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Search of human proteins with 14589880
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14589880 protocadherin gamma subfamily A, 3 isoform 1
precursor [Homo sapiens]
(932 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1835 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1581 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1429 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1420 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1412 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1399 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1389 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1386 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1384 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1382 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1376 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1361 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1333 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1175 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1169 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1159 0.0
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1147 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1136 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1132 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1132 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1130 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1122 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1110 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1081 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 933 0.0
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs... 915 0.0
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 909 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 905 0.0
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs... 904 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 903 0.0
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1835 bits (4754), Expect = 0.0
Identities = 932/932 (100%), Positives = 932/932 (100%)
Query: 1 MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60
MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA
Sbjct: 1 MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60
Query: 61 ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120
ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE
Sbjct: 61 ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120
Query: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180
IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL
Sbjct: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180
Query: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240
AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP
Sbjct: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240
Query: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300
MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE
Sbjct: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300
Query: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360
VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG
Sbjct: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360
Query: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420
TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI
Sbjct: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420
Query: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480
SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD
Sbjct: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480
Query: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540
SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP
Sbjct: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540
Query: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720
TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720
Query: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
SQESCEKSEPLLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
Sbjct: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN 840
Query: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
Sbjct: 841 NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
Query: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 901 NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1581 bits (4094), Expect = 0.0
Identities = 808/808 (100%), Positives = 808/808 (100%)
Query: 1 MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60
MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA
Sbjct: 1 MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60
Query: 61 ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120
ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE
Sbjct: 61 ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120
Query: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180
IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL
Sbjct: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180
Query: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240
AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP
Sbjct: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240
Query: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300
MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE
Sbjct: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300
Query: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360
VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG
Sbjct: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360
Query: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420
TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI
Sbjct: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420
Query: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480
SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD
Sbjct: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480
Query: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540
SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP
Sbjct: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540
Query: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720
TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720
Query: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQ 808
SQESCEKSEPLLITQDLLEMKGDSNLLQ
Sbjct: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQ 808
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1429 bits (3700), Expect = 0.0
Identities = 727/922 (78%), Positives = 790/922 (85%)
Query: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
R L LLC LL TL E +GQIRYSV EE+D+GSFVGNIA DLGLEP LAE+GVRIVSRG
Sbjct: 11 RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70
Query: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
R+QLF+LNP+SGSLVTA RIDREELCAQ CL+ NIL+EDKL I+ VE+EI DINDNA
Sbjct: 71 RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130
Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
P F EELE+KI E T PG R P+K A D DVG N+LQ Y L+PND+FSL V ++G K
Sbjct: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190
Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
YPELVLER+LDRE++ +H LVLVASDGGDPV SG I V VLDANDN P+FTQPEYR+S
Sbjct: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250
Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
+ EN VGTR+LTV ATD DEG+ AQV Y L+K PG+ +E+F L S SGE++I+K LDYE
Sbjct: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310
Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
DA F+EI IEAQDGPGLL+RAK++VTVLDVNDNAPE +TS TSSV E+ G I L +
Sbjct: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370
Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
VHDRDSGQN + +LPFKLEKS+D YYRLVT +LDREQ S YNI+L A DGG+P
Sbjct: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430
Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
LST+ HI L V DINDN P F SYS YIPENNPRGAS+FSVTA DPDSN+NA +TY+
Sbjct: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490
Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
EDT+QGAPLSS++SINS+TGVLYALRSFDYEQ RDL++ V A DSGNPPLSSNVSL+L
Sbjct: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
FVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVADRIPD
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
ILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
L SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK +
Sbjct: 731 SLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDF 790
Query: 791 LLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
L Q LLE + + QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 791 LSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 RDGKAPAGGNGNKKKSGKKEKK 932
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1420 bits (3676), Expect = 0.0
Identities = 716/920 (77%), Positives = 795/920 (86%), Gaps = 1/920 (0%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L +C LLG L E + QI YSV EE ++GS VGNIA DLGL PRELAERGVRIVSRGRT
Sbjct: 13 LLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLF+LNP+SG+LVTA RIDREELC + P C+ + IL+ED +KI VE+EI D+NDN P+
Sbjct: 73 QLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPS 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F TE+ EIK+ E PG RFP+ AFDPDVG+NSLQ Y+L+ N YFSL V S ++G KYP
Sbjct: 133 FGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLERALDRE++ +H LVL A DGGDPV SG I +I++D NDN P+FTQPEY VSV
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
ENVPVGTRLLTV ATDPDEG N V+Y K+ KI+++F LNS+SG+++IL LDYED+
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDS 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FY+I +EA DGPGL +R+K+LVTVLD NDNAPE+T+TSLTSSV E + G IAL +VH
Sbjct: 313 GFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D DSG NG V + NLPF LEK+ YYRL+T +LDRE++SEYNI++ A+D G+PPL
Sbjct: 373 DSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STETHI+L V+DINDNPPTFPH SYSAYIPENNPRGASI S+TAQDPDS +NARITY+L
Sbjct: 433 STETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLA 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT QGAPLSS+VSINSNTG+LYAL SFDYEQFRDL+LL+TASDSG+PPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY LLK+S
Sbjct: 553 LDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVAD IPD+L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+LRRWHKSRLL A G L
Sbjct: 673 ADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSRL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
A P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEPLL 792
Query: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
ITQDLLE KGD N LQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 ITQDLLETKGDPN-LQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 912 GKAPAGGNGNKKKSGKKEKK 931
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1412 bits (3656), Expect = 0.0
Identities = 717/918 (78%), Positives = 792/918 (86%)
Query: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
LL LLGTL + QIRYS+ EEL+KGSFVGNI DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
Query: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
FSLNP++GSLVTA RIDREELCAQ P CLV NILVEDKL ++ VE+EI DINDN P F
Sbjct: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
EELE+KI E P +RFP+ +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
VLE LDRE + +++LVL A DGGDPV S I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
+PVGT +L V ATD DEG + +V+Y K+ KI++IF LN ++GE+S +LDYED+ F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
YE+ +EA+DGPGL RAK+L+T+LDVNDN PE+ +TS + ++ E G IAL V DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
DSG NG V + +LPF+LEKS+ YYRLVT +LDRE++ YNI++ A+D G+PPLST
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
Query: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794
PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
Query: 795 QDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
QDLLE KG+ LQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
Sbjct: 795 QDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA 854
Query: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
Sbjct: 855 SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK 914
Query: 915 APAGGNGNKKKSGKKEKK 932
APAGGNGNKKKSGKKEKK
Sbjct: 915 APAGGNGNKKKSGKKEKK 932
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1399 bits (3620), Expect = 0.0
Identities = 702/922 (76%), Positives = 798/922 (86%)
Query: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
RG LL LLGT E +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
Query: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
RTQLF+LN +SGSLVTA RIDREE+CAQ CLV NIL+EDK+ ++ +++EI DINDN
Sbjct: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
P F TEE+ +KI E T PG RFP+ A DPDVG NSLQ+Y+LSPN +FSLAV S + K
Sbjct: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
YPELVLER LDRE++ +H LVL ASDGGDP S HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
V ENVPVGTRLLTV+A D DEG N +V+Y K+ K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
+ FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+ +G IAL
Sbjct: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
+ DRDSG+NG+V + NLPFKLEKSID YYRLVT +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
+LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++
Sbjct: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790
Query: 791 LLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
LL + D E K + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
Sbjct: 791 LLTSVDFQECKENLPSIQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA 850
Query: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK
Sbjct: 851 MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK 910
Query: 911 RDGKAPAGGNGNKKKSGKKEKK 932
RDGKAPAGGNGNKKKSGKKEKK
Sbjct: 911 RDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1389 bits (3594), Expect = 0.0
Identities = 703/921 (76%), Positives = 778/921 (84%)
Query: 12 GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71
GL LLC G E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 16 GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75
Query: 72 TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131
TQLFSLNP+SGSL+TA RIDREELCAQ C+V NILVED++K+F +EIE+ DINDNAP
Sbjct: 76 TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135
Query: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191
F E L++KI E G RFP+ A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195
Query: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251
PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255
Query: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311
EN+PVGT+LLTV ATD DEG N +V+Y K+P F LN +GE+ I ++LDYE+
Sbjct: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315
Query: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371
FYEI+I+A+DG L+ AK+L+TV DVNDN+PE+TITSL S V E+ +G +AL++V
Sbjct: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375
Query: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431
HD DS QNGQV +L LPFKLEKSID YYRLV +LDREQ+S YNI++ A+DGGSPP
Sbjct: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435
Query: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491
LSTE H L V DINDNPPTF +SY YIPENN RGASIFSVTA DPDS NA+I Y+L
Sbjct: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495
Query: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551
EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671
SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731
LADLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735
Query: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791
L GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795
Query: 792 LITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 851
+ D D+ L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM
Sbjct: 796 SLLDDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAM 855
Query: 852 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 911
ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
Sbjct: 856 ILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR 915
Query: 912 DGKAPAGGNGNKKKSGKKEKK 932
DGKAPAGGNGNKKKSGKKEKK
Sbjct: 916 DGKAPAGGNGNKKKSGKKEKK 936
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1386 bits (3587), Expect = 0.0
Identities = 702/920 (76%), Positives = 784/920 (85%), Gaps = 1/920 (0%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L L LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLF+LNP+SGSLVTA RIDREELCAQ PLC+V NILVE+K+KI+ VE+EI DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F EEL++K+ E GTR + A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLE+ LDREK+ +H L+L A DGGDPV SG HI+V VLDANDN P+FT EY VSV
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
EN+PVGTRLL + ATDPDEG N +++Y KI+E F L+S GE+S L+SLDYE++
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FY +++ AQDG L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+ G IAL VH
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D DSG+NG++ + NLPFKLEKS+D YY L+T LDRE+ S+YNI+L D G+PPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STE+HI L V D+NDNPP FP SYS + ENNPRG SIFSVTA DPDS +NAR+TY+L
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
A P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
Query: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
++ D ++ + +QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 MS-DKVDANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 912 GKAPAGGNGNKKKSGKKEKK 931
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1384 bits (3582), Expect = 0.0
Identities = 704/920 (76%), Positives = 778/920 (84%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P
Sbjct: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F E+LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLERALDRE++ H LVL ASDGG P S + I V VLD NDN P+F P YRV V
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
EN+P GTRLLTV A+DPDEG N +V+Y K+ K +F LN +GE+SI KSLDYE+
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FYE++I+A+D LL R K+L++V DVNDN PE+ ITSL S V E G IA + VH
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D+DSG+NGQV + NLPFKLEKSI YYRLVT LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS NA++TY++T
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
+LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
Query: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
+ D E K +++ QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 TSVDFHEYKNEADHGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1382 bits (3577), Expect = 0.0
Identities = 703/920 (76%), Positives = 784/920 (85%), Gaps = 1/920 (0%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L LLC L L E G+G I YSV EE DKGSFVGNIA DLGL+P+ELA+ GVRIVSRGR
Sbjct: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
LF+LNP+SGSL+TA RIDREELCAQ CLV NILVEDK+K+F VE+EI DINDN P
Sbjct: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F EELE K+ E+T PGTR + D DVG+NSLQ+Y+LS N +FSL V ++G ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
E+VL+ LDRE++ +H L+L ASDGG+PV SG L I + V+DANDNPP FTQ +Y ++V
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
ENVP+GT+LL VNATDPDEG N +V+Y + ++A+IF L+S +GE+S + LD+E+
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Y ++++AQDG GL+++ K+L+ VLDVNDNAPE+TITS+T++VPE G IALI VH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D+DSG NG F+ GNLPFKLEK +D YYRLVT +LDRE IS YNI++ A D G+P L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STETHI+L V DINDN P F SYSAYIPENNPRGASIFSV A D DSN NA+ITY+L
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT+QGAPLS+++SINS+TGVLYALRSFDYEQFRD++L V A DSG+PPLSSNVSL+LF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI DIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
AS PGSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK L
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
Query: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Q LLE K + QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 APQSLLEDKKEP-FSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 851
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 852 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 911
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 912 GKAPAGGNGNKKKSGKKEKK 931
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1376 bits (3562), Expect = 0.0
Identities = 697/925 (75%), Positives = 786/925 (84%)
Query: 8 RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
R+ +GL LL LLGTL ETG QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
Query: 68 SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
RGRTQLF+LNP+SGSLVTA RIDREELC C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
Query: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
DNAP F ELEIKI E RFP+ A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
Query: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
G+KYPELVL+RALDRE+K H LVL ASDGGDPV +G I+V+VLDANDN P F QPEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
Query: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
R SV EN+ +GT+LL VNATDPDEG NA+V Y + K A++F L+ SG +S + L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
Query: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
D+E++ FY+++++A D G +RAK+L+TVLDVNDNAPE+ +TSL SSVPE G IA
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
Query: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
L++V+D+DS +NGQV F+ GNLPFKLEKS YY LVT LDREQ+ YNI++ A+D
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
Query: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
G+PPLSTETHI+L+V D NDNPP FP SYSAYIPENNPRG S+ SVTA DPD NA+I
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
Query: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
Query: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
Query: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
Query: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
SGGGL P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
Query: 788 SEPLLITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847
SEPLL++ D + K L++QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM
Sbjct: 788 SEPLLLSGDSVFSKDSHGLIEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEM 847
Query: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907
LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA
Sbjct: 848 LQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNA 907
Query: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932
AGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 908 AGKRDGKAPAGGNGNKKKSGKKEKK 932
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1361 bits (3523), Expect = 0.0
Identities = 691/924 (74%), Positives = 779/924 (84%), Gaps = 2/924 (0%)
Query: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
R L LLC LGTL + QIRYSV EE +KGSFVGNI+ DLGLEPRELA+RGVRIVSRG
Sbjct: 12 RLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRG 71
Query: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
+TQLF++NP+SGSL+TA RIDREELC + C + + +LVED LKI+ VE+EI DINDNA
Sbjct: 72 KTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNA 131
Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
P+F +E+EIK+ E +PG RF + A DPDVG+NSLQ+Y+LSPN+YFSL + ++GAK
Sbjct: 132 PSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAK 191
Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
PELVLE +LDREK+ H L+L A DGGDP+ G + I+V+VLD ND+ PMFTQ YRVS
Sbjct: 192 NPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVS 251
Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
V EN+ GTR+L VNATDPDEG N +V Y M K +EIF L+S +GEV + SLD+E
Sbjct: 252 VPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFE 311
Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
FYE++I+ QDG GL + +L+TV+DVNDNAPEITITS +S+ E G IAL++
Sbjct: 312 KYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLN 371
Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
V D+DSG+NGQV F+ +LPFKLEK+ YY+L+T+ LDRE + YNI+L A+D GSP
Sbjct: 372 VQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSP 431
Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
PLS ETH+ L+V D NDNPP FPH SYSAYIPENNPRGASIFSVTA DPDS NA +TY+
Sbjct: 432 PLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYS 491
Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
LT+DT+QG PLSS+VSINSNTGVLYAL+SFDYEQFRDL+L V A DSG+PPLSSNVSL+L
Sbjct: 492 LTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSL 551
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLK
Sbjct: 552 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLK 611
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 612 ASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 671
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
+LADLGSLE A SDL+LYLVVAVAAVSC+FL FVIVLLALRL RWHKSRLLQAS G
Sbjct: 672 VLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEG 731
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
GLA P SHFVG DGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQESCEKSEP
Sbjct: 732 GLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEP 791
Query: 791 LLITQD--LLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 848
LLI +D ++ K D QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML
Sbjct: 792 LLIAEDSAIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEML 851
Query: 849 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 908
QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
Sbjct: 852 QAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA 911
Query: 909 GKRDGKAPAGGNGNKKKSGKKEKK 932
GKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 912 GKRDGKAPAGGNGNKKKSGKKEKK 935
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1333 bits (3450), Expect = 0.0
Identities = 681/920 (74%), Positives = 758/920 (82%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L LLC+LLG L E + QIRYSV EE +KG VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLFSLNP+SG+LVTA RIDREELCAQ P CLV +LVED++K++ +EIE+ DIND+AP
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F E LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLERALDRE+ H LVL ASDGG+P S + I V VLD NDN P+F Q YRV V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
ENVP GT LLT A+D DEG N +V+Y K+ K + +F LN +GE+S KSLDYE+
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FYE++I+A+DG GL K+L++V DVNDN PE+TITSL S V E+ G I L + H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
DRDSG+NGQV + NL F LE S + YYRL+TA LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STE HITL V DINDNPP F SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
A P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
Query: 793 ITQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
++ D D+ L+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI
Sbjct: 793 VSVDSKFPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMI 852
Query: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
Sbjct: 853 LASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD 912
Query: 913 GKAPAGGNGNKKKSGKKEKK 932
GKAPAGGNGNKKKSGKKEKK
Sbjct: 913 GKAPAGGNGNKKKSGKKEKK 932
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1175 bits (3040), Expect = 0.0
Identities = 603/798 (75%), Positives = 666/798 (83%)
Query: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
R L LLC LL TL E +GQIRYSV EE+D+GSFVGNIA DLGLEP LAE+GVRIVSRG
Sbjct: 11 RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70
Query: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
R+QLF+LNP+SGSLVTA RIDREELCAQ CL+ NIL+EDKL I+ VE+EI DINDNA
Sbjct: 71 RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130
Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
P F EELE+KI E T PG R P+K A D DVG N+LQ Y L+PND+FSL V ++G K
Sbjct: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190
Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
YPELVLER+LDRE++ +H LVLVASDGGDPV SG I V VLDANDN P+FTQPEYR+S
Sbjct: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250
Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
+ EN VGTR+LTV ATD DEG+ AQV Y L+K PG+ +E+F L S SGE++I+K LDYE
Sbjct: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310
Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
DA F+EI IEAQDGPGLL+RAK++VTVLDVNDNAPE +TS TSSV E+ G I L +
Sbjct: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370
Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
VHDRDSGQN + +LPFKLEKS+D YYRLVT +LDREQ S YNI+L A DGG+P
Sbjct: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430
Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
LST+ HI L V DINDN P F SYS YIPENNPRGAS+FSVTA DPDSN+NA +TY+
Sbjct: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490
Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
EDT+QGAPLSS++SINS+TGVLYALRSFDYEQ RDL++ V A DSGNPPLSSNVSL+L
Sbjct: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
FVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVADRIPD
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
ILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
L SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK +
Sbjct: 731 SLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDF 790
Query: 791 LLITQDLLEMKGDSNLLQ 808
L Q LLE + + Q
Sbjct: 791 LSAPQSLLEEEREETFSQ 808
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1169 bits (3023), Expect = 0.0
Identities = 591/794 (74%), Positives = 670/794 (84%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L +C LLG L E + QI YSV EE ++GS VGNIA DLGL PRELAERGVRIVSRGRT
Sbjct: 13 LLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLF+LNP+SG+LVTA RIDREELC + P C+ + IL+ED +KI VE+EI D+NDN P+
Sbjct: 73 QLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPS 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F TE+ EIK+ E PG RFP+ AFDPDVG+NSLQ Y+L+ N YFSL V S ++G KYP
Sbjct: 133 FGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLERALDRE++ +H LVL A DGGDPV SG I +I++D NDN P+FTQPEY VSV
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
ENVPVGTRLLTV ATDPDEG N V+Y K+ KI+++F LNS+SG+++IL LDYED+
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDS 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FY+I +EA DGPGL +R+K+LVTVLD NDNAPE+T+TSLTSSV E + G IAL +VH
Sbjct: 313 GFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D DSG NG V + NLPF LEK+ YYRL+T +LDRE++SEYNI++ A+D G+PPL
Sbjct: 373 DSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STETHI+L V+DINDNPPTFPH SYSAYIPENNPRGASI S+TAQDPDS +NARITY+L
Sbjct: 433 STETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLA 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT QGAPLSS+VSINSNTG+LYAL SFDYEQFRDL+LL+TASDSG+PPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDN PEILYP PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY LLK+S
Sbjct: 553 LDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVAD IPD+L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+LRRWHKSRLL A G L
Sbjct: 673 ADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSRL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
A P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEPLL 792
Query: 793 ITQDLLEMKGDSNL 806
ITQDLLE KGD NL
Sbjct: 793 ITQDLLETKGDPNL 806
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1159 bits (2997), Expect = 0.0
Identities = 595/803 (74%), Positives = 672/803 (83%), Gaps = 2/803 (0%)
Query: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
LL LLGTL + QIRYS+ EEL+KGSFVGNI DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
Query: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
FSLNP++GSLVTA RIDREELCAQ P CLV NILVEDKL ++ VE+EI DINDN P F
Sbjct: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
EELE+KI E P +RFP+ +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
VLE LDRE + +++LVL A DGGDPV S I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
+PVGT +L V ATD DEG + +V+Y K+ KI++IF LN ++GE+S +LDYED+ F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
YE+ +EA+DGPGL RAK+L+T+LDVNDN PE+ +TS + ++ E G IAL V DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
DSG NG V + +LPF+LEKS+ YYRLVT +LDRE++ YNI++ A+D G+PPLST
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
Query: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794
PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
Query: 795 QDLLEMKGDSNLLQQA--PPNTD 815
QDLLE KG+ LQ + PP +
Sbjct: 795 QDLLETKGEPRQLQVSFFPPKRE 817
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1147 bits (2966), Expect = 0.0
Identities = 579/801 (72%), Positives = 676/801 (84%)
Query: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
RG LL LLGT E +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
Query: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
RTQLF+LN +SGSLVTA RIDREE+CAQ CLV NIL+EDK+ ++ +++EI DINDN
Sbjct: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
P F TEE+ +KI E T PG RFP+ A DPDVG NSLQ+Y+LSPN +FSLAV S + K
Sbjct: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
YPELVLER LDRE++ +H LVL ASDGGDP S HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
V ENVPVGTRLLTV+A D DEG N +V+Y K+ K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
+ FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+ +G IAL
Sbjct: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
+ DRDSG+NG+V + NLPFKLEKSID YYRLVT +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
+LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++
Sbjct: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790
Query: 791 LLITQDLLEMKGDSNLLQQAP 811
LL + D E K + +Q +P
Sbjct: 791 LLTSVDFQECKENLPSIQVSP 811
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1136 bits (2939), Expect = 0.0
Identities = 577/785 (73%), Positives = 650/785 (82%)
Query: 12 GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71
GL LLC G E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 16 GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75
Query: 72 TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131
TQLFSLNP+SGSL+TA RIDREELCAQ C+V NILVED++K+F +EIE+ DINDNAP
Sbjct: 76 TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135
Query: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191
F E L++KI E G RFP+ A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195
Query: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251
PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255
Query: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311
EN+PVGT+LLTV ATD DEG N +V+Y K+P F LN +GE+ I ++LDYE+
Sbjct: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315
Query: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371
FYEI+I+A+DG L+ AK+L+TV DVNDN+PE+TITSL S V E+ +G +AL++V
Sbjct: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375
Query: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431
HD DS QNGQV +L LPFKLEKSID YYRLV +LDREQ+S YNI++ A+DGGSPP
Sbjct: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435
Query: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491
LSTE H L V DINDNPPTF +SY YIPENN RGASIFSVTA DPDS NA+I Y+L
Sbjct: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495
Query: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551
EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555
Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615
Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671
SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675
Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731
LADLGS E A SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735
Query: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791
L GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795
Query: 792 LITQD 796
+ D
Sbjct: 796 SLLDD 800
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1132 bits (2929), Expect = 0.0
Identities = 576/782 (73%), Positives = 654/782 (83%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L L LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13 LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLF+LNP+SGSLVTA RIDREELCAQ PLC+V NILVE+K+KI+ VE+EI DINDN P
Sbjct: 73 QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F EEL++K+ E GTR + A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLE+ LDREK+ +H L+L A DGGDPV SG HI+V VLDANDN P+FT EY VSV
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
EN+PVGTRLL + ATDPDEG N +++Y KI+E F L+S GE+S L+SLDYE++
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FY +++ AQDG L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+ G IAL VH
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D DSG+NG++ + NLPFKLEKS+D YY L+T LDRE+ S+YNI+L D G+PPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STE+HI L V D+NDNPP FP SYS + ENNPRG SIFSVTA DPDS +NAR+TY+L
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGS++ P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
A P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792
Query: 793 IT 794
++
Sbjct: 793 MS 794
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1132 bits (2927), Expect = 0.0
Identities = 578/789 (73%), Positives = 658/789 (83%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L LLC L L E G+G I YSV EE DKGSFVGNIA DLGL+P+ELA+ GVRIVSRGR
Sbjct: 13 LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
LF+LNP+SGSL+TA RIDREELCAQ CLV NILVEDK+K+F VE+EI DINDN P
Sbjct: 73 PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F EELE K+ E+T PGTR + D DVG+NSLQ+Y+LS N +FSL V ++G ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
E+VL+ LDRE++ +H L+L ASDGG+PV SG L I + V+DANDNPP FTQ +Y ++V
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
ENVP+GT+LL VNATDPDEG N +V+Y + ++A+IF L+S +GE+S + LD+E+
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
Y ++++AQDG GL+++ K+L+ VLDVNDNAPE+TITS+T++VPE G IALI VH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D+DSG NG F+ GNLPFKLEK +D YYRLVT +LDRE IS YNI++ A D G+P L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STETHI+L V DINDN P F SYSAYIPENNPRGASIFSV A D DSN NA+ITY+L
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT+QGAPLS+++SINS+TGVLYALRSFDYEQFRD++L V A DSG+PPLSSNVSL+LF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI DIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
AS PGSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK L
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792
Query: 793 ITQDLLEMK 801
Q LLE K
Sbjct: 793 APQSLLEDK 801
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1130 bits (2924), Expect = 0.0
Identities = 579/793 (73%), Positives = 653/793 (82%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13 LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P
Sbjct: 73 QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F E+LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLERALDRE++ H LVL ASDGG P S + I V VLD NDN P+F P YRV V
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
EN+P GTRLLTV A+DPDEG N +V+Y K+ K +F LN +GE+SI KSLDYE+
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FYE++I+A+D LL R K+L++V DVNDN PE+ ITSL S V E G IA + VH
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
D+DSG+NGQV + NLPFKLEKSI YYRLVT LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS NA++TY++T
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
+LGSL+PS PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792
Query: 793 ITQDLLEMKGDSN 805
+ D E K +++
Sbjct: 793 TSVDFHEYKNEAD 805
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1122 bits (2902), Expect = 0.0
Identities = 573/801 (71%), Positives = 662/801 (82%)
Query: 8 RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
R+ +GL LL LLGTL ETG QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8 RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
Query: 68 SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
RGRTQLF+LNP+SGSLVTA RIDREELC C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68 PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
Query: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
DNAP F ELEIKI E RFP+ A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
Query: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
G+KYPELVL+RALDRE+K H LVL ASDGGDPV +G I+V+VLDANDN P F QPEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
Query: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
R SV EN+ +GT+LL VNATDPDEG NA+V Y + K A++F L+ SG +S + L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
Query: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
D+E++ FY+++++A D G +RAK+L+TVLDVNDNAPE+ +TSL SSVPE G IA
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
Query: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
L++V+D+DS +NGQV F+ GNLPFKLEKS YY LVT LDREQ+ YNI++ A+D
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
Query: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
G+PPLSTETHI+L+V D NDNPP FP SYSAYIPENNPRG S+ SVTA DPD NA+I
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
Query: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
Query: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
Query: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
IP +LADLGSLE A SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
Query: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
SGGGL P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
Query: 788 SEPLLITQDLLEMKGDSNLLQ 808
SEPLL++ D + K L++
Sbjct: 788 SEPLLLSGDSVFSKDSHGLIE 808
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1110 bits (2871), Expect = 0.0
Identities = 564/786 (71%), Positives = 650/786 (82%)
Query: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
R L LLC LGTL + QIRYSV EE +KGSFVGNI+ DLGLEPRELA+RGVRIVSRG
Sbjct: 12 RLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRG 71
Query: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
+TQLF++NP+SGSL+TA RIDREELC + C + + +LVED LKI+ VE+EI DINDNA
Sbjct: 72 KTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNA 131
Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
P+F +E+EIK+ E +PG RF + A DPDVG+NSLQ+Y+LSPN+YFSL + ++GAK
Sbjct: 132 PSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAK 191
Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
PELVLE +LDREK+ H L+L A DGGDP+ G + I+V+VLD ND+ PMFTQ YRVS
Sbjct: 192 NPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVS 251
Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
V EN+ GTR+L VNATDPDEG N +V Y M K +EIF L+S +GEV + SLD+E
Sbjct: 252 VPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFE 311
Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
FYE++I+ QDG GL + +L+TV+DVNDNAPEITITS +S+ E G IAL++
Sbjct: 312 KYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLN 371
Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
V D+DSG+NGQV F+ +LPFKLEK+ YY+L+T+ LDRE + YNI+L A+D GSP
Sbjct: 372 VQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSP 431
Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
PLS ETH+ L+V D NDNPP FPH SYSAYIPENNPRGASIFSVTA DPDS NA +TY+
Sbjct: 432 PLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYS 491
Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
LT+DT+QG PLSS+VSINSNTGVLYAL+SFDYEQFRDL+L V A DSG+PPLSSNVSL+L
Sbjct: 492 LTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSL 551
Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLK
Sbjct: 552 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLK 611
Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
ASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 612 ASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 671
Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
+LADLGSLE A SDL+LYLVVAVAAVSC+FL FVIVLLALRL RWHKSRLLQAS G
Sbjct: 672 VLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEG 731
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
GLA P SHFVG DGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQESCEKSEP
Sbjct: 732 GLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEP 791
Query: 791 LLITQD 796
LLI +D
Sbjct: 792 LLIAED 797
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1081 bits (2795), Expect = 0.0
Identities = 555/784 (70%), Positives = 630/784 (80%)
Query: 13 LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
L LLC+LLG L E + QIRYSV EE +KG VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13 LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72
Query: 73 QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
QLFSLNP+SG+LVTA RIDREELCAQ P CLV +LVED++K++ +EIE+ DIND+AP
Sbjct: 73 QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132
Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
F E LE+KI E+ VPG R+P+ A DPDVG+NSLQ+Y+LSPN +FSL V + GA P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192
Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
ELVLERALDRE+ H LVL ASDGG+P S + I V VLD NDN P+F Q YRV V
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252
Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
ENVP GT LLT A+D DEG N +V+Y K+ K + +F LN +GE+S KSLDYE+
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312
Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
FYE++I+A+DG GL K+L++V DVNDN PE+TITSL S V E+ G I L + H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372
Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
DRDSG+NGQV + NL F LE S + YYRL+TA LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432
Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
STE HITL V DINDNPP F SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492
Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552
Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612
Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672
Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
ADLGSL+ A SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+ GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732
Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
A P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792
Query: 793 ITQD 796
++ D
Sbjct: 793 VSVD 796
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 933 bits (2412), Expect = 0.0
Identities = 485/907 (53%), Positives = 629/907 (69%), Gaps = 11/907 (1%)
Query: 30 QIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAER 89
QIRYS+ EEL K S VGN+A DLGL R+L R +R+ + + F++NP+SG L+ ++R
Sbjct: 32 QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89
Query: 90 IDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPG 149
IDRE++C + PLC++ + + E+ L IF + + ++DINDN P F ++ +KIGE T PG
Sbjct: 90 IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149
Query: 150 TRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQ 209
T FP+ A D DVG NSLQ Y L+ N+YF LA +G KYPEL+L+ +LDRE+ +HQ
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209
Query: 210 LVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDP 269
LVL A DGGDP SG I++ V DANDNPP+F+Q YRV++ E+VP G +L V ATD
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269
Query: 270 DEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLS 329
DEG NA+++Y + ++ F+LN +GE++ LD+E A Y + IEA+D L +
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329
Query: 330 RAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGN 389
I V +LD ND APE+ +TS+++ +PE+ G IALI DRDSG+NG+V VLGN
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389
Query: 390 LPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNP 449
F L+ S YY+LVT +LDRE+I EYN+++ A+DGG PPLS+ +TLH+ D+NDN
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449
Query: 450 PTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSINS 509
P F SY ++ ENNP GASI ++A DPD + +++Y++ L+ + S+VS+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509
Query: 510 NTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPALPT 569
+GV++A R+FD+EQ R +L + A D G+P LS+NVSL + V D NDNAP +LYPAL
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569
Query: 570 DGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629
Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDL 689
RAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L DL + P + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688
Query: 690 TLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTPGSHFVGADGVRAF 749
YLVVA+A +S +F VI+ ++LRLR +S GL+S PG +
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPGPGVL--PNYSEG 746
Query: 750 LQTYSHEVSLTADSRKSHLIF----PQPNYADTLISQESCEKSEPLLITQDLLEMKGDSN 805
YS+ + + + S K+ F P+ A L+ + + +
Sbjct: 747 TLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWEQNTNHGAAGV--PFASDT 804
Query: 806 LLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSST 865
+L+QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSST
Sbjct: 805 ILKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSST 864
Query: 866 LGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKK 925
LGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKK
Sbjct: 865 LGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKK 924
Query: 926 SGKKEKK 932
SGKKEKK
Sbjct: 925 SGKKEKK 931
>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 915 bits (2364), Expect = 0.0
Identities = 481/923 (52%), Positives = 633/923 (68%), Gaps = 19/923 (2%)
Query: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
LL TLCE IRYS+ EEL KGS VGN+A DLGL +++ R +R+ +
Sbjct: 21 LLPLFYPTLCEP----IRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKLH-- 74
Query: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
FS++ QSG L+ +RIDRE++C + C +++ +VE+ L IF V + I+D+ND+AP F
Sbjct: 75 FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFR 134
Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
+E+ ++I E G +++A DPD+ +NSL Y+LSPN+YFSL +G KYPEL
Sbjct: 135 KDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPEL 194
Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
VL++ LDRE + H LVL A DGGDP SG I+++V+DANDNPP+F+Q YRVS+ E+
Sbjct: 195 VLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254
Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
VP GT +L V ATD DEG N++++Y + K +F L+ +G + + LD+E+
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVER 314
Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
Y I IEA+D L +R K++V V+D NDN+PEI ITSL+ + E+ G +AL D+
Sbjct: 315 YTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRDQ 374
Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
DSG+NG+V + +PFK+ S + YY+LVT +LDREQ EYN+++ A+D G PPLS+
Sbjct: 375 DSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLSS 434
Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
ITLH+ D+NDN P F +Y ++PENN GASI V+A DPD N R++Y+L
Sbjct: 435 SKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIAS 494
Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
L+ LSS+VS+++ +GV++A R+FD+EQ R +L + A D G+P LS+NVSL + V D
Sbjct: 495 DLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGD 554
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
+NDNAP +LYPAL DGS + PR+A+PGYLVTKVVAVD DSG NAWLSY +++ASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEP 614
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLFS+GL TGEVR RAL D+D+++Q L+VAV+D GQPPLSAT TL + AD + ++L D
Sbjct: 615 GLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 674
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
S P+ + +++ YLVVA+A +S +FL VI+ +ALRLR+ L S
Sbjct: 675 F-SDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVLCS 733
Query: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL----ISQESCEKSEP 790
G VG Y++ + D P+ N+ ++ +Q++ K
Sbjct: 734 KSGP--VGPPNYSEGTLPYAYNFCVPGDQMN-----PEFNFFTSVDHCPATQDNLNKDSM 786
Query: 791 LLITQDLLEMKGDSNLL-QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 849
LL + ++ D +L QQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ
Sbjct: 787 LLASILTPSVEADKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQ 846
Query: 850 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 909
AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG
Sbjct: 847 AMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAG 906
Query: 910 KRDGKAPAGGNGNKKKSGKKEKK 932
KRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 907 KRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 909 bits (2350), Expect = 0.0
Identities = 480/919 (52%), Positives = 619/919 (67%), Gaps = 13/919 (1%)
Query: 15 LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
L LL C QIRY + EE+ KGS VGN+A DLG +EL R +R+ S
Sbjct: 17 LFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPY 74
Query: 75 FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
F+++ +SG L+ + R+DREE+C + P C ++ + E+ L + V +EI+DIND+ P F
Sbjct: 75 FTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFT 134
Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
E++I E PGTRF ++ A D D+G+NSLQ YKLS N FSL + +G+KYPEL
Sbjct: 135 QNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPEL 194
Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
LE+ LDRE++ H+LVL A DGG P SG +++ V DANDNPP+F + YRVS+ EN
Sbjct: 195 ALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLREN 254
Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
VP GT +L V+ATD DEG N++++Y + +IF LNS SGE++ K LD+E+
Sbjct: 255 VPPGTTVLQVSATDQDEGINSEITYSFYRT----GQIFSLNSKSGEITTQKKLDFEETKE 310
Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
Y + +E +DG GL+++ + + + D NDN+PE+T SL + E G IALI +HD+
Sbjct: 311 YSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQ 370
Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
DSG+NG+V + G +PFK+ S Y+LVT +LDREQ EYN+++ A+D G PPLS+
Sbjct: 371 DSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSS 430
Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
+ LH+ D+NDN P F SY +PENNP GASI V A D D N +++Y++
Sbjct: 431 SISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMAS 490
Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
L+ L+S+VS+++ +GV++A R+FDYEQ R +L + A D G+P LS+NVSL + V D
Sbjct: 491 DLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGD 550
Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
+NDNAP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 551 RNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
GLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L D
Sbjct: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 670
Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
+ P ++L YLVVA+A +S +FL VI+ +ALRLRR GL
Sbjct: 671 ITD-RPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLCV 729
Query: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHL-IFPQPNYADTLISQESCEKSEPLLI 793
G +Y+ V+ T + + L Q + ++ +S PL
Sbjct: 730 KSGPVVPPNYSQGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCN 789
Query: 794 TQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 853
+ + S+ QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL
Sbjct: 790 SSE-----STSHPELQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL 844
Query: 854 ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG 913
ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG
Sbjct: 845 ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDG 904
Query: 914 KAPAGGNGNKKKSGKKEKK 932
KAPAGGNGNKKKSGKKEKK
Sbjct: 905 KAPAGGNGNKKKSGKKEKK 923
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 905 bits (2338), Expect = 0.0
Identities = 486/929 (52%), Positives = 623/929 (67%), Gaps = 12/929 (1%)
Query: 8 RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
R G L LL T S IRYS+ EEL KGS VGN+A DLGL +++ R +R+
Sbjct: 10 RAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVS 69
Query: 68 SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
+ FS++ +SG L+ RIDRE++C + C +++ +VE+ L IF V + I+D+N
Sbjct: 70 AEKLH--FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVN 127
Query: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
D+AP F +E+ ++I E GTR + A DPD+ INS+++YK++ N YFSL V S+
Sbjct: 128 DHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSD 187
Query: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
G KYPEL LE+ LDRE++ H L+L A DGGDP S HI++ V D NDNPP+F++ EY
Sbjct: 188 GGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEY 247
Query: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
R+S+ EN+P G+ +L V ATD DEG NA+++Y +F L+ +G + +S
Sbjct: 248 RISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSF 307
Query: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
D+ED Y +++EA+DG GL ++ K+++ +LD NDN+PEI ITSL+ + E G +A
Sbjct: 308 DFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVA 367
Query: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
L D D G NG+V + ++PFK+ S + YY+LVT +LDREQ EYN+++ A+D
Sbjct: 368 LFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDR 427
Query: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
G PPLS+ ITL+V DINDN P F SY ++ ENNP GASI V+A DPD N I
Sbjct: 428 GKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHI 487
Query: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
+Y++ L+ +SS+VS+++ +GV++A R+FD+EQ R L + A D G+P LS+NVS
Sbjct: 488 SYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVS 547
Query: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
L + V D+NDNAP +LYPAL DGS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY
Sbjct: 548 LRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYH 607
Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
+L+ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD
Sbjct: 608 VLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADN 667
Query: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
+ +IL DL S P ++L YLVVA+A +S +FL VI+ +ALRLRR
Sbjct: 668 LQEILPDL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDC 726
Query: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
GL G +Y+ ++ T + L P +++ C
Sbjct: 727 FHPGLCVKSGPVVPPNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSN---EDMVCSV 783
Query: 788 SEPLLIT----QDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 843
S LI +DL L QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF
Sbjct: 784 SPGALIPPHGGEDL--TSHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQF 841
Query: 844 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 903
DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT
Sbjct: 842 DTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNAT 901
Query: 904 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
LTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 LTNAAGKRDGKAPAGGNGNKKKSGKKEKK 930
>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
[Homo sapiens]
Length = 929
Score = 904 bits (2336), Expect = 0.0
Identities = 487/930 (52%), Positives = 637/930 (68%), Gaps = 19/930 (2%)
Query: 10 GRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSR 69
G+ L LL L + S IRY++ EELD+GS VGN+A DLG +L R +R+++
Sbjct: 12 GQRRMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAE 71
Query: 70 GRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDN 129
+ F+++P++G+L+ ++RIDREE+C + C+++ ++ E L F V + I+DINDN
Sbjct: 72 KK--FFTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDN 129
Query: 130 APNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGA 189
P F E++I EL + G F +++A DPDVG+NSLQ Y LSP+ +FSL +G+
Sbjct: 130 PPTFSQNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGS 189
Query: 190 KYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRV 249
+YPELVL+ LDRE++ H LVL A DGG+P S I+VIV DANDNPP+FTQ YRV
Sbjct: 190 RYPELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRV 249
Query: 250 SVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDY 309
+V EN+P G+ +L V A D DEG NA++ Y + ++ ++F L+S +GE++ + LD+
Sbjct: 250 NVAENLPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDF 309
Query: 310 EDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALI 369
E+ Y I +EA+DG + K+ + + D NDNAPEIT+ S + + E+ +G +ALI
Sbjct: 310 EERDSYTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALI 369
Query: 370 DVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGS 429
HD DSG NG++ + GN PFK+ + YRLVT +LDREQI EYN+++ A+D G+
Sbjct: 370 KTHDLDSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGN 429
Query: 430 PPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITY 489
PPLS+ ITLH++D+NDN P F SY+ ++ ENNP GASI V A DPD N ++Y
Sbjct: 430 PPLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSY 489
Query: 490 ALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLN 549
+ L+ LSS+VS+++ +GV++A R+FD+EQ R +L + A D G+P LS+NVSL
Sbjct: 490 YIVASDLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLR 549
Query: 550 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 609
+ V D+NDNAP +LYPAL +GS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY ++
Sbjct: 550 VLVDDRNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIV 609
Query: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIP 669
+ASEPGLFS+GL TGEVRTAR L DR+A +Q L+V V+D GQ PLSATV L + AD +
Sbjct: 610 QASEPGLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQ 669
Query: 670 DILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASG 729
+I DL S P+ ++L +LVVA+A +S +FL VI+ ++LRLR + A+
Sbjct: 670 EIQPDL-SDRPTPSDPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSR----PATE 724
Query: 730 GGLASTPGSHFVGADGVRAFLQTYS-----HEVSLTADSRKSHLIFPQPNY-ADTLISQE 783
G PG F GV L TYS + + A S S+ F N A+ Q+
Sbjct: 725 GYF--QPGVCFKTVPGV---LPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQD 779
Query: 784 SCEKSEPLLITQDLLEMKGDS-NLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 842
+ D EM +S NL +QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ
Sbjct: 780 LLCDEASWFESNDNPEMPSNSGNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQ 839
Query: 843 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 902
FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
Sbjct: 840 FDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA 899
Query: 903 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 900 TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 929
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 903 bits (2333), Expect = 0.0
Identities = 482/926 (52%), Positives = 628/926 (67%), Gaps = 29/926 (3%)
Query: 19 LLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQLFSLN 78
LL C S QIRY++ EEL GS VG +A DLGL REL R +R+ + F+++
Sbjct: 19 LLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---DYFNVS 75
Query: 79 PQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEEL 138
+SG L+ RIDRE++C + C ++ + E+ + +F V + I+DINDNAP F + +
Sbjct: 76 LESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVAKGI 135
Query: 139 EIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLER 198
+++I E +PG +F + +A D DV NSL+ Y ++PN YFSL+ +G+KYP L+LE+
Sbjct: 136 DLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLLLEK 195
Query: 199 ALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVG 258
LDRE + H+L+L A DGGDP SG HI + V DANDN P+F+Q YRVS+ ENVP G
Sbjct: 196 PLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENVPWG 255
Query: 259 TRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIK 318
T +L V ATD DEG NA+++Y P + +F+LN +G+++ +LD+E+ Y +
Sbjct: 256 TSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSRYVLS 314
Query: 319 IEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQ 378
+EA+DG + + + ++D NDNAPE+T S ++ +PE+ +G IALI V D+DSGQ
Sbjct: 315 VEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDSGQ 374
Query: 379 NGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHI 438
NG V + +PFKLE + YY+LV A +L+REQ ++YN+++ A+D G P LS+ T I
Sbjct: 375 NGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRTSI 434
Query: 439 TLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQG 498
TLH+ DINDN P F SY ++ ENNP GASI V+A DPD N R++Y++ L+
Sbjct: 435 TLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLEP 494
Query: 499 APLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDN 558
L S+VS++ +GV++A R+FD+EQ R +L + A D G+P LS+NVSL + V D NDN
Sbjct: 495 RELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDN 554
Query: 559 APEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFS 618
AP +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS
Sbjct: 555 APRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFS 614
Query: 619 VGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSL 678
+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD + ++L DL S
Sbjct: 615 LGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDL-SD 673
Query: 679 EPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR--------WHKSRLLQASGG 730
P ++L YLVVA+A +S +FL VI+ +ALRLRR ++ L SG
Sbjct: 674 RPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSGP 733
Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
G+ P +H G YS+ + + + S K+ F N + + +P
Sbjct: 734 GV---PPNHSEGT-------LPYSYNLCIASHSAKTE--FNSLNLTPEMAPPQDLLCDDP 781
Query: 791 LLI----TQDLLEMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 846
++ +D S QAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE
Sbjct: 782 SMVVCASNEDHKIAYDPSLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTE 841
Query: 847 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 906
MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN
Sbjct: 842 MLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTN 901
Query: 907 AAGKRDGKAPAGGNGNKKKSGKKEKK 932
AAGKRDGKAPAGGNGNKKKSGKKEKK
Sbjct: 902 AAGKRDGKAPAGGNGNKKKSGKKEKK 927
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,171,842
Number of Sequences: 37866
Number of extensions: 1645777
Number of successful extensions: 10107
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3094
Number of HSP's gapped (non-prelim): 662
length of query: 932
length of database: 18,247,518
effective HSP length: 112
effective length of query: 820
effective length of database: 14,006,526
effective search space: 11485351320
effective search space used: 11485351320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.