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Search of human proteins with 11056032
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11056032 protocadherin gamma subfamily A, 1 isoform 1
precursor [Homo sapiens]
(931 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1845 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1590 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1417 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1385 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1382 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1375 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1371 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1357 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1353 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1350 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1348 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1345 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1305 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1163 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1132 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1131 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1125 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1123 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1103 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1102 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1100 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1099 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1094 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1056 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 931 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 922 0.0
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs... 912 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 911 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 903 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 896 0.0
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1845 bits (4778), Expect = 0.0
Identities = 931/931 (100%), Positives = 931/931 (100%)
Query: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA
Sbjct: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
Query: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE
Sbjct: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
Query: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
Query: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
Query: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
Query: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
Query: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
Query: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
Query: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
Query: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 781 SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1590 bits (4118), Expect = 0.0
Identities = 807/807 (100%), Positives = 807/807 (100%)
Query: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA
Sbjct: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
Query: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE
Sbjct: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
Query: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
Query: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
Query: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
Query: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
Query: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
Query: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
Query: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
Query: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKKGFLSAPQSLLEDKKEPFSQ 807
SQESCEKKGFLSAPQSLLEDKKEPFSQ
Sbjct: 781 SQESCEKKGFLSAPQSLLEDKKEPFSQ 807
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1417 bits (3668), Expect = 0.0
Identities = 712/932 (76%), Positives = 797/932 (85%), Gaps = 1/932 (0%)
Query: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
M +KL C +L+LLC L L EA AG I YSV EE D+GSFVGNIAKDLGL+P LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
+ GVRIVSRGR LFALNPRSGSL+TA RIDREELCAQS PCL++FNIL+EDK+ ++ VE
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
VEI DINDN P+F +EELE K++E TTPG R+ L D DVG N+LQ Y L+ N HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
DV++GADG ++PE+VL+ LDREEEAVHHL+L ASDGG+PV SGT RI ++V+DANDN P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
FTQ +Y I++PEN +GT++L V ATD DEG +V Y +++F L S +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
++ + LD+E+ + ++++AQDG GL+ + KV++ VLDVNDNAPE +TS T++V E+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
PGTII L +VHD+DSG N +TTC +P +LPFKLEK VDNYYRLVT R LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
T+TA D G P+LST+ HI L V DINDN+P F + SYS YIPENNPRGAS+FSV AHD D
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
SN+NA +TYS EDT+QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+Q+ V+ARDSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLF+LDQNDNAPEILYPA PTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
TVAVADRI DILADLGSLEPSA PNDSDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGG L M SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKKGFLSAPQSLL-EDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
SQESCEKK FLSAPQSLL E+++E FSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1385 bits (3584), Expect = 0.0
Identities = 698/923 (75%), Positives = 783/923 (84%)
Query: 9 GCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVS 68
GC L+L + L L E G+G I YS+PEE DKGSFVGNIAKDLGL+PQELA+ GVRIVS
Sbjct: 9 GCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVS 68
Query: 69 RGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDIND 128
RGR LFALNPRSGSL+TA RIDREELCAQS C+V+FNILVE+KMK++ VEVEIIDIND
Sbjct: 69 RGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDIND 128
Query: 129 NTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADG 188
N P+F+ EEL+ K+NE GTR+ LPF +D DVG+NSL+SYQLSSN HFSLDV G DG
Sbjct: 129 NFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDG 188
Query: 189 PQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYH 248
++PE+VL+ PLDRE+E VH L+LTA DGG+PV SGT I + V+DANDN P FT ++Y
Sbjct: 189 QKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYS 248
Query: 249 INVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLD 308
++VPEN+P+GT+LLM+ ATDPDEG NG++TYSF N + ++++ F+LDS GEIS + LD
Sbjct: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLD 308
Query: 309 FEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIAL 368
+EE + Y MEV AQDG L+A KV++ V DVNDNAPEV +TS+T+++ E+ PGT+IAL
Sbjct: 309 YEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIAL 368
Query: 369 ISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQG 428
SVHD DSG+NG C IP NLPFKLEK VDNYY L+T R LDRE S YNIT+T +D G
Sbjct: 369 FSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHG 428
Query: 429 TPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQIT 488
TP LSTE+HI L V D+NDN P F Q SYS + ENNPRG SIFSV AHD DS +NA++T
Sbjct: 429 TPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVT 488
Query: 489 YSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSL 548
YSL EDT QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+QL V A DSG+PPLSSNVSL
Sbjct: 489 YSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSL 548
Query: 549 SLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
SLF+LDQNDN PEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRL
Sbjct: 549 SLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 608
Query: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668
LKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRI
Sbjct: 609 LKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRI 668
Query: 669 SDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728
DILADLGS++ P D DLTLYLVVA AAVSCVFLAFVIVLL RLRRWHKSRLLQA
Sbjct: 669 PDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAE 728
Query: 729 GGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKK 788
G LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK
Sbjct: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKS 788
Query: 789 GFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
L + +K+E QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 789 EPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1382 bits (3577), Expect = 0.0
Identities = 703/920 (76%), Positives = 784/920 (85%), Gaps = 1/920 (0%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L LLC L L E G+G I YSV EE DKGSFVGNIA DLGL+P+ELA+ GVRIVSRGR
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LF+LNP+SGSL+TA RIDREELCAQ CLV NILVEDK+K+F VE+EI DINDN P
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
F EELE K+ E+T PGTR + D DVG+NSLQ+Y+LS N +FSL V ++G ++P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDRE++ +H L+L ASDGG+PV SG L I + V+DANDNPP FTQ +Y ++V
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
ENVP+GT+LL VNATDPDEG N +V+Y + ++A+IF L+S +GE+S + LD+E+
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Y ++++AQDG GL+++ K+L+ VLDVNDNAPE+TITS+T++VPE G IALI VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
D+DSG NG F+ GNLPFKLEK +D YYRLVT +LDRE IS YNI++ A D G+P L
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
STETHI+L V DINDN P F SYSAYIPENNPRGASIFSV A D DSN NA+ITY+L
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
EDT+QGAPLS+++SINS+TGVLYALRSFDYEQFRD++L V A DSG+PPLSSNVSL+LF+
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI DIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
ADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
AS PGSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK L
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 APQSLLEDKKEP-FSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
Q LLE K + QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 912 GKAPAGGNGNKKKSGKKEKK 931
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1375 bits (3559), Expect = 0.0
Identities = 706/922 (76%), Positives = 776/922 (84%), Gaps = 1/922 (0%)
Query: 11 SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70
S +LL L L A A I YS+PEE +KGSFVGNI KDLGL+PQELA+ GVRIVSRG
Sbjct: 11 SEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRG 70
Query: 71 RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130
RM LF+LNPR+GSL+TA RIDREELCAQS CLVSFNILVEDK+ L+PVEVEI+DINDNT
Sbjct: 71 RMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNT 130
Query: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190
P+F EELE K+ E P +R L D DVGMNSLQ ++LS N HFS+DVQ A GP+
Sbjct: 131 PRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPK 190
Query: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250
+PE+VL+ LDRE EAV+ L+LTA DGG+PVRS +I + V+D NDN P FTQ Y ++
Sbjct: 191 YPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVS 250
Query: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310
VPEN+P+GT +L V ATD DEG +GEVTYSF + +++QIF L+ TGEIS LD+E
Sbjct: 251 VPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYE 310
Query: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370
+ Y + V+A+DG GL + KVLI +LDVNDN PEV +TS + + E+ PPGT+IAL
Sbjct: 311 DSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQ 370
Query: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430
V D+DSG NG TC IP +LPF+LEK V NYYRLVT LDRE + YNIT+TA D+GTP
Sbjct: 371 VFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTP 430
Query: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490
LSTET ISL V D NDN P F SYS Y+ ENNPRGASIFSV A D D ++NAQ++YS
Sbjct: 431 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYS 490
Query: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550
L EDT+QGAPLS+Y+SINSDTG+LYALRSFDYEQ RD+QL V A DSGDPPLSSNVSLSL
Sbjct: 491 LAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSL 550
Query: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
F+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670
ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
ILADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RL+RWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGG 730
Query: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790
GLASMPGSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK
Sbjct: 731 GLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEP 790
Query: 791 LSAPQSLLEDKKEPFS-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 849
L Q LLE K EP QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 791 LLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
Query: 850 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 909
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
Query: 910 RDGKAPAGGNGNKKKSGKKEKK 931
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 RDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1371 bits (3549), Expect = 0.0
Identities = 703/932 (75%), Positives = 773/932 (82%), Gaps = 9/932 (0%)
Query: 5 KKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGV 64
K+ CS L+LLCL + EAGA I YS+PEE +KGSFVGNI+KDLGL P+ELA+ GV
Sbjct: 9 KESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGV 68
Query: 65 RIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEII 124
RIVSRGR LF+LNPRSGSLITA RIDREELCAQS C+VSFNILVED++KLF +E+E+
Sbjct: 69 RIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVT 128
Query: 125 DINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQ 184
DINDN P+FQ E L+ K+NE G R LP D DVG+NSLQSYQLS N HFSL VQ
Sbjct: 129 DINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQS 188
Query: 185 GADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQ 244
A+G ++PE+VL+ LDREEEA+HHL+LTASDGG+P+RSGT+ + + V DANDN P FT
Sbjct: 189 RANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTL 248
Query: 245 AQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNK 304
+Y ++VPEN+P+GTQLL V ATD DEGANGEVTYSF + F+L+ YTGEI
Sbjct: 249 PEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKIS 308
Query: 305 EPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGT 364
E LD+EE Y +E+QA+DG +A KVLI V DVNDN+PE+TITS+ + V E+ P GT
Sbjct: 309 ENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGT 368
Query: 365 IIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITA 424
++AL++VHD DS NG TC I LPFKLEK +D+YYRLV R LDRE +S YNIT+TA
Sbjct: 369 VVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTA 428
Query: 425 IDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNEN 484
D G+P LSTE H L V DINDN P F Q SY YIPENN RGASIFSV A D DS EN
Sbjct: 429 TDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKEN 488
Query: 485 AQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSS 544
AQI YSL EDTIQG PLS+Y+SINSDTGVLYALRSFDYEQF ++Q++V A DSGDPPLSS
Sbjct: 489 AQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSS 548
Query: 545 NVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWL 604
NVSLSLF+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWL
Sbjct: 549 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 608
Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
SYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV
Sbjct: 609 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 668
Query: 665 ADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRL 724
AD I +LADLGS E A SDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWHKSRL
Sbjct: 669 ADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRL 728
Query: 725 LQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 784
LQASGGGL + GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES
Sbjct: 729 LQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 788
Query: 785 CEKKGFLSAPQSLLEDKKEPFSQ-----QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
CEK + P SLL+D K P QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 789 CEK----NDPLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 844
Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 845 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 904
Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 905 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 936
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1357 bits (3511), Expect = 0.0
Identities = 690/921 (74%), Positives = 773/921 (83%)
Query: 11 SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70
+RL+ +CL L +L+E A I YSV EE ++GS VGNIAKDLGL P+ELA+ GVRIVSRG
Sbjct: 11 TRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRG 70
Query: 71 RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130
R LFALNPRSG+L+TA RIDREELC +S C+ + IL+ED +K+ VEVEIID+NDN
Sbjct: 71 RTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNP 130
Query: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190
P F E+ E K+ E PG R LP D DVG+NSLQ YQL+SN +FSLDVQ GADG +
Sbjct: 131 PSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIK 190
Query: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250
+PE+VL+ LDREEEAVHHL+LTA DGG+PVRSGT RI I +VD NDN P FTQ +YH++
Sbjct: 191 YPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVS 250
Query: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310
V ENVP+GT+LL V ATDPDEGANG+VTYSF V +++Q+F+L+S +G+I+ LD+E
Sbjct: 251 VRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYE 310
Query: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370
+ Y ++V+A DG GL A+ KVL+ VLD NDNAPEVT+TS+T++V E+ PGT+IAL +
Sbjct: 311 DSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFN 370
Query: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430
VHD DSG NG TC IP NLPF LEK NYYRL+T RTLDRE +S YNIT+TA DQGTP
Sbjct: 371 VHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTP 430
Query: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490
LSTETHISL V DINDN P F SYSAYIPENNPRGASI S+ A D DS +NA+ITYS
Sbjct: 431 PLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYS 490
Query: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550
L EDT QGAPLS+Y+SINS+TG+LYAL SFDYEQFRD+QL + A DSGDPPLSSNVSLSL
Sbjct: 491 LAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSL 550
Query: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
F+LDQNDN PEILYP PTDGSTGVELAP SA+ GYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670
+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVAD I D
Sbjct: 611 SSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
+LADLGSL+PSA P+DS LTLYLVVA AAVSCVFLAFV VLLA +LRRWHKSRLL A G
Sbjct: 671 VLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGS 730
Query: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790
LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEK
Sbjct: 731 RLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEP 790
Query: 791 LSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 850
L Q LLE K +P QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 791 LLITQDLLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 850
Query: 851 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 910
ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 851 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 910
Query: 911 DGKAPAGGNGNKKKSGKKEKK 931
DGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 DGKAPAGGNGNKKKSGKKEKK 931
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1353 bits (3501), Expect = 0.0
Identities = 692/920 (75%), Positives = 766/920 (83%), Gaps = 1/920 (0%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L+LL + L L E G I YSVPEE +KGS VG+I++DLGL+P+ELA+ GVRI+ RGR
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LFALNPRSGSL+TA RIDREELC ++ C ++ +IL+EDK+K++ VEVE+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
F+ ELE K++E R LP D D+G NSLQSY+LS N HFSL VQ GADG ++P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDREE+A HHL+LTASDGG+PVR+GT RI + V+DANDN PAF Q +Y +VP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
EN+ LGTQLL+VNATDPDEG N EV YSF VD + AQ+F+LD +G IS LD EE
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Y MEVQA D AG A+ KVLI VLDVNDNAPEV +TS+ ++VPEN P GT+IAL++V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
DQDS +NG CFI GNLPFKLEK NYY LVT+ LDRE + YNIT+TA D+GTP L
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
STETHISL V D NDN PVF Q SYSAYIPENNPRG S+ SV AHD D ENAQITYSL
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
E+TIQGA LS+Y+SINSDTGVLYAL SFDYEQFRD+Q+KVMARD+G PPLSSNVSLSLF+
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDLTLYLVVA AAVSCVFLAFVI+LLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK-KGFL 791
P SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK + L
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 792 SAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
+ S+ +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 912 GKAPAGGNGNKKKSGKKEKK 931
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1350 bits (3493), Expect = 0.0
Identities = 691/918 (75%), Positives = 766/918 (83%), Gaps = 1/918 (0%)
Query: 15 LLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPL 74
LL + L EA AG I YSV EETDKGSFVG+IAKDLGL+P+ELA+ GVRI+SRGR L
Sbjct: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
Query: 75 FALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQ 134
FALN RSGSL+TA RIDREE+CAQS CLV+FNIL+EDKM L+P++VEIIDINDN P+F
Sbjct: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
Query: 135 LEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEM 194
EE+ K+ E T PG R L D DVG NSLQSYQLS N HFSL VQ G D ++PE+
Sbjct: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
Query: 195 VLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPEN 254
VL+ LDREEE VHHL+LTASDGG+P RS T I + VVD ND+ P F+ QY + VPEN
Sbjct: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
Query: 255 VPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKM 314
VP+GT+LL V+A D DEG NGEVTYSF + ++ ++F L+S TGEIS E LD+EE
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
Query: 315 YSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQ 374
Y MEVQAQDG G + K KVLI VLDVNDNAPEVT+TS+++++PE+ P GT+IAL + D+
Sbjct: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Query: 375 DSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALST 434
DSG NG TC IP NLPFKLEK +DNYYRLVT + LDRE +S YNIT+ A D GTP LS
Sbjct: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
Query: 435 ETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIED 494
ETHI + V D NDN P F SYS YI ENNPRGASIF V A D DS +NAQITYSL ED
Sbjct: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
Query: 495 TIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLD 554
TIQGAP+S+Y+SINSDTGVLYAL+SFDYEQ R++QL+V A DSGDPPLSSN+SLSLF+LD
Sbjct: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAP SAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++LAD
Sbjct: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLAS 734
LGSLEPS P + DLTLYLVVA A VSCVFLAFV+VLLA RLRRWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
Query: 735 MPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAP 794
+P SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK L
Sbjct: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
Query: 795 QSLLEDKKE-PFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 853
E K+ P QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
Sbjct: 795 VDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
Query: 854 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 913
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
Sbjct: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
Query: 914 APAGGNGNKKKSGKKEKK 931
APAGGNGNKKKSGKKEKK
Sbjct: 915 APAGGNGNKKKSGKKEKK 932
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1348 bits (3488), Expect = 0.0
Identities = 678/922 (73%), Positives = 775/922 (84%), Gaps = 3/922 (0%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L+LLC+ L L A I YSVPEET+KGSFVGNI+KDLGL+P+ELA GVRIVSRG+
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LFA+NPRSGSLITA RIDREELC C ++ +LVED +K++ VEVEIIDINDN P
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
FQ +E+E K++E PG R +LP +D DVG+NSLQSYQLS N +FSL ++ DG ++P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDRE+EA H L+LTA DGG+P+R G + I + V+D ND+ P FTQ+ Y ++VP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
EN+ GT++LMVNATDPDEG NGEV YSF N++ + ++IF+LDS TGE+ + LDFE+Y
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
+ Y ME+Q QDG GL +LI V+DVNDNAPE+TITS ++ EN PPGT+IAL++V
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
DQDSG+NG +CFIP +LPFKLEK NYY+L+T R LDREL+ YNIT+TA DQG+P L
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
S ETH+ L V D NDN PVF SYSAYIPENNPRGASIFSV A D DS +NA +TYSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
+DT+QG PLS+Y+SINS+TGVLYAL+SFDYEQFRD++L+V+ARDSGDPPLSSNVSLSLF+
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDL+LYLVVA AAVSC+FL FVIVLLA RL RWHKSRLLQAS GGL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKG--F 790
A MP SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQESCEK
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 791 LSAPQSLLEDKKEPFS-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 849
++ +++ K +P S QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 794 IAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 853
Query: 850 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 909
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 854 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 913
Query: 910 RDGKAPAGGNGNKKKSGKKEKK 931
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 RDGKAPAGGNGNKKKSGKKEKK 935
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1345 bits (3481), Expect = 0.0
Identities = 690/920 (75%), Positives = 758/920 (82%), Gaps = 1/920 (0%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L+LLC L L E G G I YSVPEETDKGSFVGNI+KDLGL P++LA GVRIVSRGR
Sbjct: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LFALNPRSGSLITA RIDREELCAQS CL++ N LVEDK KLF VE+EIIDINDN P+
Sbjct: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
FQ+E+LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSLDVQ G +G +P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDREEEA HHL+LTASDGG+P RS T+RI++ V+D NDN P F Y + V
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
EN+P GT+LL V A+DPDEG NG+V Y F ++ + +F+L+ TGEIS + LD+EE
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Y ME+QA+D L+ + K+LI V DVNDN PEV ITS+ + V EN PGT+IA +SVH
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
DQDSG NG C+ NLPFKLEK + NYYRLVT + LDRE +S YNIT+ A D GTP L
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
STET I+L V DINDN P F SYSAYI ENN RGASIFS+ AHD DS ENAQ+TYS+
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
EDT+QGAPLS+Y+SINSDTGVLYAL+SFDYEQ RD+QL V A DSGDPPLSSN+SLSLF+
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
+LGSL+PS PNDS LTLYLVVA AA+SCVFLAFV VLL RLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
+P SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK L
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
Query: 793 APQSLLEDKKE-PFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
E K E QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 TSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 912 GKAPAGGNGNKKKSGKKEKK 931
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1305 bits (3376), Expect = 0.0
Identities = 669/921 (72%), Positives = 747/921 (81%), Gaps = 1/921 (0%)
Query: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
RL+LLC L +L EA A I YSVPEET+KG VGNI+KDL L+P+ELA+ VRIVSRGR
Sbjct: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
Query: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
LF+LNPRSG+L+TA RIDREELCAQS CLV+F +LVED++KL+ +E+E+ DIND+ P
Sbjct: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
Query: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
+FQ E LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSL+VQ G +G +
Sbjct: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
Query: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
PE+VL+ LDREE HHL+LTASDGGEP RS T+RI++ V+D NDN P F Q Y + V
Sbjct: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
Query: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
ENVP GT LL A+D DEG NG+V Y F ++ + + +F+L+ TGEIS + LD+EE
Sbjct: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
Query: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Y ME+QA+DG GL KVLI V DVNDN PEVTITS+ + V E+ P GT+I L +
Sbjct: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Query: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
HD+DSG NG C I NL F LE ++YYRL+T + LDRE S YNIT+TA D+GTP
Sbjct: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
Query: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
LSTE HI+L VTDINDN P F Q SYS Y+PENN RG SIFSV A+D DSNEN+++ YSL
Sbjct: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
Query: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
EDTIQG+PLS Y+SINSDTGVLYAL SFDYEQFRD+Q++V A DSG PPLSSNVSL LF
Sbjct: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
Query: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRL KA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD I DI
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
LADLGSL+ A SDLTLYLVVA A VSCVFL FVI LLA RLR WH S LL+A+ G
Sbjct: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
Query: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791
LA +P SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK L
Sbjct: 732 LAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPL 791
Query: 792 S-APQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 850
+ S + P QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 792 CVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 851
Query: 851 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 910
ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 852 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 911
Query: 911 DGKAPAGGNGNKKKSGKKEKK 931
DGKAPAGGNGNKKKSGKKEKK
Sbjct: 912 DGKAPAGGNGNKKKSGKKEKK 932
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1163 bits (3008), Expect = 0.0
Identities = 588/808 (72%), Positives = 673/808 (83%), Gaps = 1/808 (0%)
Query: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
M +KL C +L+LLC L L EA AG I YSV EE D+GSFVGNIAKDLGL+P LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
+ GVRIVSRGR LFALNPRSGSL+TA RIDREELCAQS PCL++FNIL+EDK+ ++ VE
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
VEI DINDN P+F +EELE K++E TTPG R+ L D DVG N+LQ Y L+ N HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
DV++GADG ++PE+VL+ LDREEEAVHHL+L ASDGG+PV SGT RI ++V+DANDN P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
FTQ +Y I++PEN +GT++L V ATD DEG +V Y +++F L S +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
++ + LD+E+ + ++++AQDG GL+ + KV++ VLDVNDNAPE +TS T++V E+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
PGTII L +VHD+DSG N +TTC +P +LPFKLEK VDNYYRLVT R LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
T+TA D G P+LST+ HI L V DINDN+P F + SYS YIPENNPRGAS+FSV AHD D
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
SN+NA +TYS EDT+QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+Q+ V+ARDSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLSLF+LDQNDNAPEILYPA PTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
TVAVADRI DILADLGSLEPSA PNDSDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGG L M SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKKGFLSAPQSLL-EDKKEPFSQ 807
SQESCEKK FLSAPQSLL E+++E FSQ
Sbjct: 781 SQESCEKKDFLSAPQSLLEEEREETFSQ 808
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1132 bits (2927), Expect = 0.0
Identities = 578/789 (73%), Positives = 658/789 (83%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L LLC L L E G+G I YSV EE DKGSFVGNIA DLGL+P+ELA+ GVRIVSRGR
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LF+LNP+SGSL+TA RIDREELCAQ CLV NILVEDK+K+F VE+EI DINDN P
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
F EELE K+ E+T PGTR + D DVG+NSLQ+Y+LS N +FSL V ++G ++P
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDRE++ +H L+L ASDGG+PV SG L I + V+DANDNPP FTQ +Y ++V
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
ENVP+GT+LL VNATDPDEG N +V+Y + ++A+IF L+S +GE+S + LD+E+
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Y ++++AQDG GL+++ K+L+ VLDVNDNAPE+TITS+T++VPE G IALI VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
D+DSG NG F+ GNLPFKLEK +D YYRLVT +LDRE IS YNI++ A D G+P L
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
STETHI+L V DINDN P F SYSAYIPENNPRGASIFSV A D DSN NA+ITY+L
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
EDT+QGAPLS+++SINS+TGVLYALRSFDYEQFRD++L V A DSG+PPLSSNVSL+LF+
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI DIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
ADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
AS PGSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK L
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 APQSLLEDK 801
Q LLE K
Sbjct: 793 ITQDLLEMK 801
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1131 bits (2926), Expect = 0.0
Identities = 573/795 (72%), Positives = 658/795 (82%)
Query: 9 GCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVS 68
GC L+L + L L E G+G I YS+PEE DKGSFVGNIAKDLGL+PQELA+ GVRIVS
Sbjct: 9 GCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVS 68
Query: 69 RGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDIND 128
RGR LFALNPRSGSL+TA RIDREELCAQS C+V+FNILVE+KMK++ VEVEIIDIND
Sbjct: 69 RGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDIND 128
Query: 129 NTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADG 188
N P+F+ EEL+ K+NE GTR+ LPF +D DVG+NSL+SYQLSSN HFSLDV G DG
Sbjct: 129 NFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDG 188
Query: 189 PQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYH 248
++PE+VL+ PLDRE+E VH L+LTA DGG+PV SGT I + V+DANDN P FT ++Y
Sbjct: 189 QKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYS 248
Query: 249 INVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLD 308
++VPEN+P+GT+LLM+ ATDPDEG NG++TYSF N + ++++ F+LDS GEIS + LD
Sbjct: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLD 308
Query: 309 FEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIAL 368
+EE + Y MEV AQDG L+A KV++ V DVNDNAPEV +TS+T+++ E+ PGT+IAL
Sbjct: 309 YEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIAL 368
Query: 369 ISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQG 428
SVHD DSG+NG C IP NLPFKLEK VDNYY L+T R LDRE S YNIT+T +D G
Sbjct: 369 FSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHG 428
Query: 429 TPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQIT 488
TP LSTE+HI L V D+NDN P F Q SYS + ENNPRG SIFSV AHD DS +NA++T
Sbjct: 429 TPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVT 488
Query: 489 YSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSL 548
YSL EDT QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+QL V A DSG+PPLSSNVSL
Sbjct: 489 YSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSL 548
Query: 549 SLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
SLF+LDQNDN PEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRL
Sbjct: 549 SLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 608
Query: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668
LKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRI
Sbjct: 609 LKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRI 668
Query: 669 SDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728
DILADLGS++ P D DLTLYLVVA AAVSCVFLAFVIVLL RLRRWHKSRLLQA
Sbjct: 669 PDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAE 728
Query: 729 GGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKK 788
G LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK
Sbjct: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKS 788
Query: 789 GFLSAPQSLLEDKKE 803
L + +K+E
Sbjct: 789 EPLLMSDKVDANKEE 803
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1125 bits (2910), Expect = 0.0
Identities = 584/807 (72%), Positives = 655/807 (81%), Gaps = 3/807 (0%)
Query: 11 SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70
S +LL L L A A I YS+PEE +KGSFVGNI KDLGL+PQELA+ GVRIVSRG
Sbjct: 11 SEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRG 70
Query: 71 RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130
RM LF+LNPR+GSL+TA RIDREELCAQS CLVSFNILVEDK+ L+PVEVEI+DINDNT
Sbjct: 71 RMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNT 130
Query: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190
P+F EELE K+ E P +R L D DVGMNSLQ ++LS N HFS+DVQ A GP+
Sbjct: 131 PRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPK 190
Query: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250
+PE+VL+ LDRE EAV+ L+LTA DGG+PVRS +I + V+D NDN P FTQ Y ++
Sbjct: 191 YPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVS 250
Query: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310
VPEN+P+GT +L V ATD DEG +GEVTYSF + +++QIF L+ TGEIS LD+E
Sbjct: 251 VPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYE 310
Query: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370
+ Y + V+A+DG GL + KVLI +LDVNDN PEV +TS + + E+ PPGT+IAL
Sbjct: 311 DSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQ 370
Query: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430
V D+DSG NG TC IP +LPF+LEK V NYYRLVT LDRE + YNIT+TA D+GTP
Sbjct: 371 VFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTP 430
Query: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490
LSTET ISL V D NDN P F SYS Y+ ENNPRGASIFSV A D D ++NAQ++YS
Sbjct: 431 PLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYS 490
Query: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550
L EDT+QGAPLS+Y+SINSDTG+LYALRSFDYEQ RD+QL V A DSGDPPLSSNVSLSL
Sbjct: 491 LAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSL 550
Query: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
F+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670
ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI D
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
ILADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RL+RWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGG 730
Query: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790
GLASMPGSHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EK
Sbjct: 731 GLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEP 790
Query: 791 LSAPQSLLEDKKEPFSQQA---PPNTD 814
L Q LLE K EP Q PP +
Sbjct: 791 LLITQDLLETKGEPRQLQVSFFPPKRE 817
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1123 bits (2905), Expect = 0.0
Identities = 579/800 (72%), Positives = 649/800 (81%), Gaps = 4/800 (0%)
Query: 5 KKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGV 64
K+ CS L+LLCL + EAGA I YS+PEE +KGSFVGNI+KDLGL P+ELA+ GV
Sbjct: 9 KESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGV 68
Query: 65 RIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEII 124
RIVSRGR LF+LNPRSGSLITA RIDREELCAQS C+VSFNILVED++KLF +E+E+
Sbjct: 69 RIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVT 128
Query: 125 DINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQ 184
DINDN P+FQ E L+ K+NE G R LP D DVG+NSLQSYQLS N HFSL VQ
Sbjct: 129 DINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQS 188
Query: 185 GADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQ 244
A+G ++PE+VL+ LDREEEA+HHL+LTASDGG+P+RSGT+ + + V DANDN P FT
Sbjct: 189 RANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTL 248
Query: 245 AQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNK 304
+Y ++VPEN+P+GTQLL V ATD DEGANGEVTYSF + F+L+ YTGEI
Sbjct: 249 PEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKIS 308
Query: 305 EPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGT 364
E LD+EE Y +E+QA+DG +A KVLI V DVNDN+PE+TITS+ + V E+ P GT
Sbjct: 309 ENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGT 368
Query: 365 IIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITA 424
++AL++VHD DS NG TC I LPFKLEK +D+YYRLV R LDRE +S YNIT+TA
Sbjct: 369 VVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTA 428
Query: 425 IDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNEN 484
D G+P LSTE H L V DINDN P F Q SY YIPENN RGASIFSV A D DS EN
Sbjct: 429 TDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKEN 488
Query: 485 AQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSS 544
AQI YSL EDTIQG PLS+Y+SINSDTGVLYALRSFDYEQF ++Q++V A DSGDPPLSS
Sbjct: 489 AQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSS 548
Query: 545 NVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWL 604
NVSLSLF+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWL
Sbjct: 549 NVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWL 608
Query: 605 SYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 664
SYRLLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV
Sbjct: 609 SYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAV 668
Query: 665 ADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRL 724
AD I +LADLGS E A SDLTLYLVVA AAVSCVFLAFVIVLLAHRLRRWHKSRL
Sbjct: 669 ADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRL 728
Query: 725 LQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 784
LQASGGGL + GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES
Sbjct: 729 LQASGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES 788
Query: 785 CEKKGFLSAPQSLLEDKKEP 804
CEK + P SLL+D K P
Sbjct: 789 CEK----NDPLSLLDDSKFP 804
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1103 bits (2852), Expect = 0.0
Identities = 566/775 (73%), Positives = 636/775 (82%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L+LL + L L E G I YSVPEE +KGS VG+I++DLGL+P+ELA+ GVRI+ RGR
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LFALNPRSGSL+TA RIDREELC ++ C ++ +IL+EDK+K++ VEVE+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
F+ ELE K++E R LP D D+G NSLQSY+LS N HFSL VQ GADG ++P
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDREE+A HHL+LTASDGG+PVR+GT RI + V+DANDN PAF Q +Y +VP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
EN+ LGTQLL+VNATDPDEG N EV YSF VD + AQ+F+LD +G IS LD EE
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Y MEVQA D AG A+ KVLI VLDVNDNAPEV +TS+ ++VPEN P GT+IAL++V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
DQDS +NG CFI GNLPFKLEK NYY LVT+ LDRE + YNIT+TA D+GTP L
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
STETHISL V D NDN PVF Q SYSAYIPENNPRG S+ SV AHD D ENAQITYSL
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
E+TIQGA LS+Y+SINSDTGVLYAL SFDYEQFRD+Q+KVMARD+G PPLSSNVSLSLF+
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDLTLYLVVA AAVSCVFLAFVI+LLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
P SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1102 bits (2851), Expect = 0.0
Identities = 565/794 (71%), Positives = 648/794 (81%)
Query: 11 SRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRG 70
+RL+ +CL L +L+E A I YSV EE ++GS VGNIAKDLGL P+ELA+ GVRIVSRG
Sbjct: 11 TRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRG 70
Query: 71 RMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNT 130
R LFALNPRSG+L+TA RIDREELC +S C+ + IL+ED +K+ VEVEIID+NDN
Sbjct: 71 RTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNP 130
Query: 131 PQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQ 190
P F E+ E K+ E PG R LP D DVG+NSLQ YQL+SN +FSLDVQ GADG +
Sbjct: 131 PSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIK 190
Query: 191 HPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHIN 250
+PE+VL+ LDREEEAVHHL+LTA DGG+PVRSGT RI I +VD NDN P FTQ +YH++
Sbjct: 191 YPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVS 250
Query: 251 VPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFE 310
V ENVP+GT+LL V ATDPDEGANG+VTYSF V +++Q+F+L+S +G+I+ LD+E
Sbjct: 251 VRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYE 310
Query: 311 EYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALIS 370
+ Y ++V+A DG GL A+ KVL+ VLD NDNAPEVT+TS+T++V E+ PGT+IAL +
Sbjct: 311 DSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFN 370
Query: 371 VHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTP 430
VHD DSG NG TC IP NLPF LEK NYYRL+T RTLDRE +S YNIT+TA DQGTP
Sbjct: 371 VHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTP 430
Query: 431 ALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYS 490
LSTETHISL V DINDN P F SYSAYIPENNPRGASI S+ A D DS +NA+ITYS
Sbjct: 431 PLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYS 490
Query: 491 LIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSL 550
L EDT QGAPLS+Y+SINS+TG+LYAL SFDYEQFRD+QL + A DSGDPPLSSNVSLSL
Sbjct: 491 LAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSL 550
Query: 551 FLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
F+LDQNDN PEILYP PTDGSTGVELAP SA+ GYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISD 670
+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVAD I D
Sbjct: 611 SSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
+LADLGSL+PSA P+DS LTLYLVVA AAVSCVFLAFV VLLA +LRRWHKSRLL A G
Sbjct: 671 VLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGS 730
Query: 731 GLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGF 790
LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEK
Sbjct: 731 RLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEP 790
Query: 791 LSAPQSLLEDKKEP 804
L Q LLE K +P
Sbjct: 791 LLITQDLLETKGDP 804
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1100 bits (2844), Expect = 0.0
Identities = 557/807 (69%), Positives = 654/807 (81%), Gaps = 7/807 (0%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L+LLC+ L L A I YSVPEET+KGSFVGNI+KDLGL+P+ELA GVRIVSRG+
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LFA+NPRSGSLITA RIDREELC C ++ +LVED +K++ VEVEIIDINDN P
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
FQ +E+E K++E PG R +LP +D DVG+NSLQSYQLS N +FSL ++ DG ++P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDRE+EA H L+LTA DGG+P+R G + I + V+D ND+ P FTQ+ Y ++VP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
EN+ GT++LMVNATDPDEG NGEV YSF N++ + ++IF+LDS TGE+ + LDFE+Y
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
+ Y ME+Q QDG GL +LI V+DVNDNAPE+TITS ++ EN PPGT+IAL++V
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
DQDSG+NG +CFIP +LPFKLEK NYY+L+T R LDREL+ YNIT+TA DQG+P L
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
S ETH+ L V D NDN PVF SYSAYIPENNPRGASIFSV A D DS +NA +TYSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
+DT+QG PLS+Y+SINS+TGVLYAL+SFDYEQFRD++L+V+ARDSGDPPLSSNVSLSLF+
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
ADLGSLE A SDL+LYLVVA AAVSC+FL FVIVLLA RL RWHKSRLLQAS GGL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKG--F 790
A MP SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQESCEK
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 791 LSAPQSLLEDKKEPFSQQA-----PPN 812
++ +++ K +P S Q PPN
Sbjct: 794 IAEDSAIILGKCDPTSNQVRFISLPPN 820
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1099 bits (2842), Expect = 0.0
Identities = 568/797 (71%), Positives = 643/797 (80%)
Query: 15 LLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPL 74
LL + L EA AG I YSV EETDKGSFVG+IAKDLGL+P+ELA+ GVRI+SRGR L
Sbjct: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
Query: 75 FALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQ 134
FALN RSGSL+TA RIDREE+CAQS CLV+FNIL+EDKM L+P++VEIIDINDN P+F
Sbjct: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
Query: 135 LEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEM 194
EE+ K+ E T PG R L D DVG NSLQSYQLS N HFSL VQ G D ++PE+
Sbjct: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
Query: 195 VLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPEN 254
VL+ LDREEE VHHL+LTASDGG+P RS T I + VVD ND+ P F+ QY + VPEN
Sbjct: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
Query: 255 VPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKM 314
VP+GT+LL V+A D DEG NGEVTYSF + ++ ++F L+S TGEIS E LD+EE
Sbjct: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
Query: 315 YSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQ 374
Y MEVQAQDG G + K KVLI VLDVNDNAPEVT+TS+++++PE+ P GT+IAL + D+
Sbjct: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Query: 375 DSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALST 434
DSG NG TC IP NLPFKLEK +DNYYRLVT + LDRE +S YNIT+ A D GTP LS
Sbjct: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
Query: 435 ETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIED 494
ETHI + V D NDN P F SYS YI ENNPRGASIF V A D DS +NAQITYSL ED
Sbjct: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
Query: 495 TIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLD 554
TIQGAP+S+Y+SINSDTGVLYAL+SFDYEQ R++QL+V A DSGDPPLSSN+SLSLF+LD
Sbjct: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAP SAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++LAD
Sbjct: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLAS 734
LGSLEPS P + DLTLYLVVA A VSCVFLAFV+VLLA RLRRWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
Query: 735 MPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAP 794
+P SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK L
Sbjct: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
Query: 795 QSLLEDKKEPFSQQAPP 811
E K+ S Q P
Sbjct: 795 VDFQECKENLPSIQVSP 811
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1094 bits (2830), Expect = 0.0
Identities = 565/791 (71%), Positives = 633/791 (80%)
Query: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
L+LLC L L E G G I YSVPEETDKGSFVGNI+KDLGL P++LA GVRIVSRGR
Sbjct: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
Query: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
LFALNPRSGSLITA RIDREELCAQS CL++ N LVEDK KLF VE+EIIDINDN P+
Sbjct: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
Query: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
FQ+E+LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSLDVQ G +G +P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
Query: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
E+VL+ LDREEEA HHL+LTASDGG+P RS T+RI++ V+D NDN P F Y + V
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
Query: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
EN+P GT+LL V A+DPDEG NG+V Y F ++ + +F+L+ TGEIS + LD+EE
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
Query: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Y ME+QA+D L+ + K+LI V DVNDN PEV ITS+ + V EN PGT+IA +SVH
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Query: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
DQDSG NG C+ NLPFKLEK + NYYRLVT + LDRE +S YNIT+ A D GTP L
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
Query: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
STET I+L V DINDN P F SYSAYI ENN RGASIFS+ AHD DS ENAQ+TYS+
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
Query: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
EDT+QGAPLS+Y+SINSDTGVLYAL+SFDYEQ RD+QL V A DSGDPPLSSN+SLSLF+
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
+LGSL+PS PNDS LTLYLVVA AA+SCVFLAFV VLL RLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
Query: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
+P SHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK L
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
Query: 793 APQSLLEDKKE 803
E K E
Sbjct: 793 TSVDFHEYKNE 803
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1056 bits (2732), Expect = 0.0
Identities = 546/793 (68%), Positives = 624/793 (78%), Gaps = 4/793 (0%)
Query: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
RL+LLC L +L EA A I YSVPEET+KG VGNI+KDL L+P+ELA+ VRIVSRGR
Sbjct: 12 RLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGR 71
Query: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
LF+LNPRSG+L+TA RIDREELCAQS CLV+F +LVED++KL+ +E+E+ DIND+ P
Sbjct: 72 TQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAP 131
Query: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
+FQ E LE K+NEI PG R LP D DVG+NSLQSYQLS N HFSL+VQ G +G +
Sbjct: 132 KFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAIN 191
Query: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
PE+VL+ LDREE HHL+LTASDGGEP RS T+RI++ V+D NDN P F Q Y + V
Sbjct: 192 PELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKV 251
Query: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
ENVP GT LL A+D DEG NG+V Y F ++ + + +F+L+ TGEIS + LD+EE
Sbjct: 252 LENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEE 311
Query: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Y ME+QA+DG GL KVLI V DVNDN PEVTITS+ + V E+ P GT+I L +
Sbjct: 312 CSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNA 371
Query: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
HD+DSG NG C I NL F LE ++YYRL+T + LDRE S YNIT+TA D+GTP
Sbjct: 372 HDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPP 431
Query: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
LSTE HI+L VTDINDN P F Q SYS Y+PENN RG SIFSV A+D DSNEN+++ YSL
Sbjct: 432 LSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSL 491
Query: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
EDTIQG+PLS Y+SINSDTGVLYAL SFDYEQFRD+Q++V A DSG PPLSSNVSL LF
Sbjct: 492 AEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLF 551
Query: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
+LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRL KA
Sbjct: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD I DI
Sbjct: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDI 671
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
LADLGSL+ A SDLTLYLVVA A VSCVFL FVI LLA RLR WH S LL+A+ G
Sbjct: 672 LADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDG 731
Query: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791
LA +P SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK
Sbjct: 732 LAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEK---- 787
Query: 792 SAPQSLLEDKKEP 804
+ P + D K P
Sbjct: 788 NEPLCVSVDSKFP 800
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 931 bits (2407), Expect = 0.0
Identities = 497/921 (53%), Positives = 626/921 (67%), Gaps = 16/921 (1%)
Query: 14 MLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMP 73
+L L L A I Y +PEE KGS VGN+A DLG QEL +R+ S P
Sbjct: 16 VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KP 73
Query: 74 LFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQF 133
F ++ SG L+ + R+DREE+C + C + F + E+ + + V VEI DIND+TP+F
Sbjct: 74 YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133
Query: 134 QLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPE 193
E +++E PGTR L +D D+G+NSLQ Y+LS NP FSL +++ DG ++PE
Sbjct: 134 TQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPE 193
Query: 194 MVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPE 253
+ L+ LDRE+++ H L+LTA DGG P SGT + IQV DANDNPP F + Y +++ E
Sbjct: 194 LALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRE 253
Query: 254 NVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYK 313
NVP GT +L V+ATD DEG N E+TYSF+ R QIF L+S +GEI+ ++ LDFEE K
Sbjct: 254 NVPPGTTVLQVSATDQDEGINSEITYSFY----RTGQIFSLNSKSGEITTQKKLDFEETK 309
Query: 314 MYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHD 373
YSM V+ +DG GL+A+ V I + D NDN+PEVT S+ + EN PGT+IALI +HD
Sbjct: 310 EYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHD 369
Query: 374 QDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALS 433
QDSG+NG C + G +PFK+ N Y+LVT+ TLDRE YN+TITA D+G P LS
Sbjct: 370 QDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLS 429
Query: 434 TETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIE 493
+ + L + D+NDN+PVFHQ SY +PENNP GASI V A DLD N Q++YS++
Sbjct: 430 SSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMA 489
Query: 494 DTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLL 553
++ L++Y+S+++ +GV++A R+FDYEQ R +L + ARD G P LS+NVSL + +
Sbjct: 490 SDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
D+NDNAP +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILA 673
PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 669
Query: 674 DLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLA 733
D+ P ++L YLVVA A +S +FL VI+ +A RLRR GL
Sbjct: 670 DITD-RPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLC 728
Query: 734 SMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESC---EKKGF 790
G V YS+ + + A + K+ F + ++ L S + + G
Sbjct: 729 VKSGP--VVPPNYSQGTLPYSYNLCV-AHTGKTEFNFLK--CSEQLSSGQDILCGDSSGA 783
Query: 791 LSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 850
L + E P QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 784 LFPLCNSSESTSHP-ELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 842
Query: 851 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 910
ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 843 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 902
Query: 911 DGKAPAGGNGNKKKSGKKEKK 931
DGKAPAGGNGNKKKSGKKEKK
Sbjct: 903 DGKAPAGGNGNKKKSGKKEKK 923
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 922 bits (2384), Expect = 0.0
Identities = 492/941 (52%), Positives = 633/941 (67%), Gaps = 20/941 (2%)
Query: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGA--GNIHYSVPEETDKGSFVGNIAKDLGLQPQE 58
MK G R + + L L L GA I YS+PEE K S VGN+AKDLGL ++
Sbjct: 1 MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRD 60
Query: 59 LADGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFP 118
L +R+ + F +NP SG L+ + RIDRE++C + C++ F+ + E+ + +F
Sbjct: 61 LPARKLRVSAEKEY--FTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFY 118
Query: 119 VEVEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHF 178
+ V + DINDNTP F+ ++ K+ E T PGT L D DVG NSLQ Y L+ N +F
Sbjct: 119 IAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYF 178
Query: 179 SLDVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDN 238
L +Q DG ++PE++L+ LDREE ++H L+LTA DGG+P +SGT +I I+V DANDN
Sbjct: 179 DLAEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDN 238
Query: 239 PPAFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYT 298
PP F+Q Y + + E+VP G +L V ATD DEG N E+TYSFHNVD +V F L+ T
Sbjct: 239 PPVFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKT 298
Query: 299 GEISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPE 358
GEI+ K+ LDFE Y++ ++A+D L A + +++LD ND APEV +TSV+T +PE
Sbjct: 299 GEITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPE 358
Query: 359 NFPPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGY 418
+ PPGT+IALI D+DSG+NG C + GN F L+ NYY+LVT+ LDRE I Y
Sbjct: 359 DSPPGTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEY 418
Query: 419 NITITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHD 478
N+TITA D G P LS+ ++L ++D+NDN+PVF Q SY ++ ENNP GASI + A D
Sbjct: 419 NLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASD 478
Query: 479 LDSNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSG 538
D + Q++YS++ ++ + +Y+S+++ +GV++A R+FD+EQ R +L + ARD G
Sbjct: 479 PDLGPSGQVSYSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQG 538
Query: 539 DPPLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDS 598
P LS+NVSL + + D NDNAP +LYPAL DGS ++ P +AEPGYLVTKVVAVD DS
Sbjct: 539 SPALSANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADS 598
Query: 599 GQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATV 658
G NAWLSY +L+ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT
Sbjct: 599 GHNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATA 658
Query: 659 TLTVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRR 718
TL + AD + ++L DL + P + L YLVVA A +S +F VI+ ++ RLR
Sbjct: 659 TLHLIFADSLQEVLPDLSDRREPSDP-QAKLQFYLVVALALISVLFFLAVILAISLRLRL 717
Query: 719 WHKSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF----PQPN 774
+S GL+S PG + YS+ + + + S K+ F P+
Sbjct: 718 SSRSDAWDCFQPGLSSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELV 775
Query: 775 YADTLI----SQESCEKKGFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQN 830
A L+ S E G P + + +QAPPNTDWRFSQAQRPGTSGSQN
Sbjct: 776 PAQDLVCDNASWEQNTNHGAAGVPFA-----SDTILKQAPPNTDWRFSQAQRPGTSGSQN 830
Query: 831 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 890
GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY
Sbjct: 831 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 890
Query: 891 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 891 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 912 bits (2358), Expect = 0.0
Identities = 495/933 (53%), Positives = 627/933 (67%), Gaps = 30/933 (3%)
Query: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
R ML L LL + + I Y++PEE D+GS VGN+AKDLG +L +R+++ +
Sbjct: 14 RRMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKK 73
Query: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
F ++P +G+L+ + RIDREE+C + C++ F ++ E + F V V I DINDN P
Sbjct: 74 F--FTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPP 131
Query: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
F E +++E+ G +L QD DVG+NSLQ Y LS +PHFSL ++ DG ++
Sbjct: 132 TFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRY 191
Query: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
PE+VL++PLDREE+ HHL+LTA DGGEP RS T +I + V DANDNPP FTQ Y +NV
Sbjct: 192 PELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNV 251
Query: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
EN+P G+ +L V A D DEG N E+ Y+F N+ V Q+F+LDS TGE++ LDFEE
Sbjct: 252 AENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEE 311
Query: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
Y++ V+A+DG A KV I + D NDNAPE+T+ S + + E+ GT +ALI
Sbjct: 312 RDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKT 371
Query: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
HD DSG NG C + GN PFK+ + N YRLVT+ LDRE I YN+TITA D+G P
Sbjct: 372 HDLDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPP 431
Query: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
LS+ I+L + D+NDN PVFHQ SY+ ++ ENNP GASI VRA D D N ++Y +
Sbjct: 432 LSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYI 491
Query: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
+ ++ LS+Y+S+++ +GV++A R+FD+EQ R +L + ARD G P LS+NVSL +
Sbjct: 492 VASDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVL 551
Query: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
+ D+NDNAP +LYPAL +GS ++ P SAEPGYLVTKVVAVD DSG NAWLSY +++A
Sbjct: 552 VDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
SEPGLFS+GL TGEVRTAR L DR+A +Q L+V V+D GQ PLSATV L + AD + +I
Sbjct: 612 SEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEI 671
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
DL S P+ ++L +LVVA A +S +FL VI+ ++ RLR + A+ G
Sbjct: 672 QPDL-SDRPTPSDPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSR----PATEGY 726
Query: 732 LASMPGSHFVGVDGVRAFLQTYS-----HEVSLTADSRKSHLIFPQPNYADTLISQESCE 786
PG F V GV L TYS + + A S S+ F N I E+
Sbjct: 727 F--QPGVCFKTVPGV---LPTYSERTLPYSYNPCAASHSSNTEFKFLN-----IKAENAA 776
Query: 787 KKGFLSAPQSLLEDKKEP--------FSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 838
+ L S E P +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP
Sbjct: 777 PQDLLCDEASWFESNDNPEMPSNSGNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWP 836
Query: 839 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 898
NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG
Sbjct: 837 NNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPG 896
Query: 899 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 897 SNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 911 bits (2354), Expect = 0.0
Identities = 476/926 (51%), Positives = 628/926 (67%), Gaps = 16/926 (1%)
Query: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
R +L L L L I YS+PEE KGS VGN+AKDLGL +++ +R+ +
Sbjct: 14 RQVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKL 73
Query: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
F+++ +SG L+ RIDRE++C + C + +VE+ + +F V V I D+ND+ P
Sbjct: 74 H--FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAP 131
Query: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
QF+ +E+ +++E + G L +D D+ MNSL YQLS N +FSL + DG ++
Sbjct: 132 QFRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKY 191
Query: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
PE+VLQ LDRE ++ HHL+LTA DGG+P RSGT +I I V+DANDNPP F+Q Y +++
Sbjct: 192 PELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSL 251
Query: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
E+VP GT +L V ATD DEG N E+TYSF V + +F LD TG I ++PLDFEE
Sbjct: 252 REDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEE 311
Query: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
+ Y++ ++A+D L + KV+++V+D NDN+PE+ ITS++ + E+ PPG ++AL
Sbjct: 312 VERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKT 371
Query: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
DQDSG+NG C + +PFK+ +NYY+LVT+ LDRE YN+TI A D+G P
Sbjct: 372 RDQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPP 431
Query: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
LS+ I+L +TD+NDN+PVF Q +Y ++PENN GASI V A D D N +++YSL
Sbjct: 432 LSSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSL 491
Query: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
I ++ LS+Y+S+++ +GV++A R+FD+EQ R +L + ARD G P LS+NVSL +
Sbjct: 492 IASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVL 551
Query: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
+ D+NDNAP +LYPAL DGS + P +A+PGYLVTKVVAVD DSG NAWLSY +++A
Sbjct: 552 VGDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
SEPGLFS+GL TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT TL + AD + ++
Sbjct: 612 SEPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 671
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
L D S P+ + +++ YLVVA A +S +FL VI+ +A RLR+
Sbjct: 672 LPDF-SDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESV 730
Query: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL----ISQESCEK 787
L S G VG Y++ + D P+ N+ ++ +Q++ K
Sbjct: 731 LCSKSGP--VGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNLNK 783
Query: 788 KGFLSAP--QSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 845
L A +E K+ QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE
Sbjct: 784 DSMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 843
Query: 846 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 905
MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN
Sbjct: 844 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 903
Query: 906 AAGKRDGKAPAGGNGNKKKSGKKEKK 931
AAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 904 AAGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 903 bits (2333), Expect = 0.0
Identities = 483/928 (52%), Positives = 617/928 (66%), Gaps = 19/928 (2%)
Query: 12 RLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGR 71
R +L L L L + I YS+PEE KGS VGN+AKDLGL +++ +R+ +
Sbjct: 14 RQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKL 73
Query: 72 MPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTP 131
F+++ SG L+ RIDRE++C + C + +VE+ + +F V V I D+ND+ P
Sbjct: 74 H--FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAP 131
Query: 132 QFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQH 191
QF +E+ ++ E + GTR+SL D D+ +NS++ Y+++SNP+FSL V+ +DG ++
Sbjct: 132 QFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKY 191
Query: 192 PEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINV 251
PE+ L+ LDREE+ H LILTA DGG+P RS T I I V D NDNPP F++ +Y I++
Sbjct: 192 PELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISL 251
Query: 252 PENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEE 311
EN+P G+ +L V ATD DEG N E+ Y F + +F LD TG I N + DFE+
Sbjct: 252 SENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFED 311
Query: 312 YKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISV 371
+ Y+MEV+A+DG GL + KV+I++LD NDN+PE+ ITS++ + EN PPG ++AL
Sbjct: 312 VERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKT 371
Query: 372 HDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPA 431
D D G NG C I ++PFK+ +NYY+LVT+ LDRE YN+TI A D+G P
Sbjct: 372 RDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPP 431
Query: 432 LSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSL 491
LS+ I+L V DINDN+PVF Q SY ++ ENNP GASI V A D D N I+YS+
Sbjct: 432 LSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSI 491
Query: 492 IEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLF 551
+ ++ +S+Y+S+++ +GV++A R+FD+EQ R L + ARD G P LS+NVSL +
Sbjct: 492 VASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVL 551
Query: 552 LLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
+ D+NDNAP +LYPAL DGS ++ P SAEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 552 VGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 611
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDI 671
SEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + +I
Sbjct: 612 SEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEI 671
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 731
L DL S P ++L YLVVA A +S +FL VI+ +A RLRR G
Sbjct: 672 LPDL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPG 730
Query: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFL 791
L G V YS+ + + K N+ + S E
Sbjct: 731 LCVKSGP--VVPPNYSEGTLPYSYNLCIAHTGTKEF------NFLKCSVPLHSNEDMVCS 782
Query: 792 SAPQSL--------LEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 843
+P +L L E + QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD
Sbjct: 783 VSPGALIPPHGGEDLTSHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD 842
Query: 844 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 903
TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL
Sbjct: 843 TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATL 902
Query: 904 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
TNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 903 TNAAGKRDGKAPAGGNGNKKKSGKKEKK 930
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 896 bits (2315), Expect = 0.0
Identities = 485/927 (52%), Positives = 620/927 (66%), Gaps = 34/927 (3%)
Query: 20 LELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNP 79
L L A + I Y++PEE GS VG +AKDLGL +EL +R+ + F ++
Sbjct: 20 LSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED---YFNVSL 76
Query: 80 RSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELE 139
SG L+ RIDRE++C + + C + F + E+ M +F V V I DINDN P+F + ++
Sbjct: 77 ESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVAKGID 136
Query: 140 FKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSP 199
++ E PG + SL QD DV NSL+ Y ++ N +FSL ++ DG ++P ++L+ P
Sbjct: 137 LEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLLLEKP 196
Query: 200 LDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGT 259
LDRE ++ H LILTA DGG+P SGT I+I+V DANDN P F+Q Y +++ ENVP GT
Sbjct: 197 LDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENVPWGT 256
Query: 260 QLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSMEV 319
+L V ATD DEG N E+TY+F N + +F L+ TG+I+ LDFEE Y + V
Sbjct: 257 SVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSRYVLSV 315
Query: 320 QAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDN 379
+A+DG A V I+++D NDNAPEVT S + +PE+ GT+IALI V D+DSG N
Sbjct: 316 EAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDSGQN 375
Query: 380 GYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETHIS 439
G TC+ +PFKLE NYY+LV L+RE + YN+TI A D+G PALS+ T I+
Sbjct: 376 GMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRTSIT 435
Query: 440 LLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGA 499
L ++DINDN+PVFHQ SY ++ ENNP GASI V A D D N +++YS++ ++
Sbjct: 436 LHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLEPR 495
Query: 500 PLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNA 559
L +Y+S++ +GV++A R+FD+EQ R +L + ARD G P LS+NVSL + + D NDNA
Sbjct: 496 ELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNA 555
Query: 560 PEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSV 619
P +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+
Sbjct: 556 PRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSL 615
Query: 620 GLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLE 679
GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L DL S
Sbjct: 616 GLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDL-SDR 674
Query: 680 PSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRR--------WHKSRLLQASGGG 731
P ++L YLVVA A +S +FL VI+ +A RLRR ++ L SG G
Sbjct: 675 PEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSGPG 734
Query: 732 LASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQES--CEKKG 789
+P +H G YS+ + + + S K+ F N + + C+
Sbjct: 735 ---VPPNHSEGT-------LPYSYNLCIASHSAKTE--FNSLNLTPEMAPPQDLLCDDPS 782
Query: 790 FLSAPQSLLEDKKEPF-----SQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT 844
+ + ED K + S QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT
Sbjct: 783 MVVCASN--EDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDT 840
Query: 845 EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT 904
EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT
Sbjct: 841 EMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLT 900
Query: 905 NAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NAAGKRDGKAPAGGNGNKKKSGKKEKK 927
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,141,599
Number of Sequences: 37866
Number of extensions: 1681691
Number of successful extensions: 10159
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3179
Number of HSP's gapped (non-prelim): 725
length of query: 931
length of database: 18,247,518
effective HSP length: 112
effective length of query: 819
effective length of database: 14,006,526
effective search space: 11471344794
effective search space used: 11471344794
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.