Guide to the Human Genome
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Name: TMEM175 Sequence: fasta or formatted (504aa) NCBI GI: 14150104
Description:

transmembrane protein 175

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         52           3
 C cysteine            2.6         13           1
 D aspartate           3.8         19           2
 E glutamate           3.4         17           1
 F phenylalanine       6.7         34           2
 G glycine             5.2         26           2
 H histidine           3.2         16           2
 I isoleucine          4.8         24           2
 K lysine              1.4          7           1
 L leucine            15.3         77           3
 M methionine          2.4         12           2
 N asparagine          0.6          3           1
 P proline             6.7         34           3
 Q glutamine           4.4         22           2
 R arginine            6.0         30           2
 S serine              6.3         32           1
 T threonine           6.0         30           2
 V valine              8.1         41           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 175 
ALG10                 0.009   asparagine-linked glycosylation 10 homolog (yeast, ...
OR51Q1                0.008   olfactory receptor, family 51, subfamily Q, member 1...
FZD5                  0.006   frizzled 5 precursor 
LOC100293961          0.006   PREDICTED: hypothetical protein 
LOC100290753          0.006   PREDICTED: hypothetical protein XP_002346471 
LOC100289293          0.006   PREDICTED: hypothetical protein XP_002342302 
FZD10                 0.006   frizzled 10 
ADCY6                 0.006   adenylate cyclase 6 isoform b 
HMCN2                 0.005   PREDICTED: hemicentin 2 
HMCN2                 0.005   PREDICTED: hemicentin 2 
HMCN2                 0.005   PREDICTED: hemicentin 2 
GLT8D2                0.005   glycosyltransferase 8 domain containing 2 
RAPH1                 0.005   Ras association and pleckstrin homology domains 1 is...
ALG10B                0.004   asparagine-linked glycosylation 10 homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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