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Search of human proteins with 149589008
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149589008 peptidase D [Homo sapiens]
(493 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149589008 peptidase D [Homo sapiens] 1011 0.0
gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putati... 161 1e-39
gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, solubl... 48 2e-05
gi|93141226 X-prolyl aminopeptidase 2, membrane-bound [Homo sapi... 43 7e-04
gi|45593147 EGF-like-domain, multiple 9 [Homo sapiens] 38 0.024
gi|45545431 EGF-like-domain, multiple 9 [Homo sapiens] 38 0.024
gi|40385867 methionine aminopeptidase 1D [Homo sapiens] 37 0.054
gi|45545429 estrogen-related receptor gamma isoform 2 [Homo sapi... 32 1.3
gi|45545427 estrogen-related receptor gamma isoform 2 [Homo sapi... 32 1.3
gi|45545433 estrogen-related receptor gamma isoform 1 [Homo sapi... 32 1.3
gi|197209821 estrogen-related receptor gamma isoform 2 [Homo sap... 32 1.3
gi|21361370 brain glycogen phosphorylase [Homo sapiens] 32 1.7
gi|71037379 liver glycogen phosphorylase [Homo sapiens] 31 2.3
gi|238550159 estrogen-related receptor beta [Homo sapiens] 30 5.0
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 30 5.0
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 30 5.0
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 30 5.0
gi|134304851 glutamate receptor, ionotropic, AMPA 2 isoform 3 [H... 29 8.6
gi|134304848 glutamate receptor, ionotropic, AMPA 2 isoform 2 pr... 29 8.6
gi|74275354 glutamate receptor, ionotropic, AMPA 2 isoform 1 pre... 29 8.6
>gi|149589008 peptidase D [Homo sapiens]
Length = 493
Score = 1011 bits (2614), Expect = 0.0
Identities = 493/493 (100%), Positives = 493/493 (100%)
Query: 1 MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTD 60
MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTD
Sbjct: 1 MAAATGPSFWLGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTD 60
Query: 61 TGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEK 120
TGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEK
Sbjct: 61 TGVLFRQESFFHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEK 120
Query: 121 YAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEI 180
YAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEI
Sbjct: 121 YAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGSVCREASFDGISKFEVNNTILHPEI 180
Query: 181 VECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSS 240
VECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSS
Sbjct: 181 VECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSS 240
Query: 241 YTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTA 300
YTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTA
Sbjct: 241 YTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTA 300
Query: 301 DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLG 360
DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLG
Sbjct: 301 DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLG 360
Query: 361 AVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDH 420
AVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDH
Sbjct: 361 AVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDH 420
Query: 421 LLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMA 480
LLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMA
Sbjct: 421 LLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMA 480
Query: 481 GCDKAFTPFSGPK 493
GCDKAFTPFSGPK
Sbjct: 481 GCDKAFTPFSGPK 493
>gi|11559925 X-prolyl aminopeptidase (aminopeptidase P) 3, putative
[Homo sapiens]
Length = 507
Score = 161 bits (407), Expect = 1e-39
Identities = 137/468 (29%), Positives = 215/468 (45%), Gaps = 53/468 (11%)
Query: 23 FALNRQRLCERLRKNPAVQAGS---IVVLQGGEETQRYCTDTGVLFRQESFFHWAFGVTE 79
+AL R +L ++K Q+G+ +VVL T D F Q++ F + G E
Sbjct: 72 YALRRHKLMSLIQKEAQGQSGTDQTVVVLSN--PTYYMSNDIPYTFHQDNNFLYLCGFQE 129
Query: 80 PGCYGVIDVDTGK------STLFVPRLPASHATWMGKIHSKEHFKEKYAVDDVQYVDEIA 133
P V+ GK + LFVPR S W G + VD+ ++E
Sbjct: 130 PDSILVLQSLPGKQLPSHKAILFVPRRDPSRELWDGPRSGTDGAIALTGVDEAYTLEEFQ 189
Query: 134 SVLTSQKPSVLLT----LRGVNTDSGSVCREASFDGISKFEVNNTILHPEIVECRVFKTD 189
+L K + +R + S + + +K + + I R+ K+
Sbjct: 190 HLLPKMKAETNMVWYDWMRPSHAQLHSDYMQPLTEAKAKSKNKVRGVQQLIQRLRLIKSP 249
Query: 190 MELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGE 249
E+E ++ K++S+A E M K ++E L + FE C +RG +Y + G
Sbjct: 250 AEIERMQIAGKLTSQAFIETMFTSKAPVEEAFLYAKFEFECRARGA-DILAYPPVVAGGN 308
Query: 250 NSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAV 309
S LHY N++ I++G+M L D G E C+ SDIT ++P NG+FTA Q +YEAV
Sbjct: 309 RSNTLHY----VKNNQLIKDGEMVLLDGGCESSCYVSDITRTWPVNGRFTAPQAELYEAV 364
Query: 310 LRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLG 369
L R + PG +++ + + ++L +GI+ ++ + PH +G
Sbjct: 365 LEIQRDCLALCFPGTSLENIYSMMLTLIGQKLKDLGIMK-NIKENNAFKAARKYCPHHVG 423
Query: 370 HFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADP 429
H+LG+DVHD P RSL LQPGMV+T+EPGIY +
Sbjct: 424 HYLGMDVHDTPDMP-----------RSL----PLQPGMVITIEPGIYIPED--------- 459
Query: 430 ARASFLNREVLQRFRGFGGVRIEEDVVVT-DSGIELLTCVPRTVEEIE 476
+++ ++FRG GVRIE+DVVVT DS + L P+ + +IE
Sbjct: 460 ------DKDAPEKFRGL-GVRIEDDVVVTQDSPLILSADCPKEMNDIE 500
>gi|21359929 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
[Homo sapiens]
Length = 623
Score = 47.8 bits (112), Expect = 2e-05
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 214 KVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMC 273
K G+ E E + + S+ I +G N A++HY N RT+ ++
Sbjct: 354 KGGVTEISAADKAEEFRRQQADFVDLSFPTISSTGPNGAIIHYAPVPETN-RTLSLDEVY 412
Query: 274 LFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLA 333
L D G +Y +D+T + G TA +K + VL+ AV A+ P
Sbjct: 413 LIDSGAQYKDGTTDVTRTMHF-GTPTAYEKECFTYVLKGHIAVSAAVFP---------TG 462
Query: 334 DRIH-LEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLG--IDVHDVGGYPEGVER-- 388
+ H L+ A + +D + HG GH +G ++VH+ P G+
Sbjct: 463 TKGHLLDSFARSALWDSGLDYL-----------HGTGHGVGSFLNVHE---GPCGISYKT 508
Query: 389 -IDEPGLRSLRTARHLQPGMVLTVEPGIY 416
DEP L+ GM++T EPG Y
Sbjct: 509 FSDEP----------LEAGMIVTDEPGYY 527
>gi|93141226 X-prolyl aminopeptidase 2, membrane-bound [Homo
sapiens]
Length = 674
Score = 42.7 bits (99), Expect = 7e-04
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 240 SYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFT 299
S+ I SG N+A+ HY N R + + +M L D GG+Y+ +DIT + G +
Sbjct: 415 SFETISASGLNAALAHYSPTKELN-RKLSSDEMYLLDSGGQYWDGTTDITRTVHW-GTPS 472
Query: 300 ADQKAVYEAVLRS----SRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMV 355
A QK Y VL SR + A G R+ + L G+ G
Sbjct: 473 AFQKEAYTRVLIGNIDLSRLIFPAATSG-------RMVEAFARRALWDAGLNYGHGTG-- 523
Query: 356 QAHLGAVFMPHGLGHFLGIDVHDVG------GYPEGVERIDEPG-------------LRS 396
HG+G+FL + VG +G+ EPG +
Sbjct: 524 ----------HGIGNFLCVHEWPVGFQSNNIAMAKGMFTSIEPGYYKDGEFGIRLEDVAL 573
Query: 397 LRTARHLQPGMVLTVEPGIYFIDH---LLDEALADPARASFLNR 437
+ A+ PG LT E + F+ + L+D +L P +LNR
Sbjct: 574 VVEAKTKYPGSYLTFEV-VSFVPYDRNLIDVSLLSPEHLQYLNR 616
>gi|45593147 EGF-like-domain, multiple 9 [Homo sapiens]
Length = 383
Score = 37.7 bits (86), Expect = 0.024
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 235 GMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYC 283
G H + CIC SG QNG C++D GGEY+C
Sbjct: 69 GTCHQPWQCICHSGWAGKFCDKDEHICTTQSPCQNGGQCMYDGGGEYHC 117
>gi|45545431 EGF-like-domain, multiple 9 [Homo sapiens]
Length = 383
Score = 37.7 bits (86), Expect = 0.024
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 235 GMRHSSYTCICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYC 283
G H + CIC SG QNG C++D GGEY+C
Sbjct: 69 GTCHQPWQCICHSGWAGKFCDKDEHICTTQSPCQNGGQCMYDGGGEYHC 117
>gi|40385867 methionine aminopeptidase 1D [Homo sapiens]
Length = 335
Score = 36.6 bits (83), Expect = 0.054
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 57/268 (21%)
Query: 211 KAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICGSGE---------NSAVLHYGHAGA 261
K++KV M E+++L S H++Y G G N+ + H G
Sbjct: 113 KSLKVDMTTEEIDALVHREIIS-----HNAYPSPLGYGGFPKSVCTSVNNVLCH----GI 163
Query: 262 PNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMK 321
P+ R +Q+GD+ D+ Y + D + +F G K + E R + A +
Sbjct: 164 PDSRPLQDGDIINIDVTVYYNGYHGDTSETFLV-GNVDECGKKLVEVARRCRDEAIAACR 222
Query: 322 PGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGG 381
G A ++ ++ + + G PH +GH +G H G
Sbjct: 223 AG------------------APFSVIGNTISHITHQN-GFQVCPHFVGHGIGSYFH---G 260
Query: 382 YPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQ 441
+PE ++ L ++ GM T+EP I + L D L+ +
Sbjct: 261 HPEIWHHANDSDL-------PMEEGMAFTIEP-IITEGSPEFKVLEDAWTVVSLDNQRSA 312
Query: 442 RFRGFGGVRIEEDVVVTDSGIELLTCVP 469
+F E V++T G ++LT +P
Sbjct: 313 QF--------EHTVLITSRGAQILTKLP 332
>gi|45545429 estrogen-related receptor gamma isoform 2 [Homo
sapiens]
Length = 435
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 415 IYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEE 474
+Y D+++DE + A LN +LQ + + +++E++ VT I L +E+
Sbjct: 302 VYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIED 361
Query: 475 IEA 477
+EA
Sbjct: 362 VEA 364
>gi|45545427 estrogen-related receptor gamma isoform 2 [Homo
sapiens]
Length = 435
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 415 IYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEE 474
+Y D+++DE + A LN +LQ + + +++E++ VT I L +E+
Sbjct: 302 VYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIED 361
Query: 475 IEA 477
+EA
Sbjct: 362 VEA 364
>gi|45545433 estrogen-related receptor gamma isoform 1 [Homo
sapiens]
Length = 458
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 415 IYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEE 474
+Y D+++DE + A LN +LQ + + +++E++ VT I L +E+
Sbjct: 325 VYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIED 384
Query: 475 IEA 477
+EA
Sbjct: 385 VEA 387
>gi|197209821 estrogen-related receptor gamma isoform 2 [Homo
sapiens]
Length = 435
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 415 IYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEE 474
+Y D+++DE + A LN +LQ + + +++E++ VT I L +E+
Sbjct: 302 VYADDYIMDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIED 361
Query: 475 IEA 477
+EA
Sbjct: 362 VEA 364
>gi|21361370 brain glycogen phosphorylase [Homo sapiens]
Length = 843
Score = 31.6 bits (70), Expect = 1.7
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 12/137 (8%)
Query: 100 LPASHATWMGKIHSK---EHFKEKYAVDDVQYVDEIASVLTSQKPSVLLTLRGVNTDSGS 156
LP + W + K H + YA++ +++D +A++ P + LR ++
Sbjct: 381 LPEALERWPVSMFEKLLPRHLEIIYAINQ-RHLDHVAALF----PGDVDRLRRMSVIEEG 435
Query: 157 VCRE---ASFDGISKFEVNNTI-LHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKA 212
C+ A I VN +H EIV+ VFK ELE ++ NK + R +
Sbjct: 436 DCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLL 495
Query: 213 VKVGMKEYELESLFEHY 229
G+ + +E + E +
Sbjct: 496 CNPGLADTIVEKIGEEF 512
>gi|71037379 liver glycogen phosphorylase [Homo sapiens]
Length = 847
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 176 LHPEIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHY 229
+H +IV+ +VFK ELE ++ NK + R + G+ E E + E Y
Sbjct: 459 IHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELIAEKIGEDY 512
>gi|238550159 estrogen-related receptor beta [Homo sapiens]
Length = 508
Score = 30.0 bits (66), Expect = 5.0
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 415 IYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEE 474
+Y D+++DE + A L R +LQ R + +++E++ VT + L +E+
Sbjct: 300 VYAEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIED 359
Query: 475 IEA 477
+EA
Sbjct: 360 LEA 362
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 30.0 bits (66), Expect = 5.0
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 189 DMELEVLRYTNKISSEAHREVMKAVKVGMKE-YELESLFEHYCYSR----GGMRHSSYTC 243
D E E LR+ + +A +VG E +EL+S +C R GG S+ C
Sbjct: 3405 DPEAEALRFQLATALQAEEN-----EVGCPEGFELDSQGA-FCVDRDECSGGPSPCSHAC 3458
Query: 244 ICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFD 276
+ G S G A A +DR ++ D C +D
Sbjct: 3459 LNAPGRFSCTCPTGFALAWDDRNCRDVDECAWD 3491
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 30.0 bits (66), Expect = 5.0
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 189 DMELEVLRYTNKISSEAHREVMKAVKVGMKE-YELESLFEHYCYSR----GGMRHSSYTC 243
D E E LR+ + +A +VG E +EL+S +C R GG S+ C
Sbjct: 4596 DPEAEALRFQLATALQAEEN-----EVGCPEGFELDSQGA-FCVDRDECSGGPSPCSHAC 4649
Query: 244 ICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFD 276
+ G S G A A +DR ++ D C +D
Sbjct: 4650 LNAPGRFSCTCPTGFALAWDDRNCRDVDECAWD 4682
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 30.0 bits (66), Expect = 5.0
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 11/93 (11%)
Query: 189 DMELEVLRYTNKISSEAHREVMKAVKVGMKE-YELESLFEHYCYSR----GGMRHSSYTC 243
D E E LR+ + +A +VG E +EL+S +C R GG S+ C
Sbjct: 3314 DPEAEALRFQLATALQAEEN-----EVGCPEGFELDSQGA-FCVDRDECSGGPSPCSHAC 3367
Query: 244 ICGSGENSAVLHYGHAGAPNDRTIQNGDMCLFD 276
+ G S G A A +DR ++ D C +D
Sbjct: 3368 LNAPGRFSCTCPTGFALAWDDRNCRDVDECAWD 3400
>gi|134304851 glutamate receptor, ionotropic, AMPA 2 isoform 3 [Homo
sapiens]
Length = 836
Score = 29.3 bits (64), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 47 VLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDT 90
+L+G E + YC D + F + + G YG D DT
Sbjct: 388 MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADT 431
>gi|134304848 glutamate receptor, ionotropic, AMPA 2 isoform 2
precursor [Homo sapiens]
Length = 883
Score = 29.3 bits (64), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 47 VLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDT 90
+L+G E + YC D + F + + G YG D DT
Sbjct: 435 MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADT 478
>gi|74275354 glutamate receptor, ionotropic, AMPA 2 isoform 1
precursor [Homo sapiens]
Length = 883
Score = 29.3 bits (64), Expect = 8.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 47 VLQGGEETQRYCTDTGVLFRQESFFHWAFGVTEPGCYGVIDVDT 90
+L+G E + YC D + F + + G YG D DT
Sbjct: 435 MLEGNERYEGYCVDLAAEIAKHCGFKYKLTIVGDGKYGARDADT 478
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,262,461
Number of Sequences: 37866
Number of extensions: 861685
Number of successful extensions: 1616
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 24
length of query: 493
length of database: 18,247,518
effective HSP length: 106
effective length of query: 387
effective length of database: 14,233,722
effective search space: 5508450414
effective search space used: 5508450414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.