Search of human proteins with 109627654

Search of human proteins with 109627654

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109627654 short long palate, lung and nasal epithelium
carcinoma associated 3 isoform 1 [Homo sapiens]
         (254 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109627654 short long palate, lung and nasal epithelium carcin...   518   e-147
gi|109627656 short long palate, lung and nasal epithelium carcin...   424   e-119
gi|7706119 palate, lung and nasal epithelium associated precurso...    67   1e-11
gi|18765705 palate, lung and nasal epithelium associated precurs...    67   1e-11
gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]         45   5e-05
gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]                34   0.11 
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]    29   3.5  
gi|28372551 bactericidal/permeability-increasing protein-like 2 ...    29   4.5  
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi...    29   4.5  
gi|7657069 ERO1-like [Homo sapiens]                                    29   4.5  
gi|239755945 PREDICTED: hypothetical protein [Homo sapiens]            28   5.9  
gi|239750458 PREDICTED: hypothetical protein [Homo sapiens]            28   5.9  
gi|40807482 LPLUNC1 protein precursor [Homo sapiens]                   28   5.9  
gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]              28   7.7  
gi|46359075 zinc finger protein 423 [Homo sapiens]                     28   7.7  

>gi|109627654 short long palate, lung and nasal epithelium carcinoma
           associated 3 isoform 1 [Homo sapiens]
          Length = 254

 Score =  518 bits (1334), Expect = e-147
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNI 60
           MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNI
Sbjct: 1   MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNI 60

Query: 61  HFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQLDCGGIQISFHKEWFSANIS 120
           HFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQLDCGGIQISFHKEWFSANIS
Sbjct: 61  HFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQLDCGGIQISFHKEWFSANIS 120

Query: 121 LEFDLELRPSFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEA 180
           LEFDLELRPSFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEA
Sbjct: 121 LEFDLELRPSFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEA 180

Query: 181 IPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHE 240
           IPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHE
Sbjct: 181 IPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHE 240

Query: 241 TSQPSACQAGESPS 254
           TSQPSACQAGESPS
Sbjct: 241 TSQPSACQAGESPS 254


>gi|109627656 short long palate, lung and nasal epithelium carcinoma
           associated 3 isoform 2 [Homo sapiens]
          Length = 218

 Score =  424 bits (1091), Expect = e-119
 Identities = 217/254 (85%), Positives = 217/254 (85%), Gaps = 36/254 (14%)

Query: 1   MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNI 60
           MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNI
Sbjct: 1   MMCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNI 60

Query: 61  HFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQLDCGGIQISFHKEWFSANIS 120
           HFGDRLNASAQVAPGLVGWLISGRKHQQQQES                            
Sbjct: 61  HFGDRLNASAQVAPGLVGWLISGRKHQQQQESR--------------------------- 93

Query: 121 LEFDLELRPSFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEA 180
                    SFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEA
Sbjct: 94  ---------SFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEA 144

Query: 181 IPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHE 240
           IPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHE
Sbjct: 145 IPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHE 204

Query: 241 TSQPSACQAGESPS 254
           TSQPSACQAGESPS
Sbjct: 205 TSQPSACQAGESPS 218


>gi|7706119 palate, lung and nasal epithelium associated precursor
           [Homo sapiens]
          Length = 256

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 22/240 (9%)

Query: 8   LLIFLGLLALPLA-------PHKQPWP-----GLAQAHRDNKSTLARIIAQGLIKHNAES 55
           L++F GLLA  +A       P  Q  P      L  +      +L   ++ GL+      
Sbjct: 7   LIVFYGLLAQTMAQFGGLPVPLDQTLPLNVNPALPLSPTGLAGSLTNALSNGLLSGGLLG 66

Query: 56  RIQNIHFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQ------LDCGGIQI- 108
            ++N+   D L      + GL+G L+   K         NI +I+      L+ G +Q  
Sbjct: 67  ILENLPLLDILKPGGGTSGGLLGGLLG--KVTSVIPGLNNIIDIKVTDPQLLELGLVQSP 124

Query: 109 SFHKEWFSANISLEFDLELRPSFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAE 168
             H+ + +  + ++  +   P    +++++   + I  E    +D+  R  LV+G C   
Sbjct: 125 DGHRLYVTIPLGIKLQVNT-PLVGASLLRLAVKLDITAEILAVRDKQERIHLVLGDCTHS 183

Query: 169 PSSVHVAILTEAIPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLI 228
           P S+ +++L    P  +   L +L   L KVLP +V+  VCPL+ E+L  LD+ L+  ++
Sbjct: 184 PGSLQISLLDGLGPLPIQGLLDSLTGILNKVLPELVQGNVCPLVNEVLRGLDITLVHDIV 243


>gi|18765705 palate, lung and nasal epithelium associated precursor
           [Homo sapiens]
          Length = 256

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 22/240 (9%)

Query: 8   LLIFLGLLALPLA-------PHKQPWP-----GLAQAHRDNKSTLARIIAQGLIKHNAES 55
           L++F GLLA  +A       P  Q  P      L  +      +L   ++ GL+      
Sbjct: 7   LIVFYGLLAQTMAQFGGLPVPLDQTLPLNVNPALPLSPTGLAGSLTNALSNGLLSGGLLG 66

Query: 56  RIQNIHFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQ------LDCGGIQI- 108
            ++N+   D L      + GL+G L+   K         NI +I+      L+ G +Q  
Sbjct: 67  ILENLPLLDILKPGGGTSGGLLGGLLG--KVTSVIPGLNNIIDIKVTDPQLLELGLVQSP 124

Query: 109 SFHKEWFSANISLEFDLELRPSFDNNIVKMCAHMSIVVEFWLEKDEFGRRDLVIGKCDAE 168
             H+ + +  + ++  +   P    +++++   + I  E    +D+  R  LV+G C   
Sbjct: 125 DGHRLYVTIPLGIKLQVNT-PLVGASLLRLAVKLDITAEILAVRDKQERIHLVLGDCTHS 183

Query: 169 PSSVHVAILTEAIPPKMNQFLYNLKENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLI 228
           P S+ +++L    P  +   L +L   L KVLP +V+  VCPL+ E+L  LD+ L+  ++
Sbjct: 184 PGSLQISLLDGLGPLPIQGLLDSLTGILNKVLPELVQGNVCPLVNEVLRGLDITLVHDIV 243


>gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]
          Length = 249

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 49/258 (18%), Positives = 110/258 (42%), Gaps = 51/258 (19%)

Query: 2   MCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGL--IKHNAESRIQN 59
           M  LW+L++  G+L            G +++  DN       +   L  + H     + N
Sbjct: 1   MLQLWKLVLLCGVLT-----------GTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDN 49

Query: 60  IHFG--DRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQL----DCGGIQISFHKE 113
              G  ++L     V      W ++ +K Q+ ++   N+ +  L    D  G++IS    
Sbjct: 50  TLKGILEKLKVDLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISN--- 106

Query: 114 WFSANISLEFDLELRPSFDNN---------------------IVKMCAHMSIVVEFWLEK 152
                 SL  D++  P  D                       I+ + A + ++    +E 
Sbjct: 107 ------SLILDVKAEPIDDGKGLNLSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIET 160

Query: 153 DEFGRRDL-VIGKCDAEPSSVHVAILTEAIPPKMNQFLYNLKENLQKVLPHMVESQVCPL 211
           D    + + V+G+C ++P+S+ +++L +     +N+F+ ++   L+  +  +++ ++CPL
Sbjct: 161 DPQTHQPVAVLGECASDPTSISLSLLDKH-SQIINKFVNSVINTLKSTVSSLLQKEICPL 219

Query: 212 IGEILGQLDVKLLKSLIE 229
           I   +  LDV +++ +++
Sbjct: 220 IRIFIHSLDVNVIQQVVD 237


>gi|223278377 antimicrobial peptide RY2G5 [Homo sapiens]
          Length = 614

 Score = 34.3 bits (77), Expect = 0.11
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 138 MCAHMSIVVEFWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEAIPPKMNQFLYNLKENL- 196
           +   ++I  +  L  D  G   LVI +CD     + V +L   +P        NL +NL 
Sbjct: 268 IAVEVNITAKVRLTMDRTGYPRLVIERCDTLLGGIKVKLLRGLLP--------NLVDNLV 319

Query: 197 QKVLPHMVESQVCPLIGEILGQLDVKL 223
            +VL  ++   +CP++  +LG ++ +L
Sbjct: 320 NRVLADVLPDLLCPIVDVVLGLVNDQL 346


>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
          Length = 719

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 2/123 (1%)

Query: 21  PHKQPWPGLAQAHRDNKSTL--ARIIAQGLIKHNAESRIQNIHFGDRLNASAQVAPGLVG 78
           P K P    ++   D+  TL  A  IA+     N E+  ++ +    +    ++ P    
Sbjct: 572 PQKDPTADPSEPSADSYLTLSTAPTIAKAPFYVNGEAAERSSYENKEVEGELEMGPAGSS 631

Query: 79  WLISGRKHQQQQESSINITNIQLDCGGIQISFHKEWFSANISLEFDLELRPSFDNNIVKM 138
           W    R+H+ ++  S+ + N   + GG             +S     E  P  +  +   
Sbjct: 632 WCPDSREHRPRKHLSLRLCNRDPEPGGATEKMKTHQLENGLSRSVSQETEPEREAGLQNT 691

Query: 139 CAH 141
             H
Sbjct: 692 HTH 694


>gi|28372551 bactericidal/permeability-increasing protein-like 2
           [Homo sapiens]
          Length = 507

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 150 LEKDEFGRRDLVIGKCDAEPSSVHVAILTEAIPPKMNQFLYN-LKENLQKVLPHMVESQV 208
           L +++FG   L +  C A+ S  HV+   E         LYN   E ++K +   +   +
Sbjct: 146 LTRNDFGHPTLKLQDCYAQLSHAHVSFSGEL------SVLYNSFAEPMEKPILKNLNEML 199

Query: 209 CPLIGEILGQLDVKL 223
           CP+I   +  L+  L
Sbjct: 200 CPIIASEVKALNANL 214


>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo
           sapiens]
          Length = 1435

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 2/111 (1%)

Query: 21  PHKQPWPGLAQAHRDNKSTL--ARIIAQGLIKHNAESRIQNIHFGDRLNASAQVAPGLVG 78
           P K P    ++   D+  TL  A  IA+     N E+  ++ +    +    ++ P    
Sbjct: 572 PQKDPTADPSEPSADSYLTLSTAPTIAKAPFYVNGEAAERSSYENKEVEGELEMGPAGSS 631

Query: 79  WLISGRKHQQQQESSINITNIQLDCGGIQISFHKEWFSANISLEFDLELRP 129
           W    R+H+ ++  S+ + N   + GG             +S     E  P
Sbjct: 632 WCPDSREHRPRKHLSLRLCNRDPEPGGATEKMKTHQLENGLSRSVSQETEP 682


>gi|7657069 ERO1-like [Homo sapiens]
          Length = 468

 Score = 28.9 bits (63), Expect = 4.5
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 20/107 (18%)

Query: 148 FWLEKDEFGRRDLVIGKCDAEPSSVHVAILTEAIPPKMNQFLYNLKENLQKVLPHMVESQ 207
           FW +  + GRRD  +  C            ++ +P  +    Y   E    ++    ++ 
Sbjct: 87  FWNDISQCGRRDCAVKPCQ-----------SDEVPDGIKSASYKYSEEANNLIEECEQA- 134

Query: 208 VCPLIGEILGQLDVKLLKSLIEQEAAHEPTHHETSQPSACQAGESPS 254
                 E LG +D  L +    Q+A  + T H+ S  + C+A +  S
Sbjct: 135 ------ERLGAVDESLSEE--TQKAVLQWTKHDDSSDNFCEADDIQS 173


>gi|239755945 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 21  PHKQPWPGLAQAHRDNKST---------LARIIAQGLIKHNAESRIQNIHF---GDRLNA 68
           PH+ P PGLA       S          L+++ A G   H+ +SR + IH     D +N 
Sbjct: 59  PHRSPTPGLASLRGPPHSQWEPPSRAWGLSQLPANGQQAHDDDSRAELIHAFLDDDAING 118

Query: 69  SAQV 72
           +A+V
Sbjct: 119 AARV 122


>gi|239750458 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 12/64 (18%)

Query: 21  PHKQPWPGLAQAHRDNKST---------LARIIAQGLIKHNAESRIQNIHF---GDRLNA 68
           PH+ P PGLA       S          L+++ A G   H+ +SR + IH     D +N 
Sbjct: 59  PHRSPTPGLASLRGPPHSQWEPPSRAWGLSQLPANGQQAHDDDSRAELIHAFLDDDAING 118

Query: 69  SAQV 72
           +A+V
Sbjct: 119 AARV 122


>gi|40807482 LPLUNC1 protein precursor [Homo sapiens]
          Length = 484

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 20/96 (20%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 121 LEFDLELRPSFDNNIVKMCAHMSIVVE----FWLEKDEFGRRDLVIGKCDAEPSSVHVAI 176
           ++  L++   F+  +VK      +  E      ++    G   LV+  C     S+ + +
Sbjct: 110 VKIPLDMVAGFNTPLVKTIVEFHMTTEAQATIRMDTSASGPTRLVLSDCATSHGSLRIQL 169

Query: 177 LTEAIPPKMNQFLYNLKENLQKVLPHMVESQVCPLI 212
           L + +   +N     +   L   LP++V++Q+CP+I
Sbjct: 170 LHK-LSFLVNALAKQVMNLLVPSLPNLVKNQLCPVI 204


>gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]
          Length = 533

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 14/88 (15%)

Query: 15  LALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGLIKHNAESRIQNIHFGDRL-NASAQVA 73
           L    +PH +PW GLA+A      TL R  A      + +  IQ I  G  L NA   ++
Sbjct: 321 LTSAFSPHTKPWIGLAEA----LGTLMRAWA-----GSPKGTIQVITQGTSLKNAGNCLS 371

Query: 74  PGLVGWLISGRKHQQQQESSINITNIQL 101
           P ++  L+     +  +++ +N+ N +L
Sbjct: 372 PAVIVGLLK----EASKQADVNLVNAKL 395


>gi|46359075 zinc finger protein 423 [Homo sapiens]
          Length = 1284

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 48  LIKHNAESRIQNIHFGDRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQLDCGGIQ 107
           L KH  E+  +NI       + A+ +P      +S  K Q+   S+ +I+N +  C    
Sbjct: 580 LTKHIKENH-KNIPLAHSKKSKAEQSPVSSDVEVSSPKRQRLSASANSISNGEYPCNQCD 638

Query: 108 ISFHK-EWFSANISLEFDLELR 128
           + F   E F  ++ L  +L LR
Sbjct: 639 LKFSNFESFQTHLKLHLELLLR 660


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,776,580
Number of Sequences: 37866
Number of extensions: 389180
Number of successful extensions: 1063
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1052
Number of HSP's gapped (non-prelim): 17
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.