           DC+  ++ ++LK     DH+N  CF C +LSHG++ +
Sbjct: 271 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 307


>gi|15718708 caspase 8 isoform C precursor [Homo sapiens]
          Length = 464

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 60  YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112
           Y M  +  G C+IINN NF        K+  +  RNGT  DA AL   F  L F++  ++
Sbjct: 211 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 270

Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149
           DC+  ++ ++LK     DH+N  CF C +LSHG++ +
Sbjct: 271 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 307


>gi|15718706 caspase 8 isoform B precursor [Homo sapiens]
          Length = 479

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 60  YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112
           Y M  +  G C+IINN NF        K+  +  RNGT  DA AL   F  L F++  ++
Sbjct: 226 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 285

Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149
           DC+  ++ ++LK     DH+N  CF C +LSHG++ +
Sbjct: 286 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 322


>gi|15718704 caspase 8 isoform A precursor [Homo sapiens]
          Length = 496

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 60  YNMNFEKLGKCIIINNKNF-------DKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYN 112
           Y M  +  G C+IINN NF        K+  +  RNGT  DA AL   F  L F++  ++
Sbjct: 243 YQMKSKPRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD 302

Query: 113 DCSCAKMQDLLKKASEEDHTNAACFACILLSHGEENM 149
           DC+  ++ ++LK     DH+N  CF C +LSHG++ +
Sbjct: 303 DCTVEQIYEILKIYQLMDHSNMDCFICCILSHGDKGI 339


>gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens]
          Length = 522

 Score = 64.7 bits (156), Expect = 7e-11
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%)

Query: 33  PSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDK 92
           PSL S+  +  +  ++ +         Y MN    G C+I+NN +F   T +  R GT K
Sbjct: 249 PSLVSRGMQGASANTLNSETSTKRAAVYRMNRNHRGLCVIVNNHSF---TSLKDRQGTHK 305

Query: 93  DAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKAS-EEDHTNAACFACILLSHGEENMES 151
           DAE L   F+ LGF V ++N+ +  +M+ +L+K      H +  CF   +L+HG      
Sbjct: 306 DAEILSHVFQWLGFTVHIHNNVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVY 365

Query: 152 CSVTQAGVQRRDL----GRLQPPPPRLAEGPSL 180
            S  +A +  R++      LQ   PRLAE P L
Sbjct: 366 SS-DEALIPIREIMSHFTALQ--CPRLAEKPKL 395


>gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens]
          Length = 521

 Score = 64.7 bits (156), Expect = 7e-11
 Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 11/153 (7%)

Query: 33  PSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDK 92
           PSL S+  +  +  ++ +         Y MN    G C+I+NN +F   T +  R GT K
Sbjct: 249 PSLVSRGMQGASANTLNSETSTKRAAVYRMNRNHRGLCVIVNNHSF---TSLKDRQGTHK 305

Query: 93  DAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKAS-EEDHTNAACFACILLSHGEENMES 151
           DAE L   F+ LGF V ++N+ +  +M+ +L+K      H +  CF   +L+HG      
Sbjct: 306 DAEILSHVFQWLGFTVHIHNNVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVY 365

Query: 152 CSVTQAGVQRRDL----GRLQPPPPRLAEGPSL 180
            S  +A +  R++      LQ   PRLAE P L
Sbjct: 366 SS-DEALIPIREIMSHFTALQ--CPRLAEKPKL 395


>gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens]
          Length = 479

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 12/151 (7%)

Query: 36  FSKKKKNVTMRSIKTTRDRVPTYQ-YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDA 94
           +  +++ V+   +KT  + +P    Y MN    G C+I+NN +F   T +  R GT KDA
Sbjct: 208 YQGEEELVSQTDVKTFLEALPRAAVYRMNRNHRGLCVIVNNHSF---TSLKDRQGTHKDA 264

Query: 95  EALFKCFRSLGFDVIVYNDCSCAKMQDLLKKAS-EEDHTNAACFACILLSHGEENMESCS 153
           E L   F+ LGF V ++N+ +  +M+ +L+K      H +  CF   +L+HG       S
Sbjct: 265 EILSHVFQWLGFTVHIHNNVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVYSS 324

Query: 154 VTQAGVQRRDL----GRLQPPPPRLAEGPSL 180
             +A +  R++      LQ   PRLAE P L
Sbjct: 325 -DEALIPIREIMSHFTALQ--CPRLAEKPKL 352


>gi|14790124 caspase 9 isoform alpha preproprotein [Homo sapiens]
          Length = 416

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 33/86 (38%), Positives = 49/86 (56%)

Query: 60  YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119
           Y ++ E  G C+IINN NF + +G+  R G++ D E L + F SL F V V  D +  KM
Sbjct: 153 YILSMEPCGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFSSLHFMVEVKGDLTAKKM 212

Query: 120 QDLLKKASEEDHTNAACFACILLSHG 145
              L + +++DH    C   ++LSHG
Sbjct: 213 VLALLELAQQDHGALDCCVVVILSHG 238


>gi|14916483 caspase 6 isoform alpha preproprotein [Homo sapiens]
          Length = 293

 Score = 61.6 bits (148), Expect = 6e-10
 Identities = 31/93 (33%), Positives = 48/93 (51%)

Query: 56  PTYQYNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCS 115
           P  +Y M+  + G  +I N++ F     +  R GT  D + L + F  LGF+V  +ND  
Sbjct: 33  PAEKYKMDHRRRGIALIFNHERFFWHLTLPERRGTCADRDNLTRRFSDLGFEVKCFNDLK 92

Query: 116 CAKMQDLLKKASEEDHTNAACFACILLSHGEEN 148
             ++   + + S   H +A CF C+ LSHGE N
Sbjct: 93  AEELLLKIHEVSTVSHADADCFVCVFLSHGEGN 125


>gi|40789270 zinc finger protein 573 [Homo sapiens]
          Length = 607

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/28 (71%), Positives = 21/28 (75%)

Query: 149 MESCSVTQAGVQRRDLGRLQPPPPRLAE 176
           MESCSV QAGVQ  DL  LQPPPPR  +
Sbjct: 1   MESCSVAQAGVQWPDLSSLQPPPPRFKQ 28


>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%)

Query: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172
           MESCSVTQAGVQ   DLG LQPPPP
Sbjct: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151


>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%)

Query: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172
           MESCSVTQAGVQ   DLG LQPPPP
Sbjct: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151


>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
           sapiens]
          Length = 299

 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 21/25 (84%), Positives = 21/25 (84%), Gaps = 1/25 (4%)

Query: 149 MESCSVTQAGVQ-RRDLGRLQPPPP 172
           MESCSVTQAGVQ   DLG LQPPPP
Sbjct: 127 MESCSVTQAGVQWCDDLGSLQPPPP 151


>gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens]
          Length = 452

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 60  YNMNFEKLGKCIIINNKNFDKVTGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKM 119
           Y +     G  ++++N +F     +  R+G D D   L   F+ LG+DV V  D +  +M
Sbjct: 192 YRLQSRPRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVLCDQTAQEM 251

Query: 120 QDLLKK-ASEEDHTNAACFACILLSHGEE 147
           Q+ L+  A    H         LLSHG E
Sbjct: 252 QEKLQNFAQLPAHRVTDSCIVALLSHGVE 280


>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
           sapiens]
          Length = 165

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 19/24 (79%), Positives = 19/24 (79%)

Query: 149 MESCSVTQAGVQRRDLGRLQPPPP 172
           MES  V QAGVQ RDLG LQPPPP
Sbjct: 27  MESRCVPQAGVQWRDLGSLQPPPP 50


>gi|209870079 caspase 5 isoform f precursor [Homo sapiens]
          Length = 447

 Score = 37.4 bits (85), Expect = 0.013
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 22  VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81
           ++A P  S+   ++     +   +R  K   D +  Y      ++    +II N  FD +
Sbjct: 162 IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 219

Query: 82  TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140
                RNG   D   + +  + LG+ V+   + +   M+ +L+  A+  +H ++     +
Sbjct: 220 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 276

Query: 141 LLSHG 145
           L+SHG
Sbjct: 277 LMSHG 281


>gi|209870073 caspase 5 isoform c [Homo sapiens]
          Length = 292

 Score = 37.4 bits (85), Expect = 0.013
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 22  VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81
           ++A P  S+   ++     +   +R  K   D +  Y      ++    +II N  FD +
Sbjct: 7   IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 64

Query: 82  TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140
                RNG   D   + +  + LG+ V+   + +   M+ +L+  A+  +H ++     +
Sbjct: 65  PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 121

Query: 141 LLSHG 145
           L+SHG
Sbjct: 122 LMSHG 126


>gi|209870071 caspase 5 isoform b precursor [Homo sapiens]
          Length = 376

 Score = 37.4 bits (85), Expect = 0.013
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 22  VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81
           ++A P  S+   ++     +   +R  K   D +  Y      ++    +II N  FD +
Sbjct: 91  IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 148

Query: 82  TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140
                RNG   D   + +  + LG+ V+   + +   M+ +L+  A+  +H ++     +
Sbjct: 149 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 205

Query: 141 LLSHG 145
           L+SHG
Sbjct: 206 LMSHG 210


>gi|209870069 caspase 5 isoform a precursor [Homo sapiens]
          Length = 434

 Score = 37.4 bits (85), Expect = 0.013
 Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 22  VDAKPDRSSFVPSLFSKKKKNVTMRSIKTTRDRVPTYQYNMNFEKLGKCIIINNKNFDKV 81
           ++A P  S+   ++     +   +R  K   D +  Y      ++    +II N  FD +
Sbjct: 149 IEAGPPESAESTNILKLCPREEFLRLCKKNHDEI--YPIKKREDRRRLALIICNTKFDHL 206

Query: 82  TGMGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKK-ASEEDHTNAACFACI 140
                RNG   D   + +  + LG+ V+   + +   M+ +L+  A+  +H ++     +
Sbjct: 207 PA---RNGAHYDIVGMKRLLQGLGYTVVDEKNLTARDMESVLRAFAARPEHKSSDSTFLV 263

Query: 141 LLSHG 145
           L+SHG
Sbjct: 264 LMSHG 268


>gi|238908517 colony stimulating factor 2 receptor alpha chain
           isoform f precursor [Homo sapiens]
          Length = 434

 Score = 36.6 bits (83), Expect = 0.022
 Identities = 18/24 (75%), Positives = 19/24 (79%)

Query: 151 SCSVTQAGVQRRDLGRLQPPPPRL 174
           S SVTQAGVQ  +LG LQPP PRL
Sbjct: 317 SHSVTQAGVQWHNLGSLQPPSPRL 340


>gi|150378454 sarcoglycan, epsilon isoform 1 [Homo sapiens]
          Length = 462

 Score = 35.8 bits (81), Expect = 0.037
 Identities = 16/20 (80%), Positives = 16/20 (80%)

Query: 154 VTQAGVQRRDLGRLQPPPPR 173
           V QAGVQ  DLG LQPPPPR
Sbjct: 424 VAQAGVQWSDLGSLQPPPPR 443


>gi|149588643 zinc finger protein 283 [Homo sapiens]
          Length = 679

 Score = 35.8 bits (81), Expect = 0.037
 Identities = 18/24 (75%), Positives = 18/24 (75%)

Query: 149 MESCSVTQAGVQRRDLGRLQPPPP 172
           MES SV QAGVQ  DLG LQ PPP
Sbjct: 1   MESRSVAQAGVQWCDLGSLQAPPP 24


>gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 140

 Score = 35.4 bits (80), Expect = 0.048
 Identities = 18/35 (51%), Positives = 21/35 (60%)

Query: 145 GEENMESCSVTQAGVQRRDLGRLQPPPPRLAEGPS 179
           G   MES  VTQAGV+  DLG LQ  PP   + P+
Sbjct: 103 GISEMESHYVTQAGVKWHDLGSLQTLPPSFKDSPT 137


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.130    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,301,622
Number of Sequences: 37866
Number of extensions: 549698
Number of successful extensions: 1953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1889
Number of HSP's gapped (non-prelim): 76
length of query: 253
length of database: 18,247,518
effective HSP length: 100
effective length of query: 153
effective length of database: 14,460,918
effective search space: 2212520454
effective search space used: 2212520454
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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