Search of human proteins with 15617199

Search of human proteins with 15617199

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15617199 histone cluster 3, H2a [Homo sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15617199 histone cluster 3, H2a [Homo sapiens]                     254   1e-68
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                     253   3e-68
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                    253   3e-68
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                    253   3e-68
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                    252   7e-68
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                  251   1e-67
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                    251   1e-67
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                    251   1e-67
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                     251   1e-67
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                     251   1e-67
gi|4504249 histone cluster 1, H2am [Homo sapiens]                     251   1e-67
gi|4504243 histone cluster 1, H2al [Homo sapiens]                     251   1e-67
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                    246   3e-66
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                    245   8e-66
gi|24638446 histone cluster 2, H2ac [Homo sapiens]                    241   1e-64
gi|28195394 histone cluster 2, H2ab [Homo sapiens]                    240   2e-64
gi|25092737 histone cluster 1, H2aa [Homo sapiens]                    239   6e-64
gi|29553970 H2A histone family, member J [Homo sapiens]               236   5e-63
gi|4504253 H2A histone family, member X [Homo sapiens]                227   2e-60
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]      152   9e-38
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]     152   9e-38
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]     152   9e-38
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]     152   9e-38
gi|8923920 H2A histone family, member Y2 [Homo sapiens]               148   1e-36
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      139   5e-34
gi|4504255 H2A histone family, member Z [Homo sapiens]                138   1e-33
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     126   6e-30
gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]          116   6e-27
gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]          116   6e-27
gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]          116   6e-27

>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score =  254 bits (649), Expect = 1e-68
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score =  253 bits (646), Expect = 3e-68
 Identities = 129/130 (99%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score =  253 bits (646), Expect = 3e-68
 Identities = 129/130 (99%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score =  253 bits (646), Expect = 3e-68
 Identities = 129/130 (99%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score =  252 bits (643), Expect = 7e-68
 Identities = 128/130 (98%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score =  251 bits (641), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score =  251 bits (641), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score =  251 bits (640), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score =  251 bits (640), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score =  251 bits (640), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score =  251 bits (640), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score =  251 bits (640), Expect = 1e-67
 Identities = 127/130 (97%), Positives = 130/130 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESHHKAKGK
Sbjct: 121 TESHHKAKGK 130


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score =  246 bits (629), Expect = 3e-66
 Identities = 125/128 (97%), Positives = 128/128 (100%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAK 128
           TESHHKAK
Sbjct: 121 TESHHKAK 128


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score =  245 bits (625), Expect = 8e-66
 Identities = 124/128 (96%), Positives = 127/128 (99%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAK+RSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAK 128
           TESHHK K
Sbjct: 121 TESHHKTK 128


>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score =  241 bits (615), Expect = 1e-64
 Identities = 125/130 (96%), Positives = 128/130 (98%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVY+AAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TES HKAK K
Sbjct: 121 TES-HKAKSK 129


>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score =  240 bits (613), Expect = 2e-64
 Identities = 123/130 (94%), Positives = 125/130 (96%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLA+RNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TESH   K K
Sbjct: 121 TESHKPGKNK 130


>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score =  239 bits (609), Expect = 6e-64
 Identities = 122/131 (93%), Positives = 128/131 (97%), Gaps = 1/131 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGKARAK+KSRSSRAGLQFPVGR+HRLLRKGNY+ER+GAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNA+RDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES-HHKAKGK 130
           TES HHKA+ K
Sbjct: 121 TESHHHKAQSK 131


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score =  236 bits (601), Expect = 5e-63
 Identities = 123/130 (94%), Positives = 125/130 (96%), Gaps = 1/130 (0%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGKQGGK RAKAKSRSSRAGLQFPVGRVHRLLRKGNY+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG+VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TESHHKAKGK 130
           TES  K K K
Sbjct: 121 TES-QKTKSK 129


>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score =  227 bits (579), Expect = 2e-60
 Identities = 117/123 (95%), Positives = 120/123 (97%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGRGK GGKARAKAKSRSSRAGLQFPVGRVHRLLRKG+Y+ERVGAGAPVYLAAVLEYLT
Sbjct: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLG VTIAQGGVLPNIQAVLLPKK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120

Query: 121 TES 123
           T +
Sbjct: 121 TSA 123


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHK 126
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S  K
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGK 123


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHK 126
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S  K
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGK 123


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHK 126
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S  K
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGK 123


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score =  152 bits (383), Expect = 9e-38
 Identities = 78/120 (65%), Positives = 94/120 (78%)

Query: 7   QGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILEL 66
           +GGK ++   SRS++AG+ FPVGR+ R ++KG+   R+G GAPVY+AAVLEYLTAEILEL
Sbjct: 4   RGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILEL 63

Query: 67  AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHK 126
           AGNAARDNKK R+ PRH+ LA+ NDEELN+LL  VTIA GGVLPNI   LL KK  S  K
Sbjct: 64  AGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGSKGK 123


>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score =  148 bits (374), Expect = 1e-36
 Identities = 79/128 (61%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117

Query: 121 TESHHKAK 128
             +  K++
Sbjct: 118 RGTKGKSE 125


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  139 bits (351), Expect = 5e-34
 Identities = 77/117 (65%), Positives = 90/117 (76%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+ + TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  138 bits (348), Expect = 1e-33
 Identities = 76/117 (64%), Positives = 89/117 (76%), Gaps = 2/117 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+ KA SRS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+ + TIA GGV+P+I   L+ KK
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGGGVIPHIHKSLIGKK 122


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  126 bits (316), Expect = 6e-30
 Identities = 70/103 (67%), Positives = 80/103 (77%), Gaps = 2/103 (1%)

Query: 5   GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEI 63
           GK  GKA+AKA SRS RAGLQFPVGR+HR L+    S  RVGA A VY AA+LEYLTAE+
Sbjct: 7   GKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEV 66

Query: 64  LELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQG 106
           LELAGNA++D K  RI PRHLQLAIR DEEL+ L+ + TIA G
Sbjct: 67  LELAGNASKDLKVKRITPRHLQLAIRGDEELDSLI-KATIAGG 108


>gi|169206129 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  116 bits (290), Expect = 6e-27
 Identities = 71/130 (54%), Positives = 80/130 (61%), Gaps = 19/130 (14%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG+V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESHHKAKGK 130
           TESH K K K
Sbjct: 102 TESHLKVKEK 111


>gi|169206468 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  116 bits (290), Expect = 6e-27
 Identities = 71/130 (54%), Positives = 80/130 (61%), Gaps = 19/130 (14%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG+V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESHHKAKGK 130
           TESH K K K
Sbjct: 102 TESHLKVKEK 111


>gi|169205922 PREDICTED: similar to hCG1643984 [Homo sapiens]
          Length = 111

 Score =  116 bits (290), Expect = 6e-27
 Identities = 71/130 (54%), Positives = 80/130 (61%), Gaps = 19/130 (14%)

Query: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60
           MSG GKQ  KA  +AK++ S   LQF  G VH LL KGNY E+                 
Sbjct: 1   MSGCGKQSSKACTEAKTQPSWVSLQFLTGCVHLLLFKGNYYEK----------------- 43

Query: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
             ILELAGN   DNKKT II  HLQLA  N+E++NKLLG+V I Q  VLPNIQA +LPKK
Sbjct: 44  --ILELAGNGTCDNKKTCIILHHLQLASCNNEDVNKLLGKVIITQVTVLPNIQAKMLPKK 101

Query: 121 TESHHKAKGK 130
           TESH K K K
Sbjct: 102 TESHLKVKEK 111


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,520,264
Number of Sequences: 37866
Number of extensions: 175844
Number of successful extensions: 516
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 445
Number of HSP's gapped (non-prelim): 63
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.