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Search of human proteins with 156627559
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156627559 tenomodulin [Homo sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156627559 tenomodulin [Homo sapiens] 676 0.0
gi|59806343 leukocyte cell derived chemotaxin 1 isoform 2 precur... 197 1e-50
gi|5901932 leukocyte cell derived chemotaxin 1 isoform 1 precurs... 194 7e-50
gi|59858535 trefoil factor interactions(z) 1 [Homo sapiens] 39 0.005
gi|241666448 RIB43A domain with coiled-coils 2 [Homo sapiens] 39 0.006
gi|10880975 hypothetical protein LOC57821 [Homo sapiens] 34 0.15
gi|38570142 membrane protein, palmitoylated 5 [Homo sapiens] 33 0.43
gi|164414437 netrin G1 isoform 2 [Homo sapiens] 32 0.97
gi|164414431 netrin G1 isoform 1 [Homo sapiens] 32 0.97
gi|54312078 netrin G1 isoform 3 [Homo sapiens] 32 0.97
gi|56549662 salivary amylase alpha 1B precursor [Homo sapiens] 31 1.3
gi|4502085 pancreatic amylase alpha 2A precursor [Homo sapiens] 31 1.3
gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo s... 31 1.3
gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo... 31 1.3
gi|56549660 salivary amylase alpha 1A precursor [Homo sapiens] 31 1.3
gi|40254482 salivary amylase alpha 1A precursor [Homo sapiens] 31 1.3
gi|10280622 amylase, pancreatic, alpha-2B precursor [Homo sapiens] 31 1.3
gi|56549664 salivary amylase alpha 1C precursor [Homo sapiens] 31 1.3
gi|148728162 protein tyrosine phosphatase, receptor type, J isof... 30 3.7
gi|190014607 netrin G2 [Homo sapiens] 30 3.7
gi|45827701 pad-1-like [Homo sapiens] 29 4.8
gi|156627563 regulator of G-protein signaling 7 [Homo sapiens] 29 6.3
gi|33598958 ADP-ribosylation factor-like 2-like 1 isoform 2 [Hom... 29 6.3
gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom... 29 6.3
gi|123701922 hypothetical protein LOC285596 [Homo sapiens] 28 8.2
>gi|156627559 tenomodulin [Homo sapiens]
Length = 317
Score = 676 bits (1745), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MAKNPPENCEDCHILNAEAFKSKKICKSLKICGLVFGILALTLIVLFWGSKHFWPEVPKK 60
MAKNPPENCEDCHILNAEAFKSKKICKSLKICGLVFGILALTLIVLFWGSKHFWPEVPKK
Sbjct: 1 MAKNPPENCEDCHILNAEAFKSKKICKSLKICGLVFGILALTLIVLFWGSKHFWPEVPKK 60
Query: 61 AYDMEHTFYSNGEKKKIYMEIDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKC 120
AYDMEHTFYSNGEKKKIYMEIDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKC
Sbjct: 61 AYDMEHTFYSNGEKKKIYMEIDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKC 120
Query: 121 FIKTQIKVIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDN 180
FIKTQIKVIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDN
Sbjct: 121 FIKTQIKVIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDN 180
Query: 181 VTMYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASE 240
VTMYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASE
Sbjct: 181 VTMYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASE 240
Query: 241 EELPINDYTENGIEFDPMLDERGYCCIYCRRGNRYCRRVCEPLLGYYPYPYCYQGGRVIC 300
EELPINDYTENGIEFDPMLDERGYCCIYCRRGNRYCRRVCEPLLGYYPYPYCYQGGRVIC
Sbjct: 241 EELPINDYTENGIEFDPMLDERGYCCIYCRRGNRYCRRVCEPLLGYYPYPYCYQGGRVIC 300
Query: 301 RVIMPCNWWVARMLGRV 317
RVIMPCNWWVARMLGRV
Sbjct: 301 RVIMPCNWWVARMLGRV 317
>gi|59806343 leukocyte cell derived chemotaxin 1 isoform 2 precursor
[Homo sapiens]
Length = 333
Score = 197 bits (500), Expect = 1e-50
Identities = 113/307 (36%), Positives = 169/307 (55%), Gaps = 15/307 (4%)
Query: 21 KSKKICKSLKICGLVFGILALTLIVLFWGSKHFWPEVPKKAYDMEHTFYSNGEKKKIYME 80
K + LK+ +V A+ L+ G+ +FW Y++ +T NG+ + ME
Sbjct: 32 KPSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGSDSHIYNVHYTMSINGKLQDGSME 91
Query: 81 IDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKCFIKTQIKV-IPEFSEPEEEI 139
ID E F+ G+G +E + V+DF+NG TGI F G +KC+IK Q+K IPE ++
Sbjct: 92 IDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVTKQS 151
Query: 140 D----ENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTMYWINPTLISVSE 195
E + + + E S+IWV ++P+++ FL +SK+LE+C ++ ++W+ PT E
Sbjct: 152 ISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFL-SSKVLELCGDLPIFWLKPTY--PKE 208
Query: 196 LQDFEEEGEDLHFPANEKK---GIEQNEQWVVPQVKVEKTRHARQASEEELPINDYTENG 252
+Q E P K+ G N ++ E ++ S+ P N Y + G
Sbjct: 209 IQRERREVVRKIVPTTTKRPHSGPRSNPG--AGRLNNETRPSVQEDSQAFNPDNPYHQEG 266
Query: 253 --IEFDPMLDERGYCCIYCRRGNRYCRRVCEPLLGYYPYPYCYQGGRVICRVIMPCNWWV 310
+ FDP LD G CCI CRR +C+++CEPL GYYP+PY YQG R CRVIMPC+WWV
Sbjct: 267 ESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACRVIMPCSWWV 326
Query: 311 ARMLGRV 317
AR+LG V
Sbjct: 327 ARILGMV 333
>gi|5901932 leukocyte cell derived chemotaxin 1 isoform 1 precursor
[Homo sapiens]
Length = 334
Score = 194 bits (494), Expect = 7e-50
Identities = 111/311 (35%), Positives = 166/311 (53%), Gaps = 22/311 (7%)
Query: 21 KSKKICKSLKICGLVFGILALTLIVLFWGSKHFWPEVPKKAYDMEHTFYSNGEKKKIYME 80
K + LK+ +V A+ L+ G+ +FW Y++ +T NG+ + ME
Sbjct: 32 KPSSPARLLKVGAVVLISGAVLLLFGAIGAFYFWKGSDSHIYNVHYTMSINGKLQDGSME 91
Query: 81 IDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKCFIKTQIKV-IPEFSEPEEEI 139
ID E F+ G+G +E + V+DF+NG TGI F G +KC+IK Q+K IPE ++
Sbjct: 92 IDAGNNLETFKMGSGAEEAIAVNDFQNGITGIRFAGGEKCYIKAQVKARIPEVGAVTKQS 151
Query: 140 D----ENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTMYWINPTLISVSE 195
E + + + E S+IWV ++P+++ FL +SK+LE+C ++ ++W+ PT E
Sbjct: 152 ISSKLEGKIMPVKYEENSLIWVAVDQPVKDNSFL-SSKVLELCGDLPIFWLKPTY--PKE 208
Query: 196 LQDFEEEGEDLHFPANEKK---------GIEQNEQWVVPQVKVEKTRHARQASEEELPIN 246
+Q E P K+ G + P V+ + QA + P +
Sbjct: 209 IQRERREVVRKIVPTTTKRPHSGPRSNPGAGRLNNETRPSVQEDS-----QAFNPDNPYH 263
Query: 247 DYTENGIEFDPMLDERGYCCIYCRRGNRYCRRVCEPLLGYYPYPYCYQGGRVICRVIMPC 306
+ FDP LD G CCI CRR +C+++CEPL GYYP+PY YQG R CRVIMPC
Sbjct: 264 QQEGESMTFDPRLDHEGICCIECRRSYTHCQKICEPLGGYYPWPYNYQGCRSACRVIMPC 323
Query: 307 NWWVARMLGRV 317
+WWVAR+LG V
Sbjct: 324 SWWVARILGMV 334
>gi|59858535 trefoil factor interactions(z) 1 [Homo sapiens]
Length = 184
Score = 39.3 bits (90), Expect = 0.005
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 70 SNGEKKKIYMEIDPVTRTEIFRSGNGTDETLEVHDFKNGYTGIYFVGLQKCFI-KTQIKV 128
+NG + + ID T I G+ + + D+K+GY + + CFI K +
Sbjct: 31 NNGGNVQETVTIDNEKNTAIINIHAGSCSSTTIFDYKHGYIASRVLSRRACFILKMDHQN 90
Query: 129 IPEFSEPEEEIDENEEITTTFFEQSVIWV---PAEKPIENRD-FLKNSKILEICDNVTMY 184
IP + + I E + + F WV P E I++ D FL S I ++C ++ +Y
Sbjct: 91 IPPLNNLQWYIYEKQAL-DNMFSSKYTWVKYNPLESLIKDVDWFLLGSPIEKLCKHIPLY 149
>gi|241666448 RIB43A domain with coiled-coils 2 [Homo sapiens]
Length = 377
Score = 38.9 bits (89), Expect = 0.006
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 160 EKPIENRDFLKNSKILEICDNVTMYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQN 219
+KP R+F + + D N ++S +Q F GEDL+F +K EQN
Sbjct: 102 QKPETRREFDLSDPLALKKDLPARQSDNDVRNTISGMQKFM--GEDLNFHERKKFQEEQN 159
Query: 220 EQWVVPQVKVEKTRHARQASEEELPINDYTENGIEFD 256
+W + Q + K A Q E L YTE ++FD
Sbjct: 160 REWSLQQQREWKNARAEQKCAEAL----YTETRLQFD 192
>gi|10880975 hypothetical protein LOC57821 [Homo sapiens]
Length = 508
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 123 KTQIKVIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVT 182
K+ +I E EE I+++ + T E + +K +++ + + I+ +
Sbjct: 32 KSDASIIEMACEKEENINQDLKENETVMEHTKRHSDPDKSLQDEVSPRRNDIISV----- 86
Query: 183 MYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASEEE 242
P + + + D + E +K +E+ E V + +EK A + + +
Sbjct: 87 -----PGIQPLDPISDSDSENSFQESKLESQKDLEEEEDEEVRRYIMEKIVQANKLLQNQ 141
Query: 243 LPINDYTENGIEFDPML 259
P+ND E ++F L
Sbjct: 142 EPVNDKRERKLKFKDQL 158
>gi|38570142 membrane protein, palmitoylated 5 [Homo sapiens]
Length = 675
Score = 32.7 bits (73), Expect = 0.43
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 163 IENRDFLKNSKILEICDNVTMYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQW 222
++N+DF KI V M +P +S QD +E + + P + K+G E
Sbjct: 154 VQNKDFQNAFKIHNAI-TVHMNKASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTALL 212
Query: 223 VVPQVKVEKTRHARQASEEELPINDYTENGIEFDPMLDERGY 264
P ++ H + A +E ++ +P+ DER Y
Sbjct: 213 NTPHIQALLLAHDKVAEQE-----------MQLEPITDERVY 243
>gi|164414437 netrin G1 isoform 2 [Homo sapiens]
Length = 480
Score = 31.6 bits (70), Expect = 0.97
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 130 PEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTM 183
PE + P E + + E + F QS W KP++ L SK +E+ DN+ +
Sbjct: 97 PELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 150
>gi|164414431 netrin G1 isoform 1 [Homo sapiens]
Length = 539
Score = 31.6 bits (70), Expect = 0.97
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 130 PEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTM 183
PE + P E + + E + F QS W KP++ L SK +E+ DN+ +
Sbjct: 97 PELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 150
>gi|54312078 netrin G1 isoform 3 [Homo sapiens]
Length = 438
Score = 31.6 bits (70), Expect = 0.97
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 130 PEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTM 183
PE + P E + + E + F QS W KP++ L SK +E+ DN+ +
Sbjct: 97 PELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 150
>gi|56549662 salivary amylase alpha 1B precursor [Homo sapiens]
Length = 511
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 50 SKHFWPEVPKKAYDMEHTFYSN----GEKKKIYMEI-----DPVTRTEIFRSGNGTD 97
SKH WP K D H SN G K IY E+ +P+ ++ F +G T+
Sbjct: 214 SKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTE 270
>gi|4502085 pancreatic amylase alpha 2A precursor [Homo sapiens]
Length = 511
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 50 SKHFWPEVPKKAYDMEHTFYSN----GEKKKIYMEI-----DPVTRTEIFRSGNGTD 97
SKH WP K D H SN G K IY E+ +P+ ++ F +G T+
Sbjct: 214 SKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTE 270
>gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo
sapiens]
Length = 731
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 113 YFVGLQKCFIKTQIKVIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNS 172
+F L++C+ T++ I + S ++DE +E + F + + P D S
Sbjct: 363 HFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSV-RPLATLSYASDLYNGS 421
Query: 173 KILEI------CDNVTMYWINPTLISVSELQDFEEEGEDLHFPANE 212
I+ CD + + I V E ++ D+H+P NE
Sbjct: 422 SIVSSIEFDRDCDYFAIAGVTKK-IKVYEYDTVIQDAVDIHYPENE 466
>gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo
sapiens]
Length = 707
Score = 31.2 bits (69), Expect = 1.3
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Query: 113 YFVGLQKCFIKTQIKVIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNS 172
+F L++C+ T++ I + S ++DE +E + F + + P D S
Sbjct: 339 HFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSV-RPLATLSYASDLYNGS 397
Query: 173 KILEI------CDNVTMYWINPTLISVSELQDFEEEGEDLHFPANE 212
I+ CD + + I V E ++ D+H+P NE
Sbjct: 398 SIVSSIEFDRDCDYFAIAGVTKK-IKVYEYDTVIQDAVDIHYPENE 442
>gi|56549660 salivary amylase alpha 1A precursor [Homo sapiens]
Length = 511
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 50 SKHFWPEVPKKAYDMEHTFYSN----GEKKKIYMEI-----DPVTRTEIFRSGNGTD 97
SKH WP K D H SN G K IY E+ +P+ ++ F +G T+
Sbjct: 214 SKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTE 270
>gi|40254482 salivary amylase alpha 1A precursor [Homo sapiens]
Length = 511
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 50 SKHFWPEVPKKAYDMEHTFYSN----GEKKKIYMEI-----DPVTRTEIFRSGNGTD 97
SKH WP K D H SN G K IY E+ +P+ ++ F +G T+
Sbjct: 214 SKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTE 270
>gi|10280622 amylase, pancreatic, alpha-2B precursor [Homo sapiens]
Length = 511
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 50 SKHFWPEVPKKAYDMEHTFYSN----GEKKKIYMEI-----DPVTRTEIFRSGNGTD 97
SKH WP K D H SN G K IY E+ +P+ ++ F +G T+
Sbjct: 214 SKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTE 270
>gi|56549664 salivary amylase alpha 1C precursor [Homo sapiens]
Length = 511
Score = 31.2 bits (69), Expect = 1.3
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 50 SKHFWPEVPKKAYDMEHTFYSN----GEKKKIYMEI-----DPVTRTEIFRSGNGTD 97
SKH WP K D H SN G K IY E+ +P+ ++ F +G T+
Sbjct: 214 SKHMWPGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTE 270
>gi|148728162 protein tyrosine phosphatase, receptor type, J isoform 1
precursor [Homo sapiens]
Length = 1337
Score = 29.6 bits (65), Expect = 3.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 31 ICGLVFGILALTLIVLFWGSKHFWPEVPKKAYDMEHTFYSNGEKKKIYMEID 82
ICG VFG + L+++ G FW + K A + E +F KK + ++
Sbjct: 973 ICGAVFGCIFGALVIVTVGGFIFWRKKRKDAKNNEVSFSQIKPKKSKLIRVE 1024
>gi|190014607 netrin G2 [Homo sapiens]
Length = 530
Score = 29.6 bits (65), Expect = 3.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 130 PEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIENRDFLKNSKILEICDNVTM 183
P+ + P + + EE + QS+ W P+E L +K +E+ D+V M
Sbjct: 86 PDLAHPPRLMFDKEEEGLATYWQSITWSRYPSPLEANITLSWNKTVELTDDVVM 139
>gi|45827701 pad-1-like [Homo sapiens]
Length = 2298
Score = 29.3 bits (64), Expect = 4.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 185 WINPTLISVSE---LQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASEE 241
W N S E + + +E G + H P ++ +++ W + + EK + SEE
Sbjct: 1028 WFNRKKTSFREACAVPEPQESGSEEHLPLSQFTTVDREAIWAEVEKEPEKYPLRGELSEE 1087
Query: 242 ELP 244
ELP
Sbjct: 1088 ELP 1090
>gi|156627563 regulator of G-protein signaling 7 [Homo sapiens]
Length = 487
Score = 28.9 bits (63), Expect = 6.3
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 192 SVSELQDFEEEGEDLHFPANEKKGIEQNE-QWVVPQVKVEKTRHARQASEEELPINDYTE 250
SV LQ+ H P E K ++E Q + +++ RH + S+ + YTE
Sbjct: 229 SVYGLQNDIRSHSPTHTPTPETKPPTEDELQQQIKYWQIQLDRHRLKMSKVADSLLSYTE 288
Query: 251 NGIEFDPML 259
+E+DP L
Sbjct: 289 QYLEYDPFL 297
>gi|33598958 ADP-ribosylation factor-like 2-like 1 isoform 2 [Homo
sapiens]
Length = 321
Score = 28.9 bits (63), Expect = 6.3
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 183 MYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASEEE 242
+YW+ + +DF+ E + E++ +E+ E+ + +V K R R+ +E+E
Sbjct: 76 LYWLLHVIA-----RDFDALNERIQKETTEQRALEEQEKQERAE-RVRKLREERKQNEQE 129
Query: 243 LPINDYTENGIEFDP 257
D T E DP
Sbjct: 130 QAELDGTSGLAELDP 144
>gi|33598956 ADP-ribosylation factor-like 2-like 1 isoform 1 [Homo
sapiens]
Length = 428
Score = 28.9 bits (63), Expect = 6.3
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 183 MYWINPTLISVSELQDFEEEGEDLHFPANEKKGIEQNEQWVVPQVKVEKTRHARQASEEE 242
+YW+ + +DF+ E + E++ +E+ E+ + +V K R R+ +E+E
Sbjct: 183 LYWLLHVIA-----RDFDALNERIQKETTEQRALEEQEKQERAE-RVRKLREERKQNEQE 236
Query: 243 LPINDYTENGIEFDP 257
D T E DP
Sbjct: 237 QAELDGTSGLAELDP 251
>gi|123701922 hypothetical protein LOC285596 [Homo sapiens]
Length = 310
Score = 28.5 bits (62), Expect = 8.2
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 128 VIPEFSEPEEEIDENEEITTTFFEQSVIWVPAEKPIEN-RDFLKNSKILEICDNVTMYWI 186
V+ E S E ++ EE+ T+ + VP +E+ + + + E V M +
Sbjct: 150 VLQELSSYNGEEEDPEEVKTS------LGVPQRGDLEDLEEHVPGQTVSEEATGVHMMQV 203
Query: 187 NPTLISVSELQDFEE 201
+P ++ S+L+D EE
Sbjct: 204 DPATLAKSDLEDLEE 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.140 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,650,974
Number of Sequences: 37866
Number of extensions: 653824
Number of successful extensions: 1660
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1641
Number of HSP's gapped (non-prelim): 25
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.