Guide to the Human Genome
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Search of human proteins with 11056024

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11056024 protocadherin gamma subfamily A, 5 isoform 1
precursor [Homo sapiens]
         (931 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1841   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1587   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1394   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1387   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1386   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1385   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1383   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1378   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1378   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1377   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1368   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1353   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1342   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1140   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1134   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1133   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1131   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1130   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1128   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1127   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1126   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1115   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1110   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1093   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...   940   0.0  
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs...   929   0.0  
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs...   925   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   920   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...   917   0.0  
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...   917   0.0  

>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1841 bits (4769), Expect = 0.0
 Identities = 931/931 (100%), Positives = 931/931 (100%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
           LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
           SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840

Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
           QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900

Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1587 bits (4109), Expect = 0.0
 Identities = 807/807 (100%), Positives = 807/807 (100%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA
Sbjct: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
           LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780

Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQ 807
           SEESCEKSEPLLMSDKVDANKEERRVQ
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEERRVQ 807


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1394 bits (3609), Expect = 0.0
 Identities = 714/931 (76%), Positives = 786/931 (84%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+PP       LL   +LLG L E  + QI YS+ EE ++GS VGNIAKDLGL P+ELA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ERGVRIVSRGRTQLFALNPRSG+LVTAGRIDREELC +SP CV N  IL+E+ +KI  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEIID+NDN P F  E+ ++KV EN   G R  LP A D DVGVNSL+ YQL+SN +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DV SG DG KYPELVLE+ LDRE+E VH L+LTA DGGDPV SGT  I + ++D NDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +FT  EY VSV EN+PVGTRLL + ATDPDEG NG +TYSFR   +KIS+ FQL+S  G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           I+ L  LDYE+S FY ++V A DG  L A +KV+VTV D NDNAPEV +TSLTSS+ E  
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
            PGTVIALF+VHD DSG NG + CSIP NLPF LEK+  NYY LLT R LDREE S+YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+T  D GTPPLSTE+HI L+V D+NDNPP FP ASYS  + ENNPRG SI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           SGDNAR+TYSLAEDTFQGAPLSSYVSINS+TG+LYAL SFDYEQ RDLQL +TASDSG+P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSY LLK+SEPGLFAVGLHTGEVRTARALLDRDALKQ LVV V+DHGQPPLSAT T+
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVAD IPD+LADLGS+K   DP+D  LTLYLVVAVAAVSCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLL AEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTL+
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
           S ESCEKSEPLL++  +   K +  +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840

Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
           QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900

Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1387 bits (3591), Expect = 0.0
 Identities = 714/932 (76%), Positives = 788/932 (84%), Gaps = 1/932 (0%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA P R     E +L   LLGTL    + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEI+DINDN PRF  EEL+VK+ ENAA  +R  L    D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DV S   G KYPELVLE  LDRE E V+ L+LTA+DGGDPV S    I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +FT   Y VSVPEN+PVGT +L +TATD DEG++G++TYSF    EKIS+ F L+   GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           IST  +LDYE+S FY + V A+DG  L   AKV++T+ DVNDN PEV++TS + +I+E  
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
            PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T   LDREE   YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+T  D GTPPLSTE+ I L VAD NDNPP FP +SYS  V ENNPRG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
              NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVADRIPDILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQA G  LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
           ++ES EKSEPLL++ D ++   E R++QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1386 bits (3587), Expect = 0.0
 Identities = 702/920 (76%), Positives = 784/920 (85%), Gaps = 1/920 (0%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           L L   LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
           QLF+LNP+SGSLVTA RIDREELCAQ PLC+V  NILVE+K+KI+ VE+EI DINDN P 
Sbjct: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           F  EEL++K+ E    GTR  +  A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVLE+ LDREK+ +H L+L A DGGDPV SG  HI+V VLDANDN P+FT  EY VSV 
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           EN+PVGTRLL + ATDPDEG N +++Y       KI+E F L+S  GE+S L+SLDYE++
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
            FY +++ AQDG  L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+   G  IAL  VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DSG+NG++   +  NLPFKLEKS+D YY L+T   LDRE+ S+YNI+L   D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           STE+HI L V D+NDNPP FP  SYS  + ENNPRG SIFSVTA DPDS +NAR+TY+L 
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
           EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
           ADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792

Query: 793 MS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
           ++ D ++   +   +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852

Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912

Query: 912 GKAPAGGNGNKKKSGKKEKK 931
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1385 bits (3584), Expect = 0.0
 Identities = 698/923 (75%), Positives = 783/923 (84%)

Query: 9   GCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVS 68
           GC  L+L  + L  L E G+G I YS+PEE DKGSFVGNIAKDLGL+PQELA+ GVRIVS
Sbjct: 9   GCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVS 68

Query: 69  RGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDIND 128
           RGR  LFALNPRSGSL+TA RIDREELCAQS  C+V+FNILVE+KMK++ VEVEIIDIND
Sbjct: 69  RGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDIND 128

Query: 129 NFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDG 188
           N P+F+ EEL+ K+NE    GTR+ LPF +D DVG+NSL+SYQLSSN HFSLDV  G DG
Sbjct: 129 NTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADG 188

Query: 189 QKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYS 248
            ++PE+VL+ PLDRE+E VH L+LTA DGG+PV SGT  I + V+DANDN P FT ++Y 
Sbjct: 189 PQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYH 248

Query: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLD 308
           ++VPEN+P+GT+LLM+ ATDPDEG NG++TYSF N + ++++ F+LDS  GEIS  + LD
Sbjct: 249 INVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLD 308

Query: 309 YEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIAL 368
           +EE + Y MEV AQDG  L+A  KV++ V DVNDNAPEV +TS+T+++ E+  PGT+IAL
Sbjct: 309 FEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIAL 368

Query: 369 FSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHG 428
            SVHD DSG+NG   C IP NLPFKLEK VDNYY L+T R LDRE  S YNIT+T +D G
Sbjct: 369 ISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQG 428

Query: 429 TPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVT 488
           TP LSTE+HI L V D+NDN P F Q SYS  + ENNPRG SIFSV AHD DS +NA++T
Sbjct: 429 TPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQIT 488

Query: 489 YSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSL 548
           YSL EDT QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+QL V A DSG+PPLSSNVSL
Sbjct: 489 YSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSL 548

Query: 549 SLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 608
           SLF+LDQNDN PEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRL
Sbjct: 549 SLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608

Query: 609 LKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRI 668
           LKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668

Query: 669 PDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAE 728
            DILADLGS++    P D DLTLYLVVA AAVSCVFLAFVIVLL  RLRRWHKSRLLQA 
Sbjct: 669 SDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728

Query: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKS 788
           G  LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK 
Sbjct: 729 GGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKK 788

Query: 789 EPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
             L     +  +K+E   QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 789 GFLSAPQSLLEDKKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848

Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
           AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908

Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
           KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 909 KRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1383 bits (3580), Expect = 0.0
 Identities = 701/923 (75%), Positives = 780/923 (84%), Gaps = 1/923 (0%)

Query: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
           C +L+L   LL TL E  +GQIRYS+ EE+D+GSFVGNIAKDLGLEP  LAE+GVRIVSR
Sbjct: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69

Query: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
           GR+QLFALNPRSGSLVTA RIDREELCAQS  C++NFNIL+E+K+ IY VEVEI DINDN
Sbjct: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129

Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
            PRF  EEL++K++E    G R+ L  A DADVG N+L+ Y L+ N HFSLDV  G DG 
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189

Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
           KYPELVLE+ LDRE+E VH L+L A DGGDPVLSGT+ I V VLDANDNAP+FT  EY +
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249

Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
           S+PEN  VGTR+L +TATD DEG   ++ Y       + SE F+L S  GE++ ++ LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309

Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
           E++ F+ +++ AQDG  L+  AKV+VTV DVNDNAPE  +TS TSS+SED LPGT+I LF
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369

Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
           +VHD DSG+N    CS+P +LPFKLEKSVDNYY L+TTR LDRE+ S YNITLT  D G 
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429

Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
           P LST++HI L+VAD+NDN P F + SYST + ENNPRG S+FSVTAHDPDS DNA VTY
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489

Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
           S AEDT QGAPLSSY+SINSDTGVLYALRSFDYEQLRDLQ+WV A DSGNPPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549

Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
           LFVLDQNDN PEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609

Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
           KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVA++DHGQPPLSAT T+TVAVADRIP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669

Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
           DILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729

Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
             L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK +
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789

Query: 790 PLLMSDK-VDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
            L      ++  +EE   QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 790 FLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 849

Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
           AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 850 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 909

Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
           KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 910 KRDGKAPAGGNGNKKKSGKKEKK 932


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1378 bits (3567), Expect = 0.0
 Identities = 705/932 (75%), Positives = 787/932 (84%), Gaps = 1/932 (0%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+ PRG       L  +LLGT  E  +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1   MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS  C+VNFNIL+E+KM +Y ++
Sbjct: 61  ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEIIDINDN PRF  EE+ VK+ EN A G R  L  A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
            V SG D  KYPELVLE+ LDRE+E VH L+LTA DGGDP  S T HI+VTV+D ND+ P
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +F+  +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR    K+ + F L+S  GE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           ISTL+ LDYEE+ FY MEV AQDG   +  AKV++TV DVNDNAPEV +TSL+SSI ED 
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
             GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE  S YNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           TL   D GTPPLS E+HI ++VAD NDNPP FP +SYS  + ENNPRG SIF VTA D D
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVAD IP++LADLGS++    P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQA    LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780

Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
           S+ESCEK++ LL S D  +  +    +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1378 bits (3566), Expect = 0.0
 Identities = 698/923 (75%), Positives = 786/923 (85%), Gaps = 1/923 (0%)

Query: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
           C  L+L  +  G   E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73

Query: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
           GRTQLF+LNPRSGSL+TAGRIDREELCAQS  CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133

Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
            P+F+ E L VK+NEN AAG R  LP A D DVGVNSL+SYQLS N HFSL V S  +G 
Sbjct: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193

Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
           KYPELVLE  LDRE+E +H L+LTA DGGDP+ SGT  + VTV DANDNAP+FT  EY V
Sbjct: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253

Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
           SVPEN+PVGT+LL +TATD DEG NG++TYSFR   +     FQL+   GEI   ++LDY
Sbjct: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313

Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
           EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED   GTV+AL 
Sbjct: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373

Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
           +VHD DS +NG++ CSI   LPFKLEKS+D+YY L+  R LDRE+ S YNIT+T  D G+
Sbjct: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433

Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
           PPLSTE+H  L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493

Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
           SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ  +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553

Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
           LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613

Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
           KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673

Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
            +LADLGS ++P + E  DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733

Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
             L GV  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793

Query: 790 PL-LMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 848
           PL L+ D     ++   V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 794 PLSLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 853

Query: 849 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 908
           AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 854 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 913

Query: 909 KRDGKAPAGGNGNKKKSGKKEKK 931
           KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 KRDGKAPAGGNGNKKKSGKKEKK 936


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1377 bits (3563), Expect = 0.0
 Identities = 703/932 (75%), Positives = 784/932 (84%), Gaps = 1/932 (0%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+P      GEL+L   LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           + GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           +EIIDINDN P+F+ E+L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DV +G +G   PELVLE+ LDRE+E  H L+LTA DGG P  S T  I VTVLD NDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +F    Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR   EK +  FQL+ N GE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           IS  +SLDYEE  FY ME+ A+D GAL+   K++++V+DVNDN PEVI+TSL S + E+ 
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
           LPGTVIA  SVHD DSG+NG++ C    NLPFKLEKS+ NYY L+T + LDRE  S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+   D GTPPLSTE+ I L VAD+NDNPP FP ASYS  + ENN RG SIFS+TAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVAD IP++L +LGS+K  +DP D  LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQ  G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
           S+E CEK++ LL S D  +   E    QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1368 bits (3541), Expect = 0.0
 Identities = 695/920 (75%), Positives = 781/920 (84%), Gaps = 1/920 (0%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           L+L  +LLGTL E G  QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
           QLFALNPRSGSLVTAGRIDREELC  +  C +N +IL+E+K+KIYGVEVE+ DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           FR+ EL++K++ENAA   R  LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVL++ LDRE++  H L+LTA DGGDPV +GT  IRV VLDANDNAP F   EY  SVP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           EN+ +GT+LL++ ATDPDEG+N ++ YSFR  ++K ++ F+LD N G IST+  LD+EES
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
            FY MEV A D     A AKV++TV DVNDNAPEV+LTSL SS+ E+   GT+IAL +V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DS ENG++ C I  NLPFKLEKS  NYY L+T   LDRE+   YNIT+T  D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           STE+HI L VAD NDNPP FPQASYS  + ENNPRGVS+ SVTAHDPD  +NA++TYSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
           E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
           ADLGS+++P + E  DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
            G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 793 MS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
           +S D V +      ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 LSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852

Query: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
           LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912

Query: 912 GKAPAGGNGNKKKSGKKEKK 931
           GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1353 bits (3503), Expect = 0.0
 Identities = 691/922 (74%), Positives = 773/922 (83%), Gaps = 3/922 (0%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           LLL  + LGTL    + QIRYS+PEE +KGSFVGNI+KDLGLEP+ELA+RGVRIVSRG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
           QLFA+NPRSGSL+TAGRIDREELC     C +N  +LVE+ +KIYGVEVEIIDINDN P 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           F+++E+++KV+E+A  G R  LP ARD DVGVNSL+SYQLS N +FSL +   TDG K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVLE  LDREKE  H LLLTALDGGDP+  G   IRV VLD ND+ P+FT S Y VSVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           ENI  GTR+LM+ ATDPDEGING++ YSFRN E K SE FQLDS  GE+    SLD+E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
           RFY ME+  QDGG L  +  +++TV DVNDNAPE+ +TS  +SI E+  PGTVIAL +V 
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DSGENG+++C IP +LPFKLEK+  NYY L+T+R LDRE    YNITLT  D G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           S E+H+ L VAD NDNPP FP +SYS  + ENNPRG SIFSVTA DPDS  NA VTYSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
           +DT QG PLSSYVSINS+TGVLYAL+SFDYEQ RDL+L V A DSG+PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
           ADLGS+++  + E  DL+LYLVVAVAAVSC+FL FVIVLL LRL RWHKSRLLQA    L
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
           AG+P SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL+S+ESCEKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793

Query: 793 MSDK---VDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 849
           +++    +    +    QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 794 IAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 853

Query: 850 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 909
           MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 854 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 913

Query: 910 RDGKAPAGGNGNKKKSGKKEKK 931
           RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 914 RDGKAPAGGNGNKKKSGKKEKK 935


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1342 bits (3473), Expect = 0.0
 Identities = 688/932 (73%), Positives = 769/932 (82%), Gaps = 1/932 (0%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+P +    G L+L   LLG L E  + QIRYS+PEE +KG  VGNI+KDL LEP+ELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           +E+ DIND+ P+F+ E L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           +V +G +G   PELVLE+ LDRE+ T H L+LTA DGG+P  S T  I VTVLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +F    Y V V EN+P GT LL  TA+D DEGINGK+ Y F    EK S  FQL+ N GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           IST +SLDYEE  FY ME+ A+DGG L    KV+++V+DVNDN PEV +TSL S + ED 
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
             GTVI LF+ HD DSG+NG++ CSI  NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+T  D GTPPLSTE HI L+V D+NDNPP F QASYS  + ENN RG SIFSV A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVA+AD IPDILADLGS++ P D E  DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
            S LL+A    LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 839
           S++SCEK+EPL +S D     ++   V QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQQSCEKNEPLCVSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840

Query: 840 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 899
           NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900

Query: 900 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1140 bits (2949), Expect = 0.0
 Identities = 590/807 (73%), Positives = 662/807 (82%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+PP       LL   +LLG L E  + QI YS+ EE ++GS VGNIAKDLGL P+ELA
Sbjct: 1   MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ERGVRIVSRGRTQLFALNPRSG+LVTAGRIDREELC +SP CV N  IL+E+ +KI  VE
Sbjct: 61  ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEIID+NDN P F  E+ ++KV EN   G R  LP A D DVGVNSL+ YQL+SN +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DV SG DG KYPELVLE+ LDRE+E VH L+LTA DGGDPV SGT  I + ++D NDNAP
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +FT  EY VSV EN+PVGTRLL + ATDPDEG NG +TYSFR   +KIS+ FQL+S  G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           I+ L  LDYE+S FY ++V A DG  L A +KV+VTV D NDNAPEV +TSLTSS+ E  
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
            PGTVIALF+VHD DSG NG + CSIP NLPF LEK+  NYY LLT R LDREE S+YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+T  D GTPPLSTE+HI L+V D+NDNPP FP ASYS  + ENNPRG SI S+TA DPD
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           SGDNAR+TYSLAEDTFQGAPLSSYVSINS+TG+LYAL SFDYEQ RDLQL +TASDSG+P
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSY LLK+SEPGLFAVGLHTGEVRTARALLDRDALKQ LVV V+DHGQPPLSAT T+
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVAD IPD+LADLGS+K   DP+D  LTLYLVVAVAAVSCVFLAFV VLL L+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLL AEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTL+
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780

Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQ 807
           S ESCEKSEPLL++  +   K +  +Q
Sbjct: 781 SRESCEKSEPLLITQDLLETKGDPNLQ 807


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 592/817 (72%), Positives = 668/817 (81%), Gaps = 3/817 (0%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA P R     E +L   LLGTL    + QIRYS+PEEL+KGSFVGNI KDLGLEPQELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           E GVRIVSRGR QLF+LNPR+GSLVTAGRIDREELCAQSP C+V+FNILVE+K+ +Y VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEI+DINDN PRF  EEL+VK+ ENAA  +R  L    D DVG+NSL+ ++LS N HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DV S   G KYPELVLE  LDRE E V+ L+LTA+DGGDPV S    I VTVLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +FT   Y VSVPEN+PVGT +L +TATD DEG++G++TYSF    EKIS+ F L+   GE
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           IST  +LDYE+S FY + V A+DG  L   AKV++T+ DVNDN PEV++TS + +I+E  
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
            PGTVIALF V D DSG NG + CSIPR+LPF+LEKSV NYY L+T   LDREE   YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+T  D GTPPLSTE+ I L VAD NDNPP FP +SYS  V ENNPRG SIFSV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
              NA+V+YSLAEDT QGAPLSSYVSINSDTG+LYALRSFDYEQLRDLQLWVTASDSG+P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVADRIPDILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQA G  LA +P SHFVGV+GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SEESCEKSEPLLMS-DKVDANKEERRVQQA--PPNTD 814
           ++ES EKSEPLL++ D ++   E R++Q +  PP  +
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFFPPKRE 817


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1133 bits (2930), Expect = 0.0
 Identities = 578/796 (72%), Positives = 659/796 (82%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           L L   LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
           QLF+LNP+SGSLVTA RIDREELCAQ PLC+V  NILVE+K+KI+ VE+EI DINDN P 
Sbjct: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           F  EEL++K+ E    GTR  +  A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVLE+ LDREK+ +H L+L A DGGDPV SG  HI+V VLDANDN P+FT  EY VSV 
Sbjct: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           EN+PVGTRLL + ATDPDEG N +++Y       KI+E F L+S  GE+S L+SLDYE++
Sbjct: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
            FY +++ AQDG  L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+   G  IAL  VH
Sbjct: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DSG+NG++   +  NLPFKLEKS+D YY L+T   LDRE+ S+YNI+L   D G+PPL
Sbjct: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           STE+HI L V D+NDNPP FP  SYS  + ENNPRG SIFSVTA DPDS +NAR+TY+L 
Sbjct: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
           EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
           ADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792

Query: 793 MSDKVDANKEERRVQQ 808
           ++  +   K +  + Q
Sbjct: 793 ITQDLLEMKGDSNLLQ 808


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1131 bits (2926), Expect = 0.0
 Identities = 573/795 (72%), Positives = 658/795 (82%)

Query: 9   GCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVS 68
           GC  L+L  + L  L E G+G I YS+PEE DKGSFVGNIAKDLGL+PQELA+ GVRIVS
Sbjct: 9   GCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVS 68

Query: 69  RGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDIND 128
           RGR  LFALNPRSGSL+TA RIDREELCAQS  C+V+FNILVE+KMK++ VEVEIIDIND
Sbjct: 69  RGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDIND 128

Query: 129 NFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDG 188
           N P+F+ EEL+ K+NE    GTR+ LPF +D DVG+NSL+SYQLSSN HFSLDV  G DG
Sbjct: 129 NTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADG 188

Query: 189 QKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYS 248
            ++PE+VL+ PLDRE+E VH L+LTA DGG+PV SGT  I + V+DANDN P FT ++Y 
Sbjct: 189 PQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYH 248

Query: 249 VSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLD 308
           ++VPEN+P+GT+LLM+ ATDPDEG NG++TYSF N + ++++ F+LDS  GEIS  + LD
Sbjct: 249 INVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLD 308

Query: 309 YEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIAL 368
           +EE + Y MEV AQDG  L+A  KV++ V DVNDNAPEV +TS+T+++ E+  PGT+IAL
Sbjct: 309 FEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIAL 368

Query: 369 FSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHG 428
            SVHD DSG+NG   C IP NLPFKLEK VDNYY L+T R LDRE  S YNIT+T +D G
Sbjct: 369 ISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQG 428

Query: 429 TPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVT 488
           TP LSTE+HI L V D+NDN P F Q SYS  + ENNPRG SIFSV AHD DS +NA++T
Sbjct: 429 TPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQIT 488

Query: 489 YSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSL 548
           YSL EDT QGAPLS+Y+SINSDTGVLYALRSFDYEQ RD+QL V A DSG+PPLSSNVSL
Sbjct: 489 YSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSL 548

Query: 549 SLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRL 608
           SLF+LDQNDN PEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVD+DSGQNAWLSYRL
Sbjct: 549 SLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608

Query: 609 LKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRI 668
           LKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI 668

Query: 669 PDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAE 728
            DILADLGS++    P D DLTLYLVVA AAVSCVFLAFVIVLL  RLRRWHKSRLLQA 
Sbjct: 669 SDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 728

Query: 729 GSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKS 788
           G  LA +P SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK 
Sbjct: 729 GGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKK 788

Query: 789 EPLLMSDKVDANKEE 803
             L     +  +K+E
Sbjct: 789 GFLSAPQSLLEDKKE 803


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 576/799 (72%), Positives = 654/799 (81%)

Query: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
           C +L+L   LL TL E  +GQIRYS+ EE+D+GSFVGNIAKDLGLEP  LAE+GVRIVSR
Sbjct: 10  CRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSR 69

Query: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
           GR+QLFALNPRSGSLVTA RIDREELCAQS  C++NFNIL+E+K+ IY VEVEI DINDN
Sbjct: 70  GRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDN 129

Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
            PRF  EEL++K++E    G R+ L  A DADVG N+L+ Y L+ N HFSLDV  G DG 
Sbjct: 130 APRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGN 189

Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
           KYPELVLE+ LDRE+E VH L+L A DGGDPVLSGT+ I V VLDANDNAP+FT  EY +
Sbjct: 190 KYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRI 249

Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
           S+PEN  VGTR+L +TATD DEG   ++ Y       + SE F+L S  GE++ ++ LDY
Sbjct: 250 SIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDY 309

Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
           E++ F+ +++ AQDG  L+  AKV+VTV DVNDNAPE  +TS TSS+SED LPGT+I LF
Sbjct: 310 EDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLF 369

Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
           +VHD DSG+N    CS+P +LPFKLEKSVDNYY L+TTR LDRE+ S YNITLT  D G 
Sbjct: 370 NVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGN 429

Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
           P LST++HI L+VAD+NDN P F + SYST + ENNPRG S+FSVTAHDPDS DNA VTY
Sbjct: 430 PSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTY 489

Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
           S AEDT QGAPLSSY+SINSDTGVLYALRSFDYEQLRDLQ+WV A DSGNPPLSSNVSLS
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLS 549

Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
           LFVLDQNDN PEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LL
Sbjct: 550 LFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLL 609

Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
           KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVA++DHGQPPLSAT T+TVAVADRIP
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIP 669

Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
           DILADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 670 DILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 729

Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
             L G+ +SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK +
Sbjct: 730 GSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789

Query: 790 PLLMSDKVDANKEERRVQQ 808
            L     +   + E    Q
Sbjct: 790 FLSAPQSLLEEEREETFSQ 808


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1128 bits (2918), Expect = 0.0
 Identities = 572/786 (72%), Positives = 658/786 (83%)

Query: 10  CGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
           C  L+L  +  G   E G+ QI YS+PEEL+KGSFVGNI+KDLGL P+ELAERGVRIVSR
Sbjct: 14  CSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSR 73

Query: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
           GRTQLF+LNPRSGSL+TAGRIDREELCAQS  CVV+FNILVE+++K++G+E+E+ DINDN
Sbjct: 74  GRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDN 133

Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
            P+F+ E L VK+NEN AAG R  LP A D DVGVNSL+SYQLS N HFSL V S  +G 
Sbjct: 134 APKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGV 193

Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
           KYPELVLE  LDRE+E +H L+LTA DGGDP+ SGT  + VTV DANDNAP+FT  EY V
Sbjct: 194 KYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRV 253

Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
           SVPEN+PVGT+LL +TATD DEG NG++TYSFR   +     FQL+   GEI   ++LDY
Sbjct: 254 SVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDY 313

Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
           EE+ FY +E+ A+DGGA +A+AKV++TV+DVNDN+PE+ +TSL S ++ED   GTV+AL 
Sbjct: 314 EETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALL 373

Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
           +VHD DS +NG++ CSI   LPFKLEKS+D+YY L+  R LDRE+ S YNIT+T  D G+
Sbjct: 374 NVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGS 433

Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
           PPLSTE+H  L+VAD+NDNPP F Q SY T + ENN RG SIFSVTA DPDS +NA++ Y
Sbjct: 434 PPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIY 493

Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
           SLAEDT QG PLSSY+SINSDTGVLYALRSFDYEQ  +LQ+ VTASDSG+PPLSSNVSLS
Sbjct: 494 SLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLS 553

Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
           LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLL
Sbjct: 554 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 613

Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
           KASEPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP
Sbjct: 614 KASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP 673

Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
            +LADLGS ++P + E  DLTLYLVVAVAAVSCVFLAFVIVLL  RLRRWHKSRLLQA G
Sbjct: 674 QVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASG 733

Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSE 789
             L GV  SHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEK++
Sbjct: 734 GGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKND 793

Query: 790 PLLMSD 795
           PL + D
Sbjct: 794 PLSLLD 799


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1127 bits (2916), Expect = 0.0
 Identities = 583/811 (71%), Positives = 662/811 (81%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+ PRG       L  +LLGT  E  +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1   MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS  C+VNFNIL+E+KM +Y ++
Sbjct: 61  ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           VEIIDINDN PRF  EE+ VK+ EN A G R  L  A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
            V SG D  KYPELVLE+ LDRE+E VH L+LTA DGGDP  S T HI+VTV+D ND+ P
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +F+  +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR    K+ + F L+S  GE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           ISTL+ LDYEE+ FY MEV AQDG   +  AKV++TV DVNDNAPEV +TSL+SSI ED 
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
             GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE  S YNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           TL   D GTPPLS E+HI ++VAD NDNPP FP +SYS  + ENNPRG SIF VTA D D
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVAD IP++LADLGS++    P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQA    LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780

Query: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPP 811
           S+ESCEK++ LL S      KE     Q  P
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSP 811


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1126 bits (2912), Expect = 0.0
 Identities = 578/803 (71%), Positives = 658/803 (81%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+P      GEL+L   LLGTL E G GQIRYS+PEE DKGSFVGNI+KDLGL+P++LA
Sbjct: 1   MAAPQSRPRRGELILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           + GVRIVSRGRTQLFALNPRSGSL+TAGRIDREELCAQSP C++N N LVE+K K++GVE
Sbjct: 61  KHGVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           +EIIDINDN P+F+ E+L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEIIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           DV +G +G   PELVLE+ LDRE+E  H L+LTA DGG P  S T  I VTVLD NDNAP
Sbjct: 181 DVQTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +F    Y V V EN+P GTRLL +TA+DPDEGINGK+ Y FR   EK +  FQL+ N GE
Sbjct: 241 VFPHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           IS  +SLDYEE  FY ME+ A+D GAL+   K++++V+DVNDN PEVI+TSL S + E+ 
Sbjct: 301 ISIAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENS 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
           LPGTVIA  SVHD DSG+NG++ C    NLPFKLEKS+ NYY L+T + LDRE  S YNI
Sbjct: 361 LPGTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+   D GTPPLSTE+ I L VAD+NDNPP FP ASYS  + ENN RG SIFS+TAHDPD
Sbjct: 421 TVMASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           S +NA+VTYS+ EDT QGAPLSSY+SINSDTGVLYAL+SFDYEQ+RDLQL VTASDSG+P
Sbjct: 481 SQENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRLLKASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVAVAD IP++L +LGS+K  +DP D  LTLYLVVAVAA+SCVFLAFV VLL LRLRRWH
Sbjct: 661 TVAVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
           KSRLLQ  G RL GVPASHFVGV+ V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLI 780

Query: 781 SEESCEKSEPLLMSDKVDANKEE 803
           S+E CEK++ LL S      K E
Sbjct: 781 SQEGCEKNDSLLTSVDFHEYKNE 803


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1115 bits (2885), Expect = 0.0
 Identities = 569/782 (72%), Positives = 652/782 (83%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           L+L  +LLGTL E G  QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
           QLFALNPRSGSLVTAGRIDREELC  +  C +N +IL+E+K+KIYGVEVE+ DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           FR+ EL++K++ENAA   R  LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVL++ LDRE++  H L+LTA DGGDPV +GT  IRV VLDANDNAP F   EY  SVP
Sbjct: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           EN+ +GT+LL++ ATDPDEG+N ++ YSFR  ++K ++ F+LD N G IST+  LD+EES
Sbjct: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
            FY MEV A D     A AKV++TV DVNDNAPEV+LTSL SS+ E+   GT+IAL +V+
Sbjct: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DS ENG++ C I  NLPFKLEKS  NYY L+T   LDRE+   YNIT+T  D GTPPL
Sbjct: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           STE+HI L VAD NDNPP FPQASYS  + ENNPRGVS+ SVTAHDPD  +NA++TYSLA
Sbjct: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
           E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
           ADLGS+++P + E  DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
            G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792

Query: 793 MS 794
           +S
Sbjct: 793 LS 794


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1110 bits (2871), Expect = 0.0
 Identities = 572/807 (70%), Positives = 653/807 (80%), Gaps = 7/807 (0%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           LLL  + LGTL    + QIRYS+PEE +KGSFVGNI+KDLGLEP+ELA+RGVRIVSRG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
           QLFA+NPRSGSL+TAGRIDREELC     C +N  +LVE+ +KIYGVEVEIIDINDN P 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           F+++E+++KV+E+A  G R  LP ARD DVGVNSL+SYQLS N +FSL +   TDG K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVLE  LDREKE  H LLLTALDGGDP+  G   IRV VLD ND+ P+FT S Y VSVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           ENI  GTR+LM+ ATDPDEGING++ YSFRN E K SE FQLDS  GE+    SLD+E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
           RFY ME+  QDGG L  +  +++TV DVNDNAPE+ +TS  +SI E+  PGTVIAL +V 
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DSGENG+++C IP +LPFKLEK+  NYY L+T+R LDRE    YNITLT  D G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           S E+H+ L VAD NDNPP FP +SYS  + ENNPRG SIFSVTA DPDS  NA VTYSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
           +DT QG PLSSYVSINS+TGVLYAL+SFDYEQ RDL+L V A DSG+PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLFAVG HTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP++L
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
           ADLGS+++  + E  DL+LYLVVAVAAVSC+FL FVIVLL LRL RWHKSRLLQA    L
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
           AG+P SHFVGVDGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTL+S+ESCEKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793

Query: 793 MSD-------KVDANKEERRVQQAPPN 812
           +++       K D    + R    PPN
Sbjct: 794 IAEDSAIILGKCDPTSNQVRFISLPPN 820


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 562/794 (70%), Positives = 641/794 (80%)

Query: 1   MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
           MA+P +    G L+L   LLG L E  + QIRYS+PEE +KG  VGNI+KDL LEP+ELA
Sbjct: 1   MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELA 60

Query: 61  ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
           ER VRIVSRGRTQLF+LNPRSG+LVTAGRIDREELCAQSP C+VNF +LVE+++K+YG+E
Sbjct: 61  ERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIE 120

Query: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
           +E+ DIND+ P+F+ E L+VK+NE A  G R  LP A D DVGVNSL+SYQLS N HFSL
Sbjct: 121 IEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSL 180

Query: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
           +V +G +G   PELVLE+ LDRE+ T H L+LTA DGG+P  S T  I VTVLD NDNAP
Sbjct: 181 NVQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAP 240

Query: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
           +F    Y V V EN+P GT LL  TA+D DEGINGK+ Y F    EK S  FQL+ N GE
Sbjct: 241 VFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGE 300

Query: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
           IST +SLDYEE  FY ME+ A+DGG L    KV+++V+DVNDN PEV +TSL S + ED 
Sbjct: 301 ISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDA 360

Query: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
             GTVI LF+ HD DSG+NG++ CSI  NL F LE S ++YY LLT + LDRE+ S+YNI
Sbjct: 361 PQGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNI 420

Query: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
           T+T  D GTPPLSTE HI L+V D+NDNPP F QASYS  + ENN RG SIFSV A+DPD
Sbjct: 421 TVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPD 480

Query: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
           S +N+RV YSLAEDT QG+PLS+YVSINSDTGVLYAL SFDYEQ RDLQ+ VTASDSG+P
Sbjct: 481 SNENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSP 540

Query: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
           PLSSNVSL LFVLDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
           NAWLSYRL KASEPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
           TVA+AD IPDILADLGS++ P D E  DLTLYLVVAVA VSCVFL FVI LL LRLR WH
Sbjct: 661 TVAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWH 720

Query: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
            S LL+A    LAGVP SHFVGVDGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTL+
Sbjct: 721 SSHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SEESCEKSEPLLMS 794
           S++SCEK+EPL +S
Sbjct: 781 SQQSCEKNEPLCVS 794


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  940 bits (2429), Expect = 0.0
 Identities = 508/941 (53%), Positives = 635/941 (67%), Gaps = 35/941 (3%)

Query: 7   GWGCGEL-------LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQEL 59
           G G GEL       +L   LL   C     QIRY +PEE+ KGS VGN+A DLG   QEL
Sbjct: 2   GSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQEL 61

Query: 60  AERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGV 119
             R +R+ S      F ++  SG L+ + R+DREE+C + P C + F  + EN +  Y V
Sbjct: 62  PTRKLRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHV 119

Query: 120 EVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFS 179
            VEI DIND+ P+F     +++++E+A  GTR +L  A DAD+G+NSL+ Y+LS N  FS
Sbjct: 120 NVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFS 179

Query: 180 LDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNA 239
           L +    DG KYPEL LE+ LDRE+++ H L+LTALDGG P LSGTT +R+ V DANDN 
Sbjct: 180 LIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNP 239

Query: 240 PLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLG 299
           P+F    Y VS+ EN+P GT +L ++ATD DEGIN ++TYSF     +  + F L+S  G
Sbjct: 240 PVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFY----RTGQIFSLNSKSG 295

Query: 300 EISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISED 359
           EI+T + LD+EE++ Y M V  +DGG LVA   V + +QD NDN+PEV   SL   I E+
Sbjct: 296 EITTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILEN 355

Query: 360 CLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYN 419
            +PGT+IAL  +HD DSGENGE+ C +   +PFK+  S  N Y L+T   LDRE+T +YN
Sbjct: 356 AVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYN 415

Query: 420 ITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDP 479
           +T+T  D G PPLS+   + L + DVNDN P F QASY  SV ENNP G SI  V A D 
Sbjct: 416 VTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDL 475

Query: 480 DSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGN 539
           D G N +V+YS+     +   L+SYVS+++ +GV++A R+FDYEQLR  +L + A D G+
Sbjct: 476 DLGLNGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGS 535

Query: 540 PPLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 599
           P LS+NVSL + V D+NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG
Sbjct: 536 PALSANVSLRVLVGDRNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSG 595

Query: 600 QNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFT 659
            NAWLSY +L+ASEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T
Sbjct: 596 HNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATAT 655

Query: 660 VTVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRW 719
           + +  AD + ++L D+     P DP+  +L  YLVVA+A +S +FL  VI+ + LRLRR 
Sbjct: 656 LHLVFADSLQEVLPDITDRPVPSDPQ-AELQFYLVVALALISVLFLLAVILAVALRLRRS 714

Query: 720 HKSRLLQAEGSRLAG-----VPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF---- 770
                       L       VP ++  G          YS+ + + A + K+   F    
Sbjct: 715 SSPAAWSCFQPGLCVKSGPVVPPNYSQGT-------LPYSYNLCV-AHTGKTEFNFLKCS 766

Query: 771 PQPNYADTLLSEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQN 830
            Q +    +L  +S     PL  S +  ++ E     QAPPNTDWRFSQAQRPGTSGSQN
Sbjct: 767 EQLSSGQDILCGDSSGALFPLCNSSESTSHPE----LQAPPNTDWRFSQAQRPGTSGSQN 822

Query: 831 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 890
           GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY
Sbjct: 823 GDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDY 882

Query: 891 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 883 RQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923


>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score =  929 bits (2402), Expect = 0.0
 Identities = 493/925 (53%), Positives = 633/925 (68%), Gaps = 21/925 (2%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           LLLP +   TLCEP    IRYS+PEEL KGS VGN+AKDLGL   +++ R +R+ +    
Sbjct: 20  LLLP-LFYPTLCEP----IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKLH 74

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
             F+++ +SG L+   RIDRE++C +   C +    +VEN + I+ V V I D+ND+ P+
Sbjct: 75  --FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQ 132

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           FR +E+ ++++E+ + G   +L  A D D+ +NSL  YQLS N +FSL      DG KYP
Sbjct: 133 FRKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYP 192

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           ELVL++ LDRE ++ H L+LTALDGGDP  SGT  IR+ V+DANDN P+F+   Y VS+ 
Sbjct: 193 ELVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLR 252

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           E++P GT +L + ATD DEGIN ++TYSF    +K    F LD   G I T Q LD+EE 
Sbjct: 253 EDVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEV 312

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
             Y + + A+D G+L    KV+V V D NDN+PE+I+TSL+  I ED  PG V+ALF   
Sbjct: 313 ERYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTR 372

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D DSGENGE+ CS+ R +PFK+  S +NYY L+T   LDRE+T +YN+T+   D G PPL
Sbjct: 373 DQDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPL 432

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           S+   I L + DVNDN P F Q++Y   V ENN  G SI  V+A DPD G N RV+YSL 
Sbjct: 433 SSSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLI 492

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
               +   LSSYVS+++ +GV++A R+FD+EQLR  +L + A D G+P LS+NVSL + V
Sbjct: 493 ASDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLV 552

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
            D+NDN P +LYPAL  DGS   +  PR+A+PGYLVTKVVAVD DSG NAWLSY +++AS
Sbjct: 553 GDRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQAS 612

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLF++GL TGEVR  RAL D+D+++Q L+VAV D GQPPLSAT T+ +  AD + ++L
Sbjct: 613 EPGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVL 672

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
            D     TP D +  ++  YLVVA+A +S +FL  VI+ + LRLR+           S L
Sbjct: 673 PDFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVL 731

Query: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL----LSEESCEKS 788
                S  VG          Y++   +  D        P+ N+  ++     ++++  K 
Sbjct: 732 CS--KSGPVGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNLNKD 784

Query: 789 EPLLMSDKVDANKEERRV--QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 846
             LL S    + + ++++  QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 785 SMLLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 844

Query: 847 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 906
           LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 845 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 904

Query: 907 AGKRDGKAPAGGNGNKKKSGKKEKK 931
           AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 905 AGKRDGKAPAGGNGNKKKSGKKEKK 929


>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 927

 Score =  925 bits (2391), Expect = 0.0
 Identities = 503/936 (53%), Positives = 632/936 (67%), Gaps = 37/936 (3%)

Query: 12  ELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGR 71
           ++L PF LL   C   S QIRY++PEEL  GS VG +AKDLGL  +EL  R +R+ +   
Sbjct: 13  QVLFPF-LLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE-- 69

Query: 72  TQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFP 131
              F ++  SG L+  GRIDRE++C +   C + F  + EN M ++ V V I DINDN P
Sbjct: 70  -DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAP 128

Query: 132 RFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY 191
           RF  + + +++ E+A  G +  L  A+DADV  NSL+ Y ++ N +FSL      DG KY
Sbjct: 129 RFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKY 188

Query: 192 PELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSV 251
           P L+LE+PLDRE ++ H L+LTA+DGGDP LSGTTHI + V DANDNAP+F+   Y VS+
Sbjct: 189 PVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSL 248

Query: 252 PENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEE 311
            EN+P GT +L + ATD DEGIN ++TY+F N     S  F L+ N G+I+T  +LD+EE
Sbjct: 249 QENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEE 307

Query: 312 SRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSV 371
           +  Y++ V A+DGG   A   V + + D NDNAPEV   S ++ I ED   GTVIAL  V
Sbjct: 308 TSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKV 367

Query: 372 HDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP 431
            D DSG+NG + C     +PFKLE +  NYY L+    L+RE+T+DYN+T+   D G P 
Sbjct: 368 RDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPA 427

Query: 432 LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSL 491
           LS+ + I L ++D+NDN P F QASY   V+ENNP G SI  V+A DPD G N RV+YS+
Sbjct: 428 LSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSI 487

Query: 492 AEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLF 551
                +   L SYVS++  +GV++A R+FD+EQLR  +L + A D G+P LS+NVSL + 
Sbjct: 488 LASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 547

Query: 552 VLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKA 611
           V D NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 548 VGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 607

Query: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDI 671
           SEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ +  AD + ++
Sbjct: 608 SEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEV 667

Query: 672 LADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG-- 729
           L DL     P DP+  +L  YLVVA+A +S +FL  VI+ + LRLRR   S  L  EG  
Sbjct: 668 LPDLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCF 723

Query: 730 ------SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEE 783
                     GVP +H  G          YS+ + + + S K+   F   N    +   +
Sbjct: 724 QTGLCSKSGPGVPPNHSEGT-------LPYSYNLCIASHSAKTE--FNSLNLTPEMAPPQ 774

Query: 784 SCEKSEPLLMSDKVDANKEERRV--------QQAPPNTDWRFSQAQRPGTSGSQNGDDTG 835
                +P ++   V A+ E+ ++         QAPPNTDWRFSQAQRPGTSGSQNGDDTG
Sbjct: 775 DLLCDDPSMV---VCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTG 831

Query: 836 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 895
           TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY
Sbjct: 832 TWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVY 891

Query: 896 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 892 IPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 927


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  920 bits (2378), Expect = 0.0
 Identities = 490/926 (52%), Positives = 633/926 (68%), Gaps = 15/926 (1%)

Query: 12  ELLLPFMLLGTLCEPGS--GQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSR 69
           ++LLPF+L      PG+   QIRYS+PEEL K S VGN+AKDLGL  ++L  R +R+ + 
Sbjct: 15  QVLLPFLLS---LFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE 71

Query: 70  GRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDN 129
              + F +NP SG L+ + RIDRE++C + PLCV++F+ + EN + I+ + V + DINDN
Sbjct: 72  --KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDN 129

Query: 130 FPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQ 189
            P F+  ++ +K+ E+   GT   L  A D+DVG NSL+ Y L+ N +F L      DG+
Sbjct: 130 TPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGR 189

Query: 190 KYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSV 249
           KYPEL+L+  LDRE+ ++H L+LTA+DGGDP  SGTT IR+ V DANDN P+F+   Y V
Sbjct: 190 KYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRV 249

Query: 250 SVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDY 309
           ++ E++P G  +L +TATD DEGIN ++TYSF N +E++   F L+   GEI+T   LD+
Sbjct: 250 TLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDF 309

Query: 310 EESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALF 369
           E +  Y + + A+D G L A   + V + D ND APEVI+TS+++ + ED  PGTVIAL 
Sbjct: 310 EIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALI 369

Query: 370 SVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGT 429
              D DSGENGE+ C +  N  F L+ S  NYY L+T   LDREE  +YN+T+T  D G 
Sbjct: 370 KTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGK 429

Query: 430 PPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTY 489
           PPLS+   + L ++DVNDN P F Q SY   V ENNP G SI  ++A DPD G + +V+Y
Sbjct: 430 PPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSY 489

Query: 490 SLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLS 549
           S+     +   + SYVS+++ +GV++A R+FD+EQLR  +L + A D G+P LS+NVSL 
Sbjct: 490 SIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLR 549

Query: 550 LFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLL 609
           + V D NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L
Sbjct: 550 VLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVL 609

Query: 610 KASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIP 669
           +ASEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ +  AD + 
Sbjct: 610 QASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQ 669

Query: 670 DILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729
           ++L DL   + P DP+   L  YLVVA+A +S +F   VI+ + LRLR   +S       
Sbjct: 670 EVLPDLSDRREPSDPQ-AKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQ 728

Query: 730 SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF----PQPNYADTLLSEESC 785
             L+  P      +         YS+ + + + S K+   F    P+   A  L+ + + 
Sbjct: 729 PGLSSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNAS 786

Query: 786 EKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 845
            +      +  V     +  ++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE
Sbjct: 787 WEQNTNHGAAGVPF-ASDTILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 845

Query: 846 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 905
           MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN
Sbjct: 846 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 905

Query: 906 AAGKRDGKAPAGGNGNKKKSGKKEKK 931
           AAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 906 AAGKRDGKAPAGGNGNKKKSGKKEKK 931


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score =  917 bits (2370), Expect = 0.0
 Identities = 493/931 (52%), Positives = 633/931 (67%), Gaps = 32/931 (3%)

Query: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
           LLLP +   TL EP    IRYS+PEEL KGS VGN+AKDLGL   +++ R +R+ +    
Sbjct: 20  LLLP-LFYPTLSEP----IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH 74

Query: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
             F+++  SG L+   RIDRE++C +   C +    +VEN + I+ V V I D+ND+ P+
Sbjct: 75  --FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQ 132

Query: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
           F  +E+ +++ E+A+AGTRL L  A D D+ +NS++ Y+++SN +FSL V   +DG KYP
Sbjct: 133 FDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYP 192

Query: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
           EL LE+ LDRE++  H L+LTALDGGDP  S T HI ++V D NDN P+F+  EY +S+ 
Sbjct: 193 ELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLS 252

Query: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
           EN+P G+ +L +TATD DEG+N ++ Y FR+  +     F LD   G I   QS D+E+ 
Sbjct: 253 ENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDV 312

Query: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
             Y MEV A+DGG L    KV++ + D NDN+PE+I+TSL+  I E+  PG V+ALF   
Sbjct: 313 ERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTR 372

Query: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
           D D G NGE+ C+I  ++PFK+  S +NYY L+T   LDRE+T +YN+T+   D G PPL
Sbjct: 373 DLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPL 432

Query: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
           S+   I L VAD+NDN P F Q SY   V ENNP G SI  V+A DPD G N  ++YS+ 
Sbjct: 433 SSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIV 492

Query: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
               +   +SSYVS+++ +GV++A R+FD+EQLR   L + A D G+P LS+NVSL + V
Sbjct: 493 ASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLV 552

Query: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
            D+NDN P +LYPAL  DGS   ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612

Query: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
           EPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ +  AD + +IL
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEIL 672

Query: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRR---------WHKSR 723
            DL       DP+  +L  YLVVA+A +S +FL  VI+ + LRLRR         +H   
Sbjct: 673 PDLSDRPVLSDPQ-AELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGL 731

Query: 724 LLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEE 783
            +++       VP ++  G         +Y+  ++ T     + L    P +++    + 
Sbjct: 732 CVKSG----PVVPPNYSEG-----TLPYSYNLCIAHTGTKEFNFLKCSVPLHSN---EDM 779

Query: 784 SCEKSEPLLM---SDKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 840
            C  S   L+     +   +  E    QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN
Sbjct: 780 VCSVSPGALIPPHGGEDLTSHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNN 839

Query: 841 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
           QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN
Sbjct: 840 QFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 899

Query: 901 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  917 bits (2370), Expect = 0.0
 Identities = 507/947 (53%), Positives = 639/947 (67%), Gaps = 47/947 (4%)

Query: 7   GWGCGEL-------LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQEL 59
           G G GEL       +L   LL   C     QIRY +PEE+ KGS VGN+A DLG   QEL
Sbjct: 2   GSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQEL 61

Query: 60  AERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGV 119
             R +R+ S      F ++  SG L+ + R+DREE+C + P C + F  + EN +  Y V
Sbjct: 62  PTRKLRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHV 119

Query: 120 EVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFS 179
            VEI DIND+ P+F     +++++E+A  GTR +L  A DAD+G N+L++YQLS + HFS
Sbjct: 120 NVEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFS 179

Query: 180 LDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNA 239
           L     +DG KYPE+VL+ PLDREK+  + L LTALD G P LS T  I V V DANDNA
Sbjct: 180 LINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNA 239

Query: 240 PLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLG 299
           P+F+   Y VS+ EN+  GT +L +TATD DEG+N ++T+SF +E  +I++ F L+SN G
Sbjct: 240 PVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAEITFSF-SEASQITQ-FDLNSNTG 297

Query: 300 EISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISED 359
           EI+ L +LD+EE + Y + + A+DGG ++A   V V V D NDNAPEVI  SL + I ED
Sbjct: 298 EITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMED 357

Query: 360 CLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYN 419
              GT IAL  V D DS  NGE+ C +  ++PFK+  S  N Y L+T   LDRE+  +YN
Sbjct: 358 AELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYN 417

Query: 420 ITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDP 479
           IT+T  D G PPLS+ S I L + DVNDN P F Q+SY   V ENNP G SI  V A DP
Sbjct: 418 ITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDP 477

Query: 480 DSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGN 539
           D G N +V+Y +     +   LSSYVSI++++GV++A R+FD+EQLR  +L + A D G+
Sbjct: 478 DLGPNGQVSYCIMASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGS 537

Query: 540 PPLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 599
           P LS+NVSL + V D+NDN P +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG
Sbjct: 538 PALSANVSLRVLVDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSG 597

Query: 600 QNAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFT 659
            NAWLSY +L+ASEPGLF++GL TGEVRTARAL DRDA++Q L+VAV D GQPPLSAT T
Sbjct: 598 HNAWLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATAT 657

Query: 660 VTVAVADRIPDILADLGSIKTPIDPEDL--DLTLYLVVAVAAVSCVFLAFVIVLLVLRLR 717
           + +  AD + ++L D   I    DP DL  +L  YLVVA+A +S +FL  +I+ + LRLR
Sbjct: 658 LHLVFADSLQEVLPD---ITDRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLR 714

Query: 718 R---------WHKSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHL 768
           R         +     +++E    + VP ++  G          YS+ + + A + K+  
Sbjct: 715 RSSSPASWSCFQPGLCVKSE----SVVPPNYSEGT-------LPYSYNLCV-AHTGKTEF 762

Query: 769 IF----PQPNYADTLLSEESCEKSEPLLMSDKVDANKEERRVQQAPPNTDWRFSQAQRPG 824
            F     Q +    +L  +S     PL  S ++ ++      QQAPPNTDWRFSQAQRPG
Sbjct: 763 NFLKCSEQLSSGQDILCGDSSGALFPLCNSSELTSH------QQAPPNTDWRFSQAQRPG 816

Query: 825 TSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTL 884
           TSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTL
Sbjct: 817 TSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTL 876

Query: 885 QHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
           QHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 877 QHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 923


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,358,050
Number of Sequences: 37866
Number of extensions: 1689299
Number of successful extensions: 10646
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3384
Number of HSP's gapped (non-prelim): 682
length of query: 931
length of database: 18,247,518
effective HSP length: 112
effective length of query: 819
effective length of database: 14,006,526
effective search space: 11471344794
effective search space used: 11471344794
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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