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Search of human proteins with 109689697
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109689697 transmembrane protein 80 isoform 1 [Homo sapiens]
(160 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109689697 transmembrane protein 80 isoform 1 [Homo sapiens] 313 4e-86
gi|109689699 transmembrane protein 80 isoform 2 [Homo sapiens] 306 6e-84
gi|115387120 transmembrane protein 216 [Homo sapiens] 63 1e-10
gi|217416409 transmembrane protein 17 [Homo sapiens] 55 3e-08
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 30 1.2
gi|153792393 G protein-coupled receptor 137C [Homo sapiens] 29 1.5
gi|41393187 NADPH oxidase activator 1 [Homo sapiens] 28 2.6
gi|205360983 potassium channel, subfamily K, member 16 isoform 3... 28 2.6
gi|205360973 potassium channel, subfamily K, member 16 isoform 4... 28 2.6
gi|205360971 potassium channel, subfamily K, member 16 isoform 1... 28 2.6
gi|14149764 potassium channel, subfamily K, member 16 isoform 2 ... 28 2.6
gi|23397648 phosphatidylinositol glycan anchor biosynthesis, cla... 28 2.6
gi|24308350 hypothetical protein LOC88745 [Homo sapiens] 28 4.4
gi|20302153 hyaluronan synthase 3 isoform a [Homo sapiens] 27 5.7
gi|38176296 LAG1 homolog, ceramide synthase 1 isoform 2 [Homo sa... 27 7.5
gi|11641421 LAG1 homolog, ceramide synthase 1 isoform 1 [Homo sa... 27 7.5
gi|206597549 coiled-coil domain containing 36 [Homo sapiens] 27 7.5
gi|206597547 coiled-coil domain containing 36 [Homo sapiens] 27 7.5
gi|4505401 NK2 transcription factor related, locus 2 [Homo sapiens] 27 7.5
gi|210031196 transmembrane protein with metallophosphoesterase d... 27 7.5
gi|157266292 intestinal alkaline phosphatase precursor [Homo sap... 27 7.5
gi|13128992 hypothetical protein MGC2803 [Homo sapiens] 27 9.8
gi|209862782 hypothetical protein LOC730130 [Homo sapiens] 27 9.8
gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens] 27 9.8
gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens] 27 9.8
gi|75677608 serine incorporator 4 [Homo sapiens] 27 9.8
>gi|109689697 transmembrane protein 80 isoform 1 [Homo sapiens]
Length = 160
Score = 313 bits (802), Expect = 4e-86
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MAEGARARGPRGCRDRDGPAGGAGRGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITY 60
MAEGARARGPRGCRDRDGPAGGAGRGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITY
Sbjct: 1 MAEGARARGPRGCRDRDGPAGGAGRGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITY 60
Query: 61 KSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSA 120
KSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSA
Sbjct: 61 KSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSA 120
Query: 121 HFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR 160
HFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR
Sbjct: 121 HFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR 160
>gi|109689699 transmembrane protein 80 isoform 2 [Homo sapiens]
Length = 168
Score = 306 bits (783), Expect = 6e-84
Identities = 160/168 (95%), Positives = 160/168 (95%), Gaps = 8/168 (4%)
Query: 1 MAEGARARGPRGCRDRDGPAGGAG--------RGSSTVLSSVPLQMLFYLSGTYYALYFL 52
MAEGARARGPRGCRDRDGPAGGAG RGSSTVLSSVPLQMLFYLSGTYYALYFL
Sbjct: 1 MAEGARARGPRGCRDRDGPAGGAGKMAAPRRGRGSSTVLSSVPLQMLFYLSGTYYALYFL 60
Query: 53 ATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALT 112
ATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALT
Sbjct: 61 ATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALT 120
Query: 113 AGTALLSAHFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR 160
AGTALLSAHFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR
Sbjct: 121 AGTALLSAHFLLWQALVLWADWALSATLLALHGLEAVLQVVAIAAFTR 168
>gi|115387120 transmembrane protein 216 [Homo sapiens]
Length = 87
Score = 62.8 bits (151), Expect = 1e-10
Identities = 33/82 (40%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 78 LLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADWALS 137
LL +GI E +RL+ GT+GNL + + PL+ S+ALT +A++++++LL Q VL + ++
Sbjct: 2 LLLYLGI-EVIRLFFGTKGNLCQRKMPLSISVALTFPSAMMASYYLLLQTYVLRLEAIMN 60
Query: 138 ATLLALHGLEAVLQVVAIAAFT 159
LL G E +L+V+ +AAF+
Sbjct: 61 GILLFFCGSELLLEVLTLAAFS 82
>gi|217416409 transmembrane protein 17 [Homo sapiens]
Length = 198
Score = 55.1 bits (131), Expect = 3e-08
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 15 DRDGPAGGAGRGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVL 74
+R GP G + V SS+ LQM Y + Y+ L+++++++M+ K + P Y +
Sbjct: 23 NRTGPESNEGPENEMV-SSLALQMSLYFNTYYFPLWWVSSIMMLHMKYSIL--PDYYKFI 79
Query: 75 DLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSAHFLLW 125
+ ++ L+ ++EA+RLYLG GNL E LA L+ L FLL+
Sbjct: 80 VITVIILITLIEAIRLYLGYVGNLQEKVPELAGFWLLSLLLQLPLILFLLF 130
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 29.6 bits (65), Expect = 1.2
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 8 RGPRGCRDRDGPAGGAGRGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSY 67
RGP G R R GP G G P+Q+ G + + + + + + +SY
Sbjct: 1603 RGPPGPRGRPGPPGPPGG---------PIQLQQDDLGAAFQTWMDTSGAL---RPESYSY 1650
Query: 68 PHRYLVLD------LALLFLMGILEAVRLYLGTRGNLTEAERPL 105
P R LVLD L +L ++++++ LGT+ N R L
Sbjct: 1651 PDR-LVLDQGGEIFKTLHYLSNLIQSIKTPLGTKENPARVCRDL 1693
>gi|153792393 G protein-coupled receptor 137C [Homo sapiens]
Length = 429
Score = 29.3 bits (64), Expect = 1.5
Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 5 ARARGPRGCRDRDGPAGGAGRGSSTVLSS---VPLQMLFYLSGTYYALYFLATLLMITYK 61
A A P R+ P GG+G G + +S VP + LS + LY A L Y
Sbjct: 9 AAAAAPAAGREPSTPGGGSGGGGAVAAASGAAVPGSVQLALSVLHALLY--AALFAFAYL 66
Query: 62 S--QVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLS 119
++ Y R L LFL L+ R L A L+ SL L A L
Sbjct: 67 QLWRLLLYRERRLSYQSLCLFL------CLLWAALRTTLFSAAFSLSGSLPLLRPPAHLH 120
Query: 120 --AHFLLW 125
H+LL+
Sbjct: 121 FFPHWLLY 128
>gi|41393187 NADPH oxidase activator 1 [Homo sapiens]
Length = 483
Score = 28.5 bits (62), Expect = 2.6
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 9 GPRGCRDRDGPAGGAGRGSSTVLSSVPLQMLF 40
GP C D G AGGAG G S L +V +Q F
Sbjct: 292 GPGPCEDPAG-AGGAGAGGSEPLVTVTVQCAF 322
>gi|205360983 potassium channel, subfamily K, member 16 isoform 3
[Homo sapiens]
Length = 294
Score = 28.5 bits (62), Expect = 2.6
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 25 RGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGI 84
+G+ST S+ F+ +GT L T QVF + L + L ++FL +
Sbjct: 84 KGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHL 143
Query: 85 LEAVRLYLGT------RGNLTEAERPLAASLALTAGTALL 118
+R +L R ++ + L +L LT GT ++
Sbjct: 144 GTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVI 183
>gi|205360973 potassium channel, subfamily K, member 16 isoform 4
[Homo sapiens]
Length = 262
Score = 28.5 bits (62), Expect = 2.6
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 25 RGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGI 84
+G+ST S+ F+ +GT L T QVF + L + L ++FL +
Sbjct: 84 KGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHL 143
Query: 85 LEAVRLYLGT------RGNLTEAERPLAASLALTAGTALL 118
+R +L R ++ + L +L LT GT ++
Sbjct: 144 GTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVI 183
>gi|205360971 potassium channel, subfamily K, member 16 isoform 1
[Homo sapiens]
Length = 322
Score = 28.5 bits (62), Expect = 2.6
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 25 RGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGI 84
+G+ST S+ F+ +GT L T QVF + L + L ++FL +
Sbjct: 84 KGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHL 143
Query: 85 LEAVRLYLGT------RGNLTEAERPLAASLALTAGTALL 118
+R +L R ++ + L +L LT GT ++
Sbjct: 144 GTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVI 183
>gi|14149764 potassium channel, subfamily K, member 16 isoform 2
[Homo sapiens]
Length = 309
Score = 28.5 bits (62), Expect = 2.6
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 25 RGSSTVLSSVPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGI 84
+G+ST S+ F+ +GT L T QVF + L + L ++FL +
Sbjct: 84 KGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALLGIPLNVIFLNHL 143
Query: 85 LEAVRLYLGT------RGNLTEAERPLAASLALTAGTALL 118
+R +L R ++ + L +L LT GT ++
Sbjct: 144 GTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGTLVI 183
>gi|23397648 phosphatidylinositol glycan anchor biosynthesis, class
O isoform 1 [Homo sapiens]
Length = 1089
Score = 28.5 bits (62), Expect = 2.6
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 81 LMGILEAVRLYLGTRGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADWALSATL 140
L+ +L AVRL+L GNL E P+ L + G L++ + AL AD A
Sbjct: 677 LVALLAAVRLWLRRYGNLKSPEPPM---LFVRWGLPLMALGTAAYWALASGADEAPPRLR 733
Query: 141 LALHGLEAVL 150
+ + G VL
Sbjct: 734 VLVSGASMVL 743
>gi|24308350 hypothetical protein LOC88745 [Homo sapiens]
Length = 259
Score = 27.7 bits (60), Expect = 4.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 4 GARARGPRGCRDRDGPAGG 22
GA AR PRG RDR+ GG
Sbjct: 13 GAGARRPRGARDREEDGGG 31
>gi|20302153 hyaluronan synthase 3 isoform a [Homo sapiens]
Length = 553
Score = 27.3 bits (59), Expect = 5.7
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 40 FYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYLGTRGNLT 99
++ Y +L+F L +TY+S V + +L+ + LF G + + L+L T +
Sbjct: 361 YFREWLYNSLWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRIWNILLFLLTVQLVG 420
Query: 100 EAERPLAASLALTAGTALLSAHFLLWQALVLWADWALSATL 140
+ A L A +S + LL+ + +L A AT+
Sbjct: 421 IIKATYACFLRGNAEMIFMSLYSLLYMSSLLPAKIFAIATI 461
>gi|38176296 LAG1 homolog, ceramide synthase 1 isoform 2 [Homo
sapiens]
Length = 337
Score = 26.9 bits (58), Expect = 7.5
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 21/91 (23%)
Query: 40 FYLSGTYYALYFLATLLMITYKSQ---------------VFSYPHRYLVLDLALLFLMGI 84
+ L G++Y ATL M T++ V SY RY + + +LFL I
Sbjct: 152 YLLQGSFYGHSIYATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLHDI 211
Query: 85 LEA------VRLYLGTRGNLTEAERPLAASL 109
+ + +Y +RG LAA L
Sbjct: 212 SDVQLEFTKLNIYFKSRGGSYHRLHALAADL 242
>gi|11641421 LAG1 homolog, ceramide synthase 1 isoform 1 [Homo
sapiens]
Length = 350
Score = 26.9 bits (58), Expect = 7.5
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 21/91 (23%)
Query: 40 FYLSGTYYALYFLATLLMITYKSQ---------------VFSYPHRYLVLDLALLFLMGI 84
+ L G++Y ATL M T++ V SY RY + + +LFL I
Sbjct: 152 YLLQGSFYGHSIYATLYMDTWRKDSVVMLLHHVVTLILIVSSYAFRYHNVGILVLFLHDI 211
Query: 85 LEA------VRLYLGTRGNLTEAERPLAASL 109
+ + +Y +RG LAA L
Sbjct: 212 SDVQLEFTKLNIYFKSRGGSYHRLHALAADL 242
>gi|206597549 coiled-coil domain containing 36 [Homo sapiens]
Length = 594
Score = 26.9 bits (58), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 95 RGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADW 134
+ + ++ PLA SL LT S +LWQA L A W
Sbjct: 267 KDSASQTSPPLAQSLNLTRQEKYTSEKPVLWQAQALPAAW 306
>gi|206597547 coiled-coil domain containing 36 [Homo sapiens]
Length = 594
Score = 26.9 bits (58), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 95 RGNLTEAERPLAASLALTAGTALLSAHFLLWQALVLWADW 134
+ + ++ PLA SL LT S +LWQA L A W
Sbjct: 267 KDSASQTSPPLAQSLNLTRQEKYTSEKPVLWQAQALPAAW 306
>gi|4505401 NK2 transcription factor related, locus 2 [Homo
sapiens]
Length = 273
Score = 26.9 bits (58), Expect = 7.5
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 7/44 (15%)
Query: 3 EGARARGPRGCRDRDGP-----AGGAGRGSSTVLSSVPLQMLFY 41
EG+ A GP + +GP AG G+G+ + S+PL+ FY
Sbjct: 25 EGSVAEGPE--EENEGPEPAKRAGPLGQGALDAVQSLPLKNPFY 66
>gi|210031196 transmembrane protein with metallophosphoesterase
domain isoform 1 [Homo sapiens]
Length = 453
Score = 26.9 bits (58), Expect = 7.5
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 34 VPLQMLFYLSGTYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYLG 93
V L L +++ ++FL + +S Y+++ L L G+ +A +L
Sbjct: 88 VVLAFLALAHSSFFTMFFLVAEEPYLFSLAAYSCLGAYIIMLFFLFILSGMEQAYQLLAW 147
Query: 94 TRGNLT---EAERPLAASLALTAG-TALLSAHFLL 124
G + E R L AL G TA+LS +L
Sbjct: 148 RSGRVVGSLEKTRKLVLRPALAVGVTAVLSVAGIL 182
>gi|157266292 intestinal alkaline phosphatase precursor [Homo
sapiens]
Length = 528
Score = 26.9 bits (58), Expect = 7.5
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 99 TEAERPLAASLALTAGTALL 118
T+A P+AASL L AGT LL
Sbjct: 502 TDAAHPVAASLPLLAGTLLL 521
>gi|13128992 hypothetical protein MGC2803 [Homo sapiens]
Length = 176
Score = 26.6 bits (57), Expect = 9.8
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 1 MAEGARARGPRGCRDRDGPAGGAGRGS 27
MA R P+G R+ GPAGG G GS
Sbjct: 1 MAARGRRAEPQG-REAPGPAGGGGGGS 26
>gi|209862782 hypothetical protein LOC730130 [Homo sapiens]
Length = 380
Score = 26.6 bits (57), Expect = 9.8
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 2 AEGARARGPRGCRDRDGPAGGAGRGSSTVLSSVPLQMLFYLSGTYYALYF 51
A GAR R PRG R GAG S L +P + F + G ++F
Sbjct: 216 AAGARRRRPRGPR-------GAGGAPSQGLPDLPRFLFFGMHGFLDEIFF 258
>gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens]
Length = 444
Score = 26.6 bits (57), Expect = 9.8
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 34 VPLQMLFYLSG-TYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYL 92
V L +L +L+G T Y LY ++ + Y S +F P+ ++ LL+++GI + V Y+
Sbjct: 216 VILWILAFLAGNTLYVLYTFSSQQL--YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYI 273
>gi|158186612 transmembrane protein 118 isoform 2 [Homo sapiens]
Length = 420
Score = 26.6 bits (57), Expect = 9.8
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 34 VPLQMLFYLSG-TYYALYFLATLLMITYKSQVFSYPHRYLVLDLALLFLMGILEAVRLYL 92
V L +L +L+G T Y LY ++ + Y S +F P+ ++ LL+++GI + V Y+
Sbjct: 216 VILWILAFLAGNTLYVLYTFSSQQL--YNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYI 273
>gi|75677608 serine incorporator 4 [Homo sapiens]
Length = 274
Score = 26.6 bits (57), Expect = 9.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 18 GPAGGAGRGSSTVLSSVP---LQMLFYLSGTYYALYFLATLLMITYKSQVFSY 67
G GGA R + P +Q L Y ++ ++FLA+L ++ + FSY
Sbjct: 153 GQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLASLYVMVTLTNWFSY 205
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,333,523
Number of Sequences: 37866
Number of extensions: 195457
Number of successful extensions: 1434
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1420
Number of HSP's gapped (non-prelim): 32
length of query: 160
length of database: 18,247,518
effective HSP length: 94
effective length of query: 66
effective length of database: 14,688,114
effective search space: 969415524
effective search space used: 969415524
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.