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Search of human proteins with 156139127
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156139127 hypothetical protein LOC80007 [Homo sapiens]
(445 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156139127 hypothetical protein LOC80007 [Homo sapiens] 899 0.0
gi|110224479 prosaposin isoform c preproprotein [Homo sapiens] 34 0.31
gi|110224476 prosaposin isoform b preproprotein [Homo sapiens] 34 0.31
gi|11386147 prosaposin isoform a preproprotein [Homo sapiens] 34 0.31
gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens] 33 0.52
gi|4504335 kalirin, RhoGEF kinase isoform 2 [Homo sapiens] 33 0.52
gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens] 32 1.2
gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens] 32 1.2
gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens] 32 1.2
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 32 1.5
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens] 32 1.5
gi|13699824 kinesin family member 11 [Homo sapiens] 31 2.6
gi|24797086 importin 5 [Homo sapiens] 31 2.6
gi|13699818 cytochrome P450, family 2, subfamily C, polypeptide ... 30 3.4
gi|7705433 eukaryotic translation initiation factor 3 subunit 6 ... 30 3.4
gi|6005812 dual specificity phosphatase 10 isoform a [Homo sapiens] 30 4.4
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 30 5.8
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 30 5.8
gi|197313728 pleckstrin homology-like domain, family B, member 2... 30 5.8
gi|21955172 pleckstrin homology-like domain, family B, member 2 ... 30 5.8
gi|197313732 pleckstrin homology-like domain, family B, member 2... 29 7.5
gi|197313730 pleckstrin homology-like domain, family B, member 2... 29 7.5
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is... 29 9.9
gi|80861396 centrobin, centrosomal BRCA2 interacting protein iso... 29 9.9
>gi|156139127 hypothetical protein LOC80007 [Homo sapiens]
Length = 445
Score = 899 bits (2322), Expect = 0.0
Identities = 445/445 (100%), Positives = 445/445 (100%)
Query: 1 METRTEDGGLTRRPTLASSWDVAGGALTHSLLLTRAGLGPGDFDWEELLAPPAPGQDLVI 60
METRTEDGGLTRRPTLASSWDVAGGALTHSLLLTRAGLGPGDFDWEELLAPPAPGQDLVI
Sbjct: 1 METRTEDGGLTRRPTLASSWDVAGGALTHSLLLTRAGLGPGDFDWEELLAPPAPGQDLVI 60
Query: 61 LKRNHNNKDENPCFLYLRCGPDGGEEIASIGILSSARNMEVYLGEEYCGTSRGKNVCTVL 120
LKRNHNNKDENPCFLYLRCGPDGGEEIASIGILSSARNMEVYLGEEYCGTSRGKNVCTVL
Sbjct: 61 LKRNHNNKDENPCFLYLRCGPDGGEEIASIGILSSARNMEVYLGEEYCGTSRGKNVCTVL 120
Query: 121 DDSEHEKIILYKKNLKLESSTHACKIKLLSFGERQCVFISKVVVHMRSVFANSSTSSPAL 180
DDSEHEKIILYKKNLKLESSTHACKIKLLSFGERQCVFISKVVVHMRSVFANSSTSSPAL
Sbjct: 121 DDSEHEKIILYKKNLKLESSTHACKIKLLSFGERQCVFISKVVVHMRSVFANSSTSSPAL 180
Query: 181 GSRIDLDKVQTIMESMGSKLSPGAQQLMDMVRCQQRNCIPIGEQLQSVLGNSGYKHMIGL 240
GSRIDLDKVQTIMESMGSKLSPGAQQLMDMVRCQQRNCIPIGEQLQSVLGNSGYKHMIGL
Sbjct: 181 GSRIDLDKVQTIMESMGSKLSPGAQQLMDMVRCQQRNCIPIGEQLQSVLGNSGYKHMIGL 240
Query: 241 QSSSTLGTLNKSSSTPFPFRTGLTSGNVTENLQTYIDKSTQLPGGENSTKLDECKVMPQN 300
QSSSTLGTLNKSSSTPFPFRTGLTSGNVTENLQTYIDKSTQLPGGENSTKLDECKVMPQN
Sbjct: 241 QSSSTLGTLNKSSSTPFPFRTGLTSGNVTENLQTYIDKSTQLPGGENSTKLDECKVMPQN 300
Query: 301 HSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKH 360
HSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKH
Sbjct: 301 HSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKH 360
Query: 361 GERILGVGMEEQSICSYLEKILSKNMELMEKKLMDYIDQRIHELQEHIDDKIALLLDLLQ 420
GERILGVGMEEQSICSYLEKILSKNMELMEKKLMDYIDQRIHELQEHIDDKIALLLDLLQ
Sbjct: 361 GERILGVGMEEQSICSYLEKILSKNMELMEKKLMDYIDQRIHELQEHIDDKIALLLDLLQ 420
Query: 421 NPNSPPTGIPLRHYDSGERLSNGER 445
NPNSPPTGIPLRHYDSGERLSNGER
Sbjct: 421 NPNSPPTGIPLRHYDSGERLSNGER 445
>gi|110224479 prosaposin isoform c preproprotein [Homo sapiens]
Length = 526
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 305 ENDLKNAMASFLPKKVSD--NSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKHGE 362
++D+ + FL K+V+ ++N E+L +CS+ L ECQE + +G
Sbjct: 312 KSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSK---LPKSLSEECQEVVDTYGS 368
Query: 363 RILGVGMEEQS---ICSYLEKILSKNMELME---------------KKLMDYIDQRIHE 403
IL + +EE S +CS L + + KKL+ Y+D+ + +
Sbjct: 369 SILSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEK 427
>gi|110224476 prosaposin isoform b preproprotein [Homo sapiens]
Length = 527
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 305 ENDLKNAMASFLPKKVSD--NSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKHGE 362
++D+ + FL K+V+ ++N E+L +CS+ L ECQE + +G
Sbjct: 313 KSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSK---LPKSLSEECQEVVDTYGS 369
Query: 363 RILGVGMEEQS---ICSYLEKILSKNMELME---------------KKLMDYIDQRIHE 403
IL + +EE S +CS L + + KKL+ Y+D+ + +
Sbjct: 370 SILSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEK 428
>gi|11386147 prosaposin isoform a preproprotein [Homo sapiens]
Length = 524
Score = 33.9 bits (76), Expect = 0.31
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 305 ENDLKNAMASFLPKKVSD--NSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKHGE 362
++D+ + FL K+V+ ++N E+L +CS+ L ECQE + +G
Sbjct: 310 KSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSK---LPKSLSEECQEVVDTYGS 366
Query: 363 RILGVGMEEQS---ICSYLEKILSKNMELME---------------KKLMDYIDQRIHE 403
IL + +EE S +CS L + + KKL+ Y+D+ + +
Sbjct: 367 SILSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEK 425
>gi|148839466 kalirin, RhoGEF kinase isoform 1 [Homo sapiens]
Length = 2986
Score = 33.1 bits (74), Expect = 0.52
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 290 KLDECKVMPQNHSFLENDLKNAMASFLPKKVSDNSNIP-NSELLPFLQNLCSQVNHLHVG 348
+LD+ +V + L ++ K + FL ++ + I +EL + ++L Q+N +
Sbjct: 746 QLDDAQVQMEE---LFHERKIKLDIFLQLRIFEQYTIEVTAELDAWNEDLLRQMNDFNTE 802
Query: 349 NKTECQENITKHGERILGVG-------MEEQSICSYLEKILSKNMELMEKKLMDYIDQRI 401
+ T ++ + +H ER L + + Q + Y+ ++ + +EL+ +K +D Q +
Sbjct: 803 DLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELICEKDIDLAAQ-V 861
Query: 402 HELQEHIDDK 411
EL E + +K
Sbjct: 862 QELLEFLHEK 871
>gi|4504335 kalirin, RhoGEF kinase isoform 2 [Homo sapiens]
Length = 1663
Score = 33.1 bits (74), Expect = 0.52
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 290 KLDECKVMPQNHSFLENDLKNAMASFLPKKVSDNSNIP-NSELLPFLQNLCSQVNHLHVG 348
+LD+ +V + L ++ K + FL ++ + I +EL + ++L Q+N +
Sbjct: 746 QLDDAQVQMEE---LFHERKIKLDIFLQLRIFEQYTIEVTAELDAWNEDLLRQMNDFNTE 802
Query: 349 NKTECQENITKHGERILGVG-------MEEQSICSYLEKILSKNMELMEKKLMDYIDQRI 401
+ T ++ + +H ER L + + Q + Y+ ++ + +EL+ +K +D Q +
Sbjct: 803 DLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELICEKDIDLAAQ-V 861
Query: 402 HELQEHIDDK 411
EL E + +K
Sbjct: 862 QELLEFLHEK 871
>gi|4507693 tuberous sclerosis 1 protein isoform 1 [Homo sapiens]
Length = 1164
Score = 32.0 bits (71), Expect = 1.2
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 286 ENSTKLDECKVMPQNHSFLENDLKNA---------MASFLPKKVSDNSNIPNS-ELLPFL 335
E TKL++C+ M L +LK A + S + +K+S++ ++ E L
Sbjct: 795 ELQTKLEDCRNMIAE---LRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQ 851
Query: 336 QNLCSQVNHLHVGNKTECQENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKLMD 395
+ +VN L++ ++ KH + V M + + LEK +++ L + + +D
Sbjct: 852 LLVLGEVNELYL------EQLQNKHSDTTKEVEMMKAAYRKELEK--NRSHVLQQTQRLD 903
Query: 396 YIDQRIHELQEHIDDKIALLLD 417
+RI EL+ H+ K LLL+
Sbjct: 904 TSQKRILELESHLAKKDHLLLE 925
>gi|241666464 tuberous sclerosis 1 protein isoform 4 [Homo sapiens]
Length = 1113
Score = 32.0 bits (71), Expect = 1.2
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 286 ENSTKLDECKVMPQNHSFLENDLKNA---------MASFLPKKVSDNSNIPNS-ELLPFL 335
E TKL++C+ M L +LK A + S + +K+S++ ++ E L
Sbjct: 744 ELQTKLEDCRNMIAE---LRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQ 800
Query: 336 QNLCSQVNHLHVGNKTECQENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKLMD 395
+ +VN L++ ++ KH + V M + + LEK +++ L + + +D
Sbjct: 801 LLVLGEVNELYL------EQLQNKHSDTTKEVEMMKAAYRKELEK--NRSHVLQQTQRLD 852
Query: 396 YIDQRIHELQEHIDDKIALLLD 417
+RI EL+ H+ K LLL+
Sbjct: 853 TSQKRILELESHLAKKDHLLLE 874
>gi|241666462 tuberous sclerosis 1 protein isoform 3 [Homo sapiens]
Length = 1163
Score = 32.0 bits (71), Expect = 1.2
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 286 ENSTKLDECKVMPQNHSFLENDLKNA---------MASFLPKKVSDNSNIPNS-ELLPFL 335
E TKL++C+ M L +LK A + S + +K+S++ ++ E L
Sbjct: 794 ELQTKLEDCRNMIAE---LRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQ 850
Query: 336 QNLCSQVNHLHVGNKTECQENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKLMD 395
+ +VN L++ ++ KH + V M + + LEK +++ L + + +D
Sbjct: 851 LLVLGEVNELYL------EQLQNKHSDTTKEVEMMKAAYRKELEK--NRSHVLQQTQRLD 902
Query: 396 YIDQRIHELQEHIDDKIALLLD 417
+RI EL+ H+ K LLL+
Sbjct: 903 TSQKRILELESHLAKKDHLLLE 924
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 31.6 bits (70), Expect = 1.5
Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 240 LQSSSTLGTLNKSS----STPFPFRTGLTSGN-VTENLQTYIDKSTQLPGGENSTKLDEC 294
L SS LG+L K P T + N VT NL ++ L D C
Sbjct: 745 LSLSSQLGSLEKFKRQYGKVENPLDTEVEESNGVTTNLSLQVEPDILLKDKNRLENSDVC 804
Query: 295 KVMPQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNL-CSQVNHLHVGNKTEC 353
K+ HS ++ + A S+I NSE PF ++ C + +
Sbjct: 805 KITTMEHSDSDSSCQPA------------SHILNSEKFPFSKDEDCLEQQMPSLRESPMT 852
Query: 354 QENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKLMDYIDQRIHELQEHIDDKIA 413
+ ++ + L + +S+ S L ++ E +M ++ + D K+
Sbjct: 853 LKELSLFNRKPLDLEKSSESLASKLSRLKGSERETQTMGMMSRFNELPNSDSSRKDSKLC 912
Query: 414 LLL 416
+L
Sbjct: 913 SVL 915
>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
Length = 1429
Score = 31.6 bits (70), Expect = 1.5
Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 240 LQSSSTLGTLNKSS----STPFPFRTGLTSGN-VTENLQTYIDKSTQLPGGENSTKLDEC 294
L SS LG+L K P T + N VT NL ++ L D C
Sbjct: 745 LSLSSQLGSLEKFKRQYGKVENPLDTEVEESNGVTTNLSLQVEPDILLKDKNRLENSDVC 804
Query: 295 KVMPQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNL-CSQVNHLHVGNKTEC 353
K+ HS ++ + A S+I NSE PF ++ C + +
Sbjct: 805 KITTMEHSDSDSSCQPA------------SHILNSEKFPFSKDEDCLEQQMPSLRESPMT 852
Query: 354 QENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKLMDYIDQRIHELQEHIDDKIA 413
+ ++ + L + +S+ S L ++ E +M ++ + D K+
Sbjct: 853 LKELSLFNRKPLDLEKSSESLASKLSRLKGSERETQTMGMMSRFNELPNSDSSRKDSKLC 912
Query: 414 LLL 416
+L
Sbjct: 913 SVL 915
>gi|13699824 kinesin family member 11 [Homo sapiens]
Length = 1056
Score = 30.8 bits (68), Expect = 2.6
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 267 NVTENLQTYIDKSTQLPGGENSTKLDECKVMPQNHSFLE-------NDLKNAMASFLPKK 319
+ L ++++T+ G +S KLD K + Q+++ + N L N M +
Sbjct: 494 DAASKLLNTVEETTKDVSGLHS-KLDRKKAVDQHNAEAQDIFGKNLNSLFNNMEELIKDG 552
Query: 320 VSDNSNIPNSELLPFLQNLCSQVNHLH------VGNKTECQENITKHGERILGVGMEEQS 373
S + F L S V+ L +G+ T EN++ H +I + ++EQS
Sbjct: 553 SSKQKAMLEVHKTLFGNLLSSSVSALDTITTVALGSLTSIPENVSTHVSQIFNMILKEQS 612
Query: 374 ICSYLEKILSKNMELMEKKLMDYID 398
+ + + +L + + +++ L+ ++
Sbjct: 613 LAAESKTVLQELINVLKTDLLSSLE 637
>gi|24797086 importin 5 [Homo sapiens]
Length = 1115
Score = 30.8 bits (68), Expect = 2.6
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 320 VSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENITKHGERILGVGMEEQSICSYLE 379
++ + P S L+P+L NL V HLH + QE I K + +L EQ + S
Sbjct: 485 INFTEDCPKSLLIPYLDNL---VKHLHSIMVLKLQELIQKGTKLVL-----EQVVTS--- 533
Query: 380 KILSKNMELMEKKLMDYIDQRIHELQEHIDDKIALLLDLLQ 420
++ + E+K + Y D + L+ +++ + L LL+
Sbjct: 534 --IASVADTAEEKFVPYYDLFMPSLKHIVENAVQKELRLLR 572
>gi|13699818 cytochrome P450, family 2, subfamily C, polypeptide 9
[Homo sapiens]
Length = 490
Score = 30.4 bits (67), Expect = 3.4
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 295 KVMPQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQ 354
KV S N+ ++ + FL K + N P+ + L+N + G TE
Sbjct: 247 KVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL----FGAGTETT 302
Query: 355 ENITKHGERILGVGMEEQS-ICSYLEKILSKNME--LMEKKLMDYIDQRIHELQEHID 409
++ +L E + + +E+++ +N + ++ M Y D +HE+Q +ID
Sbjct: 303 STTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYID 360
>gi|7705433 eukaryotic translation initiation factor 3 subunit 6
interacting protein [Homo sapiens]
Length = 564
Score = 30.4 bits (67), Expect = 3.4
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 371 EQSICSYLEKILSKNMELMEKKLMDYIDQRIHELQ------EHIDDKIALLLDLLQN 421
EQ + +++ ++ K + D IDQ+++ELQ + ID K+ + D+ +N
Sbjct: 41 EQQTYQVIPEVIKNFIQYFHKTVSDLIDQKVYELQASRVSSDVIDQKVYEIQDIYEN 97
>gi|6005812 dual specificity phosphatase 10 isoform a [Homo sapiens]
Length = 482
Score = 30.0 bits (66), Expect = 4.4
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 26/110 (23%)
Query: 246 LGTLNKSSSTPFPFRTGLTSGNVTENLQTYIDKSTQLPGGENSTKLDECKVMPQNHSFLE 305
L +L + P + GL+S +N + D NS +L EC+ + S
Sbjct: 256 LESLKREGKEPLVLKGGLSS--FKQNHENLCD---------NSLQLQECREVGGGAS--- 301
Query: 306 NDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQE 355
A +S LP+ + +I N+EL P L L +GN+ + Q+
Sbjct: 302 -----AASSLLPQPIPTTPDIENAELTPILP-------FLFLGNEQDAQD 339
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 29.6 bits (65), Expect = 5.8
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 219 IPIGEQLQSVLGNSGYKHMIGLQSSSTLGTLNKSSSTPFPFRTGLTSGNVTENLQTYIDK 278
+P GE L++ G + + GL S L T ++ +GL SG V E +++
Sbjct: 1280 LPSGEVLETTA--PGVEEISGLPSGEVLET----TAPGVDEISGLPSGEVLETTAPGVEE 1333
Query: 279 STQLPGGE----NSTKLDECKVMPQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPF 334
+ LP GE +++ + + +P LE + V D S +P+ E++
Sbjct: 1334 ISGLPSGEVLETSTSAVGDLSGLPSGGEVLEISVSG---------VEDISGLPSGEVVET 1384
Query: 335 LQNLCSQVNHLHVGNKTE 352
+ V+ L G E
Sbjct: 1385 SASGIEDVSELPSGEGLE 1402
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 29.6 bits (65), Expect = 5.8
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 219 IPIGEQLQSVLGNSGYKHMIGLQSSSTLGTLNKSSSTPFPFRTGLTSGNVTENLQTYIDK 278
+P GE L++ G + + GL S L T ++ +GL SG V E +++
Sbjct: 1280 LPSGEVLETTA--PGVEEISGLPSGEVLET----TAPGVDEISGLPSGEVLETTAPGVEE 1333
Query: 279 STQLPGGE----NSTKLDECKVMPQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPF 334
+ LP GE +++ + + +P LE + V D S +P+ E++
Sbjct: 1334 ISGLPSGEVLETSTSAVGDLSGLPSGGEVLEISVSG---------VEDISGLPSGEVVET 1384
Query: 335 LQNLCSQVNHLHVGNKTE 352
+ V+ L G E
Sbjct: 1385 SASGIEDVSELPSGEGLE 1402
>gi|197313728 pleckstrin homology-like domain, family B, member 2
isoform b [Homo sapiens]
Length = 1237
Score = 29.6 bits (65), Expect = 5.8
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 298 PQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENI 357
P + +F + +++ S LPK S S+ L ++ + + + N E ++ I
Sbjct: 580 PPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAME----ETRIVILNNLEELKQKI 635
Query: 358 TKHGERILGVGMEEQSICSYLE-KILSKNMELM-EKKLMDYIDQRIHELQEHI---DDKI 412
+++ E C+ L+ + S+ ELM EK+++D+++++I EL+++I K
Sbjct: 636 KDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEKNIVGEKTKD 695
Query: 413 ALLLDL 418
A LLD+
Sbjct: 696 ADLLDV 701
>gi|21955172 pleckstrin homology-like domain, family B, member 2
isoform c [Homo sapiens]
Length = 1210
Score = 29.6 bits (65), Expect = 5.8
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 298 PQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENI 357
P + +F + +++ S LPK S S+ L ++ + + + N E ++ I
Sbjct: 553 PPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAME----ETRIVILNNLEELKQKI 608
Query: 358 TKHGERILGVGMEEQSICSYLE-KILSKNMELM-EKKLMDYIDQRIHELQEHI---DDKI 412
+++ E C+ L+ + S+ ELM EK+++D+++++I EL+++I K
Sbjct: 609 KDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEKNIVGEKTKD 668
Query: 413 ALLLDL 418
A LLD+
Sbjct: 669 ADLLDV 674
>gi|197313732 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 29.3 bits (64), Expect = 7.5
Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 298 PQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENI 357
P + +F + +++ S LPK S S+ L ++ + + + N E ++ I
Sbjct: 553 PPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAME----ETRIVILNNLEELKQKI 608
Query: 358 TKHGERILGVGMEEQSICSYLE-KILSKNMELM-EKKLMDYIDQRIHELQEHI 408
+++ E C+ L+ + S+ ELM EK+++D+++++I EL+++I
Sbjct: 609 KDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEKNI 661
>gi|197313730 pleckstrin homology-like domain, family B, member 2
isoform a [Homo sapiens]
Length = 1253
Score = 29.3 bits (64), Expect = 7.5
Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 298 PQNHSFLENDLKNAMASFLPKKVSDNSNIPNSELLPFLQNLCSQVNHLHVGNKTECQENI 357
P + +F + +++ S LPK S S+ L ++ + + + N E ++ I
Sbjct: 553 PPSSTFPKASSESSYLSILPKTPEGISEEQRSQELAAME----ETRIVILNNLEELKQKI 608
Query: 358 TKHGERILGVGMEEQSICSYLE-KILSKNMELM-EKKLMDYIDQRIHELQEHI 408
+++ E C+ L+ + S+ ELM EK+++D+++++I EL+++I
Sbjct: 609 KDINDQMDESFRELDMECALLDGEQKSETTELMKEKEILDHLNRKIAELEKNI 661
>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
isoform alpha [Homo sapiens]
Length = 903
Score = 28.9 bits (63), Expect = 9.9
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 336 QNLCSQVNHLHV--GNKTECQENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKL 393
Q L SQ+ V + E Q+ + + E L + E+ +C ++ S N +L E+++
Sbjct: 494 QELASQLAQFKVEMAEREERQQQVAEDYE--LRLAREQARVC----ELQSGNQQLEEQRV 547
Query: 394 MDYIDQRIHELQEHIDDKIALLLDLL--QNPNSPPTG 428
+ +++ LQ H D+ LL L NP +PP G
Sbjct: 548 -ELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAG 583
>gi|80861396 centrobin, centrosomal BRCA2 interacting protein
isoform beta [Homo sapiens]
Length = 925
Score = 28.9 bits (63), Expect = 9.9
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 336 QNLCSQVNHLHV--GNKTECQENITKHGERILGVGMEEQSICSYLEKILSKNMELMEKKL 393
Q L SQ+ V + E Q+ + + E L + E+ +C ++ S N +L E+++
Sbjct: 494 QELASQLAQFKVEMAEREERQQQVAEDYE--LRLAREQARVC----ELQSGNQQLEEQRV 547
Query: 394 MDYIDQRIHELQEHIDDKIALLLDLL--QNPNSPPTG 428
+ +++ LQ H D+ LL L NP +PP G
Sbjct: 548 -ELVERLQAMLQAHWDEANQLLSTTLPPPNPPAPPAG 583
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,164,900
Number of Sequences: 37866
Number of extensions: 843192
Number of successful extensions: 1718
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1682
Number of HSP's gapped (non-prelim): 69
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.