Guide to the Human Genome
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Name: TMBIM6 Sequence: fasta or formatted (237aa) NCBI GI: 148746209
Description:

testis enhanced gene transcript (BAX inhibitor 1) isoform 1

Referenced in:

Testes and Sperm

Other entries for this name:
alt prot [295aa] testis enhanced gene transcript (BAX inhibitor 1) isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         22           3
 C cysteine            2.1          5           1
 D aspartate           3.4          8           1
 E glutamate           3.0          7           1
 F phenylalanine       8.9         21           2
 G glycine             6.8         16           2
 H histidine           3.4          8           1
 I isoleucine          7.2         17           2
 K lysine              5.5         13           3
 L leucine            15.6         37           4
 M methionine          5.1         12           2
 N asparagine          2.5          6           1
 P proline             2.1          5           1
 Q glutamine           3.0          7           2
 R arginine            2.5          6           3
 S serine              5.9         14           2
 T threonine           5.1         12           1
 V valine              5.1         12           2
 W tryptophan          1.3          3           1
 Y tyrosine            2.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis enhanced gene transcript (BAX inhibitor 1) i... 
TMBIM6                1.000   testis enhanced gene transcript (BAX inhibitor 1) i...
TMBIM4                0.089   transmembrane BAX inhibitor motif containing 4 [Hom...
GHITM                 0.062   growth hormone inducible transmembrane protein [Hom...
TMBIM1                0.029   transmembrane BAX inhibitor motif containing 1 [Homo...
FAIM2                 0.025   Fas apoptotic inhibitory molecule 2 
FAM57B                0.007   hypothetical protein LOC83723 
RNF139                0.007   ring finger protein 139 
SLC35B3               0.007   solute carrier family 35, member B3 
SLC35B3               0.007   solute carrier family 35, member B3 
SLC35B3               0.007   solute carrier family 35, member B3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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