Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MMD2 Sequence: fasta or formatted (246aa) NCBI GI: 154759275
Description:

monocyte to macrophage differentiation-associated 2 isoform 2

Referenced in:

Adipose Tissue
Macrophages and Monocytes

Other entries for this name:
alt prot [270aa] monocyte to macrophage differentiation-associated 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         19           2
 C cysteine            2.0          5           1
 D aspartate           2.4          6           3
 E glutamate           3.7          9           1
 F phenylalanine       8.5         21           3
 G glycine             5.7         14           2
 H histidine           5.3         13           1
 I isoleucine          6.1         15           2
 K lysine              3.7          9           2
 L leucine            10.2         25           2
 M methionine          4.1         10           1
 N asparagine          2.0          5           1
 P proline             4.1         10           1
 Q glutamine           1.2          3           1
 R arginine            4.5         11           1
 S serine              6.1         15           2
 T threonine           4.9         12           1
 V valine              7.3         18           2
 W tryptophan          4.5         11           1
 Y tyrosine            6.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   monocyte to macrophage differentiation-associated 2... 
MMD2                  0.972   monocyte to macrophage differentiation-associated 2...
MMD                   0.676   monocyte to macrophage differentiation-associated pr...
CLEC17A               0.014   C-type lectin domain family 17, member A 
ADIPOR2               0.014   adiponectin receptor 2 
TAS2R9                0.010   taste receptor, type 2, member 9 
AGTR2                 0.008   angiotensin II receptor, type 2 
MAL                   0.008   T-lymphocyte maturation-associated protein isoform c...
SGMS1                 0.006   sphingomyelin synthase 1 
NXPH1                 0.006   neurexophilin 1 precursor 
SC4MOL                0.006   sterol-C4-methyl oxidase-like isoform 1 
NXPH2                 0.006   neurexophilin 2 
SGMS2                 0.006   sphingomyelin synthase 2 
SGMS2                 0.006   sphingomyelin synthase 2 
SGMS2                 0.006   sphingomyelin synthase 2 
ERVWE1                0.006   syncytin precursor 
ERVWE1                0.006   syncytin precursor 
STT3B                 0.006   source of immunodominant MHC-associated peptides [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press