Search of human proteins with 148839335

Search of human proteins with 148839335

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148839335 dpy-19-like 1 [Homo sapiens]
         (675 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148839335 dpy-19-like 1 [Homo sapiens]                            1373   0.0  
gi|93277105 dpy-19-like 2 [Homo sapiens]                              938   0.0  
gi|46409292 dpy-19-like 3 [Homo sapiens]                              273   3e-73
gi|167466219 dpy-19-like 4 [Homo sapiens]                             213   5e-55
gi|110347463 human immunodeficiency virus type I enhancer bindin...    34   0.50 
gi|116235446 LAG1 longevity assurance homolog 3 [Homo sapiens]         32   1.9  
gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens neandert...    32   2.5  
gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]               32   2.5  
gi|4758874 transmembrane 9 superfamily member 2 [Homo sapiens]         32   2.5  
gi|32307161 cullin 1 [Homo sapiens]                                    31   3.3  
gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens]             31   3.3  
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ...    30   5.6  
gi|157649073 adenylyl cyclase-associated protein [Homo sapiens]        30   5.6  
gi|5453595 adenylyl cyclase-associated protein [Homo sapiens]          30   5.6  
gi|50233862 olfactory receptor, family 5, subfamily D, member 13...    30   5.6  
gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]            30   7.3  
gi|239746658 PREDICTED: hypothetical protein [Homo sapiens]            30   7.3  
gi|4502837 cholinergic receptor, nicotinic, beta 4 [Homo sapiens]      30   7.3  

>gi|148839335 dpy-19-like 1 [Homo sapiens]
          Length = 675

 Score = 1373 bits (3554), Expect = 0.0
 Identities = 675/675 (100%), Positives = 675/675 (100%)

Query: 1   MEGRPPPEGRPPPRPRTGRAPRGRRRAVFAAVLHWSHITHLFENDRHFSHLSTLEREMAF 60
           MEGRPPPEGRPPPRPRTGRAPRGRRRAVFAAVLHWSHITHLFENDRHFSHLSTLEREMAF
Sbjct: 1   MEGRPPPEGRPPPRPRTGRAPRGRRRAVFAAVLHWSHITHLFENDRHFSHLSTLEREMAF 60

Query: 61  RTEMGLYYSYFKTIVEAPSFLNGVWMIMNDKLTEYPLVINTLKRFNLYPEVILASWYRIY 120
           RTEMGLYYSYFKTIVEAPSFLNGVWMIMNDKLTEYPLVINTLKRFNLYPEVILASWYRIY
Sbjct: 61  RTEMGLYYSYFKTIVEAPSFLNGVWMIMNDKLTEYPLVINTLKRFNLYPEVILASWYRIY 120

Query: 121 TKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYVAVIFILNGLMMALFFIYGTY 180
           TKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYVAVIFILNGLMMALFFIYGTY
Sbjct: 121 TKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYVAVIFILNGLMMALFFIYGTY 180

Query: 181 LSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILRATKLYRGS 240
           LSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILRATKLYRGS
Sbjct: 181 LSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILRATKLYRGS 240

Query: 241 LIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVL 300
           LIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVL
Sbjct: 241 LIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVL 300

Query: 301 MFGNSMLLTSYYASSLVIIWGILAMKPHFLKINVSELSLWVIQGCFWLFGTVILKYLTSK 360
           MFGNSMLLTSYYASSLVIIWGILAMKPHFLKINVSELSLWVIQGCFWLFGTVILKYLTSK
Sbjct: 301 MFGNSMLLTSYYASSLVIIWGILAMKPHFLKINVSELSLWVIQGCFWLFGTVILKYLTSK 360

Query: 361 IFGIADDAHIGNLLTSKFFSYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLPVVLVVFV 420
           IFGIADDAHIGNLLTSKFFSYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLPVVLVVFV
Sbjct: 361 IFGIADDAHIGNLLTSKFFSYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLPVVLVVFV 420

Query: 421 AIVRKIISDMWGVLAKQQTHVRKHQFDHGELVYHALQLLAYTALGILIMRLKLFLTPHMC 480
           AIVRKIISDMWGVLAKQQTHVRKHQFDHGELVYHALQLLAYTALGILIMRLKLFLTPHMC
Sbjct: 421 AIVRKIISDMWGVLAKQQTHVRKHQFDHGELVYHALQLLAYTALGILIMRLKLFLTPHMC 480

Query: 481 VMASLICSRQLFGWLFCKVHPGAIVFAILAAMSIQGSANLQTQWNIVGEFSNLPQEELIE 540
           VMASLICSRQLFGWLFCKVHPGAIVFAILAAMSIQGSANLQTQWNIVGEFSNLPQEELIE
Sbjct: 481 VMASLICSRQLFGWLFCKVHPGAIVFAILAAMSIQGSANLQTQWNIVGEFSNLPQEELIE 540

Query: 541 WIKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEV 600
           WIKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEV
Sbjct: 541 WIKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEV 600

Query: 601 KRELIKLKVNYYILEESWCVRRSKPGCSMPEIWDVEDPANAGKTPLCNLLVKDSKPHFTT 660
           KRELIKLKVNYYILEESWCVRRSKPGCSMPEIWDVEDPANAGKTPLCNLLVKDSKPHFTT
Sbjct: 601 KRELIKLKVNYYILEESWCVRRSKPGCSMPEIWDVEDPANAGKTPLCNLLVKDSKPHFTT 660

Query: 661 VFQNSVYKVLEVVKE 675
           VFQNSVYKVLEVVKE
Sbjct: 661 VFQNSVYKVLEVVKE 675


>gi|93277105 dpy-19-like 2 [Homo sapiens]
          Length = 758

 Score =  938 bits (2425), Expect = 0.0
 Identities = 445/646 (68%), Positives = 538/646 (83%), Gaps = 1/646 (0%)

Query: 27  AVFAAVLHWSHITHLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLNGVWM 86
           AVF A+LHW H+  LFENDRHFSHLS+LEREM FRTEMGLYYSYFKTI+EAPSFL G+WM
Sbjct: 113 AVFVAILHWLHLVTLFENDRHFSHLSSLEREMTFRTEMGLYYSYFKTIIEAPSFLEGLWM 172

Query: 87  IMNDKLTEYPLVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPI 146
           IMND+LTEYPL+IN +KRF+LYPEVI+ASWY  +  IM+L G++TK CW VTR E L+ +
Sbjct: 173 IMNDRLTEYPLIINAIKRFHLYPEVIIASWYCTFMGIMNLFGLETKTCWNVTRIEPLNEV 232

Query: 147 ESCEGLGDPACFYVAVIFILNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVM 206
           +SCEGLGDPACFYV VIFILNGLMM LFF+YG YLSG++LGGL+TVLCFFFNHGE TRVM
Sbjct: 233 QSCEGLGDPACFYVGVIFILNGLMMGLFFMYGAYLSGTQLGGLITVLCFFFNHGEATRVM 292

Query: 207 WTPPLRESFSYPFLVLQMLLVTHILRATKLYRGSLIALCISNVFFMLPWQFAQFVLLTQI 266
           WTPPLRESFSYPFLVLQM ++T ILR +   R   IALC+SNV FMLPWQFAQF+L TQI
Sbjct: 293 WTPPLRESFSYPFLVLQMCILTLILRTSSNDRRPFIALCLSNVAFMLPWQFAQFILFTQI 352

Query: 267 ASLFAVYVVGYIDICKLRKIIYIHMISLALCFVLMFGNSMLLTSYYASSLVIIWGILAMK 326
           ASLF +YVVGYI+  K +KIIY++MIS+ L F+LMFGNSM L+SYY+SSL++ W I+  +
Sbjct: 353 ASLFPMYVVGYIEPSKFQKIIYMNMISVTLSFILMFGNSMYLSSYYSSSLLMTWAIILKR 412

Query: 327 PHFLKINVSELSLWVIQGCFWLFGTVILKYLTSKIFGIADDAHIGNLLTSKFFSYKDFDT 386
               K+ VS+L+ W+IQG  W  GT+ILK+LTSKI G++D   + +L+ ++   Y DFDT
Sbjct: 413 NEIQKLGVSKLNFWLIQGSAWWCGTIILKFLTSKILGVSDHIRLSDLIAARILRYTDFDT 472

Query: 387 LLYTCAAEFDFMEKETPLRYTKTLLLPVVLVVFVAIVRKIISDMWGVLAKQQTHVRKHQF 446
           L+YTCA EFDFMEK TPLRYTKTLLLPVV+V+   I +K + D+  VLA    ++RK   
Sbjct: 473 LIYTCAPEFDFMEKATPLRYTKTLLLPVVMVITCFIFKKTVRDISYVLA-TNIYLRKQLL 531

Query: 447 DHGELVYHALQLLAYTALGILIMRLKLFLTPHMCVMASLICSRQLFGWLFCKVHPGAIVF 506
           +H EL +H LQLL +TAL ILIMRLK+FLTPHMCVMASLICSRQLFGWLF +V    ++F
Sbjct: 532 EHSELAFHTLQLLVFTALAILIMRLKMFLTPHMCVMASLICSRQLFGWLFRRVRFEKVIF 591

Query: 507 AILAAMSIQGSANLQTQWNIVGEFSNLPQEELIEWIKYSTKPDAVFAGAMPTMASVKLSA 566
            IL  MSIQG ANL+ QW+I+GEF+NLPQEEL++WIKYST  DAVFAGAMPTMAS+KLS 
Sbjct: 592 GILTVMSIQGYANLRNQWSIIGEFNNLPQEELLQWIKYSTTSDAVFAGAMPTMASIKLST 651

Query: 567 LRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEVKRELIKLKVNYYILEESWCVRRSKPG 626
           L PIVNHPHYEDA LRARTKIVYS YSRK+A+EV+ +L++L VNYY+LEE+WCV R+KPG
Sbjct: 652 LHPIVNHPHYEDADLRARTKIVYSTYSRKSAKEVRDKLLELHVNYYVLEEAWCVVRTKPG 711

Query: 627 CSMPEIWDVEDPANAGKTPLCNLLVKDSKPHFTTVFQNSVYKVLEV 672
           CSM EIWDVEDP+NA   PLC++L++D++P+FTTVFQNSVY+VL+V
Sbjct: 712 CSMLEIWDVEDPSNAANPPLCSVLLEDARPYFTTVFQNSVYRVLKV 757


>gi|46409292 dpy-19-like 3 [Homo sapiens]
          Length = 716

 Score =  273 bits (699), Expect = 3e-73
 Identities = 208/685 (30%), Positives = 326/685 (47%), Gaps = 85/685 (12%)

Query: 37  HITHLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLNGVWMIMNDKLTEYP 96
           ++  L END  FS++  +ERE++FRTE GLYYSY+K +++AP+ + G   ++ D  TE  
Sbjct: 64  YLATLHENDLWFSNIKEVEREISFRTECGLYYSYYKQMLQAPTLVQGFHGLIYDNKTESM 123

Query: 97  LVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPA 156
             IN L+R N+Y EV L+  YR+       + IQ  +                    +P 
Sbjct: 124 KTINLLQRMNIYQEVFLSILYRV-------LPIQKYL--------------------EPV 156

Query: 157 CFYVAVIFILNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFS 216
            FY+  +F L  + +   +I    LSG+ L GL+    +  N  + TRV +T PLRE+++
Sbjct: 157 YFYIYTLFGLQAIYVTALYITSWLLSGTWLSGLLAAFWYVTNRIDTTRVEFTIPLRENWA 216

Query: 217 YPFLVLQMLLVTHILRATKL---YRGSLIALCISNVFFMLPWQFAQFVLLTQIASLFAVY 273
            PF  +Q+  +T+ LR        R +L+A+ IS   F L WQF QF++L Q   LF + 
Sbjct: 217 LPFFAIQIAAITYFLRPNLQPLSERLTLLAIFISTFLFSLTWQFNQFMMLMQALVLFTLD 276

Query: 274 VVGYIDICKLRKIIYIHMISLALCFVLMFGNSMLLTSYYASSLVIIWGILAMKPHFLKIN 333
            +  +   K   +  I + SL L  +L F NSM+L      SL+I + +       L+ N
Sbjct: 277 SLDMLPAVKATWLYGIQITSLLLVCILQFFNSMIL-----GSLLISFNLSVFIARKLQKN 331

Query: 334 V------SELSLWVIQGCFWLFGTVILKYLTSKIFGIADDAHIGNLLTSKFF--SYKDFD 385
           +      + L   ++     L  T+ L  +  KI  +  D HI   L +KF   + +DFD
Sbjct: 332 LKTGSFLNRLGKLLLHLFMVLCLTLFLNNIIKKILNLKSDEHIFKFLKAKFGLGATRDFD 391

Query: 386 TLLYTCAAEFDFMEKETPLRYTKTLL-------LPVVLVVFVAIVRKIISDMWGVLAKQQ 438
             LY C   F  +   T  R + TLL       L + ++V   +    +SD       QQ
Sbjct: 392 ANLYLCEEAFGLLPFNTFGRLSDTLLFYAYIFVLSITVIVAFVVAFHNLSDS----TNQQ 447

Query: 439 T--HVRKHQFD-HGELVYHALQLLAYTALGILIMRLKLFLTPHMCVMASL-ICSRQLFGW 494
           +   + K   D   E  Y+ +  + +  L +  M +K   T HMCV AS  +CS +++  
Sbjct: 448 SVGKMEKGTVDLKPETAYNLIHTILFGFLALSTMGMKYLWTSHMCVFASFGLCSPEIWEL 507

Query: 495 LFCKVH----------PGAIVFAILAAMSIQGSANLQTQWNIVGEFSNLPQEELIEWIKY 544
           L   VH            ++   IL  +  +    +  + + + EF +    EL+ WI  
Sbjct: 508 LLKSVHLYNPKRICIMRYSVPILILLYLCYKFWPGMMDELSELREFYDPDTVELMNWINS 567

Query: 545 STKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEVKREL 604
           +T   AVFAG+M  +A VKL   R + NHPHYED+ LR RT+ VY +Y+++A EEV   L
Sbjct: 568 NTPRKAVFAGSMQLLAGVKLCTGRTLTNHPHYEDSSLRERTRAVYQIYAKRAPEEVHALL 627

Query: 605 IKLKVNYYILEESWCV-RRSKPGCSMPEIWDV-------------EDPANAGKTPLCNLL 650
                +Y ILE+S C  RR + GC + ++ D+              D   A     C  +
Sbjct: 628 RSFGTDYVILEDSICYERRHRRGCRLRDLLDIANGHMMDGPGENDPDLKPADHPRFCEEI 687

Query: 651 VKDSKP---HFTTVFQNSVYKVLEV 672
            ++  P   +FT VFQN  + V ++
Sbjct: 688 KRNLPPYVAYFTRVFQNKTFHVYKL 712


>gi|167466219 dpy-19-like 4 [Homo sapiens]
          Length = 723

 Score =  213 bits (542), Expect = 5e-55
 Identities = 166/641 (25%), Positives = 310/641 (48%), Gaps = 66/641 (10%)

Query: 27  AVFAAVLHWSHITHLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLNGVWM 86
           AV + +++  +++   E    FS+   LERE+ F+ +  +YYSY+K +++APSF  GV+ 
Sbjct: 59  AVTSGMMYALYLSAYHERKFWFSNRQELEREITFQGDSAIYYSYYKDMLKAPSFERGVYE 118

Query: 87  IMNDKLTEYPLVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPI 146
           + ++  T     IN +++ +LYPE+I +  Y+  T   ++I                   
Sbjct: 119 LTHNNKTVSLKTINAVQQMSLYPELIASILYQA-TGSNEII------------------- 158

Query: 147 ESCEGLGDPACFYVAVIFILNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVM 206
                  +P  FY+ ++F L G+ +   F+    +SG+ L G++TV  F  N  + TR+ 
Sbjct: 159 -------EPVYFYIGIVFGLQGIYVTALFVTSWLMSGTWLAGMLTVAWFVINRVDTTRIE 211

Query: 207 WTPPLRESFSYPFLVLQMLLVTHILRA---TKLYRGSLIALCISNVFFMLPWQFAQFVLL 263
           ++ PLRE+++ P+   Q+  +T  L++   T   R   + +  S   FM+ W+++ ++L 
Sbjct: 212 YSIPLRENWALPYFACQIAALTGYLKSNLNTYGERFCYLLMSASTYTFMMMWEYSHYLLF 271

Query: 264 TQIASLFAVYVVGYIDICKLRKIIYIHMISLALCFVLMFGNSMLLTSYYASSLVIIWGIL 323
            Q  SLF +         K+ ++  I++ SL L ++L F N  LL S   S +  +    
Sbjct: 272 LQAISLFLLDTFSVEQSDKVYEVYKIYIFSLFLGYLLQFENPALLVSPLLSLVAAL---- 327

Query: 324 AMKPHFLKINVSELS-----LWVIQGCFWLFGTVILKYLTSKIFGIADDAHIGNLLTSKF 378
            M    L++NV + S     + VI        T+ L  +        ++ H+   L  KF
Sbjct: 328 -MLAKCLQLNVKKGSFVAKIIKVINFYLVCTLTITLNIIMKMFVPHKENGHMLKFLEVKF 386

Query: 379 --FSYKDFDTLLYTCAAEFDFMEKETPLRYTKTLLLP----VVLVVFVAIVRKIISDMWG 432
                K+F      C        ++  LR T++ LLP    V+++ F+++++ I   + G
Sbjct: 387 GLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSSLLPFYILVLIICFLSMLQVIFRRING 446

Query: 433 VLAKQQTHVRKHQF-DHGELVYHALQLLAYTALGILIMRLKLFLTPHMCVMASL-ICSRQ 490
              K+   +   +  +  E++YH +  +   +L ++I  LK    P++C++A+  +CS +
Sbjct: 447 KSLKETVTLEDGRIGERPEIIYHVIHTILLGSLAMVIEGLKYIWIPYVCMLAAFGVCSPE 506

Query: 491 ----LFGWLFCK-VHPGAIVFAILAAMSI----------QGSANLQTQWNIVGEFSNLPQ 535
               LF WL  + VHP  I+ A++ +M++          +    L T+   + EF +   
Sbjct: 507 LWMTLFKWLRLRTVHP--ILLALILSMAVPTIIGLSLWKEFFPRLMTELMELQEFYDPDT 564

Query: 536 EELIEWIKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRK 595
            EL+ WIK      AVFAG+   M ++KL     + + P Y D  L  R + +Y +YS++
Sbjct: 565 VELMTWIKRQAPVAAVFAGSPQLMGAIKLCTGWMVTSLPLYNDDDLLKRNENIYQIYSKR 624

Query: 596 AAEEVKRELIKLKVNYYILEESWCVR-RSKPGCSMPEIWDV 635
           +AE++ + L   K NY I+E++ C       GC + ++ D+
Sbjct: 625 SAEDIYKILTSYKANYLIVEDAICNEVGPMRGCRVKDLLDI 665


>gi|110347463 human immunodeficiency virus type I enhancer binding
           protein 2 [Homo sapiens]
          Length = 2446

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 28/130 (21%)

Query: 532 NLPQEELIEWIKYSTKPDA-------VFAGAMPTMASVKLSALRPIVNHPHYEDAGLRAR 584
           + PQ  L + + +STKP         +F G +P++AS     L P   H H   +G   R
Sbjct: 99  SFPQHSLPQGVMHSTKPHQSLEGPPWLFPGPLPSVAS---EDLFPFPIHGH---SGGYPR 152

Query: 585 TKI-----VYSMYSRKAAEEV----KRELIKLKVNYYILEESWCVRRSKPGCSMPEIWDV 635
            KI      YS YS+K+ E+     K+E    K   YI    +C R     C+ P +   
Sbjct: 153 KKISSLNPAYSQYSQKSIEQAEEAHKKEHKPKKPGKYIC--PYCSR----ACAKPSVLKK 206

Query: 636 EDPANAGKTP 645
              ++ G+ P
Sbjct: 207 HIRSHTGERP 216


>gi|116235446 LAG1 longevity assurance homolog 3 [Homo sapiens]
          Length = 383

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 173 LFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILR 232
           LFFI+ T    SRL      + F F    CT ++    L   FSY FL LQ++    IL+
Sbjct: 263 LFFIFSTIFFISRL------IVFPFWILYCTLILPMYHLEPFFSYIFLNLQLM----ILQ 312

Query: 233 ATKLYRGSLIALCISNVFFM 252
              LY G  I   ++   FM
Sbjct: 313 VLHLYWGYYILKMLNRCIFM 332


>gi|196123588 NADH dehydrogenase subunit 4 [Homo sapiens
           neanderthalensis]
          Length = 459

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 49  SHLSTLEREMAFRTEMGLYYSYF---KTIVEAPSFLNGVWMIMNDKLTEY-----PLVIN 100
           ++L  L   MAF  +M LY  +    K  VEAP   + V   +  KL  Y      L++N
Sbjct: 192 NNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILN 251

Query: 101 TLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYV 160
            L +   YP ++L+ W  I T  + L     K     +    ++ + +   +  P  F  
Sbjct: 252 PLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTG 311

Query: 161 AVI-FILNGLMMALFF 175
           AVI  I +GL  +L F
Sbjct: 312 AVILMIAHGLTSSLLF 327



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 189 LVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQ---MLLVTHI-LRATKL-----YRG 239
           L  VL     +G     +   PL +  +YPFLVL    M++ + I LR T L     Y  
Sbjct: 231 LAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSS 290

Query: 240 -SLIALCISNVFFMLPWQFAQFVLL 263
            S +AL ++ +    PW F   V+L
Sbjct: 291 ISHMALVVTAILIQTPWSFTGAVIL 315


>gi|251831116 NADH dehydrogenase subunit 4 [Homo sapiens]
          Length = 459

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 49  SHLSTLEREMAFRTEMGLYYSYF---KTIVEAPSFLNGVWMIMNDKLTEY-----PLVIN 100
           ++L  L   MAF  +M LY  +    K  VEAP   + V   +  KL  Y      L++N
Sbjct: 192 NNLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLTLILN 251

Query: 101 TLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYV 160
            L +   YP ++L+ W  I T  + L     K     +    ++ + +   +  P  F  
Sbjct: 252 PLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTG 311

Query: 161 AVI-FILNGLMMALFF 175
           AVI  I +GL  +L F
Sbjct: 312 AVILMIAHGLTSSLLF 327



 Score = 31.6 bits (70), Expect = 2.5
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 189 LVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQ---MLLVTHI-LRATKL-----YRG 239
           L  VL     +G     +   PL +  +YPFLVL    M++ + I LR T L     Y  
Sbjct: 231 LAAVLLKLGGYGMMRLTLILNPLTKHMAYPFLVLSLWGMIMTSSICLRQTDLKSLIAYSS 290

Query: 240 -SLIALCISNVFFMLPWQFAQFVLL 263
            S +AL ++ +    PW F   V+L
Sbjct: 291 ISHMALVVTAILIQTPWSFTGAVIL 315


>gi|4758874 transmembrane 9 superfamily member 2 [Homo sapiens]
          Length = 663

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 15/132 (11%)

Query: 177 YGTYLSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILRATKL 236
           Y   L G  +GG++   C F         +W+  +   F + FLV  +L++T    AT L
Sbjct: 517 YTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVIT-CSEATIL 575

Query: 237 YRGSLIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYIDICKLRKIIYIHMISLAL 296
                  LC  +      WQ+  F+     A  F +Y V Y    KL+       I+   
Sbjct: 576 L--CYFHLCAEDYH----WQWRSFLTSGFTAVYFLIYAVHYF-FSKLQ-------ITGTA 621

Query: 297 CFVLMFGNSMLL 308
             +L FG +M++
Sbjct: 622 STILYFGYTMIM 633


>gi|32307161 cullin 1 [Homo sapiens]
          Length = 776

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 113 LASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESC--EGLGDPACFYVAVIFI---LN 167
           L   Y + ++I D +G   K+  T    +GL+ IE C    L DP  +   V+ +    N
Sbjct: 319 LGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALNDPKMYVQTVLDVHKKYN 378

Query: 168 GLMMALF 174
            L+M+ F
Sbjct: 379 ALVMSAF 385


>gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens]
          Length = 998

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 542 IKYSTKPDAVFAGAMPTMASVKLSALRPIVNHPHYEDAGLRARTKIVYSMYSRKAAEEVK 601
           +KY  K + + +     M SV+L  LRP   +       +RART   Y  YSR A  E  
Sbjct: 488 MKYFEKSEGIASTVTSQMNSVQLDGLRPDARYV----VQVRARTVAGYGQYSRPAEFETT 543

Query: 602 RE 603
            E
Sbjct: 544 SE 545


>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
           subunit [Homo sapiens]
          Length = 551

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 3   GRPP--PEGRPPPRPRTGRAPRGRRRAVFAAVLHWSHITHLFENDRHFSHLSTLEREMAF 60
           G PP  P GRPPP  R    P GR        L  +    +   +R  S  S + R ++ 
Sbjct: 377 GPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISS-SAISRAVS- 434

Query: 61  RTEMGLYYSYFKTIVEAPSFL 81
               G Y S  +T+V A S +
Sbjct: 435 DASAGDYGSAIETLVTAISLI 455


>gi|157649073 adenylyl cyclase-associated protein [Homo sapiens]
          Length = 475

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 3   GRPPPEGRPPPRP---RTGRAPRGRRRAVFAAVLHWSHITHLFENDRHFSHLSTLEREMA 59
           G PPP   PPP P    +G      R A+FA +     ITH     +H S      +  A
Sbjct: 229 GPPPPPPGPPPPPVSTSSGSDESASRSALFAQINQGESITHAL---KHVSDDMKTHKNPA 285

Query: 60  FRTEMG 65
            + + G
Sbjct: 286 LKAQSG 291


>gi|5453595 adenylyl cyclase-associated protein [Homo sapiens]
          Length = 475

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 3   GRPPPEGRPPPRP---RTGRAPRGRRRAVFAAVLHWSHITHLFENDRHFSHLSTLEREMA 59
           G PPP   PPP P    +G      R A+FA +     ITH     +H S      +  A
Sbjct: 229 GPPPPPPGPPPPPVSTSSGSDESASRSALFAQINQGESITHAL---KHVSDDMKTHKNPA 285

Query: 60  FRTEMG 65
            + + G
Sbjct: 286 LKAQSG 291


>gi|50233862 olfactory receptor, family 5, subfamily D, member 13
           [Homo sapiens]
          Length = 314

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 34/146 (23%)

Query: 169 LMMALFFIYGTYLSGSRLGGLV---------TVLCFFFNHGECTRVMWTPPLRESFSYPF 219
           L +   F+Y   + G+ LG ++         T++CFF +H   T           F +  
Sbjct: 29  LFLVFLFVYTVTVVGN-LGMIIIIRLNSKLHTIMCFFLSHLSLT----------DFCFST 77

Query: 220 LVLQMLLVTHILR-ATKLYRGSLIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYI 278
           +V   LL   ++   T  + G ++  C + +F            +T+   L A+    ++
Sbjct: 78  VVTPKLLENLVVEYRTISFSGCIMQFCFACIFG-----------VTETFMLAAMAYDRFV 126

Query: 279 DICKLRKIIYIHMISLALCFVLMFGN 304
            +CK   ++Y  ++S  LC +L+ G+
Sbjct: 127 AVCK--PLLYTTIMSQKLCALLVAGS 150


>gi|239752133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 3   GRPPPEGRPPPRPRTGRAPRGRR 25
           G+P P+ RPP   R  R PR RR
Sbjct: 173 GKPEPQRRPPRGSRAARRPRARR 195


>gi|239746658 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 411

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 12/23 (52%), Positives = 14/23 (60%)

Query: 3   GRPPPEGRPPPRPRTGRAPRGRR 25
           G+P P+ RPP   R  R PR RR
Sbjct: 360 GKPEPQRRPPRGSRAARRPRARR 382


>gi|4502837 cholinergic receptor, nicotinic, beta 4 [Homo sapiens]
          Length = 498

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 395 FDFMEKETPLRYTKTLLLPVVLVVFVAIV 423
           +DF+ K  PL YT  L++P VL   +AI+
Sbjct: 224 YDFIIKRKPLFYTINLIIPCVLTTLLAIL 252


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,324,500
Number of Sequences: 37866
Number of extensions: 1116305
Number of successful extensions: 5533
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 5493
Number of HSP's gapped (non-prelim): 37
length of query: 675
length of database: 18,247,518
effective HSP length: 109
effective length of query: 566
effective length of database: 14,120,124
effective search space: 7991990184
effective search space used: 7991990184
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.