Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 11037063
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11037063 pellino protein [Homo sapiens]
(418 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11037063 pellino protein [Homo sapiens] 880 0.0
gi|10864063 pellino 2 [Homo sapiens] 742 0.0
gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens] 631 0.0
gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens] 617 e-177
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 31 1.8
gi|169165669 PREDICTED: similar to high-mobility group nucleosom... 31 1.8
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 31 1.8
gi|113415254 PREDICTED: similar to high-mobility group nucleosom... 31 1.8
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 31 1.8
gi|113414676 PREDICTED: similar to high-mobility group nucleosom... 31 1.8
gi|118442828 beta-tubulin cofactor E [Homo sapiens] 30 3.1
gi|4507375 beta-tubulin cofactor E [Homo sapiens] 30 3.1
gi|7661566 integrator complex subunit 7 [Homo sapiens] 30 3.1
gi|152963637 zinc finger protein 787 [Homo sapiens] 30 3.1
gi|150170670 piccolo isoform 2 [Homo sapiens] 30 4.1
gi|150378539 piccolo isoform 1 [Homo sapiens] 30 4.1
gi|33350928 disabled homolog 1 [Homo sapiens] 29 9.1
>gi|11037063 pellino protein [Homo sapiens]
Length = 418
Score = 880 bits (2273), Expect = 0.0
Identities = 418/418 (100%), Positives = 418/418 (100%)
Query: 1 MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIA 60
MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIA
Sbjct: 1 MFSPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIA 60
Query: 61 CTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPG 120
CTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPG
Sbjct: 61 CTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPG 120
Query: 121 SQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQM 180
SQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQM
Sbjct: 121 SQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQM 180
Query: 181 DGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQD 240
DGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQD
Sbjct: 181 DGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQD 240
Query: 241 GSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKDVV 300
GSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKDVV
Sbjct: 241 GSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKDVV 300
Query: 301 DEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPP 360
DEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPP
Sbjct: 301 DEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPP 360
Query: 361 THAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD 418
THAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD
Sbjct: 361 THAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD 418
>gi|10864063 pellino 2 [Homo sapiens]
Length = 420
Score = 742 bits (1915), Expect = 0.0
Identities = 342/420 (81%), Positives = 380/420 (90%), Gaps = 2/420 (0%)
Query: 1 MFSPDQENH--PSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVH 58
MFSP QE H P+K PVKYGEL+VLGYNG+LPNGDRGRRKSRFAL+KRPKANGVKPSTVH
Sbjct: 1 MFSPGQEEHCAPNKEPVKYGELVVLGYNGALPNGDRGRRKSRFALYKRPKANGVKPSTVH 60
Query: 59 IACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTV 118
+ TPQA+KAIS K QHSISYTLSR QTVVVEYTHD +TDMFQ+GRSTESPIDFVVTDT+
Sbjct: 61 VISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQVGRSTESPIDFVVTDTI 120
Query: 119 PGSQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDG 178
GSQ+ + Q QSTISRFACRI+C+RN P+TARI+AAGFDSSKNIFLGEKAAKWK DG
Sbjct: 121 SGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAAGFDSSKNIFLGEKAAKWKNPDG 180
Query: 179 QMDGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQL 238
MDGLTTNGVLVMHPR GFTE+S+PG+WREISVCG+V++LRETRSAQQRGK+VE ETN L
Sbjct: 181 HMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVYTLRETRSAQQRGKLVESETNVL 240
Query: 239 QDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKRKD 298
QDGSLIDLCGATLLWRTA+GL HTPT KH+EALRQEINAARPQCPVG NTLAFPS+ RK+
Sbjct: 241 QDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEINAARPQCPVGLNTLAFPSINRKE 300
Query: 299 VVDEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAG 358
VV+EKQPW YL+CGHVHGYHNWG++ + + +RECPMCR+VGPYVPLWLGCEAGFYVDAG
Sbjct: 301 VVEEKQPWAYLSCGHVHGYHNWGHRSDTEANERECPMCRTVGPYVPLWLGCEAGFYVDAG 360
Query: 359 PPTHAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD 418
PPTHAF+PCGHVCSEK+ YWSQIPLPHGTH FHAACPFCA QL GEQ I+LIFQGP+D
Sbjct: 361 PPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAACPFCATQLVGEQNCIKLIFQGPID 420
>gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens]
Length = 445
Score = 631 bits (1627), Expect = 0.0
Identities = 294/417 (70%), Positives = 344/417 (82%), Gaps = 2/417 (0%)
Query: 3 SPDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACT 62
SP ++ P + P+KYGELIVLGYNG L +GD+GRR+SR AL +R ANGVKP +H T
Sbjct: 30 SPGEDAQPGEEPIKYGELIVLGYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHIST 89
Query: 63 PQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTESPIDFVVTDTVPGSQ 122
P +KA+SN+ QHSISYTLSR+ +V+VEYTHDS+TDMFQIGRSTE+ IDFVVTDT PG
Sbjct: 90 PLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGG 149
Query: 123 SNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDSSKNIFLGEKAAKWKTSDGQMDG 182
+ ++ S QSTISR+ACRI+C+R PP+TARIYAAGFD+S NIFLGE+AAKW+T DG MDG
Sbjct: 150 A-AEGPSAQSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDG 208
Query: 183 LTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQDGS 242
LTTNGVLVMHP GF+EDS PG+WREISVCGNV++LR++RSAQQRGK+VE E+N LQDGS
Sbjct: 209 LTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGS 268
Query: 243 LIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAARPQCPVGFNTLAFPSMKR-KDVVD 301
LIDLCGATLLWRT GL PT+K LEA RQE NAARPQCPVG +TLAFPS R + D
Sbjct: 269 LIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPD 328
Query: 302 EKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCRSVGPYVPLWLGCEAGFYVDAGPPT 361
++QPWVY+ CGHVHGYH WG + ER ++RECP+CR VGPYVPLWLG EAG +D GPP+
Sbjct: 329 KQQPWVYVRCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPS 388
Query: 362 HAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPFCAHQLAGEQGYIRLIFQGPLD 418
HAF+PCGHVCSEKT YW+Q PLPHGTH FHAACPFC L GE G +RLIFQGPLD
Sbjct: 389 HAFAPCGHVCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD 445
>gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens]
Length = 469
Score = 617 bits (1592), Expect = e-177
Identities = 294/441 (66%), Positives = 344/441 (78%), Gaps = 26/441 (5%)
Query: 3 SPDQENHPSKAPVKYGELIVLG------------------------YNGSLPNGDRGRRK 38
SP ++ P + P+KYGELIVLG YNG L +GD+GRR+
Sbjct: 30 SPGEDAQPGEEPIKYGELIVLGCCEEGGEETEAQRGEVTGPRAHSCYNGCLASGDKGRRR 89
Query: 39 SRFALFKRPKANGVKPSTVHIACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTD 98
SR AL +R ANGVKP +H TP +KA+SN+ QHSISYTLSR+ +V+VEYTHDS+TD
Sbjct: 90 SRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSDTD 149
Query: 99 MFQIGRSTESPIDFVVTDTVPGSQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGF 158
MFQIGRSTE+ IDFVVTDT PG + ++ S QSTISR+ACRI+C+R PP+TARIYAAGF
Sbjct: 150 MFQIGRSTENMIDFVVTDTSPGGGA-AEGPSAQSTISRYACRILCDRRPPYTARIYAAGF 208
Query: 159 DSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSL 218
D+S NIFLGE+AAKW+T DG MDGLTTNGVLVMHP GF+EDS PG+WREISVCGNV++L
Sbjct: 209 DASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTL 268
Query: 219 RETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAA 278
R++RSAQQRGK+VE E+N LQDGSLIDLCGATLLWRT GL PT+K LEA RQE NAA
Sbjct: 269 RDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAA 328
Query: 279 RPQCPVGFNTLAFPSMKR-KDVVDEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCR 337
RPQCPVG +TLAFPS R + D++QPWVY+ CGHVHGYH WG + ER ++RECP+CR
Sbjct: 329 RPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPLCR 388
Query: 338 SVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPF 397
VGPYVPLWLG EAG +D GPP+HAF+PCGHVCSEKT YW+Q PLPHGTH FHAACPF
Sbjct: 389 LVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHAACPF 448
Query: 398 CAHQLAGEQGYIRLIFQGPLD 418
C L GE G +RLIFQGPLD
Sbjct: 449 CGAWLTGEHGCVRLIFQGPLD 469
>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 31.2 bits (69), Expect = 1.8
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 180 MDGLTTNGVLVMHPRN------GFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMV-- 231
MD L +L +HP G S G W E+ LRE S G++
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 232 -EIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEIN 276
E E+ LQD L L G L + L T T + A+ + ++
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLD 106
>gi|169165669 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 16/70 (22%)
Query: 4 PDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACTP 63
P E P KAP K GE + G G G+ G P NGV A T
Sbjct: 35 PKPEPKPKKAPAKKGEKVPKGKKGKADAGEEG---------NNPAENGV-------AKTD 78
Query: 64 QAAKAISNKD 73
QA KA S D
Sbjct: 79 QAQKAESPGD 88
>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 31.2 bits (69), Expect = 1.8
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 180 MDGLTTNGVLVMHPRN------GFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMV-- 231
MD L +L +HP G S G W E+ LRE S G++
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 232 -EIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEIN 276
E E+ LQD L L G L + L T T + A+ + ++
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLD 106
>gi|113415254 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 16/70 (22%)
Query: 4 PDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACTP 63
P E P KAP K GE + G G G+ G P NGV A T
Sbjct: 35 PKPEPKPKKAPAKKGEKVPKGKKGKADAGEEG---------NNPAENGV-------AKTD 78
Query: 64 QAAKAISNKD 73
QA KA S D
Sbjct: 79 QAQKAESPGD 88
>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
sapiens]
Length = 622
Score = 31.2 bits (69), Expect = 1.8
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 180 MDGLTTNGVLVMHPRN------GFTEDSKPGIWREISVCGNVFSLRETRSAQQRGKMV-- 231
MD L +L +HP G S G W E+ LRE S G++
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 232 -EIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEIN 276
E E+ LQD L L G L + L T T + A+ + ++
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAAVCRRLD 106
>gi|113414676 PREDICTED: similar to high-mobility group
nucleosomal binding domain 2 [Homo sapiens]
Length = 90
Score = 31.2 bits (69), Expect = 1.8
Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 16/70 (22%)
Query: 4 PDQENHPSKAPVKYGELIVLGYNGSLPNGDRGRRKSRFALFKRPKANGVKPSTVHIACTP 63
P E P KAP K GE + G G G+ G P NGV A T
Sbjct: 35 PKPEPKPKKAPAKKGEKVPKGKKGKADAGEEG---------NNPAENGV-------AKTD 78
Query: 64 QAAKAISNKD 73
QA KA S D
Sbjct: 79 QAQKAESPGD 88
>gi|118442828 beta-tubulin cofactor E [Homo sapiens]
Length = 527
Score = 30.4 bits (67), Expect = 3.1
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 203 PGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTAEGLSHT 262
PG+ N+F Q K++++ +NQL D + + L ++H
Sbjct: 229 PGLEELYLESNNIFISERPTDVLQTVKLLDLSSNQLIDENQLYL------------IAHL 276
Query: 263 PTVKHLEALRQEINAAR-PQCPVGFNTLAFPSMKRKDVVDEK-QPWVYLN 310
P ++ L I++ P +G T FPS+K V D + W + N
Sbjct: 277 PRLEQLILSDTGISSLHFPDAGIGCKTSMFPSLKYLVVNDNQISQWSFFN 326
>gi|4507375 beta-tubulin cofactor E [Homo sapiens]
Length = 527
Score = 30.4 bits (67), Expect = 3.1
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 14/110 (12%)
Query: 203 PGIWREISVCGNVFSLRETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTAEGLSHT 262
PG+ N+F Q K++++ +NQL D + + L ++H
Sbjct: 229 PGLEELYLESNNIFISERPTDVLQTVKLLDLSSNQLIDENQLYL------------IAHL 276
Query: 263 PTVKHLEALRQEINAAR-PQCPVGFNTLAFPSMKRKDVVDEK-QPWVYLN 310
P ++ L I++ P +G T FPS+K V D + W + N
Sbjct: 277 PRLEQLILSDTGISSLHFPDAGIGCKTSMFPSLKYLVVNDNQISQWSFFN 326
>gi|7661566 integrator complex subunit 7 [Homo sapiens]
Length = 962
Score = 30.4 bits (67), Expect = 3.1
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 201 SKPGIWREI-SVCGNVFSLRETRSAQQRGKMVEIETNQLQ 239
SKPG++R+I SVC NV S +++S Q ++ TN+++
Sbjct: 839 SKPGLFRKIQSVCLNVSSTLQSKSGQDYKIPIDNMTNEME 878
>gi|152963637 zinc finger protein 787 [Homo sapiens]
Length = 382
Score = 30.4 bits (67), Expect = 3.1
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 357 AGPPTHAFSPCGHVCSE--KTTAYWSQIPLPHGTHTFHA--ACPFC 398
AGPP P ++C+E K+ ++WS++ THT AC C
Sbjct: 54 AGPPPRPRPPAPYICNECGKSFSHWSKLTRHQRTHTGERPNACADC 99
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 30.0 bits (66), Expect = 4.1
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 18/157 (11%)
Query: 38 KSRFALFKRPKANGVKPSTVHIA-------CTPQAAKAI--SNKDQHSISYTLSRAQTVV 88
+S F +++P + + P V +P+ AK + S D +S T +
Sbjct: 3637 ESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKPLSPTADESSRAP 3696
Query: 89 VEYTHDSNTDMFQIGRSTESPIDFVVTDTVPG---SQSNSDTQSVQSTISRFACRIICER 145
+YT T Q T S V T+P + ++ TQS ST+ + R IC
Sbjct: 3697 FQYTEGYTTKGSQT--MTSSGAQKKVKRTLPNPPPEEISTGTQSTFSTMGTVSRRRICRT 3754
Query: 146 NPPFTARIYAAGFDSSKNIFLGEK-AAKWKTSDGQMD 181
N A+I D + + L E+ +AK + ++D
Sbjct: 3755 NTMARAKILQ---DIDRELDLVERESAKLRKKQAELD 3788
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 30.0 bits (66), Expect = 4.1
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 18/157 (11%)
Query: 38 KSRFALFKRPKANGVKPSTVHIA-------CTPQAAKAI--SNKDQHSISYTLSRAQTVV 88
+S F +++P + + P V +P+ AK + S D +S T +
Sbjct: 3637 ESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKTAKMMQRSMSDPKPLSPTADESSRAP 3696
Query: 89 VEYTHDSNTDMFQIGRSTESPIDFVVTDTVPG---SQSNSDTQSVQSTISRFACRIICER 145
+YT T Q T S V T+P + ++ TQS ST+ + R IC
Sbjct: 3697 FQYTEGYTTKGSQT--MTSSGAQKKVKRTLPNPPPEEISTGTQSTFSTMGTVSRRRICRT 3754
Query: 146 NPPFTARIYAAGFDSSKNIFLGEK-AAKWKTSDGQMD 181
N A+I D + + L E+ +AK + ++D
Sbjct: 3755 NTMARAKILQ---DIDRELDLVERESAKLRKKQAELD 3788
>gi|33350928 disabled homolog 1 [Homo sapiens]
Length = 555
Score = 28.9 bits (63), Expect = 9.1
Identities = 43/172 (25%), Positives = 61/172 (35%), Gaps = 35/172 (20%)
Query: 2 FSPDQENHPSKAPVKYGELIVLGY-------NGSLPNGDRGRRK------SRFALFKRPK 48
F P Q P A + G L L S P D+ R+K F + + P
Sbjct: 366 FMPTQTVMPLPAAMFQGPLTPLATVPGTSDSTRSSPQTDKPRQKMGKETFKDFQMAQPPP 425
Query: 49 ANGVKPSTVHIACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTDMFQIGRSTES 108
KP + CT +A + NK V + T D D F I + +
Sbjct: 426 VPSRKPDQPSLTCTSEAFSSYFNK-------------VGVAQDTDD--CDDFDISQLNLT 470
Query: 109 PIDFVVTDTVPGSQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGFDS 160
P VT T P + S QS+ S+ + + P T I+ GF+S
Sbjct: 471 P----VTSTTPSTNSPPTPAPRQSSPSKSSA---SHASDPTTDDIFEEGFES 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,899,472
Number of Sequences: 37866
Number of extensions: 826818
Number of successful extensions: 1625
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1611
Number of HSP's gapped (non-prelim): 19
length of query: 418
length of database: 18,247,518
effective HSP length: 105
effective length of query: 313
effective length of database: 14,271,588
effective search space: 4467007044
effective search space used: 4467007044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.