Search of human proteins with 109638743

Search of human proteins with 109638743

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109638743 hypothetical protein LOC83723 [Homo sapiens]
         (274 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109638743 hypothetical protein LOC83723 [Homo sapiens]             574   e-164
gi|13376162 family with sequence similarity 57, member A [Homo s...   254   7e-68
gi|31083053 ceroid-lipofuscinosis, neuronal 8 [Homo sapiens]           38   0.008
gi|239752881 PREDICTED: hypothetical protein [Homo sapiens]            29   3.9  
gi|239747434 PREDICTED: hypothetical protein [Homo sapiens]            29   3.9  
gi|239741258 PREDICTED: hypothetical protein XP_002342146 [Homo ...    29   3.9  
gi|58197554 transmembrane protein 201 isoform 2 [Homo sapiens]         29   3.9  
gi|195963431 transmembrane protein 201 isoform 1 [Homo sapiens]        29   3.9  
gi|237874289 TLC domain containing 1 isoform 2 [Homo sapiens]          29   5.1  
gi|19923999 TLC domain containing 1 isoform 1 [Homo sapiens]           29   5.1  
gi|157388941 hypothetical protein LOC55071 [Homo sapiens]              29   5.1  
gi|90903231 huntingtin [Homo sapiens]                                  28   6.6  
gi|148746181 testis enhanced gene transcript (BAX inhibitor 1) i...    28   6.6  
gi|148746209 testis enhanced gene transcript (BAX inhibitor 1) i...    28   6.6  
gi|4507005 solute carrier family 22 member 5 [Homo sapiens]            28   6.6  
gi|85797660 limkain b1 [Homo sapiens]                                  28   6.6  

>gi|109638743 hypothetical protein LOC83723 [Homo sapiens]
          Length = 274

 Score =  574 bits (1480), Expect = e-164
 Identities = 274/274 (100%), Positives = 274/274 (100%)

Query: 1   MLTPMVAGGVVFPGLFLLSKNTLQRLPQLRWEEADAVIVSARLVSSVQAIMASTAGYIVS 60
           MLTPMVAGGVVFPGLFLLSKNTLQRLPQLRWEEADAVIVSARLVSSVQAIMASTAGYIVS
Sbjct: 1   MLTPMVAGGVVFPGLFLLSKNTLQRLPQLRWEEADAVIVSARLVSSVQAIMASTAGYIVS 60

Query: 61  TSCKHIIDDQHWLSSAYTQFAVPYFIYDIYAMFLCHWHKHQVKGHGGDDGAARAPGSTWA 120
           TSCKHIIDDQHWLSSAYTQFAVPYFIYDIYAMFLCHWHKHQVKGHGGDDGAARAPGSTWA
Sbjct: 61  TSCKHIIDDQHWLSSAYTQFAVPYFIYDIYAMFLCHWHKHQVKGHGGDDGAARAPGSTWA 120

Query: 121 IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQ 180
           IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQ
Sbjct: 121 IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQ 180

Query: 181 YKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAAL 240
           YKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAAL
Sbjct: 181 YKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAAL 240

Query: 241 LLAPQLYWFFLICRGACRLFWPRSRPPPACQAQD 274
           LLAPQLYWFFLICRGACRLFWPRSRPPPACQAQD
Sbjct: 241 LLAPQLYWFFLICRGACRLFWPRSRPPPACQAQD 274


>gi|13376162 family with sequence similarity 57, member A [Homo
           sapiens]
          Length = 257

 Score =  254 bits (648), Expect = 7e-68
 Identities = 126/260 (48%), Positives = 169/260 (65%), Gaps = 12/260 (4%)

Query: 1   MLTPMVAGGVVFPGLFLLSKNTLQRLPQLRWEEADAVIVSARLVSSVQAIMASTAGYIVS 60
           ML  +  G + FPGLF L    L+R  Q  W   D V++S RLVSSV A++A+ +G ++ 
Sbjct: 1   MLLTLAGGALFFPGLFALCTWALRR-SQPGWSRTDCVMISTRLVSSVHAVLATGSGIVII 59

Query: 61  TSCKHIIDDQHWLSSAYTQFAVPYFIYDIYAMFLCHWHKHQVKGHGGDDGAARAPGSTWA 120
            SC  +I  +HWL+  Y  F +PY IYD YAM+LC W + + +         RAP  T  
Sbjct: 60  RSCDDVITGRHWLAREYVWFLIPYMIYDSYAMYLCEWCRTRDQN--------RAPSLT-- 109

Query: 121 IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQ 180
             R +L +  LM+ HHA ++ V  P++   R   GDFF+GC+  AE+STPFV LG++LIQ
Sbjct: 110 -LRNFLSRNRLMITHHAVILFVLVPVAQRLRGDLGDFFVGCIFTAELSTPFVSLGRVLIQ 168

Query: 181 YKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAAL 240
            KQQHTLL+KVNG L L +FL CR+LLFP++YW+YGR  GL LL VP +IP + N+  A 
Sbjct: 169 LKQQHTLLYKVNGILTLATFLSCRILLFPFMYWSYGRQQGLSLLQVPFSIPFYCNVANAF 228

Query: 241 LLAPQLYWFFLICRGACRLF 260
           L+APQ+YWF L+CR A RLF
Sbjct: 229 LVAPQIYWFCLLCRKAVRLF 248


>gi|31083053 ceroid-lipofuscinosis, neuronal 8 [Homo sapiens]
          Length = 286

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 129 EFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQYKQQHTLL 188
           +  +V+HH    L    L  +     G +     L+ E+STPF C+  +L++     +L 
Sbjct: 132 DLFLVIHHLFAFLGF--LGCLVNLQAGHYLAMTTLLLEMSTPFTCVSWMLLKAGWSESLF 189

Query: 189 HKVNGALMLLSFLCCRVLLFPYLYW 213
            K+N  LM+  F  CR++L  +++W
Sbjct: 190 WKLNQWLMIHMF-HCRMVLTYHMWW 213


>gi|239752881 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 254

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 99  KHQVKGHGGDDGAARAPGSTWAIARGYLHKEFLMVLH---HAAMVLVC 143
           +H V+ HGGD+ A   PG +       L  +    LH   H    L+C
Sbjct: 90  RHSVRTHGGDERAVEGPGDSKVTVGNILSLQDASELHRLAHRVQPLLC 137


>gi|239747434 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 254

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 99  KHQVKGHGGDDGAARAPGSTWAIARGYLHKEFLMVLH---HAAMVLVC 143
           +H V+ HGGD+ A   PG +       L  +    LH   H    L+C
Sbjct: 90  RHSVRTHGGDERAVEGPGDSKVTVGNILSLQDASELHRLAHRVQPLLC 137


>gi|239741258 PREDICTED: hypothetical protein XP_002342146 [Homo
           sapiens]
          Length = 254

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 99  KHQVKGHGGDDGAARAPGSTWAIARGYLHKEFLMVLH---HAAMVLVC 143
           +H V+ HGGD+ A   PG +       L  +    LH   H    L+C
Sbjct: 90  RHSVRTHGGDERAVEGPGDSKVTVGNILSLQDASELHRLAHRVQPLLC 137


>gi|58197554 transmembrane protein 201 isoform 2 [Homo sapiens]
          Length = 392

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 195 LMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIP 231
           L  L+FL C  LL   LY A G  A  P   VPLA+P
Sbjct: 217 LRALAFLACAFLLTTALYGASGHFA--PGTTVPLALP 251


>gi|195963431 transmembrane protein 201 isoform 1 [Homo sapiens]
          Length = 642

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 195 LMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIP 231
           L  L+FL C  LL   LY A G  A  P   VPLA+P
Sbjct: 217 LRALAFLACAFLLTTALYGASGHFA--PGTTVPLALP 251


>gi|237874289 TLC domain containing 1 isoform 2 [Homo sapiens]
          Length = 200

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 10/130 (7%)

Query: 121 IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQ 180
           +A G     +  ++HH  M +  F   + W    G   L   L+ EVS  F+ +  ++  
Sbjct: 56  VASGQTRASWEYLVHHV-MAMGAFFSGIFWSSFVGGGVL--TLLVEVSNIFLTIRMMMKI 112

Query: 181 YKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAAL 240
              Q  LL++VN  + L+ +   R+    YL   + R+     L   L       LG  L
Sbjct: 113 SNAQDHLLYRVNKYVNLVMYFLFRLAPQAYLTHFFLRYVNQRTLGTFL-------LGILL 165

Query: 241 LLAPQLYWFF 250
           +L   +  +F
Sbjct: 166 MLDVMIIIYF 175


>gi|19923999 TLC domain containing 1 isoform 1 [Homo sapiens]
          Length = 247

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 10/130 (7%)

Query: 121 IARGYLHKEFLMVLHHAAMVLVCFPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQ 180
           +A G     +  ++HH  M +  F   + W    G   L   L+ EVS  F+ +  ++  
Sbjct: 103 VASGQTRASWEYLVHHV-MAMGAFFSGIFWSSFVGGGVL--TLLVEVSNIFLTIRMMMKI 159

Query: 181 YKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAAL 240
              Q  LL++VN  + L+ +   R+    YL   + R+     L   L       LG  L
Sbjct: 160 SNAQDHLLYRVNKYVNLVMYFLFRLAPQAYLTHFFLRYVNQRTLGTFL-------LGILL 212

Query: 241 LLAPQLYWFF 250
           +L   +  +F
Sbjct: 213 MLDVMIIIYF 222


>gi|157388941 hypothetical protein LOC55071 [Homo sapiens]
          Length = 194

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 101 QVKGHGGDDGAARA--PGSTWAIARGYLHKEF 130
           ++ G GGDDGA RA  P   W +A    ++EF
Sbjct: 116 RLPGGGGDDGAGRAGPPRGDWGVASRQHNEEF 147


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 198  LSFLCCRVLL-----FPYLYWAYGRHAGLPLLAVPLAIPAHVNLGAALLLAPQL--YWF 249
            L+F CC  L      FP   W+ G H G+P L+          +G A ++   L   WF
Sbjct: 1023 LTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWF 1081


>gi|148746181 testis enhanced gene transcript (BAX inhibitor 1)
           isoform 2 [Homo sapiens]
          Length = 295

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 138 AMVLVCFPLSVVWRQGKGDFFLGCMLMAEVS 168
           AM+  CF LS ++ + +   FLG +LM+ +S
Sbjct: 180 AMIFTCFTLSALYARRRSYLFLGGILMSALS 210


>gi|148746209 testis enhanced gene transcript (BAX inhibitor 1)
           isoform 1 [Homo sapiens]
          Length = 237

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)

Query: 138 AMVLVCFPLSVVWRQGKGDFFLGCMLMAEVS 168
           AM+  CF LS ++ + +   FLG +LM+ +S
Sbjct: 122 AMIFTCFTLSALYARRRSYLFLGGILMSALS 152


>gi|4507005 solute carrier family 22 member 5 [Homo sapiens]
          Length = 557

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 144 FPLSVVWRQGKGDFFLGCMLMAEVSTPFVCLGKILIQY 181
           F LS+      GD F+ C L A V  P   L  +L+QY
Sbjct: 359 FGLSLDTPNLHGDIFVNCFLSAMVEVPAYVLAWLLLQY 396


>gi|85797660 limkain b1 [Homo sapiens]
          Length = 1742

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 15/99 (15%)

Query: 170  PFVCLGKILIQYKQQHTLLHKVNGALMLLSFLCCRVLLFPYLYWAYGRHAGLPLLAVPLA 229
            PFV L  +     Q H+LL    G + LLSF  C +  F  L        G+PL      
Sbjct: 998  PFVILS-LKTFAPQVHSLLQTHEGTVPLLSFPDCYIAEFGDLEVVQENQGGVPLEHFITC 1056

Query: 230  IPAHVNLGAALLLAPQLYWFFLICRGACRLFWPRSRPPP 268
            +P  VN+  A               G   + W  ++PPP
Sbjct: 1057 VPG-VNIATAQ-------------NGIKVVKWIHNKPPP 1081


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.142    0.479 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,041,486
Number of Sequences: 37866
Number of extensions: 459886
Number of successful extensions: 1251
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1240
Number of HSP's gapped (non-prelim): 16
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.