Guide to the Human Genome
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Search of human proteins with 156447037

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156447037 aquaporin 12B [Homo sapiens]
         (307 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156447037 aquaporin 12B [Homo sapiens]                             617   e-177
gi|40538880 aquaporin 12A [Homo sapiens]                              579   e-166
gi|27370565 aquaporin 11 [Homo sapiens]                               113   2e-25
gi|45446752 aquaporin 8 [Homo sapiens]                                 38   0.013
gi|86792455 aquaporin 6 [Homo sapiens]                                 37   0.022
gi|4502183 aquaporin 5 [Homo sapiens]                                  37   0.029
gi|37694062 aquaporin 1 [Homo sapiens]                                 34   0.19 
gi|4502179 aquaporin 2 [Homo sapiens]                                  33   0.32 
gi|8923887 zinc finger protein 395 [Homo sapiens]                      33   0.41 
gi|4755125 aquaporin 4 isoform b [Homo sapiens]                        32   0.71 
gi|4502181 aquaporin 4 isoform a [Homo sapiens]                        32   0.71 
gi|189217915 syntaxin binding protein 5 (tomosyn) isoform b [Hom...    32   0.71 
gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),...    30   3.5  
gi|124107604 killer cell immunoglobulin-like receptor, two domai...    28   7.8  
gi|124107606 killer cell immunoglobulin-like receptor, two domai...    28   7.8  
gi|124107610 killer cell immunoglobulin-like receptor, two domai...    28   7.8  
gi|189217897 syntaxin binding protein 5 (tomosyn) isoform a [Hom...    28   7.8  
gi|98991769 taspase 1 precursor [Homo sapiens]                         28   7.8  

>gi|156447037 aquaporin 12B [Homo sapiens]
          Length = 307

 Score =  617 bits (1591), Expect = e-177
 Identities = 307/307 (100%), Positives = 307/307 (100%)

Query: 1   MAGLNVSLSFFFATFTLCEAARRASKALLPVGAYEVFAREAVGAVQLGACFLEMRTLVEL 60
           MAGLNVSLSFFFATFTLCEAARRASKALLPVGAYEVFAREAVGAVQLGACFLEMRTLVEL
Sbjct: 1   MAGLNVSLSFFFATFTLCEAARRASKALLPVGAYEVFAREAVGAVQLGACFLEMRTLVEL 60

Query: 61  GPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPGTLLKLAAQGL 120
           GPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPGTLLKLAAQGL
Sbjct: 61  GPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPGTLLKLAAQGL 120

Query: 121 GMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHL 180
           GMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHL
Sbjct: 121 GMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHL 180

Query: 181 RHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPL 240
           RHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPL
Sbjct: 181 RHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPL 240

Query: 241 TGMVLAVLLHQGRLPHLFQRNLFYGQKNKYRAPRGKPAPASGDTQTPAKGSSVREPGRSG 300
           TGMVLAVLLHQGRLPHLFQRNLFYGQKNKYRAPRGKPAPASGDTQTPAKGSSVREPGRSG
Sbjct: 241 TGMVLAVLLHQGRLPHLFQRNLFYGQKNKYRAPRGKPAPASGDTQTPAKGSSVREPGRSG 300

Query: 301 VEGPHSS 307
           VEGPHSS
Sbjct: 301 VEGPHSS 307


>gi|40538880 aquaporin 12A [Homo sapiens]
          Length = 295

 Score =  579 bits (1493), Expect = e-166
 Identities = 292/307 (95%), Positives = 293/307 (95%), Gaps = 12/307 (3%)

Query: 1   MAGLNVSLSFFFATFTLCEAARRASKALLPVGAYEVFAREAVGAVQLGACFLEMRTLVEL 60
           MAGLNVSLSFFFATF LCEAARRASKALLPVGAYEVFAREA            MRTLVEL
Sbjct: 1   MAGLNVSLSFFFATFALCEAARRASKALLPVGAYEVFAREA------------MRTLVEL 48

Query: 61  GPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPGTLLKLAAQGL 120
           GPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAE+SLPGTLLKLAAQGL
Sbjct: 49  GPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEQSLPGTLLKLAAQGL 108

Query: 121 GMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHL 180
           GMQAACTL RLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHL
Sbjct: 109 GMQAACTLMRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHL 168

Query: 181 RHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPL 240
           RHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPL
Sbjct: 169 RHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPL 228

Query: 241 TGMVLAVLLHQGRLPHLFQRNLFYGQKNKYRAPRGKPAPASGDTQTPAKGSSVREPGRSG 300
           TGMVLAVLLHQGRLPHLFQRNLFYGQKNKYRAPRGKPAPASGDTQTPAKGSSVREPGRSG
Sbjct: 229 TGMVLAVLLHQGRLPHLFQRNLFYGQKNKYRAPRGKPAPASGDTQTPAKGSSVREPGRSG 288

Query: 301 VEGPHSS 307
           VEGPHSS
Sbjct: 289 VEGPHSS 295


>gi|27370565 aquaporin 11 [Homo sapiens]
          Length = 271

 Score =  113 bits (283), Expect = 2e-25
 Identities = 75/251 (29%), Positives = 112/251 (44%), Gaps = 6/251 (2%)

Query: 7   SLSFFFATFTLCEAARRASKALLPVGAYEVFAREAVGAVQLGACFLEMRTLVELGPWAGD 66
           SL    +   L   AR  ++  L       F  E +   QL  C  E++ L E  P    
Sbjct: 17  SLGLMLSVVLLMGLARVVARQQLHRPVAHAFVLEFLATFQLCCCTHELQLLSEQHP---- 72

Query: 67  FGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAAC 126
             P   LTL++   L HG+TL G S+NP   + + ++   S     ++L AQ +    + 
Sbjct: 73  AHPTWTLTLVYFFSLVHGLTLVGTSSNPCGVMMQMMLGGMSPETGAVRLLAQLVSALCSR 132

Query: 127 TLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLLHLRHSPPA 186
             T   W+  L+  H+ +   A  C + +R  +    + EA C+F FH  LLH +     
Sbjct: 133 YCTSALWSLGLTQYHVSERSFA--CKNPIRVDLLKAVITEAVCSFLFHSALLHFQEVRTK 190

Query: 187 YSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPLTGMVLA 246
                +A L+T   Y  G  T A FNPALA S+ F C      ++  VYWL P  G++L 
Sbjct: 191 LRIHLLAALITFLVYAGGSLTGAVFNPALALSLHFMCFDEAFPQFFIVYWLAPSLGILLM 250

Query: 247 VLLHQGRLPHL 257
           +L+    LP L
Sbjct: 251 ILMFSFFLPWL 261


>gi|45446752 aquaporin 8 [Homo sapiens]
          Length = 261

 Score = 37.7 bits (86), Expect = 0.013
 Identities = 52/207 (25%), Positives = 74/207 (35%), Gaps = 20/207 (9%)

Query: 51  FLEMRTLVELGPWAGDFGPDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFLMAEESLPG 110
           F+   +++E G   G   P L   L   L +A    + G   NP VSL   L+   +L  
Sbjct: 50  FIGCLSVIENGTDTGLLQPALAHGLALGLVIATLGNISGGHFNPAVSLAAMLIGGLNLVM 109

Query: 111 TLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACA 170
            L    +Q LG      L +             +     +  +A  T    G +  A  A
Sbjct: 110 LLPYWVSQLLGGMLGAALAKAVSP---------EERFWNASGAAFVTVQEQGQVAGALVA 160

Query: 171 FCFHLTLLHLRHSPPAYS----GP----AVALLVTVTAYTAGPFTSAFFNPALAASVTFA 222
                TLL L     A +    GP    ++   VTV     GP +    NPA A      
Sbjct: 161 EIILTTLLALAVCMGAINEKTKGPLAPFSIGFAVTVDILAGGPVSGGCMNPARAFGPAVV 220

Query: 223 CSGHTLLEYVQVYWLGPLTGMVLAVLL 249
            +      +  +YWLGPL   +L  LL
Sbjct: 221 ANH---WNFHWIYWLGPLLAGLLVGLL 244


>gi|86792455 aquaporin 6 [Homo sapiens]
          Length = 282

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 28/192 (14%)

Query: 71  LLLTLLFLLFLAHGVTL----DGASANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAAC 126
           L + + F L  A  V +     GA ANP V+L   + +  SLP  +  +AAQ +G     
Sbjct: 56  LQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGA 115

Query: 127 TLTRLCWAWELSDLHLLQSLMAQSCSSALRTSVPHGALVEAACAFCFHLTLL-------- 178
            L       ++ +   +         + +R SV  G  V         L L         
Sbjct: 116 ALLYGVMPGDIRETLGI---------NVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSR 166

Query: 179 HLRHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLG 238
               SP    G +VAL   +  +    FT    NPA +          T+     V+W+G
Sbjct: 167 QTSGSPATMIGISVALGHLIGIH----FTGCSMNPARSFGPAIIIGKFTV---HWVFWVG 219

Query: 239 PLTGMVLAVLLH 250
           PL G +LA L++
Sbjct: 220 PLMGALLASLIY 231


>gi|4502183 aquaporin 5 [Homo sapiens]
          Length = 265

 Score = 36.6 bits (83), Expect = 0.029
 Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 87  LDGASANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSL 146
           + G   NP ++L   +  + SL      +AAQ +G  A   +      + ++ L+   +L
Sbjct: 63  VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL-----YGVAPLNARGNL 117

Query: 147 MAQSCSSALRTSVPHGALVEAACAF----CFHLTLLHLRHSPPAYSGPAVALLVTVTAYT 202
              + ++   T+     +VE    F    C   +    R SP      ++ L VT+    
Sbjct: 118 AVNALNN--NTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLV 175

Query: 203 AGPFTSAFFNPALAASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLH 250
              FT    NPA +       +  +   +V  +W+GP+ G VLA +L+
Sbjct: 176 GIYFTGCSMNPARSFGPAVVMNRFSPAHWV--FWVGPIVGAVLAAILY 221


>gi|37694062 aquaporin 1 [Homo sapiens]
          Length = 269

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 16/169 (9%)

Query: 87  LDGASANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSL 146
           + GA  NP V+L   L  + S+   L+ + AQ +G   A  +     +  L+   L ++ 
Sbjct: 70  ISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITS-SLTGNSLGRND 128

Query: 147 MAQSCSSALRTSVPH-GALVEAACAFCFHLTLLHLRHSPPAYSGP-AVALLVTVTAYTAG 204
           +A   +S     +   G L    C     L     R      S P A+ L V +    A 
Sbjct: 129 LADGVNSGQGLGIEIIGTLQLVLCV----LATTDRRRRDLGGSAPLAIGLSVALGHLLAI 184

Query: 205 PFTSAFFNPALA---ASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLH 250
            +T    NPA +   A +T   S H       ++W+GP  G  LAVL++
Sbjct: 185 DYTGCGINPARSFGSAVITHNFSNHW------IFWVGPFIGGALAVLIY 227


>gi|4502179 aquaporin 2 [Homo sapiens]
          Length = 271

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 12/167 (7%)

Query: 87  LDGASANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSL 146
           + GA  NP V++   +    S+      +AAQ LG  A   L         +D+    ++
Sbjct: 62  ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITP---ADIRGDLAV 118

Query: 147 MAQSCSSALRTSVPHGALVEAACAFCFHLTLLHLRHSPPAYSGPAVALLVTVTAYTAGPF 206
            A S S+    +V     +      C   +    R   P     ++   V +       +
Sbjct: 119 NALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHY 178

Query: 207 TSAFFNPALA---ASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLH 250
           T    NPA +   A VT     H       V+W+GPL G +L  LL+
Sbjct: 179 TGCSMNPARSLAPAVVTGKFDDHW------VFWIGPLVGAILGSLLY 219


>gi|8923887 zinc finger protein 395 [Homo sapiens]
          Length = 513

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 16/66 (24%), Positives = 34/66 (51%)

Query: 157 TSVPHGALVEAACAFCFHLTLLHLRHSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALA 216
           +S+P GAL ++A    +H+   H   + P++  P    + T  ++ A P  +   +P  +
Sbjct: 386 SSLPSGALSKSAPGSFWHIQADHAYQALPSFQIPVSPHIYTSVSWAAAPSAACSLSPVRS 445

Query: 217 ASVTFA 222
            S++F+
Sbjct: 446 RSLSFS 451


>gi|4755125 aquaporin 4 isoform b [Homo sapiens]
          Length = 301

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 54/224 (24%), Positives = 85/224 (37%), Gaps = 22/224 (9%)

Query: 40  EAVGAVQLGACFLEMRTLVELGPWAGDFGP----DLLLTLLFLLFLAHGVT----LDGAS 91
           +AV A  L      + +L     W G   P     +L++L F L +A  V     + G  
Sbjct: 14  KAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGH 73

Query: 92  ANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSLMAQSC 151
            NP V++      + S+  ++  +AAQ LG      +  L     ++   ++  L     
Sbjct: 74  INPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYL-----VTPPSVVGGLGVTMV 128

Query: 152 SSALRTSVPHGALVEAACAFCFHLTLLHLRHSPPAYSGPAVALL----VTVTAYTAGPFT 207
              L     HG LVE    F    T+     S       ++AL     V +    A  +T
Sbjct: 129 HGNLTAG--HGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYT 186

Query: 208 SAFFNPALAASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLHQ 251
            A  NPA +             E   +YW+GP+ G VLA  L++
Sbjct: 187 GASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYE 227


>gi|4502181 aquaporin 4 isoform a [Homo sapiens]
          Length = 323

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 54/224 (24%), Positives = 85/224 (37%), Gaps = 22/224 (9%)

Query: 40  EAVGAVQLGACFLEMRTLVELGPWAGDFGP----DLLLTLLFLLFLAHGVT----LDGAS 91
           +AV A  L      + +L     W G   P     +L++L F L +A  V     + G  
Sbjct: 36  KAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGH 95

Query: 92  ANPTVSLQEFLMAEESLPGTLLKLAAQGLGMQAACTLTRLCWAWELSDLHLLQSLMAQSC 151
            NP V++      + S+  ++  +AAQ LG      +  L     ++   ++  L     
Sbjct: 96  INPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYL-----VTPPSVVGGLGVTMV 150

Query: 152 SSALRTSVPHGALVEAACAFCFHLTLLHLRHSPPAYSGPAVALL----VTVTAYTAGPFT 207
              L     HG LVE    F    T+     S       ++AL     V +    A  +T
Sbjct: 151 HGNLTAG--HGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYT 208

Query: 208 SAFFNPALAASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLHQ 251
            A  NPA +             E   +YW+GP+ G VLA  L++
Sbjct: 209 GASMNPARSFGPAVIMGNW---ENHWIYWVGPIIGAVLAGGLYE 249


>gi|189217915 syntaxin binding protein 5 (tomosyn) isoform b [Homo
           sapiens]
          Length = 1151

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 43/168 (25%), Positives = 62/168 (36%), Gaps = 38/168 (22%)

Query: 148 AQSCSSALRTSVPHGALVEAACAFCFHLTLLHLRHSPPAYSGPAVALLVTVTAYTAGPFT 207
           + S S  LR +VP           C  +    L+ SP  Y    V  LV V        T
Sbjct: 586 SSSSSDGLRDNVP-----------CLKVKNSPLKQSP-GYQTELVIQLVWVGGEPPQQIT 633

Query: 208 SAFFNPALAASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLHQGRLPHLFQRNLFYGQK 267
           S   N +    V   C+G  +++Y+Q            AVLL+ G +         YG  
Sbjct: 634 SLAVNSSYGLVVFGNCNGIAMVDYLQ-----------KAVLLNLGTIE-------LYGSN 675

Query: 268 NKY----RAPRGKPAPASGDTQTPAKGSSVRE----PGRSGVEGPHSS 307
           + Y    R+PR    P+       ++G+ V E       SG   PH+S
Sbjct: 676 DPYRREPRSPRKSRQPSGAGLCDISEGTVVPEDRCKSPTSGSSSPHNS 723


>gi|15529998 solute carrier family 9 (sodium/hydrogen exchanger),
           member 2 [Homo sapiens]
          Length = 812

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 69  PDLLLTLLFLLFLAHGVTLDGASANPTVSLQEFL--MAEESLPGTLLKLAAQGLGMQAAC 126
           P  + T +F L+L   + LD     PT    E +  +   ++ GTL      G+ +   C
Sbjct: 133 PPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENIGTIFWYAVVGTLWNSIGIGVSLFGIC 192

Query: 127 TLTRLCWAWELSDLHLLQSLMAQSCSSAL 155
            +     A+ LSD+ LLQ+L+  S  SA+
Sbjct: 193 QIE----AFGLSDITLLQNLLFGSLISAV 217


>gi|124107604 killer cell immunoglobulin-like receptor, two domains,
           long cytoplasmic tail, 4 isoform b [Homo sapiens]
          Length = 273

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 182 HSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAA--SVTFACSGHT 227
           HSP  +S P+  L++ VT     P  +A   P + A  +VT +CS  +
Sbjct: 103 HSPTEWSAPSNPLVIMVTGLYEKPSLTARPGPTVRAGENVTLSCSSQS 150


>gi|124107606 killer cell immunoglobulin-like receptor, two domains,
           long cytoplasmic tail, 4 isoform a [Homo sapiens]
          Length = 377

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 182 HSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAA--SVTFACSGHT 227
           HSP  +S P+  L++ VT     P  +A   P + A  +VT +CS  +
Sbjct: 103 HSPTEWSAPSNPLVIMVTGLYEKPSLTARPGPTVRAGENVTLSCSSQS 150


>gi|124107610 killer cell immunoglobulin-like receptor, two domains,
           long cytoplasmic tail, 4 isoform c [Homo sapiens]
          Length = 342

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 182 HSPPAYSGPAVALLVTVTAYTAGPFTSAFFNPALAA--SVTFACSGHT 227
           HSP  +S P+  L++ VT     P  +A   P + A  +VT +CS  +
Sbjct: 103 HSPTEWSAPSNPLVIMVTGLYEKPSLTARPGPTVRAGENVTLSCSSQS 150


>gi|189217897 syntaxin binding protein 5 (tomosyn) isoform a [Homo
           sapiens]
          Length = 1115

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 34/152 (22%)

Query: 148 AQSCSSALRTSVPHGALVEAACAFCFHLTLLHLRHSPPAYSGPAVALLVTVTAYTAGPFT 207
           + S S  LR +VP           C  +    L+ SP  Y    V  LV V        T
Sbjct: 586 SSSSSDGLRDNVP-----------CLKVKNSPLKQSP-GYQTELVIQLVWVGGEPPQQIT 633

Query: 208 SAFFNPALAASVTFACSGHTLLEYVQVYWLGPLTGMVLAVLLHQGRLPHLFQRNLFYGQK 267
           S   N +    V   C+G  +++Y+Q            AVLL+ G +         YG  
Sbjct: 634 SLAVNSSYGLVVFGNCNGIAMVDYLQ-----------KAVLLNLGTIE-------LYGSN 675

Query: 268 NKY----RAPRGKPAPASGDTQTPAKGSSVRE 295
           + Y    R+PR    P+       ++G+ V E
Sbjct: 676 DPYRREPRSPRKSRQPSGAGLCDISEGTVVPE 707


>gi|98991769 taspase 1 precursor [Homo sapiens]
          Length = 420

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 109 PGTLLKLAAQGLGMQAACTLTRLCWAWELSDL----HLLQSLMAQSCSSALRTSVPHGAL 164
           PG + + A  G G  A  T     ++  +S      HL+++++A+ CS AL+    H AL
Sbjct: 260 PGRVGQAALYGCGCWAENTGAHNPYSTAVSTSGCGEHLVRTILARECSHALQAEDAHQAL 319

Query: 165 VE 166
           +E
Sbjct: 320 LE 321


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,867,214
Number of Sequences: 37866
Number of extensions: 526233
Number of successful extensions: 2435
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2421
Number of HSP's gapped (non-prelim): 19
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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