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Search of human proteins with 148762948
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148762948 pseudouridylate synthase 7 homolog (S.
cerevisiae)-like [Homo sapiens]
(701 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148762985 pseudouridylate synthase 7 homolog (S. cerevisiae)-... 1417 0.0
gi|148762948 pseudouridylate synthase 7 homolog (S. cerevisiae)-... 1417 0.0
gi|148762961 pseudouridylate synthase 7 homolog (S. cerevisiae)-... 1417 0.0
gi|50727002 pseudouridylate synthase 7 homolog [Homo sapiens] 220 3e-57
gi|38524622 formin binding protein 1 [Homo sapiens] 34 0.40
gi|153792012 DNA polymerase zeta [Homo sapiens] 34 0.40
gi|58530840 desmoplakin isoform I [Homo sapiens] 34 0.53
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 34 0.53
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 34 0.53
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 34 0.53
gi|223718222 fibronectin type III and SPRY domain containing 1-l... 33 1.2
gi|221316754 exophilin 5 isoform c [Homo sapiens] 32 2.0
gi|221316751 exophilin 5 isoform b [Homo sapiens] 32 2.0
gi|119395738 insulin receptor isoform Short precursor [Homo sapi... 32 2.0
gi|119395736 insulin receptor isoform Long precursor [Homo sapiens] 32 2.0
gi|221316747 exophilin 5 isoform a [Homo sapiens] 32 2.0
gi|103471995 serum response factor binding protein 1 [Homo sapiens] 32 2.0
gi|145309326 laminin, gamma 1 precursor [Homo sapiens] 32 2.6
gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog... 31 4.5
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 30 5.8
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 30 5.8
gi|38570109 CAP-binding protein complex interacting protein 1 is... 30 5.8
gi|38570107 CAP-binding protein complex interacting protein 1 is... 30 5.8
gi|10190702 MRS2-like, magnesium homeostasis factor [Homo sapiens] 30 5.8
gi|30795238 ATP-binding cassette, sub-family A, member 12 isofor... 30 7.6
gi|87299628 biorientation of chromosomes in cell division 1-like... 30 7.6
gi|28372531 protein phosphatase 4, regulatory subunit 2 [Homo sa... 30 9.9
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 30 9.9
gi|4505001 LIM domain kinase 1 [Homo sapiens] 30 9.9
gi|4758206 dual specificity phosphatase 2 [Homo sapiens] 30 9.9
>gi|148762985 pseudouridylate synthase 7 homolog (S.
cerevisiae)-like [Homo sapiens]
Length = 701
Score = 1417 bits (3669), Expect = 0.0
Identities = 701/701 (100%), Positives = 701/701 (100%)
Query: 1 MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI 60
MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI
Sbjct: 1 MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI 60
Query: 61 QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE 120
QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE
Sbjct: 61 QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE 120
Query: 121 KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR 180
KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR
Sbjct: 121 KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR 180
Query: 181 QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD 240
QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD
Sbjct: 181 QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD 240
Query: 241 HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV 300
HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV
Sbjct: 241 HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV 300
Query: 301 IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN 360
IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN
Sbjct: 301 IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN 360
Query: 361 IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV 420
IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV
Sbjct: 361 IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV 420
Query: 421 KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ 480
KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ
Sbjct: 421 KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ 480
Query: 481 TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN 540
TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN
Sbjct: 481 TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN 540
Query: 541 EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG 600
EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG
Sbjct: 541 EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG 600
Query: 601 YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD 660
YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD
Sbjct: 601 YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD 660
Query: 661 IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV 701
IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV
Sbjct: 661 IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV 701
>gi|148762948 pseudouridylate synthase 7 homolog (S.
cerevisiae)-like [Homo sapiens]
Length = 701
Score = 1417 bits (3669), Expect = 0.0
Identities = 701/701 (100%), Positives = 701/701 (100%)
Query: 1 MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI 60
MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI
Sbjct: 1 MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI 60
Query: 61 QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE 120
QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE
Sbjct: 61 QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE 120
Query: 121 KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR 180
KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR
Sbjct: 121 KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR 180
Query: 181 QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD 240
QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD
Sbjct: 181 QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD 240
Query: 241 HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV 300
HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV
Sbjct: 241 HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV 300
Query: 301 IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN 360
IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN
Sbjct: 301 IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN 360
Query: 361 IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV 420
IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV
Sbjct: 361 IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV 420
Query: 421 KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ 480
KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ
Sbjct: 421 KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ 480
Query: 481 TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN 540
TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN
Sbjct: 481 TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN 540
Query: 541 EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG 600
EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG
Sbjct: 541 EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG 600
Query: 601 YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD 660
YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD
Sbjct: 601 YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD 660
Query: 661 IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV 701
IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV
Sbjct: 661 IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV 701
>gi|148762961 pseudouridylate synthase 7 homolog (S.
cerevisiae)-like [Homo sapiens]
Length = 701
Score = 1417 bits (3669), Expect = 0.0
Identities = 701/701 (100%), Positives = 701/701 (100%)
Query: 1 MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI 60
MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI
Sbjct: 1 MEEDTDYRIRFSSLCFFNDHVGFHGTIKSSPSDFIVIEIDEQGQLVNKTIDEPIFKISEI 60
Query: 61 QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE 120
QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE
Sbjct: 61 QLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEE 120
Query: 121 KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR 180
KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR
Sbjct: 121 KADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIR 180
Query: 181 QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD 240
QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD
Sbjct: 181 QKFPFLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKD 240
Query: 241 HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV 300
HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV
Sbjct: 241 HRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKV 300
Query: 301 IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN 360
IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN
Sbjct: 301 IYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKN 360
Query: 361 IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV 420
IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV
Sbjct: 361 IEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENV 420
Query: 421 KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ 480
KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ
Sbjct: 421 KKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQ 480
Query: 481 TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN 540
TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN
Sbjct: 481 TEDAKGTLSLMPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWN 540
Query: 541 EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG 600
EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG
Sbjct: 541 EAVSYRLETYGARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLG 600
Query: 601 YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD 660
YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD
Sbjct: 601 YNIQYPKNKVGQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHD 660
Query: 661 IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV 701
IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV
Sbjct: 661 IDVKTKGSHIDETALSLLISFDLDASCYATVCLKEIMKHDV 701
>gi|50727002 pseudouridylate synthase 7 homolog [Homo sapiens]
Length = 661
Score = 220 bits (561), Expect = 3e-57
Identities = 193/703 (27%), Positives = 327/703 (46%), Gaps = 109/703 (15%)
Query: 35 IVIEIDEQGQLVNKTIDEPIFKISEIQLEPNNFPKKPKLDLQN--LSLEDGRNQEVHTLI 92
+V+E ++ G V +T + K+SE L K + LQN LS+ + + T+
Sbjct: 16 LVVEDNDSGVPVEETKKQ---KLSECSLT------KGQDGLQNDFLSISEDVPRPPDTVS 66
Query: 93 KYTDGDQNHQSGSEKEDTIVDGTSK-CEEKADVLSSFLDEKTHELLNNFACDVREKWLSK 151
G + ++E+ DG S+ CEE+ SF D H L E +
Sbjct: 67 TGKGGKNSEAQLEDEEEEEEDGLSEECEEEES--ESFADMMKHGLT--------EADVGI 116
Query: 152 TELIGLPPEFSIGRILDKNQRASLHSAIRQKFPFLVTVGKNSEIVVKPNLEYKELCHLVS 211
T+ + FS G + ++ +H +GK+ I +L V
Sbjct: 117 TKFVSSHQGFS-GILKERYSDFVVHE-----------IGKDGRIS-----HLNDLSIPVD 159
Query: 212 EEE-AFDFFKYLDAK-------------KENSKFTFKPDTNKDHRKAVHHFVNKKFGNLV 257
EE+ + D F L A+ KE S + K+ R +H + F L
Sbjct: 160 EEDPSEDIFTVLTAEEKQRLEELQLFKNKETSVAIEVIEDTKEKRTIIHQAIKSLFPGL- 218
Query: 258 ETKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQE-----GKVIYTAFTLRKENL 312
ETK+ + G +V H GK+ L+ ++ + Y F L KEN
Sbjct: 219 ETKTEDR----EGKKYIVAY-------HAAGKKALANPRKHSWPKSRGSYCHFVLYKENK 267
Query: 313 EMFEAIGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNV 372
+ +AI L+ L V P+ FSY G KDK+AIT Q + V K+T +RL ++ K + ++
Sbjct: 268 DTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLAHLNKCLMNFKLGN 327
Query: 373 FNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQ 432
F+ + + L+LG+L+GNHF +V+RN+ +++ +A+ ++K+ GF+NYYG Q
Sbjct: 328 FSYQK--NPLKLGELQGNHFTVVLRNI-------TGTDDQVQQAMNSLKEIGFINYYGMQ 378
Query: 433 RFGKGRKVHTDQIGLALLKNEMMKAIKLFLTPEDLDDP--VNRAKKYFLQTEDAKGTLSL 490
RFG V T Q+G A+L+N + + L L P + + + ++ + +T+D L
Sbjct: 379 RFGT-TAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAKTKDPTAALRK 437
Query: 491 MPEFKVRERALLEALHRFGMTEEGCIQAWFSLPHSMRIFYVHAYTSKIWNEAVSYRLETY 550
+P + E LL L ++GM + + A+ +P + R+ Y+H+Y S +WN VS R+E Y
Sbjct: 438 LPVKRCVEGQLLRGLSKYGM--KNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEDY 495
Query: 551 GARVVQGDLVCLDEDIDDENFPNSKIHLVTEEEGSANMYAIHQVVLPVLGYNIQYPKNKV 610
G + V GDLV EE N Y+IH VV+P+ G+++ YPK+K+
Sbjct: 496 GLKPVPGDLVLKGATA------------TYIEEDDVNNYSIHDVVMPLPGFDVIYPKHKI 543
Query: 611 GQWYHDILSRDGLQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHI 670
+ Y ++L+ D L + ++ G YR+I+ P N+S++++ D + + +
Sbjct: 544 QEAYREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDV 603
Query: 671 DETA-------------LSLLISFDLDASCYATVCLKEIMKHD 700
D +L + F L S YAT+ ++E++K D
Sbjct: 604 DNLEGKTPPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMD 646
Score = 31.2 bits (69), Expect = 3.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 16 FFNDHVGFHGTIKSSPSDFIVIEIDEQGQL 45
F + H GF G +K SDF+V EI + G++
Sbjct: 119 FVSSHQGFSGILKERYSDFVVHEIGKDGRI 148
>gi|38524622 formin binding protein 1 [Homo sapiens]
Length = 617
Score = 34.3 bits (77), Expect = 0.40
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 32/138 (23%)
Query: 286 KRGKRPLSECQEGKVIYTAFTLRKENLEMFEAIGF-LAIKLGVIPSDFSYAGLKDKKAIT 344
K+ K PLS + F K + F ++ L++KLG P DFS + +
Sbjct: 361 KQQKEPLSHR------FNEFMTSKPKIHCFRSLKRGLSLKLGATPEDFSNLPPEQR---- 410
Query: 345 YQAMVVRKVTPERLKNIEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQIN 404
RK +++ + KEI+K+ +D + ++K D+ ++N Q+
Sbjct: 411 ------RKKLQQKVDELNKEIQKE---------MDQRDAITKMK----DVYLKN--PQMG 449
Query: 405 DSANLRERIMEAIENVKK 422
D A+L ++ E +N++K
Sbjct: 450 DPASLDHKLAEVSQNIEK 467
>gi|153792012 DNA polymerase zeta [Homo sapiens]
Length = 3130
Score = 34.3 bits (77), Expect = 0.40
Identities = 41/190 (21%), Positives = 72/190 (37%), Gaps = 30/190 (15%)
Query: 113 DGTSKCEEKADVLSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQR 172
DGT + E+ + + + +N D +++ I LP IG LD +
Sbjct: 901 DGTLETEQSFGLYGNKYTLRAKRKVNYETEDSESSFVTHNSKISLPHPMEIGESLDGTLK 960
Query: 173 ASLHSAIRQKFPFLVTV--------GKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDA 224
+ + +K P ++ G+ + +V ++ KE ++ EE + +K L
Sbjct: 961 SRKRRKMSKKLPPVIIKYIIINRFRGRKNMLVKLGKIDSKEK-QVILTEEKMELYKKLAP 1019
Query: 225 KKE---------NSKFTFKPDTNK--DHRKAVHHFVNKKFGNLVETKSFSKMNCSAGNPN 273
K+ +K+ P T K RK+ H KK G T N N
Sbjct: 1020 LKDFWPKVPDSPATKYPIYPLTPKKSHRRKSKHKSAKKKTGKQQRT----------NNEN 1069
Query: 274 VVVTVRFREK 283
+ T+ FR+K
Sbjct: 1070 IKRTLSFRKK 1079
>gi|58530840 desmoplakin isoform I [Homo sapiens]
Length = 2871
Score = 33.9 bits (76), Expect = 0.53
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 354 TPERLKNIEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERI 413
T E L+ + E+E R + + +S++ L+ HF I + + +N+S ER+
Sbjct: 1650 TQEELRRLSSEVEALRRQLLQEQ---ESVKQAHLRNEHFQKAIEDKSRSLNESKIEIERL 1706
Query: 414 MEAIENVKKK 423
EN+ K+
Sbjct: 1707 QSLTENLTKE 1716
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.53
Identities = 21/107 (19%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 357 RLKNIEKEIEKKRMNVFNIRSVDDSLRLGQ-LKGNHFDIVIRNLKKQINDSANLRERIME 415
+L+ E+E ++KR + + ++ + R + L NH + R+ + I++ ++++ + +
Sbjct: 564 QLQVAEQEYKEKRRKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYISNMEDVKQELQQ 623
Query: 416 AIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFL 462
+ KK ++ + G ++ + L LL+N+ +K L+L
Sbjct: 624 LRDQESKKNKDHFETLKNLENGFYINDQKADLLLLENKKLKEYILYL 670
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.53
Identities = 21/107 (19%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 357 RLKNIEKEIEKKRMNVFNIRSVDDSLRLGQ-LKGNHFDIVIRNLKKQINDSANLRERIME 415
+L+ E+E ++KR + + ++ + R + L NH + R+ + I++ ++++ + +
Sbjct: 564 QLQVAEQEYKEKRRKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYISNMEDVKQELQQ 623
Query: 416 AIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFL 462
+ KK ++ + G ++ + L LL+N+ +K L+L
Sbjct: 624 LRDQESKKNKDHFETLKNLENGFYINDQKADLLLLENKKLKEYILYL 670
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 33.9 bits (76), Expect = 0.53
Identities = 21/107 (19%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 357 RLKNIEKEIEKKRMNVFNIRSVDDSLRLGQ-LKGNHFDIVIRNLKKQINDSANLRERIME 415
+L+ E+E ++KR + + ++ + R + L NH + R+ + I++ ++++ + +
Sbjct: 564 QLQVAEQEYKEKRRKLEELSNIITAQRQEEDLLNNHIFLFTRDFSRYISNMEDVKQELQQ 623
Query: 416 AIENVKKKGFVNYYGPQRFGKGRKVHTDQIGLALLKNEMMKAIKLFL 462
+ KK ++ + G ++ + L LL+N+ +K L+L
Sbjct: 624 LRDQESKKNKDHFETLKNLENGFYINDQKADLLLLENKKLKEYILYL 670
>gi|223718222 fibronectin type III and SPRY domain containing 1-like
isoform 3 [Homo sapiens]
Length = 530
Score = 32.7 bits (73), Expect = 1.2
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 47 NKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSE 106
N T+D+ F IS I + P + + + + +S +N E+ I D H +
Sbjct: 13 NVTVDKACFLISNITIGPESINLQQEALQRIISTLANKNDEIQNFI-----DTLHHTLKG 67
Query: 107 KEDTIVDGTSKCEEKADVLSSFLDEKTHELLN 138
++ + S+ +E+ D L S LDE ++N
Sbjct: 68 VQENSSNILSELDEEFDSLYSILDEVKESMIN 99
>gi|221316754 exophilin 5 isoform c [Homo sapiens]
Length = 1801
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 47 NKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSE 106
N ++D P+ + + + K P L + G+NQ+ ++ +++ + + S
Sbjct: 704 NSSLDAPVVPSTTVFSRRSPSDKDPSLGEREEKDNAGKNQKNQFIVSHSENQERNDSPVP 763
Query: 107 KEDTIVDGTSKCEEKADVLSSFLDEK-THELLNNFACDVREKWLSKTELIGLP 158
D +VD KC S F +E+ ++ ++ +C + LSKTE I +P
Sbjct: 764 THDEVVD--VKCHSH----SPFRNERGKGKIRHHISCIEK---LSKTESISVP 807
>gi|221316751 exophilin 5 isoform b [Homo sapiens]
Length = 1913
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 47 NKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSE 106
N ++D P+ + + + K P L + G+NQ+ ++ +++ + + S
Sbjct: 816 NSSLDAPVVPSTTVFSRRSPSDKDPSLGEREEKDNAGKNQKNQFIVSHSENQERNDSPVP 875
Query: 107 KEDTIVDGTSKCEEKADVLSSFLDEK-THELLNNFACDVREKWLSKTELIGLP 158
D +VD KC S F +E+ ++ ++ +C + LSKTE I +P
Sbjct: 876 THDEVVD--VKCHSH----SPFRNERGKGKIRHHISCIEK---LSKTESISVP 919
>gi|119395738 insulin receptor isoform Short precursor [Homo sapiens]
Length = 1370
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 388 KGNHFDIV-----IRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFGKGRKVHT 442
+GN DI+ R K +N+SA+LRERI E KGF ++ + G K
Sbjct: 1027 EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 1086
Query: 443 DQIGLALLKNEMMKAIKLFLTPEDLDDP 470
+ + L+ + +K+ L PE ++P
Sbjct: 1087 TLVVMELMAHGDLKSYLRSLRPEAENNP 1114
>gi|119395736 insulin receptor isoform Long precursor [Homo sapiens]
Length = 1382
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 388 KGNHFDIV-----IRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGPQRFGKGRKVHT 442
+GN DI+ R K +N+SA+LRERI E KGF ++ + G K
Sbjct: 1039 EGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 1098
Query: 443 DQIGLALLKNEMMKAIKLFLTPEDLDDP 470
+ + L+ + +K+ L PE ++P
Sbjct: 1099 TLVVMELMAHGDLKSYLRSLRPEAENNP 1126
>gi|221316747 exophilin 5 isoform a [Homo sapiens]
Length = 1989
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 47 NKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGDQNHQSGSE 106
N ++D P+ + + + K P L + G+NQ+ ++ +++ + + S
Sbjct: 892 NSSLDAPVVPSTTVFSRRSPSDKDPSLGEREEKDNAGKNQKNQFIVSHSENQERNDSPVP 951
Query: 107 KEDTIVDGTSKCEEKADVLSSFLDEK-THELLNNFACDVREKWLSKTELIGLP 158
D +VD KC S F +E+ ++ ++ +C + LSKTE I +P
Sbjct: 952 THDEVVD--VKCHSH----SPFRNERGKGKIRHHISCIEK---LSKTESISVP 995
>gi|103471995 serum response factor binding protein 1 [Homo sapiens]
Length = 429
Score = 32.0 bits (71), Expect = 2.0
Identities = 56/244 (22%), Positives = 93/244 (38%), Gaps = 40/244 (16%)
Query: 38 EIDEQGQLVNKTIDEPIFKISEIQLEPN-----NFPKKPKLDLQNLSLEDGRNQEVHTLI 92
++ E L K I KI++++ P N P KP +SLE + L
Sbjct: 169 KVKETKILAKKPIHNSKEKIAKMEHGPKAVTIANSPSKPSEKDSVVSLESQKTPADPKLK 228
Query: 93 KYTDGDQNHQSGSEKEDTIVDGTSKCEEKADVLSSFLDEKTHELLNNFACDVREKWLSKT 152
+ +N S S G CEE+ + + D+ T E K S +
Sbjct: 229 TLSQTKKNKGSDSSLSGNSDGGEEFCEEEKE----YFDDSTEERF--------YKQSSMS 276
Query: 153 ELIGLPPEFSIGRI-LDKNQRASLHSAIRQKFP----FL-----VTVGKNSEIVVKPNLE 202
E +F IG++ + + +S HS+++++ P FL T G +KP+ E
Sbjct: 277 EDSDSGDDFFIGKVRRTRKKESSCHSSVKEQKPLEKVFLKEDTGETHGDTRNDKIKPSTE 336
Query: 203 YKELCHLVSEEEAFDFFKYLDAK------KENSKFTFKPDTNKDHRKAVHHFVNKKFGNL 256
++L E+ F +K KE + T D ++ + + F K G L
Sbjct: 337 TRKL-------ESVFFHSLSGSKSSRRNFKEQAPKTRSLDFPQNEPQIKNQFNKKLSGRL 389
Query: 257 VETK 260
TK
Sbjct: 390 ENTK 393
>gi|145309326 laminin, gamma 1 precursor [Homo sapiens]
Length = 1609
Score = 31.6 bits (70), Expect = 2.6
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 344 TYQAMVVRKVTPERLKNIEKEIEKKRMNVFNIRSVDDSL--RLGQLKGNHFDIV--IRNL 399
T MV + +RLK E+E+ +++ VD +L RL ++ + ++N+
Sbjct: 1061 TGDEMVTDQAFEDRLKEAEREVMDLLREAQDVKDVDQNLMDRLQRVNNTLSSQISRLQNI 1120
Query: 400 KKQINDSANLRERIMEAIENVKK 422
+ I ++ NL E+ +EN ++
Sbjct: 1121 RNTIEETGNLAEQARAHVENTER 1143
>gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog A
[Homo sapiens]
Length = 771
Score = 30.8 bits (68), Expect = 4.5
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 23/109 (21%)
Query: 38 EIDEQGQ---LVNKTIDEPIFKISEIQLEPNNFPKKPK--------LDLQNLSLEDG--- 83
E++E G+ NK + P+ + + + PNN P PK +DLQNL
Sbjct: 513 ELEELGKEECFQNKELPRPVLEGQQSERTPNNRPDAPKEKKKKEQMIDLQNLLTTQSPSV 572
Query: 84 RNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEEKADVLSSFLDEK 132
++ V T+ + D ++ + KE D DV+ FL EK
Sbjct: 573 KSLAVPTIEELEDEEERNHRQMIKEAFAGD---------DVIRDFLKEK 612
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 30.4 bits (67), Expect = 5.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 56 KISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYT------DGDQNHQSGSEKED 109
K S +QLE + KLD ++L RNQ++ T + DG Q+ S E+
Sbjct: 456 KKSALQLEQQVKELQEKLDEEHLEAASQRNQQLETQLSLVALPGEGDGGQHLDSEEEEAP 515
Query: 110 TIVDGTSKCEEKADVLSSFLD 130
+ E + SSF+D
Sbjct: 516 RPTPNIPEDLESREATSSFMD 536
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 30.4 bits (67), Expect = 5.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 56 KISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYT------DGDQNHQSGSEKED 109
K S +QLE + KLD ++L RNQ++ T + DG Q+ S E+
Sbjct: 456 KKSALQLEQQVKELQEKLDEEHLEAASQRNQQLETQLSLVALPGEGDGGQHLDSEEEEAP 515
Query: 110 TIVDGTSKCEEKADVLSSFLD 130
+ E + SSF+D
Sbjct: 516 RPTPNIPEDLESREATSSFMD 536
>gi|38570109 CAP-binding protein complex interacting protein 1 isoform
b [Homo sapiens]
Length = 1349
Score = 30.4 bits (67), Expect = 5.8
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 623 LQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHIDETALSLLISFD 682
LQ C L+ I GC+RQ+LK E + DV +G L+L+ F+
Sbjct: 1155 LQNCDPIESRLRKRIQGCWRQLLK----------ECKEKDVARQGDINASDFLALVEKFN 1204
Query: 683 LDASCYATVCLKEIMKHDV 701
LD S C + I+K+D+
Sbjct: 1205 LDIS--KEECQQLIIKYDL 1221
>gi|38570107 CAP-binding protein complex interacting protein 1 isoform
a [Homo sapiens]
Length = 1501
Score = 30.4 bits (67), Expect = 5.8
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 623 LQTCRFKVPTLKLNIPGCYRQILKHPCNLSYQLMEDHDIDVKTKGSHIDETALSLLISFD 682
LQ C L+ I GC+RQ+LK E + DV +G L+L+ F+
Sbjct: 1307 LQNCDPIESRLRKRIQGCWRQLLK----------ECKEKDVARQGDINASDFLALVEKFN 1356
Query: 683 LDASCYATVCLKEIMKHDV 701
LD S C + I+K+D+
Sbjct: 1357 LDIS--KEECQQLIIKYDL 1373
>gi|10190702 MRS2-like, magnesium homeostasis factor [Homo sapiens]
Length = 443
Score = 30.4 bits (67), Expect = 5.8
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 440 VHTDQIGLALLKNEMMKAIKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRER 499
++T Q L++L+ +++ + + P+ V+R+K + L ++ K L + K+ +
Sbjct: 197 INTLQGKLSILQPLILETLDALVDPKH--SSVDRSKLHIL-LQNGKSLSELETDIKIFKE 253
Query: 500 ALLEALHRFGMTEEGCIQAW 519
++LE L + EE C+ W
Sbjct: 254 SILEILDEEELLEELCVSKW 273
>gi|30795238 ATP-binding cassette, sub-family A, member 12 isoform a
[Homo sapiens]
Length = 2595
Score = 30.0 bits (66), Expect = 7.6
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 42 QGQLVNKTIDEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQEVHTLIKYTDGD 98
Q L K ID+ +FK SEI + +N K L Q+ + + R+ + T+ D
Sbjct: 90 QDLLRRKGIDDALFKDSEILRKSSNLDKDSSLSFQSTQVPERRHASLATVFPSPSSD 146
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 30.0 bits (66), Expect = 7.6
Identities = 54/254 (21%), Positives = 100/254 (39%), Gaps = 23/254 (9%)
Query: 68 PKKPKLDLQN---LSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEEKADV 124
P+K K L+N L +D + +L+K + EK + E+K V
Sbjct: 690 PQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKTPS--------EDKLSV 741
Query: 125 LSSFLDEKTHELLNNFACDVREKWLSKTELIGLPPEFSIGRILDKNQRASLHSAIRQKFP 184
+ + H+ + EK L E I + + DK +R S H R+
Sbjct: 742 KHKYKGDCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNERK--- 798
Query: 185 FLVTVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDTNKDHRKA 244
L +GK+ KP EY +E + L A+K +K K + D +
Sbjct: 799 -LSVLGKDG----KPVSEYIIKTDENVRKENNKKERRLSAEK--TKAEHKSRRSSDSKIQ 851
Query: 245 VHHFVNKKFGNLVE--TKSFSKMNCSAGNPNVVVTVRFREKAHKRGKRPLSECQEGKVIY 302
+K+ G ++ ++S+S+ C + N+ ++ E HK +R S +E V+
Sbjct: 852 KDSLGSKQHGITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLK 911
Query: 303 TAFTLRKENLEMFE 316
+ + + +++ E
Sbjct: 912 SKSKTQGKQVKVVE 925
>gi|28372531 protein phosphatase 4, regulatory subunit 2 [Homo
sapiens]
Length = 417
Score = 29.6 bits (65), Expect = 9.9
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 77 NLSLEDGRNQEVHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEEKADVLSSFLDEKTHEL 136
N + NQ + + + D H GSE E + +S C E +++ S KT E+
Sbjct: 336 NEETSEENNQMEESDVSQAEKDLLHSEGSENEGPVSSSSSDCRETEELVGS-NSSKTGEI 394
Query: 137 LN 138
L+
Sbjct: 395 LS 396
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 29.6 bits (65), Expect = 9.9
Identities = 24/116 (20%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 38 EIDEQGQLVNKTI---DEPIFKISEIQLEPNNFPKKPKLDLQNLSLEDGRNQE------- 87
++ E G+ +N+T +E + + S+++ N+ +L+L++L+ E G+ Q
Sbjct: 1437 QLRELGRQLNQTTGKAEEAMQEASDLKKIKRNY----QLELESLNHEKGKLQREVDRITR 1492
Query: 88 VHTLIKYTDGDQNHQSGSEKEDTIVDGTSKCEEKADVLSSFLDEKTHELLNNFACD 143
H + + N Q S +++ ++ C+ K+D L ++ +LL N +
Sbjct: 1493 AHAVAEKNIQHLNSQIHSFRDEKELERLQICQRKSDHLKEQFEKSHEQLLQNIKAE 1548
>gi|4505001 LIM domain kinase 1 [Homo sapiens]
Length = 647
Score = 29.6 bits (65), Expect = 9.9
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 28/116 (24%)
Query: 327 VIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNIEKEIEKKRMNV-----------FNI 375
V+ +DF A L MV K PE L++++K KKR V N
Sbjct: 474 VVVADFGLARL----------MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 523
Query: 376 RSVDDSLRLGQLKGNHFDIVIRNLKKQINDSANLRERIMEAIENVKKKGFVNYYGP 431
RS D+ + + F IV+ + ++N + R M+ NV +GF++ Y P
Sbjct: 524 RSYDEKVDVFS-----FGIVLCEIIGRVNADPDYLPRTMDFGLNV--RGFLDRYCP 572
>gi|4758206 dual specificity phosphatase 2 [Homo sapiens]
Length = 314
Score = 29.6 bits (65), Expect = 9.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 278 VRFREKAHKRGKRPLSECQEG----KVIYTAFTLRKENLEMFEAIGFLAIKLGVIPSDFS 333
+ F + G R L CQ G I A+ ++ + + EA F+ + GVI +FS
Sbjct: 240 IGFIDWVKNSGGRVLVHCQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFS 299
Query: 334 YAG 336
+ G
Sbjct: 300 FMG 302
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,032,814
Number of Sequences: 37866
Number of extensions: 1164160
Number of successful extensions: 3009
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2988
Number of HSP's gapped (non-prelim): 40
length of query: 701
length of database: 18,247,518
effective HSP length: 109
effective length of query: 592
effective length of database: 14,120,124
effective search space: 8359113408
effective search space used: 8359113408
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.