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Search of human proteins with 11056024
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11056024 protocadherin gamma subfamily A, 5 isoform 1
precursor [Homo sapiens]
(931 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1841 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1587 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1394 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1387 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1386 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1385 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1383 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1378 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1378 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1377 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1368 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1353 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1342 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1140 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1134 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1133 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1131 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1130 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1128 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1127 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1126 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1115 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1110 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1093 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 940 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 929 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 925 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 920 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 917 0.0
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs... 917 0.0
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1841 bits (4769), Expect = 0.0
Identities = 931/931 (100%), Positives = 931/931 (100%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1587 bits (4109), Expect = 0.0
Identities = 807/807 (100%), Positives = 807/807 (100%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQ 807
SEESCEKSEPLLMSDKVDANKEERRVQ
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEERRVQ 807
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1394 bits (3609), Expect = 0.0
Identities = 714/931 (76%), Positives = 786/931 (84%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+PP LL +LLG L E + QI YS+ EE ++GS VGNIAKDLGL P+ELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ERGVRIVSRGRTQLFALNPRSG+LVTAGRIDREELC +SP CV N IL+E+ +KI VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEIID+NDN P F E+ ++KV EN G R LP A D DVGVNSL+ YQL+SN +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DV SG DG KYPELVLE+ LDRE+E VH L+LTA DGGDPV SGT I + ++D NDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+FT EY VSV EN+PVGTRLL + ATDPDEG NG +TYSFR +KIS+ FQL+S G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
I+ L LDYE+S FY ++V A DG L A +KV+VTV D NDNAPEV +TSLTSS+ E
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
PGTVIALF+VHD DSG NG + CSIP NLPF LEK+ NYY LLT R LDREE S+YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+T D GTPPLSTE+HI L+V D+NDNPP FP ASYS + ENNPRG SI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
SGDNAR+TYSLAEDTFQGAPLSSYVSINS+TG+LYAL SFDYEQ RDLQL +TASDSG+P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSY LLK+SEPGLFAVGLHTGEVRTARALLDRDALKQ LVV V+DHGQPPLSAT T+
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVAD IPD+LADLGS+K DP+D LTLYLVVAVAAVSCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLL AEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTL+
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
S ESCEKSEPLL++ + K + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1387 bits (3591), Expect = 0.0
Identities = 714/932 (76%), Positives = 788/932 (84%), Gaps = 1/932 (0%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA P R E +L LLGTL + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEI+DINDN PRF EEL+VK+ ENAA +R L D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DV S G KYPELVLE LDRE E V+ L+LTA+DGGDPV S I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+FT Y VSVPEN+PVGT +L +TATD DEG++G++TYSF EKIS+ F L+ GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
IST +LDYE+S FY + V A+DG L AKV++T+ DVNDN PEV++TS + +I+E
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T LDREE YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+T D GTPPLSTE+ I L VAD NDNPP FP +SYS V ENNPRG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVADRIPDILADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQA G LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
++ES EKSEPLL++ D ++ E R++QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1386 bits (3587), Expect = 0.0
Identities = 702/920 (76%), Positives = 784/920 (85%), Gaps = 1/920 (0%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
L L LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
QLF+LNP+SGSLVTA RIDREELCAQ PLC+V NILVE+K+KI+ VE+EI DINDN P
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
F EEL++K+ E GTR + A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVLE+ LDREK+ +H L+L A DGGDPV SG HI+V VLDANDN P+FT EY VSV
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
EN+PVGTRLL + ATDPDEG N +++Y KI+E F L+S GE+S L+SLDYE++
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
FY +++ AQDG L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+ G IAL VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DSG+NG++ + NLPFKLEKS+D YY L+T LDRE+ S+YNI+L D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
STE+HI L V D+NDNPP FP SYS + ENNPRG SIFSVTA DPDS +NAR+TY+L
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
ADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
A P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 MS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
++ D ++ + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 912 GKAPAGGNGNKKKSGKKEKK 931
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1385 bits (3584), Expect = 0.0
Identities = 698/923 (75%), Positives = 783/923 (84%)
Query: 9 GCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVS 68
GC L+L + L L E G+G I YS+PEE DKGSFVGNIAKDLGL+PQELA+ GVRIVS
Sbjct: 9 GCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVS 68
Query: 69 RGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDIND 128
RGR LFALNPRSGSL+TA RIDREELCAQS C+V+FNILVE+KMK++ VEVEIIDIND
Sbjct: 69 RGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDIND 128
Query: 129 NFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDG 188
N P+F+ EEL+ K+NE GTR+ LPF +D DVG+NSL+SYQLSSN HFSLDV G DG
Sbjct: 129 NTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADG 188
Query: 189 QKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYS 248
++PE+VL+ PLDRE+E VH L+LTA DGG+PV SGT I + V+DANDN P FT ++Y
Sbjct: 189 PQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYH 248
Query: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLD 308
++VPEN+P+GT+LLM+ ATDPDEG NG++TYSF N + ++++ F+LDS GEIS + LD
Sbjct: 249 INVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLD 308
Query: 309 YEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIAL 368
+EE + Y MEV AQDG L+A KV++ V DVNDNAPEV +TS+T+++ E+ PGT+IAL
Sbjct: 309 FEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIAL 368
Query: 369 FSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHG 428
SVHD DSG+NG C IP NLPFKLEK VDNYY L+T R LDRE S YNIT+T +D G
Sbjct: 369 ISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQG 428
Query: 429 TPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVT 488
TP LSTE+HI L V D+NDN P F Q SYS + ENNPRG SIFSV AHD DS +NA++T
Sbjct: 429 TPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQIT 488
Query: 489 YSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSL 548
YSL EDT QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+QL V A DSG+PPLSSNVSL
Sbjct: 489 YSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSL 548
Query: 549 SLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 608
SLF+LDQNDN PEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRL
Sbjct: 549 SLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 609 LKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRI 668
LKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668
Query: 669 PDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAE 728
DILADLGS++ P D DLTLYLVVA AAVSCVFLAFVIVLL RLRRWHKSRLLQA
Sbjct: 669 SDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728
Query: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKS 788
G LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK
Sbjct: 729 GGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKK 788
Query: 789 EPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
L + +K+E QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 789 GFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1383 bits (3580), Expect = 0.0
Identities = 701/923 (75%), Positives = 780/923 (84%), Gaps = 1/923 (0%)
Query: 10 CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
C +L+L LL TL E +GQIRYS+ EE+D+GSFVGNIAKDLGLEP LAE+GVRIVSR
Sbjct: 10 CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
Query: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
GR+QLFALNPRSGSLVTA RIDREELCAQS C++NFNIL+E+K+ IY VEVEI DINDN
Sbjct: 70 GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
PRF EEL++K++E G R+ L A DADVG N+L+ Y L+ N HFSLDV G DG
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
KYPELVLE+ LDRE+E VH L+L A DGGDPVLSGT+ I V VLDANDNAP+FT EY +
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
S+PEN VGTR+L +TATD DEG ++ Y + SE F+L S GE++ ++ LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
E++ F+ +++ AQDG L+ AKV+VTV DVNDNAPE +TS TSS+SED LPGT+I LF
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
+VHD DSG+N CS+P +LPFKLEKSVDNYY L+TTR LDRE+ S YNITLT D G
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
P LST++HI L+VAD+NDN P F + SYST + ENNPRG S+FSVTAHDPDS DNA VTY
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
S AEDT QGAPLSSY+SINSDTGVLYALRSFDYEQLRDLQ+WV A DSGNPPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
LFVLDQNDN PEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVA++DHGQPPLSAT T+TVAVADRIP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
DILADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK +
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
Query: 790 PLLMSDK-VDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
L ++ +EE QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 790 FLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 849
Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 850 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 909
Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 910 KRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1378 bits (3567), Expect = 0.0
Identities = 705/932 (75%), Positives = 787/932 (84%), Gaps = 1/932 (0%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+ PRG L +LLGT E +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS C+VNFNIL+E+KM +Y ++
Sbjct: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEIIDINDN PRF EE+ VK+ EN A G R L A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
V SG D KYPELVLE+ LDRE+E VH L+LTA DGGDP S T HI+VTV+D ND+ P
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+F+ +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR K+ + F L+S GE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
ISTL+ LDYEE+ FY MEV AQDG + AKV++TV DVNDNAPEV +TSL+SSI ED
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE S YNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
TL D GTPPLS E+HI ++VAD NDNPP FP +SYS + ENNPRG SIF VTA D D
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVAD IP++LADLGS++ P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQA LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
S+ESCEK++ LL S D + + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1378 bits (3566), Expect = 0.0
Identities = 698/923 (75%), Positives = 786/923 (85%), Gaps = 1/923 (0%)
Query: 10 CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
C L+L + G E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 14 CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
Query: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
GRTQLF+LNPRSGSL+TAGRIDREELCAQS CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 74 GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
P+F+ E L VK+NEN AAG R LP A D DVGVNSL+SYQLS N HFSL V S +G
Sbjct: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
KYPELVLE LDRE+E +H L+LTA DGGDP+ SGT + VTV DANDNAP+FT EY V
Sbjct: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
SVPEN+PVGT+LL +TATD DEG NG++TYSFR + FQL+ GEI ++LDY
Sbjct: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED GTV+AL
Sbjct: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
+VHD DS +NG++ CSI LPFKLEKS+D+YY L+ R LDRE+ S YNIT+T D G+
Sbjct: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
PPLSTE+H L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
+LADLGS ++P + E DLTLYLVVAVAAVSCVFLAFVIVLL RLRRWHKSRLLQA G
Sbjct: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
L GV SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
Query: 790 PL-LMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
PL L+ D ++ V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 794 PLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 853
Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 854 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 913
Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 KRDGKAPAGGNGNKKKSGKKEKK 936
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1377 bits (3563), Expect = 0.0
Identities = 703/932 (75%), Positives = 784/932 (84%), Gaps = 1/932 (0%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+P GEL+L LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
+ GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
+EIIDINDN P+F+ E+L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DV +G +G PELVLE+ LDRE+E H L+LTA DGG P S T I VTVLD NDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+F Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR EK + FQL+ N GE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
IS +SLDYEE FY ME+ A+D GAL+ K++++V+DVNDN PEVI+TSL S + E+
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
LPGTVIA SVHD DSG+NG++ C NLPFKLEKS+ NYY L+T + LDRE S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+ D GTPPLSTE+ I L VAD+NDNPP FP ASYS + ENN RG SIFS+TAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVAD IP++L +LGS+K +DP D LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQ G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
S+E CEK++ LL S D + E QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1368 bits (3541), Expect = 0.0
Identities = 695/920 (75%), Positives = 781/920 (84%), Gaps = 1/920 (0%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
L+L +LLGTL E G QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
QLFALNPRSGSLVTAGRIDREELC + C +N +IL+E+K+KIYGVEVE+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
FR+ EL++K++ENAA R LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVL++ LDRE++ H L+LTA DGGDPV +GT IRV VLDANDNAP F EY SVP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
EN+ +GT+LL++ ATDPDEG+N ++ YSFR ++K ++ F+LD N G IST+ LD+EES
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
FY MEV A D A AKV++TV DVNDNAPEV+LTSL SS+ E+ GT+IAL +V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DS ENG++ C I NLPFKLEKS NYY L+T LDRE+ YNIT+T D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
STE+HI L VAD NDNPP FPQASYS + ENNPRGVS+ SVTAHDPD +NA++TYSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
ADLGS+++P + E DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 793 MS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
+S D V + ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 912 GKAPAGGNGNKKKSGKKEKK 931
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1353 bits (3503), Expect = 0.0
Identities = 691/922 (74%), Positives = 773/922 (83%), Gaps = 3/922 (0%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
LLL + LGTL + QIRYS+PEE +KGSFVGNI+KDLGLEP+ELA+RGVRIVSRG+T
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
QLFA+NPRSGSL+TAGRIDREELC C +N +LVE+ +KIYGVEVEIIDINDN P
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
F+++E+++KV+E+A G R LP ARD DVGVNSL+SYQLS N +FSL + TDG K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVLE LDREKE H LLLTALDGGDP+ G IRV VLD ND+ P+FT S Y VSVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
ENI GTR+LM+ ATDPDEGING++ YSFRN E K SE FQLDS GE+ SLD+E+
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
RFY ME+ QDGG L + +++TV DVNDNAPE+ +TS +SI E+ PGTVIAL +V
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DSGENG+++C IP +LPFKLEK+ NYY L+T+R LDRE YNITLT D G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
S E+H+ L VAD NDNPP FP +SYS + ENNPRG SIFSVTA DPDS NA VTYSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
+DT QG PLSSYVSINS+TGVLYAL+SFDYEQ RDL+L V A DSG+PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
ADLGS+++ + E DL+LYLVVAVAAVSC+FL FVIVLL LRL RWHKSRLLQA L
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
AG+P SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL+S+ESCEKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 793 MSDK---VDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 849
+++ + + QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 794 IAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 853
Query: 850 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 909
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 854 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 913
Query: 910 RDGKAPAGGNGNKKKSGKKEKK 931
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 RDGKAPAGGNGNKKKSGKKEKK 935
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1342 bits (3473), Expect = 0.0
Identities = 688/932 (73%), Positives = 769/932 (82%), Gaps = 1/932 (0%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+P + G L+L LLG L E + QIRYS+PEE +KG VGNI+KDL LEP+ELA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
+E+ DIND+ P+F+ E L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
+V +G +G PELVLE+ LDRE+ T H L+LTA DGG+P S T I VTVLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+F Y V V EN+P GT LL TA+D DEGINGK+ Y F EK S FQL+ N GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
IST +SLDYEE FY ME+ A+DGG L KV+++V+DVNDN PEV +TSL S + ED
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
GTVI LF+ HD DSG+NG++ CSI NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+T D GTPPLSTE HI L+V D+NDNPP F QASYS + ENN RG SIFSV A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVA+AD IPDILADLGS++ P D E DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
S LL+A LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
S++SCEK+EPL +S D ++ V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1140 bits (2949), Expect = 0.0
Identities = 590/807 (73%), Positives = 662/807 (82%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+PP LL +LLG L E + QI YS+ EE ++GS VGNIAKDLGL P+ELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ERGVRIVSRGRTQLFALNPRSG+LVTAGRIDREELC +SP CV N IL+E+ +KI VE
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEIID+NDN P F E+ ++KV EN G R LP A D DVGVNSL+ YQL+SN +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DV SG DG KYPELVLE+ LDRE+E VH L+LTA DGGDPV SGT I + ++D NDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+FT EY VSV EN+PVGTRLL + ATDPDEG NG +TYSFR +KIS+ FQL+S G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
I+ L LDYE+S FY ++V A DG L A +KV+VTV D NDNAPEV +TSLTSS+ E
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
PGTVIALF+VHD DSG NG + CSIP NLPF LEK+ NYY LLT R LDREE S+YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+T D GTPPLSTE+HI L+V D+NDNPP FP ASYS + ENNPRG SI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
SGDNAR+TYSLAEDTFQGAPLSSYVSINS+TG+LYAL SFDYEQ RDLQL +TASDSG+P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSY LLK+SEPGLFAVGLHTGEVRTARALLDRDALKQ LVV V+DHGQPPLSAT T+
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVAD IPD+LADLGS+K DP+D LTLYLVVAVAAVSCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLL AEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTL+
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQ 807
S ESCEKSEPLL++ + K + +Q
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDPNLQ 807
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1134 bits (2932), Expect = 0.0
Identities = 592/817 (72%), Positives = 668/817 (81%), Gaps = 3/817 (0%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA P R E +L LLGTL + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1 MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61 EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEI+DINDN PRF EEL+VK+ ENAA +R L D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DV S G KYPELVLE LDRE E V+ L+LTA+DGGDPV S I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+FT Y VSVPEN+PVGT +L +TATD DEG++G++TYSF EKIS+ F L+ GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
IST +LDYE+S FY + V A+DG L AKV++T+ DVNDN PEV++TS + +I+E
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T LDREE YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+T D GTPPLSTE+ I L VAD NDNPP FP +SYS V ENNPRG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVADRIPDILADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQA G LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQA--PPNTD 814
++ES EKSEPLL++ D ++ E R++Q + PP +
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKRE 817
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1133 bits (2930), Expect = 0.0
Identities = 578/796 (72%), Positives = 659/796 (82%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
L L LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
QLF+LNP+SGSLVTA RIDREELCAQ PLC+V NILVE+K+KI+ VE+EI DINDN P
Sbjct: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
F EEL++K+ E GTR + A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVLE+ LDREK+ +H L+L A DGGDPV SG HI+V VLDANDN P+FT EY VSV
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
EN+PVGTRLL + ATDPDEG N +++Y KI+E F L+S GE+S L+SLDYE++
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
FY +++ AQDG L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+ G IAL VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DSG+NG++ + NLPFKLEKS+D YY L+T LDRE+ S+YNI+L D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
STE+HI L V D+NDNPP FP SYS + ENNPRG SIFSVTA DPDS +NAR+TY+L
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
ADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
A P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
Query: 793 MSDKVDANKEERRVQQ 808
++ + K + + Q
Sbjct: 793 ITQDLLEMKGDSNLLQ 808
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1131 bits (2926), Expect = 0.0
Identities = 573/795 (72%), Positives = 658/795 (82%)
Query: 9 GCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVS 68
GC L+L + L L E G+G I YS+PEE DKGSFVGNIAKDLGL+PQELA+ GVRIVS
Sbjct: 9 GCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVS 68
Query: 69 RGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDIND 128
RGR LFALNPRSGSL+TA RIDREELCAQS C+V+FNILVE+KMK++ VEVEIIDIND
Sbjct: 69 RGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDIND 128
Query: 129 NFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDG 188
N P+F+ EEL+ K+NE GTR+ LPF +D DVG+NSL+SYQLSSN HFSLDV G DG
Sbjct: 129 NTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADG 188
Query: 189 QKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYS 248
++PE+VL+ PLDRE+E VH L+LTA DGG+PV SGT I + V+DANDN P FT ++Y
Sbjct: 189 PQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYH 248
Query: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLD 308
++VPEN+P+GT+LLM+ ATDPDEG NG++TYSF N + ++++ F+LDS GEIS + LD
Sbjct: 249 INVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLD 308
Query: 309 YEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIAL 368
+EE + Y MEV AQDG L+A KV++ V DVNDNAPEV +TS+T+++ E+ PGT+IAL
Sbjct: 309 FEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIAL 368
Query: 369 FSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHG 428
SVHD DSG+NG C IP NLPFKLEK VDNYY L+T R LDRE S YNIT+T +D G
Sbjct: 369 ISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQG 428
Query: 429 TPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVT 488
TP LSTE+HI L V D+NDN P F Q SYS + ENNPRG SIFSV AHD DS +NA++T
Sbjct: 429 TPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQIT 488
Query: 489 YSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSL 548
YSL EDT QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+QL V A DSG+PPLSSNVSL
Sbjct: 489 YSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSL 548
Query: 549 SLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 608
SLF+LDQNDN PEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRL
Sbjct: 549 SLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 609 LKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRI 668
LKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668
Query: 669 PDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAE 728
DILADLGS++ P D DLTLYLVVA AAVSCVFLAFVIVLL RLRRWHKSRLLQA
Sbjct: 669 SDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728
Query: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKS 788
G LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK
Sbjct: 729 GGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKK 788
Query: 789 EPLLMSDKVDANKEE 803
L + +K+E
Sbjct: 789 GFLSAPQSLLEDKKE 803
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1130 bits (2924), Expect = 0.0
Identities = 576/799 (72%), Positives = 654/799 (81%)
Query: 10 CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
C +L+L LL TL E +GQIRYS+ EE+D+GSFVGNIAKDLGLEP LAE+GVRIVSR
Sbjct: 10 CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69
Query: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
GR+QLFALNPRSGSLVTA RIDREELCAQS C++NFNIL+E+K+ IY VEVEI DINDN
Sbjct: 70 GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129
Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
PRF EEL++K++E G R+ L A DADVG N+L+ Y L+ N HFSLDV G DG
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189
Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
KYPELVLE+ LDRE+E VH L+L A DGGDPVLSGT+ I V VLDANDNAP+FT EY +
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249
Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
S+PEN VGTR+L +TATD DEG ++ Y + SE F+L S GE++ ++ LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309
Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
E++ F+ +++ AQDG L+ AKV+VTV DVNDNAPE +TS TSS+SED LPGT+I LF
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369
Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
+VHD DSG+N CS+P +LPFKLEKSVDNYY L+TTR LDRE+ S YNITLT D G
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429
Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
P LST++HI L+VAD+NDN P F + SYST + ENNPRG S+FSVTAHDPDS DNA VTY
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489
Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
S AEDT QGAPLSSY+SINSDTGVLYALRSFDYEQLRDLQ+WV A DSGNPPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549
Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
LFVLDQNDN PEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609
Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVA++DHGQPPLSAT T+TVAVADRIP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669
Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
DILADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729
Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK +
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789
Query: 790 PLLMSDKVDANKEERRVQQ 808
L + + E Q
Sbjct: 790 FLSAPQSLLEEEREETFSQ 808
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1128 bits (2918), Expect = 0.0
Identities = 572/786 (72%), Positives = 658/786 (83%)
Query: 10 CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
C L+L + G E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 14 CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73
Query: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
GRTQLF+LNPRSGSL+TAGRIDREELCAQS CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 74 GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133
Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
P+F+ E L VK+NEN AAG R LP A D DVGVNSL+SYQLS N HFSL V S +G
Sbjct: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193
Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
KYPELVLE LDRE+E +H L+LTA DGGDP+ SGT + VTV DANDNAP+FT EY V
Sbjct: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253
Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
SVPEN+PVGT+LL +TATD DEG NG++TYSFR + FQL+ GEI ++LDY
Sbjct: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313
Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED GTV+AL
Sbjct: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373
Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
+VHD DS +NG++ CSI LPFKLEKS+D+YY L+ R LDRE+ S YNIT+T D G+
Sbjct: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433
Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
PPLSTE+H L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493
Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553
Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613
Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673
Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
+LADLGS ++P + E DLTLYLVVAVAAVSCVFLAFVIVLL RLRRWHKSRLLQA G
Sbjct: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733
Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
L GV SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793
Query: 790 PLLMSD 795
PL + D
Sbjct: 794 PLSLLD 799
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1127 bits (2916), Expect = 0.0
Identities = 583/811 (71%), Positives = 662/811 (81%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+ PRG L +LLGT E +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS C+VNFNIL+E+KM +Y ++
Sbjct: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
VEIIDINDN PRF EE+ VK+ EN A G R L A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
V SG D KYPELVLE+ LDRE+E VH L+LTA DGGDP S T HI+VTV+D ND+ P
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+F+ +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR K+ + F L+S GE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
ISTL+ LDYEE+ FY MEV AQDG + AKV++TV DVNDNAPEV +TSL+SSI ED
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE S YNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
TL D GTPPLS E+HI ++VAD NDNPP FP +SYS + ENNPRG SIF VTA D D
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVAD IP++LADLGS++ P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQA LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPP 811
S+ESCEK++ LL S KE Q P
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSP 811
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1126 bits (2912), Expect = 0.0
Identities = 578/803 (71%), Positives = 658/803 (81%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+P GEL+L LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1 MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
+ GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61 KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
+EIIDINDN P+F+ E+L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
DV +G +G PELVLE+ LDRE+E H L+LTA DGG P S T I VTVLD NDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+F Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR EK + FQL+ N GE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
IS +SLDYEE FY ME+ A+D GAL+ K++++V+DVNDN PEVI+TSL S + E+
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
LPGTVIA SVHD DSG+NG++ C NLPFKLEKS+ NYY L+T + LDRE S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+ D GTPPLSTE+ I L VAD+NDNPP FP ASYS + ENN RG SIFS+TAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVAVAD IP++L +LGS+K +DP D LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
KSRLLQ G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780
Query: 781 SEESCEKSEPLLMSDKVDANKEE 803
S+E CEK++ LL S K E
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNE 803
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1115 bits (2885), Expect = 0.0
Identities = 569/782 (72%), Positives = 652/782 (83%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
L+L +LLGTL E G QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13 LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
QLFALNPRSGSLVTAGRIDREELC + C +N +IL+E+K+KIYGVEVE+ DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
FR+ EL++K++ENAA R LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVL++ LDRE++ H L+LTA DGGDPV +GT IRV VLDANDNAP F EY SVP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
EN+ +GT+LL++ ATDPDEG+N ++ YSFR ++K ++ F+LD N G IST+ LD+EES
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
FY MEV A D A AKV++TV DVNDNAPEV+LTSL SS+ E+ GT+IAL +V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DS ENG++ C I NLPFKLEKS NYY L+T LDRE+ YNIT+T D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
STE+HI L VAD NDNPP FPQASYS + ENNPRGVS+ SVTAHDPD +NA++TYSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
ADLGS+++P + E DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
Query: 793 MS 794
+S
Sbjct: 793 LS 794
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1110 bits (2871), Expect = 0.0
Identities = 572/807 (70%), Positives = 653/807 (80%), Gaps = 7/807 (0%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
LLL + LGTL + QIRYS+PEE +KGSFVGNI+KDLGLEP+ELA+RGVRIVSRG+T
Sbjct: 14 LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
QLFA+NPRSGSL+TAGRIDREELC C +N +LVE+ +KIYGVEVEIIDINDN P
Sbjct: 74 QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
F+++E+++KV+E+A G R LP ARD DVGVNSL+SYQLS N +FSL + TDG K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVLE LDREKE H LLLTALDGGDP+ G IRV VLD ND+ P+FT S Y VSVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
ENI GTR+LM+ ATDPDEGING++ YSFRN E K SE FQLDS GE+ SLD+E+
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
RFY ME+ QDGG L + +++TV DVNDNAPE+ +TS +SI E+ PGTVIAL +V
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DSGENG+++C IP +LPFKLEK+ NYY L+T+R LDRE YNITLT D G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
S E+H+ L VAD NDNPP FP +SYS + ENNPRG SIFSVTA DPDS NA VTYSL
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
+DT QG PLSSYVSINS+TGVLYAL+SFDYEQ RDL+L V A DSG+PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
ADLGS+++ + E DL+LYLVVAVAAVSC+FL FVIVLL LRL RWHKSRLLQA L
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
AG+P SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL+S+ESCEKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793
Query: 793 MSD-------KVDANKEERRVQQAPPN 812
+++ K D + R PPN
Sbjct: 794 IAEDSAIILGKCDPTSNQVRFISLPPN 820
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1093 bits (2827), Expect = 0.0
Identities = 562/794 (70%), Positives = 641/794 (80%)
Query: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
MA+P + G L+L LLG L E + QIRYS+PEE +KG VGNI+KDL LEP+ELA
Sbjct: 1 MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60
Query: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61 ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120
Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
+E+ DIND+ P+F+ E L+VK+NE A G R LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180
Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
+V +G +G PELVLE+ LDRE+ T H L+LTA DGG+P S T I VTVLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240
Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
+F Y V V EN+P GT LL TA+D DEGINGK+ Y F EK S FQL+ N GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300
Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
IST +SLDYEE FY ME+ A+DGG L KV+++V+DVNDN PEV +TSL S + ED
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360
Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
GTVI LF+ HD DSG+NG++ CSI NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420
Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
T+T D GTPPLSTE HI L+V D+NDNPP F QASYS + ENN RG SIFSV A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480
Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540
Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
TVA+AD IPDILADLGS++ P D E DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720
Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
S LL+A LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SEESCEKSEPLLMS 794
S++SCEK+EPL +S
Sbjct: 781 SQQSCEKNEPLCVS 794
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 940 bits (2429), Expect = 0.0
Identities = 508/941 (53%), Positives = 635/941 (67%), Gaps = 35/941 (3%)
Query: 7 GWGCGEL-------LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQEL 59
G G GEL +L LL C QIRY +PEE+ KGS VGN+A DLG QEL
Sbjct: 2 GSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQEL 61
Query: 60 AERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGV 119
R +R+ S F ++ SG L+ + R+DREE+C + P C + F + EN + Y V
Sbjct: 62 PTRKLRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHV 119
Query: 120 EVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFS 179
VEI DIND+ P+F +++++E+A GTR +L A DAD+G+NSL+ Y+LS N FS
Sbjct: 120 NVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFS 179
Query: 180 LDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNA 239
L + DG KYPEL LE+ LDRE+++ H L+LTALDGG P LSGTT +R+ V DANDN
Sbjct: 180 LIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNP 239
Query: 240 PLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLG 299
P+F Y VS+ EN+P GT +L ++ATD DEGIN ++TYSF + + F L+S G
Sbjct: 240 PVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFY----RTGQIFSLNSKSG 295
Query: 300 EISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISED 359
EI+T + LD+EE++ Y M V +DGG LVA V + +QD NDN+PEV SL I E+
Sbjct: 296 EITTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILEN 355
Query: 360 CLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYN 419
+PGT+IAL +HD DSGENGE+ C + +PFK+ S N Y L+T LDRE+T +YN
Sbjct: 356 AVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYN 415
Query: 420 ITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDP 479
+T+T D G PPLS+ + L + DVNDN P F QASY SV ENNP G SI V A D
Sbjct: 416 VTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDL 475
Query: 480 DSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGN 539
D G N +V+YS+ + L+SYVS+++ +GV++A R+FDYEQLR +L + A D G+
Sbjct: 476 DLGLNGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGS 535
Query: 540 PPLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 599
P LS+NVSL + V D+NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG
Sbjct: 536 PALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSG 595
Query: 600 QNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFT 659
NAWLSY +L+ASEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T
Sbjct: 596 HNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATAT 655
Query: 660 VTVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRW 719
+ + AD + ++L D+ P DP+ +L YLVVA+A +S +FL VI+ + LRLRR
Sbjct: 656 LHLVFADSLQEVLPDITDRPVPSDPQ-AELQFYLVVALALISVLFLLAVILAVALRLRRS 714
Query: 720 HKSRLLQAEGSRLAG-----VPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF---- 770
L VP ++ G YS+ + + A + K+ F
Sbjct: 715 SSPAAWSCFQPGLCVKSGPVVPPNYSQGT-------LPYSYNLCV-AHTGKTEFNFLKCS 766
Query: 771 PQPNYADTLLSEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQN 830
Q + +L +S PL S + ++ E QAPPNTDWRFSQAQRPGTSGSQN
Sbjct: 767 EQLSSGQDILCGDSSGALFPLCNSSESTSHPE----LQAPPNTDWRFSQAQRPGTSGSQN 822
Query: 831 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 890
GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY
Sbjct: 823 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 882
Query: 891 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 883 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 929 bits (2402), Expect = 0.0
Identities = 493/925 (53%), Positives = 633/925 (68%), Gaps = 21/925 (2%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
LLLP + TLCEP IRYS+PEEL KGS VGN+AKDLGL +++ R +R+ +
Sbjct: 20 LLLP-LFYPTLCEP----IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKLH 74
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
F+++ +SG L+ RIDRE++C + C + +VEN + I+ V V I D+ND+ P+
Sbjct: 75 --FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQ 132
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
FR +E+ ++++E+ + G +L A D D+ +NSL YQLS N +FSL DG KYP
Sbjct: 133 FRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYP 192
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
ELVL++ LDRE ++ H L+LTALDGGDP SGT IR+ V+DANDN P+F+ Y VS+
Sbjct: 193 ELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLR 252
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
E++P GT +L + ATD DEGIN ++TYSF +K F LD G I T Q LD+EE
Sbjct: 253 EDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEV 312
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
Y + + A+D G+L KV+V V D NDN+PE+I+TSL+ I ED PG V+ALF
Sbjct: 313 ERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTR 372
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D DSGENGE+ CS+ R +PFK+ S +NYY L+T LDRE+T +YN+T+ D G PPL
Sbjct: 373 DQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPL 432
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
S+ I L + DVNDN P F Q++Y V ENN G SI V+A DPD G N RV+YSL
Sbjct: 433 SSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLI 492
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
+ LSSYVS+++ +GV++A R+FD+EQLR +L + A D G+P LS+NVSL + V
Sbjct: 493 ASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLV 552
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
D+NDN P +LYPAL DGS + PR+A+PGYLVTKVVAVD DSG NAWLSY +++AS
Sbjct: 553 GDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQAS 612
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLF++GL TGEVR RAL D+D+++Q L+VAV D GQPPLSAT T+ + AD + ++L
Sbjct: 613 EPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVL 672
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
D TP D + ++ YLVVA+A +S +FL VI+ + LRLR+ S L
Sbjct: 673 PDFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVL 731
Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL----LSEESCEKS 788
S VG Y++ + D P+ N+ ++ ++++ K
Sbjct: 732 CS--KSGPVGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNLNKD 784
Query: 789 EPLLMSDKVDANKEERRV--QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 846
LL S + + ++++ QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 785 SMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 844
Query: 847 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 906
LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 845 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 904
Query: 907 AGKRDGKAPAGGNGNKKKSGKKEKK 931
AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 905 AGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 925 bits (2391), Expect = 0.0
Identities = 503/936 (53%), Positives = 632/936 (67%), Gaps = 37/936 (3%)
Query: 12 ELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGR 71
++L PF LL C S QIRY++PEEL GS VG +AKDLGL +EL R +R+ +
Sbjct: 13 QVLFPF-LLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE-- 69
Query: 72 TQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFP 131
F ++ SG L+ GRIDRE++C + C + F + EN M ++ V V I DINDN P
Sbjct: 70 -DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAP 128
Query: 132 RFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY 191
RF + + +++ E+A G + L A+DADV NSL+ Y ++ N +FSL DG KY
Sbjct: 129 RFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKY 188
Query: 192 PELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSV 251
P L+LE+PLDRE ++ H L+LTA+DGGDP LSGTTHI + V DANDNAP+F+ Y VS+
Sbjct: 189 PVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSL 248
Query: 252 PENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEE 311
EN+P GT +L + ATD DEGIN ++TY+F N S F L+ N G+I+T +LD+EE
Sbjct: 249 QENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEE 307
Query: 312 SRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSV 371
+ Y++ V A+DGG A V + + D NDNAPEV S ++ I ED GTVIAL V
Sbjct: 308 TSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKV 367
Query: 372 HDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP 431
D DSG+NG + C +PFKLE + NYY L+ L+RE+T+DYN+T+ D G P
Sbjct: 368 RDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPA 427
Query: 432 LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSL 491
LS+ + I L ++D+NDN P F QASY V+ENNP G SI V+A DPD G N RV+YS+
Sbjct: 428 LSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSI 487
Query: 492 AEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLF 551
+ L SYVS++ +GV++A R+FD+EQLR +L + A D G+P LS+NVSL +
Sbjct: 488 LASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 547
Query: 552 VLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKA 611
V D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 548 VGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 607
Query: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDI 671
SEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ + AD + ++
Sbjct: 608 SEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEV 667
Query: 672 LADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG-- 729
L DL P DP+ +L YLVVA+A +S +FL VI+ + LRLRR S L EG
Sbjct: 668 LPDLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCF 723
Query: 730 ------SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEE 783
GVP +H G YS+ + + + S K+ F N + +
Sbjct: 724 QTGLCSKSGPGVPPNHSEGT-------LPYSYNLCIASHSAKTE--FNSLNLTPEMAPPQ 774
Query: 784 SCEKSEPLLMSDKVDANKEERRV--------QQAPPNTDWRFSQAQRPGTSGSQNGDDTG 835
+P ++ V A+ E+ ++ QAPPNTDWRFSQAQRPGTSGSQNGDDTG
Sbjct: 775 DLLCDDPSMV---VCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTG 831
Query: 836 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 895
TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
Sbjct: 832 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 891
Query: 896 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 892 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 927
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 920 bits (2378), Expect = 0.0
Identities = 490/926 (52%), Positives = 633/926 (68%), Gaps = 15/926 (1%)
Query: 12 ELLLPFMLLGTLCEPGS--GQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
++LLPF+L PG+ QIRYS+PEEL K S VGN+AKDLGL ++L R +R+ +
Sbjct: 15 QVLLPFLLS---LFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE 71
Query: 70 GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
+ F +NP SG L+ + RIDRE++C + PLCV++F+ + EN + I+ + V + DINDN
Sbjct: 72 --KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDN 129
Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
P F+ ++ +K+ E+ GT L A D+DVG NSL+ Y L+ N +F L DG+
Sbjct: 130 TPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGR 189
Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
KYPEL+L+ LDRE+ ++H L+LTA+DGGDP SGTT IR+ V DANDN P+F+ Y V
Sbjct: 190 KYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRV 249
Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
++ E++P G +L +TATD DEGIN ++TYSF N +E++ F L+ GEI+T LD+
Sbjct: 250 TLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDF 309
Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
E + Y + + A+D G L A + V + D ND APEVI+TS+++ + ED PGTVIAL
Sbjct: 310 EIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALI 369
Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
D DSGENGE+ C + N F L+ S NYY L+T LDREE +YN+T+T D G
Sbjct: 370 KTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGK 429
Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
PPLS+ + L ++DVNDN P F Q SY V ENNP G SI ++A DPD G + +V+Y
Sbjct: 430 PPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSY 489
Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
S+ + + SYVS+++ +GV++A R+FD+EQLR +L + A D G+P LS+NVSL
Sbjct: 490 SIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLR 549
Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
+ V D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L
Sbjct: 550 VLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 609
Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
+ASEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ + AD +
Sbjct: 610 QASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQ 669
Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
++L DL + P DP+ L YLVVA+A +S +F VI+ + LRLR +S
Sbjct: 670 EVLPDLSDRREPSDPQ-AKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQ 728
Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF----PQPNYADTLLSEESC 785
L+ P + YS+ + + + S K+ F P+ A L+ + +
Sbjct: 729 PGLSSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNAS 786
Query: 786 EKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 845
+ + V + ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE
Sbjct: 787 WEQNTNHGAAGVPF-ASDTILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 845
Query: 846 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 905
MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN
Sbjct: 846 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 905
Query: 906 AAGKRDGKAPAGGNGNKKKSGKKEKK 931
AAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 906 AAGKRDGKAPAGGNGNKKKSGKKEKK 931
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 917 bits (2370), Expect = 0.0
Identities = 493/931 (52%), Positives = 633/931 (67%), Gaps = 32/931 (3%)
Query: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
LLLP + TL EP IRYS+PEEL KGS VGN+AKDLGL +++ R +R+ +
Sbjct: 20 LLLP-LFYPTLSEP----IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH 74
Query: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
F+++ SG L+ RIDRE++C + C + +VEN + I+ V V I D+ND+ P+
Sbjct: 75 --FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQ 132
Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
F +E+ +++ E+A+AGTRL L A D D+ +NS++ Y+++SN +FSL V +DG KYP
Sbjct: 133 FDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYP 192
Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
EL LE+ LDRE++ H L+LTALDGGDP S T HI ++V D NDN P+F+ EY +S+
Sbjct: 193 ELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLS 252
Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
EN+P G+ +L +TATD DEG+N ++ Y FR+ + F LD G I QS D+E+
Sbjct: 253 ENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDV 312
Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
Y MEV A+DGG L KV++ + D NDN+PE+I+TSL+ I E+ PG V+ALF
Sbjct: 313 ERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTR 372
Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
D D G NGE+ C+I ++PFK+ S +NYY L+T LDRE+T +YN+T+ D G PPL
Sbjct: 373 DLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPL 432
Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
S+ I L VAD+NDN P F Q SY V ENNP G SI V+A DPD G N ++YS+
Sbjct: 433 SSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIV 492
Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
+ +SSYVS+++ +GV++A R+FD+EQLR L + A D G+P LS+NVSL + V
Sbjct: 493 ASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLV 552
Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
D+NDN P +LYPAL DGS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612
Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
EPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ + AD + +IL
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEIL 672
Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRR---------WHKSR 723
DL DP+ +L YLVVA+A +S +FL VI+ + LRLRR +H
Sbjct: 673 PDLSDRPVLSDPQ-AELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGL 731
Query: 724 LLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEE 783
+++ VP ++ G +Y+ ++ T + L P +++ +
Sbjct: 732 CVKSG----PVVPPNYSEG-----TLPYSYNLCIAHTGTKEFNFLKCSVPLHSN---EDM 779
Query: 784 SCEKSEPLLM---SDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
C S L+ + + E QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 780 VCSVSPGALIPPHGGEDLTSHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 839
Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 840 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 899
Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930
>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 917 bits (2370), Expect = 0.0
Identities = 507/947 (53%), Positives = 639/947 (67%), Gaps = 47/947 (4%)
Query: 7 GWGCGEL-------LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQEL 59
G G GEL +L LL C QIRY +PEE+ KGS VGN+A DLG QEL
Sbjct: 2 GSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQEL 61
Query: 60 AERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGV 119
R +R+ S F ++ SG L+ + R+DREE+C + P C + F + EN + Y V
Sbjct: 62 PTRKLRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHV 119
Query: 120 EVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFS 179
VEI DIND+ P+F +++++E+A GTR +L A DAD+G N+L++YQLS + HFS
Sbjct: 120 NVEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFS 179
Query: 180 LDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNA 239
L +DG KYPE+VL+ PLDREK+ + L LTALD G P LS T I V V DANDNA
Sbjct: 180 LINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNA 239
Query: 240 PLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLG 299
P+F+ Y VS+ EN+ GT +L +TATD DEG+N ++T+SF +E +I++ F L+SN G
Sbjct: 240 PVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSF-SEASQITQ-FDLNSNTG 297
Query: 300 EISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISED 359
EI+ L +LD+EE + Y + + A+DGG ++A V V V D NDNAPEVI SL + I ED
Sbjct: 298 EITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMED 357
Query: 360 CLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYN 419
GT IAL V D DS NGE+ C + ++PFK+ S N Y L+T LDRE+ +YN
Sbjct: 358 AELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYN 417
Query: 420 ITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDP 479
IT+T D G PPLS+ S I L + DVNDN P F Q+SY V ENNP G SI V A DP
Sbjct: 418 ITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDP 477
Query: 480 DSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGN 539
D G N +V+Y + + LSSYVSI++++GV++A R+FD+EQLR +L + A D G+
Sbjct: 478 DLGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGS 537
Query: 540 PPLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 599
P LS+NVSL + V D+NDN P +LYPAL DGS ++ P +AEPGYLVTKVVAVD DSG
Sbjct: 538 PALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSG 597
Query: 600 QNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFT 659
NAWLSY +L+ASEPGLF++GL TGEVRTARAL DRDA++Q L+VAV D GQPPLSAT T
Sbjct: 598 HNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATAT 657
Query: 660 VTVAVADRIPDILADLGSIKTPIDPEDL--DLTLYLVVAVAAVSCVFLAFVIVLLVLRLR 717
+ + AD + ++L D I DP DL +L YLVVA+A +S +FL +I+ + LRLR
Sbjct: 658 LHLVFADSLQEVLPD---ITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLR 714
Query: 718 R---------WHKSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHL 768
R + +++E + VP ++ G YS+ + + A + K+
Sbjct: 715 RSSSPASWSCFQPGLCVKSE----SVVPPNYSEGT-------LPYSYNLCV-AHTGKTEF 762
Query: 769 IF----PQPNYADTLLSEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPG 824
F Q + +L +S PL S ++ ++ QQAPPNTDWRFSQAQRPG
Sbjct: 763 NFLKCSEQLSSGQDILCGDSSGALFPLCNSSELTSH------QQAPPNTDWRFSQAQRPG 816
Query: 825 TSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTL 884
TSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTL
Sbjct: 817 TSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTL 876
Query: 885 QHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
QHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 877 QHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,358,050
Number of Sequences: 37866
Number of extensions: 1689299
Number of successful extensions: 10646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3384
Number of HSP's gapped (non-prelim): 682
length of query: 931
length of database: 18,247,518
effective HSP length: 112
effective length of query: 819
effective length of database: 14,006,526
effective search space: 11471344794
effective search space used: 11471344794
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.