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Search of human proteins with 15055549
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15055549 fibroblast growth factor 5 isoform 2 precursor
[Homo sapiens]
(123 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15055549 fibroblast growth factor 5 isoform 2 precursor [Homo... 247 2e-66
gi|73486655 fibroblast growth factor 5 isoform 1 precursor [Homo... 238 7e-64
gi|15147343 fibroblast growth factor 6 precursor [Homo sapiens] 52 1e-07
gi|4503701 fibroblast growth factor 4 precursor [Homo sapiens] 47 4e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 45 1e-05
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 39 0.001
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 39 0.001
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 39 0.001
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 38 0.002
gi|57864582 hornerin [Homo sapiens] 37 0.004
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 37 0.004
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 37 0.004
gi|49472835 bridging integrator 2 [Homo sapiens] 37 0.004
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 37 0.004
gi|60097902 filaggrin [Homo sapiens] 37 0.005
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 36 0.006
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 36 0.006
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 36 0.006
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 36 0.006
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 36 0.006
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 36 0.006
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 36 0.006
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 36 0.006
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 36 0.006
gi|112421108 capicua homolog [Homo sapiens] 36 0.008
gi|57546899 myeloid/lymphoid or mixed-lineage leukemia transloca... 35 0.011
gi|4757726 myeloid/lymphoid or mixed-lineage leukemia translocat... 35 0.011
gi|9789947 fibroblast growth factor 20 [Homo sapiens] 35 0.011
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 35 0.014
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 34 0.032
>gi|15055549 fibroblast growth factor 5 isoform 2 precursor [Homo
sapiens]
Length = 123
Score = 247 bits (630), Expect = 2e-66
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MSLSFLLLLFFSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSAS 60
MSLSFLLLLFFSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSAS
Sbjct: 1 MSLSFLLLLFFSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSAS 60
Query: 61 SSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHEANMLSQ 120
SSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHEANMLSQ
Sbjct: 61 SSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHEANMLSQ 120
Query: 121 VHR 123
VHR
Sbjct: 121 VHR 123
>gi|73486655 fibroblast growth factor 5 isoform 1 precursor [Homo
sapiens]
Length = 268
Score = 238 bits (608), Expect = 7e-64
Identities = 119/119 (100%), Positives = 119/119 (100%)
Query: 1 MSLSFLLLLFFSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSAS 60
MSLSFLLLLFFSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSAS
Sbjct: 1 MSLSFLLLLFFSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSAS 60
Query: 61 SSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHEANMLS 119
SSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHEANMLS
Sbjct: 61 SSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHEANMLS 119
>gi|15147343 fibroblast growth factor 6 precursor [Homo sapiens]
Length = 208
Score = 51.6 bits (122), Expect = 1e-07
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 40 NPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIGF 99
+P G+ + + + + S A L + +G+ S + +R LYC VGIGF
Sbjct: 38 SPAGTRANNTLLDSRGWGTLLSRSRAGLAGEIAGVNWES-GYLVGIKRQRRLYCNVGIGF 96
Query: 100 HLQIYPDGKVNGSHEANMLS 119
HLQ+ PDG+++G+HE N S
Sbjct: 97 HLQVLPDGRISGTHEENPYS 116
>gi|4503701 fibroblast growth factor 4 precursor [Homo sapiens]
Length = 206
Score = 47.0 bits (110), Expect = 4e-06
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 26 LAPKGQPGPAATDRNPRGSSSRQSSS--SAMSSSSASSSPAASLGSQGSGLEQSSFQWSP 83
LAP G AA P G+ + ++ + S + P A+ + + ++ + +
Sbjct: 20 LAPWAGRGGAAAPTAPNGTLEAELERRWESLVALSLARLPVAAQPKEAA-VQSGAGDYLL 78
Query: 84 SGRRTGSLYCRVGIGFHLQIYPDGKVNGSH 113
+R LYC VGIGFHLQ PDG++ G+H
Sbjct: 79 GIKRLRRLYCNVGIGFHLQALPDGRIGGAH 108
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 45.1 bits (105), Expect = 1e-05
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 31 QPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
+P PA R SSS SSSS+ SSSS+SSS ++S S S SS SPS + G
Sbjct: 2597 EPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPG 2655
Score = 40.4 bits (93), Expect = 3e-04
Identities = 25/53 (47%), Positives = 29/53 (54%)
Query: 32 PGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPS 84
P P R R SSS SSSS+ SSSS+SSS ++S S S SS S S
Sbjct: 2596 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Score = 38.9 bits (89), Expect = 0.001
Identities = 23/42 (54%), Positives = 27/42 (64%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSP 83
R SSS SSSS+ SSSS+SSS ++S GS S E SS P
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQP 2572
Score = 38.9 bits (89), Expect = 0.001
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 24 KRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSP 83
K +G+P + R SSS SSSS+ SSSS+SSS ++S S S SS S
Sbjct: 2587 KEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2646
Query: 84 S 84
S
Sbjct: 2647 S 2647
Score = 36.6 bits (83), Expect = 0.005
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 31 QPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGL 74
QP + SSS SSSS+ SSSS+SSS ++S S+GS L
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSL 2568
Score = 33.9 bits (76), Expect = 0.032
Identities = 22/56 (39%), Positives = 28/56 (50%)
Query: 27 APKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWS 82
A G P+A R SSSS+ SSSS+SSS ++S S SG S + S
Sbjct: 2511 ASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGS 2566
Score = 33.9 bits (76), Expect = 0.032
Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 28 PKGQPGPAATDRNPR------GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW 81
P P P R R R+SSSS+ SSSS+SSS ++S S S SS
Sbjct: 2580 PSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2639
Query: 82 SPSGRRTGS 90
S S + S
Sbjct: 2640 SSSSSSSSS 2648
Score = 31.6 bits (70), Expect = 0.16
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSP 83
+++ + SSS SSSS+ SSSS+SSS ++S S S S + P
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGP 2656
Score = 31.6 bits (70), Expect = 0.16
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPA-ASLGSQGSGLEQSSFQWSPSGRRTGS 90
+++ + SSS SSSS+ SSSS+SSSP+ A G Q S + P RR+ S
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRS 2677
Score = 31.2 bits (69), Expect = 0.21
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 24 KRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
KR +++ + SSS SSSS+ SSSS+SSS ++S S S
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Score = 30.4 bits (67), Expect = 0.35
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G+P + + P ++ Q + SSSS+SSS ++S S S SS S S
Sbjct: 2507 GEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGS 2566
Query: 90 SL 91
SL
Sbjct: 2567 SL 2568
Score = 30.4 bits (67), Expect = 0.35
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 20 AHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAAS 66
A ++R + +++ + SSS SSSS+ SSSS+SSS ++S
Sbjct: 2601 AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2647
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 27 APKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGR 86
+P P A + P + + + SSSS+SSS ++S S S SS S S
Sbjct: 2581 SPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640
Query: 87 RTGS 90
+ S
Sbjct: 2641 SSSS 2644
Score = 26.6 bits (57), Expect = 5.1
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 32 PGPAATDRNPR-GSSSRQSSSSAMSSSSASSSP-------AASLGSQGSGLEQSSFQWSP 83
P P A R R GSSS+ S SSS SSP A GS+ S ++ + P
Sbjct: 1627 PAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPP 1686
Query: 84 SGRRTGS 90
R + S
Sbjct: 1687 RRRSSRS 1693
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 38.9 bits (89), Expect = 0.001
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 34 PAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
PA++ + SSS SSSS+ SSSS+SSS ++S S S SS S S + S
Sbjct: 2612 PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2668
Score = 38.5 bits (88), Expect = 0.001
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 21 HGEKRLAPKGQPGPAATDR--NPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
+G+ G+ AA+ R +P SSS SSSS+ SSSS+SSS ++S S S SS
Sbjct: 2590 NGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2649
Query: 79 FQWSPSGRRTGS 90
S S + S
Sbjct: 2650 SSSSSSSSSSSS 2661
Score = 37.7 bits (86), Expect = 0.002
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 20 AHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSF 79
A + +P +++ + SSS SSSS+ SSSS+SSS ++S S S SS
Sbjct: 2604 AASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2663
Query: 80 QWSPSGRRT 88
S S T
Sbjct: 2664 SSSSSSSST 2672
Score = 37.4 bits (85), Expect = 0.003
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 22 GEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW 81
GE+ G G RN +SSR +S ++ SSSS+SSS ++S S S SS
Sbjct: 2583 GEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
Query: 82 SPSGRRTGS 90
S S + S
Sbjct: 2643 SSSSSSSSS 2651
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 32 PGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
P +++ + SSS SSSS+ SSSS+SSS ++S S S SS S S + S
Sbjct: 2612 PASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670
Score = 37.0 bits (84), Expect = 0.004
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
AA+ + SSS SSSS+ SSSS+SSS ++S S S SS S S + S
Sbjct: 2609 AASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2664
Score = 36.6 bits (83), Expect = 0.005
Identities = 25/69 (36%), Positives = 33/69 (47%)
Query: 22 GEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW 81
G A + A+ + SSS SSSS+ SSSS+SSS ++S S S SS
Sbjct: 2599 GRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2658
Query: 82 SPSGRRTGS 90
S S + S
Sbjct: 2659 SSSSSSSSS 2667
Score = 35.0 bits (79), Expect = 0.014
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
+++ + SSS SSSS+ SSSS+SSS ++S S S SS S S + S
Sbjct: 2616 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2671
Score = 35.0 bits (79), Expect = 0.014
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRT 88
+++ + SSS SSSS+ SSSS+SSS ++S S S SS S S T
Sbjct: 2620 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTT 2673
Score = 34.3 bits (77), Expect = 0.024
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 31 QPGPAAT---DRNPR----------GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS 77
+PGP T NP+ G+ +SSSS+ S SS+SSS ++S GS+ G E+
Sbjct: 2528 EPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEG-EEE 2586
Query: 78 SFQWSPSGRRTGSLYC 93
+ G TG C
Sbjct: 2587 GDKNGDGGCGTGGRNC 2602
Score = 32.7 bits (73), Expect = 0.071
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
+++ + SSS SSSS+ SSSS+SSS ++S S S ++ S
Sbjct: 2634 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDS 2677
Score = 32.3 bits (72), Expect = 0.093
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
+++ + SSS SSSS+ SSSS+SSS ++S S + E SS
Sbjct: 2635 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSS 2678
Score = 27.3 bits (59), Expect = 3.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
+++ + SSS SSSS+ SSSS+SSS S S ++++
Sbjct: 2643 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAA 2686
Score = 26.2 bits (56), Expect = 6.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 22 GEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSS 62
G + K Q + + SSS SSS+ SSSS+S S
Sbjct: 2539 GNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGS 2579
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 44 SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
SSS SSSS+ SSSS+SSSP++S G + S F+ S G
Sbjct: 458 SSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEG 499
Score = 35.8 bits (81), Expect = 0.008
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 23 EKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWS 82
E R G G +++ + SSS SSSS+ SSSS SSS S L + S + S
Sbjct: 441 ESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGS 500
Query: 83 PSGRRTGS 90
S +G+
Sbjct: 501 SSSGSSGA 508
Score = 31.6 bits (70), Expect = 0.16
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 36 ATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
A R+ RG S SSS + SSSS+SSS ++S S S
Sbjct: 440 AESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSS 476
Score = 30.0 bits (66), Expect = 0.46
Identities = 21/57 (36%), Positives = 26/57 (45%)
Query: 33 GPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G +++ + SSS SSSS+ SSSS S S E SS S RR G
Sbjct: 456 GSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGSSSSGSSGARREG 512
Score = 28.5 bits (62), Expect = 1.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 31 QPGPAATDRNPRGSSSRQS-SSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+P + ++RN + SR S SSS SSS ++S S S SS S SG
Sbjct: 427 EPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSG 482
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 44 SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
SSS SSSS+ SSSS+SSSP++S G + S F+ S G
Sbjct: 458 SSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEG 499
Score = 35.8 bits (81), Expect = 0.008
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 23 EKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWS 82
E R G G +++ + SSS SSSS+ SSSS SSS S L + S + S
Sbjct: 441 ESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGS 500
Query: 83 PSGRRTGS 90
S +G+
Sbjct: 501 SSSGSSGA 508
Score = 31.6 bits (70), Expect = 0.16
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 36 ATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
A R+ RG S SSS + SSSS+SSS ++S S S
Sbjct: 440 AESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSS 476
Score = 30.0 bits (66), Expect = 0.46
Identities = 21/57 (36%), Positives = 26/57 (45%)
Query: 33 GPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G +++ + SSS SSSS+ SSSS S S E SS S RR G
Sbjct: 456 GSSSSSSSSSSSSSSSSSSSSPSSSSGGESSETSSDLFEGSNEGSSSSGSSGARREG 512
Score = 28.5 bits (62), Expect = 1.3
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 31 QPGPAATDRNPRGSSSRQS-SSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+P + ++RN + SR S SSS SSS ++S S S SS S SG
Sbjct: 427 EPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSPSSSSG 482
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 37.7 bits (86), Expect = 0.002
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 33 GPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGSLY 92
G AA P SR + M++ S ++ PA GSG P LY
Sbjct: 113 GTAAPRAAPAARGSRPGPAGTMAAGSITTLPALPEDG-GSGAFPPGHFKDPK-----RLY 166
Query: 93 CRVGIGFHLQIYPDGKVNGSHE 114
C+ G GF L+I+PDG+V+G E
Sbjct: 167 CKNG-GFFLRIHPDGRVDGVRE 187
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 37.0 bits (84), Expect = 0.004
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G +++ GS SRQS S + SP+ S G GSG QSS +SP G +G
Sbjct: 1444 GSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS-SYSPYGSGSG 1502
Score = 37.0 bits (84), Expect = 0.004
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G +++ GS SRQS S + SP+ S G GSG QSS +SP G +G
Sbjct: 2384 GSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS-SYSPYGSGSG 2442
Score = 35.4 bits (80), Expect = 0.011
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G +++ GS SRQS S + SP+ S G GSG QSS + P G +G
Sbjct: 1914 GSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS-SYGPYGSGSG 1972
Score = 33.5 bits (75), Expect = 0.042
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRT 88
+G +++ GS SRQS + S + SP+ S G SG QSS + P G +
Sbjct: 507 QGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSS-SYGPHGYGS 565
Query: 89 G 89
G
Sbjct: 566 G 566
Score = 33.5 bits (75), Expect = 0.042
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G +++ GS SRQS S + SP+ S G GSG QSS
Sbjct: 974 GSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSS 1022
Score = 32.0 bits (71), Expect = 0.12
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQ------WS 82
+G ++ GS S QSSS S + SP+ GSG S Q WS
Sbjct: 1796 EGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWS 1855
Query: 83 PSGRRTGS 90
S R GS
Sbjct: 1856 SSSGRHGS 1863
Score = 32.0 bits (71), Expect = 0.12
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQ------WS 82
+G ++ GS S QSSS S + SP+ GSG S Q WS
Sbjct: 2266 EGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWS 2325
Query: 83 PSGRRTGS 90
S R GS
Sbjct: 2326 SSSGRHGS 2333
Score = 31.2 bits (69), Expect = 0.21
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGL-EQSSFQWSPSGRRTGSLYCRVGIG 98
RGS SRQS S S + S +S G GSGL E S F S S Y + G G
Sbjct: 1131 RGSGSRQSPSYGRHGSGSGRS--SSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSG 1186
Score = 31.2 bits (69), Expect = 0.21
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGL-EQSSFQWSPSGRRTGSLYCRVGIG 98
RGS SRQS S S + S +S G GSGL E S F S S Y + G G
Sbjct: 1601 RGSGSRQSPSYGRHGSGSGRS--SSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSG 1656
Score = 31.2 bits (69), Expect = 0.21
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGL-EQSSFQWSPSGRRTGSLYCRVGIG 98
RGS SRQS S S + S +S G GSGL E S F S S Y + G G
Sbjct: 2541 RGSGSRQSPSYGRHGSGSGRS--SSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSG 2596
Score = 31.2 bits (69), Expect = 0.21
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSF---QWSPSGR 86
G +++ GS SRQSS S + SP S G GSGL SS S SGR
Sbjct: 2620 GSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSP--SRGRHGSGLGHSSSHGQHGSGSGR 2677
Query: 87 RT--GSLYCRVGIGFHLQIYPDGKVNGSHEA 115
+ G R+G H ++ + H +
Sbjct: 2678 SSSRGPYESRLG---HSSVFGQHESGSGHSS 2705
Score = 30.4 bits (67), Expect = 0.35
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 17 SAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSS----SASSSPAASLGSQGS 72
S H E R G + + + S+S SSS ASS ++S G GS
Sbjct: 1048 SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGS 1107
Query: 73 GLEQSS---FQWSPSGRRTG 89
G QSS Q S SG+ G
Sbjct: 1108 GSSQSSGYGRQGSGSGQSPG 1127
Score = 30.4 bits (67), Expect = 0.35
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G +++ GS SRQSS S + SP S G GSGL SS
Sbjct: 1210 GSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSP--SRGRHGSGLGHSS 1256
Score = 30.4 bits (67), Expect = 0.35
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 17 SAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSS----SASSSPAASLGSQGS 72
S H E R G + + + S+S SSS ASS ++S G GS
Sbjct: 1518 SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGS 1577
Query: 73 GLEQSS---FQWSPSGRRTG 89
G QSS Q S SG+ G
Sbjct: 1578 GSSQSSGYGRQGSGSGQSPG 1597
Score = 30.4 bits (67), Expect = 0.35
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G +++ GS SRQSS S + SP S G GSGL SS
Sbjct: 1680 GSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSP--SRGRHGSGLGHSS 1726
Score = 30.4 bits (67), Expect = 0.35
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 17 SAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSS----SASSSPAASLGSQGS 72
S H E R G + + + S+S SSS ASS ++S G GS
Sbjct: 1988 SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHGS 2047
Query: 73 GLEQSS---FQWSPSGRRTG 89
G QSS Q S SG+ G
Sbjct: 2048 GSSQSSGYGRQGSGSGQSPG 2067
Score = 30.4 bits (67), Expect = 0.35
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 30 GQPGPAATDRNP---RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS-SFQWSPSG 85
GQ G A+ + G+SS QSSS S +S S + G QGSG QS SG
Sbjct: 2017 GQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQS--SGYGRQGSGSGQSPGHGQRGSG 2074
Query: 86 RRTGSLYCRVGIG 98
R Y R G G
Sbjct: 2075 SRQSPSYGRHGSG 2087
Score = 30.4 bits (67), Expect = 0.35
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 17 SAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSS----SASSSPAASLGSQGS 72
S H E R G + + + S+S SSS ASS ++S G GS
Sbjct: 2458 SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGS 2517
Query: 73 GLEQSS---FQWSPSGRRTG 89
G QSS Q S SG+ G
Sbjct: 2518 GSSQSSGYGRQGSGSGQSPG 2537
Score = 30.0 bits (66), Expect = 0.46
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 22 GEKRLAPKGQPGPA---ATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G + +GQ G A+ GSSSRQSSS S++ S S GSG
Sbjct: 367 GSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGH 426
Query: 79 FQ-WSPSGRRTGSLYCRVGIG 98
Q S SG+ S G G
Sbjct: 427 GQRGSGSGQSPSSGQHGTGFG 447
Score = 29.6 bits (65), Expect = 0.60
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS-SFQWSPSGRRTGSLYCRVGIG 98
G+SS QSSS S +S S + G QGSG QS SG R Y R G G
Sbjct: 1093 GASSGQSSSHGQHGSGSSQS--SGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSG 1147
Score = 29.6 bits (65), Expect = 0.60
Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQ------WSPSGRRTGS 90
RGS S QSS + + SP+ GSG S Q WS S R GS
Sbjct: 1339 RGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGS 1393
Score = 29.6 bits (65), Expect = 0.60
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS-SFQWSPSGRRTGSLYCRVGIG 98
G+SS QSSS S +S S + G QGSG QS SG R Y R G G
Sbjct: 1563 GASSGQSSSHGQHGSGSSQS--SGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSG 1617
Score = 29.6 bits (65), Expect = 0.60
Identities = 18/61 (29%), Positives = 24/61 (39%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
G +++ GS SRQSS S + SP+ GSG S Q R+
Sbjct: 2150 GSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSS 2209
Query: 90 S 90
S
Sbjct: 2210 S 2210
Score = 29.6 bits (65), Expect = 0.60
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS-SFQWSPSGRRTGSLYCRVGIG 98
G+SS QSSS S +S S + G QGSG QS SG R Y R G G
Sbjct: 2503 GASSGQSSSHGQHGSGSSQS--SGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSG 2557
Score = 29.3 bits (64), Expect = 0.79
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGL-EQSSFQWSPSGRRTGSLYCRVGIG 98
RGS SRQS S S + S +S G G GL E S F S S Y + G G
Sbjct: 2071 RGSGSRQSPSYGRHGSGSGRS--SSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSG 2126
Score = 28.9 bits (63), Expect = 1.0
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 30 GQPGPAATDRNPRG---SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGR 86
GQ G ++ + G S+SR SS SS + SP GSG SS Q
Sbjct: 388 GQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFG 447
Query: 87 RTGS 90
R+ S
Sbjct: 448 RSSS 451
Score = 28.5 bits (62), Expect = 1.3
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 30 GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGS--QGSGLEQSSFQWSPSGRR 87
GQ G + + ++ RG R SS S+ S S SLG QGSG QS PS R
Sbjct: 258 GQHG-SRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQS-----PSHVR 311
Query: 88 TGS 90
GS
Sbjct: 312 HGS 314
Score = 28.1 bits (61), Expect = 1.8
Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS 77
GS S QSS SSA SS +S G GSG QS
Sbjct: 495 GSRSGQSSRGERQGSSAGSS--SSYGQHGSGSRQS 527
Score = 28.1 bits (61), Expect = 1.8
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 17 SAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSS----SASSSPAASLGSQGS 72
S H E R G + + + S+S SSS A+S ++S G GS
Sbjct: 582 SGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGS 641
Query: 73 GLEQSS 78
G QSS
Sbjct: 642 GSSQSS 647
Score = 28.1 bits (61), Expect = 1.8
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 39 RNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
R+ + S S Q SS+ SSS + S S G G + S SPS R GS
Sbjct: 732 RSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGS 783
Score = 28.1 bits (61), Expect = 1.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 36 ATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQ-WSPSGRRTG 89
A+ R GS S QS S + SP+ GSG SS + S SG+ +G
Sbjct: 877 ASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSG 931
Score = 27.7 bits (60), Expect = 2.3
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
G++S QSSS S +S S + G QGSG Q SPS R GS
Sbjct: 627 GATSGQSSSHGQHGSGSSQS--SRYGQQGSGSGQ-----SPSRGRHGS 667
Score = 27.7 bits (60), Expect = 2.3
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
GS S QSS S SS+ S +S G GSG QSS
Sbjct: 730 GSRSGQSSRSEQHGSSSGLS--SSYGQHGSGSHQSS 763
Score = 27.7 bits (60), Expect = 2.3
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 22 GEKRLAPKGQPGPAATDRNPRG---SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G R + GQ GP + + G SSS QSSS S + S ++ G GS QSS
Sbjct: 2087 GSGRSSSSGQHGPGLGESSGFGHHESSSGQSSS--YSQHGSGSGHSSGYGQHGSRSGQSS 2144
Query: 79 FQWSPSGRRTGS 90
G R GS
Sbjct: 2145 -----RGERHGS 2151
Score = 27.3 bits (59), Expect = 3.0
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
GS+S QSS+ SS S +S G +GSG QSS
Sbjct: 1314 GSTSGQSSTFDQEGSSTGQS--SSYGHRGSGSSQSS 1347
Score = 27.3 bits (59), Expect = 3.0
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 16/59 (27%)
Query: 43 GSSSRQSS------SSAMSSSS-----ASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GS+S QSS SS SSS + SS ++S G QGSG Q SPS R GS
Sbjct: 1784 GSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQ-----SPSRGRHGS 1837
Score = 27.3 bits (59), Expect = 3.0
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 16/59 (27%)
Query: 43 GSSSRQSS------SSAMSSSS-----ASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GS+S QSS SS SSS + SS ++S G QGSG Q SPS R GS
Sbjct: 2254 GSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQ-----SPSRGRHGS 2307
Score = 27.3 bits (59), Expect = 3.0
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 22 GEKRLAPKGQPGPAATDRNP---RGSSSRQSSS-----SAMSSSS------ASSSPAASL 67
G +GQ G + + GSS+ QSSS S S SS A S + S
Sbjct: 2713 GSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSH 2772
Query: 68 GSQGSGLEQ-SSFQWSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHE 114
G GSG Q SS+ SG S Y + G G Y K +H+
Sbjct: 2773 GRHGSGSGQSSSYGQHGSGSGQSSGYSQHGSGSGQDGYSYCKGGSNHD 2820
Score = 26.9 bits (58), Expect = 3.9
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 39 RNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
R+ + S S Q SS+ SSSS + S S G G S SPS R
Sbjct: 963 RSGQSSRSEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSR 1011
Score = 26.9 bits (58), Expect = 3.9
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 39 RNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
R+ + S + SS+ SSS + S S G G + S SPS R GS
Sbjct: 1669 RSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGS 1720
Score = 26.9 bits (58), Expect = 3.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSP 83
+GS S QS S + SP+ GSG SS Q P
Sbjct: 2058 QGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGP 2099
Score = 26.9 bits (58), Expect = 3.9
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 19/85 (22%)
Query: 42 RGSSSRQSSS----SAMSSSSAS-------SSPAASLGSQGSGLEQSS--FQWSPSGRRT 88
RGS S QSS A S S S S ++S G GSG QSS Q +
Sbjct: 2749 RGSGSSQSSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQHGSGSGQSSGYSQHGSGSGQD 2808
Query: 89 GSLYCRVGIGFHLQIYPDGKVNGSH 113
G YC+ G DG +GS+
Sbjct: 2809 GYSYCKGGSNH------DGGSSGSY 2827
Score = 26.6 bits (57), Expect = 5.1
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCRVGIG 98
RGS S QS S S + S +S G GSG QSS S S Y + G G
Sbjct: 896 RGSGSGQSPSYGRHGSGSGRS--SSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSG 950
Score = 26.2 bits (56), Expect = 6.7
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
+GS SRQS S S + S +S G GSG SS+ +S +GS
Sbjct: 299 QGSGSRQSPSHVRHGSGSGHS--SSHGQHGSG---SSYSYSRGHYESGS 342
Score = 26.2 bits (56), Expect = 6.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
+ SSS Q SS+ SSS +AS + G G S SP + GS
Sbjct: 850 QSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGS 898
Score = 26.2 bits (56), Expect = 6.7
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW--------SPSGRRTGS 90
GS S QSS SS+ SS + G GSG QSS SPS R GS
Sbjct: 1197 GSRSGQSSRGERHGSSSGSS--SHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGS 1250
Score = 26.2 bits (56), Expect = 6.7
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Query: 22 GEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW 81
G ++ GQ G + + ++P S R S S SSS + + S E S
Sbjct: 1459 GSRQSLGHGQHG-SGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHS 1517
Query: 82 SPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSH 113
S G R G G H +G H
Sbjct: 1518 SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQH 1549
Score = 26.2 bits (56), Expect = 6.7
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW--------SPSGRRTGS 90
GS S QSS SS+ SS + G GSG QSS SPS R GS
Sbjct: 2137 GSRSGQSSRGERHGSSSGSS--SRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGS 2190
Score = 26.2 bits (56), Expect = 6.7
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW--------SPSGRRTGS 90
GS S QSS SS+ SS + G GSG QSS SPS R GS
Sbjct: 2607 GSRSGQSSRGERHGSSSGSS--SHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGS 2660
Score = 25.8 bits (55), Expect = 8.7
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS---FQWSPSGRRTG 89
+ S S QSS S + SP + G GSG QSS S SG+ +G
Sbjct: 182 QNSDSHQSSGRGQCGSGSGQSP--NYGQHGSGSGQSSSNDTHGSGSGQSSG 230
Score = 25.8 bits (55), Expect = 8.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
GS S QSS SS+ SS + G GSG QSS
Sbjct: 1667 GSRSGQSSRGERHGSSSRSS--SRYGQHGSGSRQSS 1700
Score = 25.8 bits (55), Expect = 8.7
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 22 GEKRLAPKGQPGPAA---TDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G + + GQ G + R GS S SSS S + S +S G GSG QSS
Sbjct: 1812 GSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWS--SSSGRHGSGSGQSS 1869
Query: 79 -FQWSPSGRRTGSLYCRVGIG 98
F S S Y + G G
Sbjct: 1870 GFGHHESSSWQSSGYTQHGSG 1890
Score = 25.8 bits (55), Expect = 8.7
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 22 GEKRLAPKGQPGPAA---TDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
G + + GQ G + R GS S SSS S + S +S G GSG QSS
Sbjct: 2282 GSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWS--SSSGRHGSGSGQSS 2339
Query: 79 -FQWSPSGRRTGSLYCRVGIG 98
F S S Y + G G
Sbjct: 2340 GFGHHESSSWQSSGYTQHGSG 2360
Score = 25.8 bits (55), Expect = 8.7
Identities = 23/92 (25%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Query: 22 GEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQW 81
G ++ GQ G + + ++P S R S S SSS + + S E S
Sbjct: 2399 GSRQSLGHGQHG-SGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHS 2457
Query: 82 SPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSH 113
S G R G G H +G H
Sbjct: 2458 SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQH 2489
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 37.0 bits (84), Expect = 0.004
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 21 HGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQ 80
H E + K + RN S +SSSS+ SSSS++SS + S S GS +SS
Sbjct: 549 HPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSS 608
Query: 81 WSPS 84
S S
Sbjct: 609 SSSS 612
Score = 36.2 bits (82), Expect = 0.006
Identities = 24/60 (40%), Positives = 30/60 (50%)
Query: 25 RLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPS 84
R +G+ + R SSS SSSS+ SSSS SSS + S S+ S SS S S
Sbjct: 559 RSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSS 618
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 15 ILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGL 74
+L+ + + + + A ++ + S SSSS+ SSS++SSS ++S S
Sbjct: 545 VLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSR 604
Query: 75 EQSSFQWSPSG 85
SS S SG
Sbjct: 605 SSSSSSSSTSG 615
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRT 88
R +S+ S S+ SSSS+SSS ++S GS S SS S S T
Sbjct: 567 RNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSST 613
Score = 32.0 bits (71), Expect = 0.12
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 44 SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
SSS SSSS+ SSSS SSS ++S S S + SS S S R+ S
Sbjct: 589 SSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRS 635
Score = 31.6 bits (70), Expect = 0.16
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTG 89
GSSS SSS+ SSSS+SSS + S S SS + R G
Sbjct: 593 GSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRG 639
Score = 30.8 bits (68), Expect = 0.27
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 37 TDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
T ++ SSS SSSS+ +SSS+ SS ++ S S SS S R + S
Sbjct: 570 TSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSS 623
Score = 30.0 bits (66), Expect = 0.46
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 25 RLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPS 84
R + ++T + SSS SSSS SSSS+SS+ +S S SS S S
Sbjct: 576 RSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRS 635
Query: 85 GRR 87
R
Sbjct: 636 RGR 638
Score = 30.0 bits (66), Expect = 0.46
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 44 SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
SSS +SSS+ SSSS+ SS + S S S SS + S S + S
Sbjct: 583 SSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSS 629
Score = 28.1 bits (61), Expect = 1.8
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 33 GPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSG 73
G +++ + SSS SSS SSSS SSS + S+G G
Sbjct: 599 GSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRG 639
Score = 27.7 bits (60), Expect = 2.3
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRT 88
+++ + SS SSS + SS S+SSS +++ GS S+ S S R+
Sbjct: 582 SSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRS 635
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 37.0 bits (84), Expect = 0.004
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 31 QPGPAATDRNP----RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS-------SF 79
QPG A RN R SSS SSS++ +SSS SSS ++S +G G +S S
Sbjct: 361 QPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSR 420
Query: 80 QWSPSGRRT 88
WS S R+
Sbjct: 421 SWSRSRSRS 429
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 37.0 bits (84), Expect = 0.004
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 23 EKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWS 82
++ AP +P P +PR SS SS S + +SP ASLG+ G+ ++S + S
Sbjct: 408 QRTSAPPSRPPPPRATASPRPSSGNIPSSPTASGGGSPTSPRASLGT-GTASPRTSLEVS 466
Query: 83 PS 84
P+
Sbjct: 467 PN 468
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 37.0 bits (84), Expect = 0.004
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGR 86
AA P GS+S SSS A SSSS+SSSP ASL + L++++ + S R
Sbjct: 855 AAPPHCPGGSAS-PSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNR 905
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 36.6 bits (83), Expect = 0.005
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGR 86
+GQ A +DR RGSS Q+S S S ++ + + G +GL Q S Q S GR
Sbjct: 402 RGQASSAVSDRGHRGSSGSQASDSEGHSENSDTQSVSGHGK--AGLRQQSHQESTRGR 457
Score = 30.4 bits (67), Expect = 0.35
Identities = 19/49 (38%), Positives = 23/49 (46%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS 77
+GQ T RN S S+ S S S S S +AS +GS EQS
Sbjct: 3523 QGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHRGSAQEQS 3571
Score = 30.0 bits (66), Expect = 0.46
Identities = 19/49 (38%), Positives = 22/49 (44%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS 77
+GQ T RN S S+ S S S S S +AS GS EQS
Sbjct: 605 QGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHHGSAQEQS 653
Score = 29.3 bits (64), Expect = 0.79
Identities = 19/49 (38%), Positives = 22/49 (44%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS 77
+GQ T RN S S+ S S S S S +AS GS EQS
Sbjct: 1902 QGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHLGSAWEQS 1950
Score = 28.9 bits (63), Expect = 1.0
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 27 APKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQS 77
A +GQ + T R S S+ S S S S S +AS +GS EQS
Sbjct: 928 AGQGQSEGSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSAQEQS 978
Score = 28.5 bits (62), Expect = 1.3
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 28 PKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
P+GQ A D GSS Q+S S S + + + G +G Q S Q S R
Sbjct: 3319 PRGQASSAVRDSRHWGSSGSQASDSEGHSEESDTQSVSGHGQ--AGPHQQSHQESARDRS 3376
Query: 88 TG 89
G
Sbjct: 3377 GG 3378
Score = 27.7 bits (60), Expect = 2.3
Identities = 28/94 (29%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQ--------SSFQ 80
+GQ T RN S S+ S S S S S +AS GS EQ S Q
Sbjct: 2551 QGQSEGPRTSRNWGSSFSQDSDSQGHSEDSERWSGSASRNHHGSAQEQLRDGSRHPRSHQ 2610
Query: 81 WSPSGRRTGSLYCRVGIGFHLQIYPDGKVNGSHE 114
+G + R H Q G+ SHE
Sbjct: 2611 EDRAGHGHSADSSRQSGTRHTQTSSGGQAASSHE 2644
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
Score = 27.7 bits (60), Expect = 2.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 13 HLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSS-SAMSSSSASSSPAASLGS 69
H S + R + G + + + GSSS +SS S SS+S SSS ++S GS
Sbjct: 66 HSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGS 123
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
Score = 27.7 bits (60), Expect = 2.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 13 HLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSS-SAMSSSSASSSPAASLGS 69
H S + R + G + + + GSSS +SS S SS+S SSS ++S GS
Sbjct: 66 HSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGS 123
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
Score = 27.7 bits (60), Expect = 2.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 13 HLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSS-SAMSSSSASSSPAASLGS 69
H S + R + G + + + GSSS +SS S SS+S SSS ++S GS
Sbjct: 66 HSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGS 123
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
Score = 27.7 bits (60), Expect = 2.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 13 HLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSS-SAMSSSSASSSPAASLGS 69
H S + R + G + + + GSSS +SS S SS+S SSS ++S GS
Sbjct: 66 HSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGS 123
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 24 KRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
K L G P + + SSS SSSS+ SSSS+SSS ++S S S SS
Sbjct: 134 KLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 188
Score = 34.3 bits (77), Expect = 0.024
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 38 DRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPS 84
+R+ SSS SSSS+ SSSS+SSS ++S S S SS S S
Sbjct: 143 NRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 189
Score = 34.3 bits (77), Expect = 0.024
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSF 79
+++ + SSS SSSS+ SSSS+SSS ++S S S +SF
Sbjct: 149 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSF 193
Score = 33.9 bits (76), Expect = 0.032
Identities = 24/61 (39%), Positives = 30/61 (49%)
Query: 24 KRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSP 83
+R K P + SSS SSSS+ SSSS+SSS ++S S S SS S
Sbjct: 132 RRKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 191
Query: 84 S 84
S
Sbjct: 192 S 192
Score = 33.5 bits (75), Expect = 0.042
Identities = 23/54 (42%), Positives = 28/54 (51%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRT 88
A D N +S SSSS+ SSSS+SSS ++S S S SS S S T
Sbjct: 138 AGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSST 191
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 11 FSHLILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQ 70
F +L A + + +++ + SSS SSSS+ SSSS+SSS ++S S
Sbjct: 131 FRRKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 190
Query: 71 GS 72
S
Sbjct: 191 TS 192
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 40 NPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCR 94
+P S SSSS+ SSSS+SSS ++S S S SS S S + + + +
Sbjct: 141 DPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSK 195
Score = 30.0 bits (66), Expect = 0.46
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQ 76
+++ + SSS SSSS+ SSSS+SSS ++S S + +
Sbjct: 154 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSK 195
Score = 29.3 bits (64), Expect = 0.79
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
G +R +S+ SSSS+SSS ++S S S SS S S + S
Sbjct: 140 GDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Score = 28.9 bits (63), Expect = 1.0
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 21 HGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQ 80
H + +++ + SSS SSSS+ SSSS+SSS + S +++ +
Sbjct: 147 HTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEK 206
Query: 81 WSPSGRRTGSLY 92
S R S +
Sbjct: 207 PSKDSREHKSAF 218
Score = 27.3 bits (59), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
G +S ++ SSSS+SSS ++S S S SS S S + S
Sbjct: 139 GGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 186
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.006
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRR 87
GSS+ SSS SSSSASS +S S+ S SS SPS RR
Sbjct: 86 GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRR 130
Score = 32.3 bits (72), Expect = 0.093
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSG 85
+++ R+ S+S SS++ SSS SSS +AS S S +SS S SG
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 32.3 bits (72), Expect = 0.093
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS SSSSA S S +SS+ +S S SG S + + RR+ S
Sbjct: 92 GSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Score = 32.0 bits (71), Expect = 0.12
Identities = 20/48 (41%), Positives = 26/48 (54%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
GSSS +S SS+ SSS +S+S +S GS S S S S + S
Sbjct: 71 GSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSS 118
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 35.8 bits (81), Expect = 0.008
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 11 FSHLILSAWAHGEKRLAPK--GQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLG 68
FS +I S++ H L P+ G P P GS+ SS+S+ +SSSAS++ + SLG
Sbjct: 495 FSPVIRSSFTHCRPPLDPEPPGPPDPPVAFGKGYGSAP-SSSASSPASSSASAATSFSLG 553
Query: 69 SQGSGLEQSSFQWSPSG 85
S G+ Q S Q S +G
Sbjct: 554 S-GTFKAQESGQGSTAG 569
>gi|57546899 myeloid/lymphoid or mixed-lineage leukemia translocated
to, 10 isoform b [Homo sapiens]
Length = 1011
Score = 35.4 bits (80), Expect = 0.011
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 23 EKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWS 82
E+ + K + G + P ++ + S +S+SP +S+ S + SS Q S
Sbjct: 460 EETVKEKKRKGNKQSKHGPGRPKGNKNQENVSHLSVSSASPTSSVASAAGSITSSSLQKS 519
Query: 83 PSGRRTGSLY------CRVGIGFHLQIYPDGKVNGSHEANMLSQVH 122
P+ R GSL VG +Q DG + + +L+ +H
Sbjct: 520 PTLLRNGSLQSLSVGSSPVGSEISMQYRHDGACPTTTFSELLNAIH 565
Score = 28.5 bits (62), Expect = 1.3
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 17 SAWAHGEKRLAPKGQPGPAAT----DRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
SA + G++ P G P T P+GS S S SS S+ SP L S
Sbjct: 321 SAHSSGQRGRKPGGGRNPGTTVSAASPFPQGSFSGTPGSVKSSSGSSVQSPQDFLSFTDS 380
Query: 73 GLEQSSFQWSPSGRRTGSLY 92
L S+ S T ++
Sbjct: 381 DLRNDSYSHSQQSSATKDVH 400
>gi|4757726 myeloid/lymphoid or mixed-lineage leukemia translocated
to, 10 isoform a [Homo sapiens]
Length = 1027
Score = 35.4 bits (80), Expect = 0.011
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 23 EKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWS 82
E+ + K + G + P ++ + S +S+SP +S+ S + SS Q S
Sbjct: 460 EETVKEKKRKGNKQSKHGPGRPKGNKNQENVSHLSVSSASPTSSVASAAGSITSSSLQKS 519
Query: 83 PSGRRTGSLY------CRVGIGFHLQIYPDGKVNGSHEANMLSQVH 122
P+ R GSL VG +Q DG + + +L+ +H
Sbjct: 520 PTLLRNGSLQSLSVGSSPVGSEISMQYRHDGACPTTTFSELLNAIH 565
Score = 28.5 bits (62), Expect = 1.3
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 17 SAWAHGEKRLAPKGQPGPAAT----DRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
SA + G++ P G P T P+GS S S SS S+ SP L S
Sbjct: 321 SAHSSGQRGRKPGGGRNPGTTVSAASPFPQGSFSGTPGSVKSSSGSSVQSPQDFLSFTDS 380
Query: 73 GLEQSSFQWSPSGRRTGSLY 92
L S+ S T ++
Sbjct: 381 DLRNDSYSHSQQSSATKDVH 400
>gi|9789947 fibroblast growth factor 20 [Homo sapiens]
Length = 211
Score = 35.4 bits (80), Expect = 0.011
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 87 RTGSLYCRVGIGFHLQIYPDGKVNGSHEANML 118
R LYCR G FHLQI PDG V G+ + + L
Sbjct: 65 RRRQLYCRTG--FHLQILPDGSVQGTRQDHSL 94
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 35.0 bits (79), Expect = 0.014
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
+ P P T+R+ + + R SSS+ SSSS+SSS ++S S S
Sbjct: 176 EASPSPCITERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSS 219
Score = 26.2 bits (56), Expect = 6.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 29 KGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRT 88
K P A + +P + +S A + +SSS ++S S S SS S GR+
Sbjct: 168 KASTAPGA-EASPSPCITERSKQKARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKK 226
Query: 89 GSLY 92
Y
Sbjct: 227 RGKY 230
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 33.9 bits (76), Expect = 0.032
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 43 GSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGSLYCR 94
GSSS SSS + +SSS+SSS ++S S S E+S + +R + + +
Sbjct: 2162 GSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEEAQKRESTTHMK 2213
Score = 31.2 bits (69), Expect = 0.21
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 20 AHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSF 79
A + R+ +G + +D + SS SSS+ SSSS S S + S S S +S
Sbjct: 2117 ASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASS 2176
Query: 80 QWSPSGRRTGS 90
S S + S
Sbjct: 2177 SSSSSTSSSSS 2187
Score = 30.4 bits (67), Expect = 0.35
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 42 RGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
R SS SSSS S+SS+SSS +S S S + S
Sbjct: 2160 RSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEES 2196
Score = 30.0 bits (66), Expect = 0.46
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 44 SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSS 78
S S SSSS+ S SSASSS ++S S S SS
Sbjct: 2159 SRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSS 2193
Score = 29.6 bits (65), Expect = 0.60
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 39 RNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGS 72
R+ SSS S SSA SSSS+S+S ++S S S
Sbjct: 2160 RSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSS 2193
Score = 29.3 bits (64), Expect = 0.79
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 35 AATDRNPRGSSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPS 84
+ + R+ SSS S S SSS+SSS +S S S SS S S
Sbjct: 2142 SCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSS 2191
Score = 28.9 bits (63), Expect = 1.0
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 44 SSSRQSSSSAMSSSSASSSPAASLGSQGSGLEQSSFQWSPSGRRTGS 90
SSS SSSS S S SSS ++S S S SS S S + S
Sbjct: 2147 SSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSS 2193
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.125 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,186,548
Number of Sequences: 37866
Number of extensions: 248051
Number of successful extensions: 5295
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 2650
Number of HSP's gapped (non-prelim): 1681
length of query: 123
length of database: 18,247,518
effective HSP length: 89
effective length of query: 34
effective length of database: 14,877,444
effective search space: 505833096
effective search space used: 505833096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.