Search of human proteins with 156564403

Search of human proteins with 156564403

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156564403 pyruvate dehydrogenase (lipoamide) beta [Homo
sapiens]
         (359 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156564403 pyruvate dehydrogenase (lipoamide) beta [Homo sapiens]   723   0.0  
gi|4557353 branched chain keto acid dehydrogenase E1 beta precur...   183   2e-46
gi|34101272 branched chain keto acid dehydrogenase E1 beta precu...   183   2e-46
gi|225637463 transketolase-like 1 isoform c [Homo sapiens]             60   2e-09
gi|225637461 transketolase-like 1 isoform b [Homo sapiens]             60   2e-09
gi|225637459 transketolase-like 1 isoform a [Homo sapiens]             60   2e-09
gi|133778974 transketolase-like 2 [Homo sapiens]                       58   1e-08
gi|205277465 transketolase isoform 2 [Homo sapiens]                    51   1e-06
gi|205277463 transketolase isoform 1 [Homo sapiens]                    51   1e-06
gi|4507521 transketolase isoform 1 [Homo sapiens]                      51   1e-06
gi|50659080 serpin peptidase inhibitor, clade A, member 3 precur...    30   2.6  
gi|148612818 protein kinase, cGMP-dependent, type I isoform 1 [H...    30   4.4  
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]                   29   7.5  
gi|119220554 serine palmitoyltransferase, long chain base subuni...    28   9.7  

>gi|156564403 pyruvate dehydrogenase (lipoamide) beta [Homo sapiens]
          Length = 359

 Score =  723 bits (1866), Expect = 0.0
 Identities = 359/359 (100%), Positives = 359/359 (100%)

Query: 1   MAAVSGLVRRPLREVSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEV 60
           MAAVSGLVRRPLREVSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEV
Sbjct: 1   MAAVSGLVRRPLREVSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEV 60

Query: 61  AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI 120
           AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI
Sbjct: 61  AQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAI 120

Query: 121 DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS 180
           DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS
Sbjct: 121 DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS 180

Query: 181 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV 240
           EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV
Sbjct: 181 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVV 240

Query: 241 SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG 300
           SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG
Sbjct: 241 SHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFG 300

Query: 301 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI 359
           VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI
Sbjct: 301 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI 359


>gi|4557353 branched chain keto acid dehydrogenase E1 beta precursor
           [Homo sapiens]
          Length = 392

 Score =  183 bits (464), Expect = 2e-46
 Identities = 114/324 (35%), Positives = 172/324 (53%), Gaps = 11/324 (3%)

Query: 38  AINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAV 97
           ++   +D  L +D    + GE+VA + G ++ + GL  KYG  R+ +TP+ E G  G  +
Sbjct: 76  SVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGI 134

Query: 98  GAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGL-QPVPIVFRGPNGASAGVAA 156
           G A+ G   I E    ++   A DQ++N AAK  Y SG L     +  R P G     A 
Sbjct: 135 GIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGAL 194

Query: 157 QHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEA 216
            HSQ   A++ HCPG+KVV P +   AKGL+ S I D NP +  E +++Y    E   E 
Sbjct: 195 YHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EV 251

Query: 217 QSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPM 274
             + + IP+ +A++ ++G+ +T+V+    V H +   A ++KE  GV CEVI++RTI P 
Sbjct: 252 PIEPYNIPLSQAEVIQEGSDVTLVAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPW 310

Query: 275 DMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPY 334
           D++TI  SV+KT  L+         G  +EI + + E   F  L+AP  RV G D P P+
Sbjct: 311 DVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQE-ECFLNLEAPISRVCGYDTPFPH 369

Query: 335 AKILEDNSIPQVKDIIFAIKKTLN 358
             I E   IP       A++K +N
Sbjct: 370 --IFEPFYIPDKWKCYDALRKMIN 391


>gi|34101272 branched chain keto acid dehydrogenase E1 beta
           precursor [Homo sapiens]
          Length = 392

 Score =  183 bits (464), Expect = 2e-46
 Identities = 114/324 (35%), Positives = 172/324 (53%), Gaps = 11/324 (3%)

Query: 38  AINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAV 97
           ++   +D  L +D    + GE+VA + G ++ + GL  KYG  R+ +TP+ E G  G  +
Sbjct: 76  SVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGI 134

Query: 98  GAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGL-QPVPIVFRGPNGASAGVAA 156
           G A+ G   I E    ++   A DQ++N AAK  Y SG L     +  R P G     A 
Sbjct: 135 GIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGAL 194

Query: 157 QHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEA 216
            HSQ   A++ HCPG+KVV P +   AKGL+ S I D NP +  E +++Y    E   E 
Sbjct: 195 YHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAE---EV 251

Query: 217 QSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKE--GVECEVINMRTIRPM 274
             + + IP+ +A++ ++G+ +T+V+    V H +   A ++KE  GV CEVI++RTI P 
Sbjct: 252 PIEPYNIPLSQAEVIQEGSDVTLVAWGTQV-HVIREVASMAKEKLGVSCEVIDLRTIIPW 310

Query: 275 DMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPY 334
           D++TI  SV+KT  L+         G  +EI + + E   F  L+AP  RV G D P P+
Sbjct: 311 DVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQE-ECFLNLEAPISRVCGYDTPFPH 369

Query: 335 AKILEDNSIPQVKDIIFAIKKTLN 358
             I E   IP       A++K +N
Sbjct: 370 --IFEPFYIPDKWKCYDALRKMIN 391


>gi|225637463 transketolase-like 1 isoform c [Homo sapiens]
          Length = 540

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 82/306 (26%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 64  DGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFN-FSMQAIDQ 122
           D  Y     ++ K   +R I+  ++E     +A+G A  G R I    TF  F  +A D 
Sbjct: 259 DTRYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRG-RTIAFASTFAAFLTRAFDH 317

Query: 123 VINSAAKTYYMSGGLQPVPIVFRGPN-GASAGV--AAQHSQCFAAWYGHCPGLKVVSPWN 179
           +           GGL    I   G + G S G   A+Q +    A +   P   +  P +
Sbjct: 318 I---------RIGGLAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIFYPTD 368

Query: 180 S---EDAKGLIKSA-----IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIE 231
           +   E A  L  +A     IR   P    E  ++Y     F            IG+AK+ 
Sbjct: 369 AVSTEHAVALAANAKGMCFIRTTRP----ETMVIYTPQERFE-----------IGQAKVL 413

Query: 232 RQ--GTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NH 288
           R      +TV+     V   L AA  LSK+ +   VI++ TI+P+D+ TI +S   T   
Sbjct: 414 RHCVSDKVTVIGAGITVYEALAAADELSKQDIFIRVIDLFTIKPLDVATIVSSAKATEGR 473

Query: 289 LVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKD 348
           ++TVE  +PQ G+G  +CA +   P    +   ++ V+G        ++L+   I   + 
Sbjct: 474 IITVEDHYPQGGIGEAVCAAVSMDPD---IQVHSLAVSGVPQSGKSEELLDMYGI-SARH 529

Query: 349 IIFAIK 354
           II A+K
Sbjct: 530 IIVAVK 535


>gi|225637461 transketolase-like 1 isoform b [Homo sapiens]
          Length = 590

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 82/306 (26%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 64  DGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFN-FSMQAIDQ 122
           D  Y     ++ K   +R I+  ++E     +A+G A  G R I    TF  F  +A D 
Sbjct: 309 DTRYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRG-RTIAFASTFAAFLTRAFDH 367

Query: 123 VINSAAKTYYMSGGLQPVPIVFRGPN-GASAGV--AAQHSQCFAAWYGHCPGLKVVSPWN 179
           +           GGL    I   G + G S G   A+Q +    A +   P   +  P +
Sbjct: 368 I---------RIGGLAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIFYPTD 418

Query: 180 S---EDAKGLIKSA-----IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIE 231
           +   E A  L  +A     IR   P    E  ++Y     F            IG+AK+ 
Sbjct: 419 AVSTEHAVALAANAKGMCFIRTTRP----ETMVIYTPQERFE-----------IGQAKVL 463

Query: 232 RQ--GTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NH 288
           R      +TV+     V   L AA  LSK+ +   VI++ TI+P+D+ TI +S   T   
Sbjct: 464 RHCVSDKVTVIGAGITVYEALAAADELSKQDIFIRVIDLFTIKPLDVATIVSSAKATEGR 523

Query: 289 LVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKD 348
           ++TVE  +PQ G+G  +CA +   P    +   ++ V+G        ++L+   I   + 
Sbjct: 524 IITVEDHYPQGGIGEAVCAAVSMDPD---IQVHSLAVSGVPQSGKSEELLDMYGI-SARH 579

Query: 349 IIFAIK 354
           II A+K
Sbjct: 580 IIVAVK 585


>gi|225637459 transketolase-like 1 isoform a [Homo sapiens]
          Length = 596

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 82/306 (26%), Positives = 129/306 (42%), Gaps = 44/306 (14%)

Query: 64  DGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFN-FSMQAIDQ 122
           D  Y     ++ K   +R I+  ++E     +A+G A  G R I    TF  F  +A D 
Sbjct: 315 DTRYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRG-RTIAFASTFAAFLTRAFDH 373

Query: 123 VINSAAKTYYMSGGLQPVPIVFRGPN-GASAGV--AAQHSQCFAAWYGHCPGLKVVSPWN 179
           +           GGL    I   G + G S G   A+Q +    A +   P   +  P +
Sbjct: 374 I---------RIGGLAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIFYPTD 424

Query: 180 S---EDAKGLIKSA-----IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIE 231
           +   E A  L  +A     IR   P    E  ++Y     F            IG+AK+ 
Sbjct: 425 AVSTEHAVALAANAKGMCFIRTTRP----ETMVIYTPQERFE-----------IGQAKVL 469

Query: 232 RQ--GTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NH 288
           R      +TV+     V   L AA  LSK+ +   VI++ TI+P+D+ TI +S   T   
Sbjct: 470 RHCVSDKVTVIGAGITVYEALAAADELSKQDIFIRVIDLFTIKPLDVATIVSSAKATEGR 529

Query: 289 LVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKD 348
           ++TVE  +PQ G+G  +CA +   P    +   ++ V+G        ++L+   I   + 
Sbjct: 530 IITVEDHYPQGGIGEAVCAAVSMDPD---IQVHSLAVSGVPQSGKSEELLDMYGI-SARH 585

Query: 349 IIFAIK 354
           II A+K
Sbjct: 586 IIVAVK 591


>gi|133778974 transketolase-like 2 [Homo sapiens]
          Length = 626

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 22/247 (8%)

Query: 73  LWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYY 132
           +++K   +R I+  I+E     +A+G A  G           F  +A DQ+         
Sbjct: 354 IFRKEHPERFIECIIAEQNMVSVALGCATRGRTIAFAGAFAAFFTRAFDQL--------- 404

Query: 133 MSGGLQPVPIVFRGPN-GASAGV--AAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKS 189
             G +    I   G + G S G    +Q +    A +   P   V  P ++   +  I  
Sbjct: 405 RMGAISQANINLIGSHCGVSTGEDGVSQMALEDLAMFRSIPNCTVFYPSDAISTEHAIYL 464

Query: 190 AIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTH--ITVVSHSRPVG 247
           A        +  ++    V +  P E         IG+AK+ R G +  +TV+     + 
Sbjct: 465 AANTKGMCFIRTSQPETAVIYT-PQEN------FEIGQAKVVRHGVNDKVTVIGAGVTLH 517

Query: 248 HCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NHLVTVEGGWPQFGVGAEIC 306
             LEAA  LS++G+   VI+  TI+P+D  TI +S   T   ++TVE  + + G+G  +C
Sbjct: 518 EALEAADHLSQQGISVRVIDPFTIKPLDAATIISSAKATGGRVITVEDHYREGGIGEAVC 577

Query: 307 ARIMEGP 313
           A +   P
Sbjct: 578 AAVSREP 584


>gi|205277465 transketolase isoform 2 [Homo sapiens]
          Length = 540

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 34/277 (12%)

Query: 73  LWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLR-PICEFMTFNFSMQAIDQVINSAAK-- 129
           ++KK    R I+  I+E     IAVG A      P C      F+ +A DQ+  +A    
Sbjct: 267 IFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFT-RAFDQIRMAAISES 325

Query: 130 TYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKS 189
              + G    V I   GP+        Q +    A +   P   V  P +    +  ++ 
Sbjct: 326 NINLCGSHCGVSIGEDGPS--------QMALEDLAMFRSVPTSTVFYPSDGVATEKAVEL 377

Query: 190 A--------IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVS 241
           A        IR + P    EN ++Y           ++DF +   K  ++ +   +TV+ 
Sbjct: 378 AANTKGICFIRTSRP----ENAIIYN---------NNEDFQVGQAKVVLKSKDDQVTVIG 424

Query: 242 HSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NHLVTVEGGWPQFG 300
               +   L AA +L KE +   V++  TI+P+D + I  S   T   ++TVE  + + G
Sbjct: 425 AGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGG 484

Query: 301 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKI 337
           +G  + + ++  P          RV  +  P    K+
Sbjct: 485 IGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAELLKM 521


>gi|205277463 transketolase isoform 1 [Homo sapiens]
          Length = 623

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 34/277 (12%)

Query: 73  LWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLR-PICEFMTFNFSMQAIDQVINSAAK-- 129
           ++KK    R I+  I+E     IAVG A      P C      F+ +A DQ+  +A    
Sbjct: 350 IFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFT-RAFDQIRMAAISES 408

Query: 130 TYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKS 189
              + G    V I   GP+        Q +    A +   P   V  P +    +  ++ 
Sbjct: 409 NINLCGSHCGVSIGEDGPS--------QMALEDLAMFRSVPTSTVFYPSDGVATEKAVEL 460

Query: 190 A--------IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVS 241
           A        IR + P    EN ++Y           ++DF +   K  ++ +   +TV+ 
Sbjct: 461 AANTKGICFIRTSRP----ENAIIYN---------NNEDFQVGQAKVVLKSKDDQVTVIG 507

Query: 242 HSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NHLVTVEGGWPQFG 300
               +   L AA +L KE +   V++  TI+P+D + I  S   T   ++TVE  + + G
Sbjct: 508 AGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGG 567

Query: 301 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKI 337
           +G  + + ++  P          RV  +  P    K+
Sbjct: 568 IGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAELLKM 604


>gi|4507521 transketolase isoform 1 [Homo sapiens]
          Length = 623

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 34/277 (12%)

Query: 73  LWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLR-PICEFMTFNFSMQAIDQVINSAAK-- 129
           ++KK    R I+  I+E     IAVG A      P C      F+ +A DQ+  +A    
Sbjct: 350 IFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFT-RAFDQIRMAAISES 408

Query: 130 TYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKS 189
              + G    V I   GP+        Q +    A +   P   V  P +    +  ++ 
Sbjct: 409 NINLCGSHCGVSIGEDGPS--------QMALEDLAMFRSVPTSTVFYPSDGVATEKAVEL 460

Query: 190 A--------IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVS 241
           A        IR + P    EN ++Y           ++DF +   K  ++ +   +TV+ 
Sbjct: 461 AANTKGICFIRTSRP----ENAIIYN---------NNEDFQVGQAKVVLKSKDDQVTVIG 507

Query: 242 HSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKT-NHLVTVEGGWPQFG 300
               +   L AA +L KE +   V++  TI+P+D + I  S   T   ++TVE  + + G
Sbjct: 508 AGVTLHEALAAAELLKKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGG 567

Query: 301 VGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKI 337
           +G  + + ++  P          RV  +  P    K+
Sbjct: 568 IGEAVSSAVVGEPGITVTHLAVNRVPRSGKPAELLKM 604


>gi|50659080 serpin peptidase inhibitor, clade A, member 3 precursor
           [Homo sapiens]
          Length = 423

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 22/181 (12%)

Query: 56  LGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPIS-EMGFAGIAVGAAMAGLRPICEFMTFN 114
           LG   A  D A+ + + L  K  DK +I +P+S     A +++GA    L  I + + FN
Sbjct: 47  LGLASANVDFAFSLYKQLVLKAPDKNVIFSPLSISTALAFLSLGAHNTTLTEILKGLKFN 106

Query: 115 F----------SMQAIDQVINSAAKTYYMSGG-----LQPVPIVFRGPNGASAGVAAQHS 159
                      S Q + + +N ++    +S G      + + ++ R    A        S
Sbjct: 107 LTETSEAEIHQSFQHLLRTLNQSSDELQLSMGNAMFVKEQLSLLDRFTEDAK---RLYGS 163

Query: 160 QCFAA-WYGHCPGLKVVSPWNSEDAKGLIKSAIR--DNNPVVVLENELMYGVPFEFPPEA 216
           + FA  +       K+++ +     +G I   I+  D+  ++VL N + +   +E P + 
Sbjct: 164 EAFATDFQDSAAAKKLINDYVKNGTRGKITDLIKDLDSQTMMVLVNYIFFKAKWEMPFDP 223

Query: 217 Q 217
           Q
Sbjct: 224 Q 224


>gi|148612818 protein kinase, cGMP-dependent, type I isoform 1 [Homo
           sapiens]
          Length = 671

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 21/177 (11%)

Query: 121 DQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNS 180
           ++ I    +  +    + PVP    GP    A   +   Q + +++      +  +   S
Sbjct: 30  EEEIQELKRKLHKCQSVLPVPSTHIGPRTTRAQGISAEPQTYRSFHDLRQAFRKFT--KS 87

Query: 181 EDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKD-------------FLIPIGK 227
           E +K LIK AI DN+ +  LE   +  +     P    KD             +++  GK
Sbjct: 88  ERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGK 147

Query: 228 AKIERQGTHITVVSHSRPVG------HCLEAAAVLSKEGVECEVINMRTIRPMDMET 278
            ++ ++G  +  +   +  G      +C   A V +   V+   I+ +  + + M T
Sbjct: 148 VEVTKEGVKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRT 204


>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
          Length = 1318

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 304 EICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIP 344
           +IC R  +   +  L+APA RV GA V +P      D++ P
Sbjct: 369 DICLRKRQSQRWGGLEAPAARVGGAKVAVPTGPTPLDSTPP 409


>gi|119220554 serine palmitoyltransferase, long chain base subunit 3
           [Homo sapiens]
          Length = 552

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 15  VSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGA---YKVSR 71
           +SG   R F      +L+  +RDA+  G        +K+ +L E V   +G+        
Sbjct: 264 LSGATIRIFKHNNTQSLEKLLRDAVIYGQPRTRRAWKKILILVEGVYSMEGSIVHLPQII 323

Query: 72  GLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTY 131
            L KKY     ID   S        +GA     R + EF  F      +D ++ +  K++
Sbjct: 324 ALKKKYKAYLYIDEAHS--------IGAVGPTGRGVTEF--FGLDPHEVDVLMGTFTKSF 373

Query: 132 YMSGG 136
             SGG
Sbjct: 374 GASGG 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,381,651
Number of Sequences: 37866
Number of extensions: 599350
Number of successful extensions: 1236
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1212
Number of HSP's gapped (non-prelim): 17
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.