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Search of human proteins with 10947109
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10947109 T-cell leukemia/lymphoma 6 isoform TCL6a3 [Homo
sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10947107 T-cell leukemia/lymphoma 6 isoform TCL6a1 [Homo sapi... 295 8e-81
gi|10947109 T-cell leukemia/lymphoma 6 isoform TCL6a3 [Homo sapi... 295 8e-81
gi|10947105 T-cell leukemia/lymphoma 6 isoform TCL6a2 [Homo sapi... 295 8e-81
gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens] 30 0.86
gi|149944474 ATPase, class V, type 10B [Homo sapiens] 28 1.9
gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens] 27 5.6
gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 27 7.3
gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 27 7.3
gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens] 27 7.3
gi|89191868 von Willebrand factor preproprotein [Homo sapiens] 26 9.5
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 26 9.5
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 26 9.5
gi|46909596 a disintegrin and metalloproteinase domain 15 isofor... 26 9.5
gi|46909594 a disintegrin and metalloproteinase domain 15 isofor... 26 9.5
gi|46909592 a disintegrin and metalloproteinase domain 15 isofor... 26 9.5
gi|46909590 a disintegrin and metalloproteinase domain 15 isofor... 26 9.5
gi|215820652 StAR-related lipid transfer (START) domain containi... 26 9.5
gi|215820650 StAR-related lipid transfer (START) domain containi... 26 9.5
gi|31543659 StAR-related lipid transfer (START) domain containin... 26 9.5
gi|154937380 hypothetical protein LOC642475 [Homo sapiens] 26 9.5
>gi|10947107 T-cell leukemia/lymphoma 6 isoform TCL6a1 [Homo
sapiens]
Length = 141
Score = 295 bits (755), Expect = 8e-81
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV 60
MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV
Sbjct: 1 MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV 60
Query: 61 LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV 120
LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV
Sbjct: 61 LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV 120
Query: 121 RKRDRKPRGQVAAGPNPTSVM 141
RKRDRKPRGQVAAGPNPTSVM
Sbjct: 121 RKRDRKPRGQVAAGPNPTSVM 141
>gi|10947109 T-cell leukemia/lymphoma 6 isoform TCL6a3 [Homo
sapiens]
Length = 141
Score = 295 bits (755), Expect = 8e-81
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV 60
MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV
Sbjct: 1 MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV 60
Query: 61 LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV 120
LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV
Sbjct: 61 LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV 120
Query: 121 RKRDRKPRGQVAAGPNPTSVM 141
RKRDRKPRGQVAAGPNPTSVM
Sbjct: 121 RKRDRKPRGQVAAGPNPTSVM 141
>gi|10947105 T-cell leukemia/lymphoma 6 isoform TCL6a2 [Homo
sapiens]
Length = 141
Score = 295 bits (755), Expect = 8e-81
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV 60
MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV
Sbjct: 1 MEPRVTQRKRPLDGCMGKITGITSDILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDLLHV 60
Query: 61 LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV 120
LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV
Sbjct: 61 LPVAGSLQQSIDQCCLQLESLCRPGLLCAHPTLLFKLHSSMKNRPFFSLIYTYVKKTQQV 120
Query: 121 RKRDRKPRGQVAAGPNPTSVM 141
RKRDRKPRGQVAAGPNPTSVM
Sbjct: 121 RKRDRKPRGQVAAGPNPTSVM 141
>gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
Length = 985
Score = 29.6 bits (65), Expect = 0.86
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 10/50 (20%)
Query: 36 LSLPAKFPEVCGSDEVFPDP--------DLLHVLPVA--GSLQQSIDQCC 75
L+L A+ P + DEV+PDP + H L A +LQ S++ CC
Sbjct: 701 LALTAQVPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQTSVELCC 750
>gi|149944474 ATPase, class V, type 10B [Homo sapiens]
Length = 1461
Score = 28.5 bits (62), Expect = 1.9
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 25 DILKYDHKCFKLSLPAKFPEVCGSDEVFPDPDL-LHVLPVAGSLQQSIDQCCLQLESLCR 83
++ K D K F LP+K P + S+ V P+ L + + Q +++ L+L CR
Sbjct: 965 ELQKPDRKLFGFRLPSKTPSIT-SEAVVPEAGLVIDGKTLNAIFQGKLEKKFLELTQYCR 1023
Query: 84 PGLLCAHPTLLFK 96
+LC T L K
Sbjct: 1024 -SVLCCRSTPLQK 1035
>gi|226958575 RAS protein activator like 2 isoform 2 [Homo
sapiens]
Length = 1280
Score = 26.9 bits (58), Expect = 5.6
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 36 LSLPAKFPEVCGSDEVFPDPDLLHVLPVAGSLQQSIDQCCLQLESLCR 83
LS P FP + SD P DL V+PV+G++ + L LES+C+
Sbjct: 14 LSWPEMFPAL-ESDSPLPPEDLDAVVPVSGAVAGGMLDRIL-LESVCQ 59
>gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
Length = 184
Score = 26.6 bits (57), Expect = 7.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 2 EPRVTQRKRPLDGCMGKIT--GITSDI--LKYDHKCFKLSLPAKFPEVCGSDEVFPDPDL 57
E + TQ P G + G+T + L Y + ++L LPA FP V E P+
Sbjct: 66 EDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPEGQW 125
Query: 58 LH--VLPVAGSLQQSIDQ 73
H + +A LQ DQ
Sbjct: 126 QHQAEVQIARKLQCIADQ 143
>gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
Length = 184
Score = 26.6 bits (57), Expect = 7.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 2 EPRVTQRKRPLDGCMGKIT--GITSDI--LKYDHKCFKLSLPAKFPEVCGSDEVFPDPDL 57
E + TQ P G + G+T + L Y + ++L LPA FP V E P+
Sbjct: 66 EDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPEGQW 125
Query: 58 LH--VLPVAGSLQQSIDQ 73
H + +A LQ DQ
Sbjct: 126 QHQAEVQIARKLQCIADQ 143
>gi|23957690 component of oligomeric golgi complex 7 [Homo sapiens]
Length = 770
Score = 26.6 bits (57), Expect = 7.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 26 ILKYDHKCFKLSLPAKFPEVCGSD 49
+L Y +KC K+ L A + E+C SD
Sbjct: 220 LLAYYYKCHKVQLLAAWQELCQSD 243
>gi|89191868 von Willebrand factor preproprotein [Homo sapiens]
Length = 2813
Score = 26.2 bits (56), Expect = 9.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 67 LQQSIDQCCLQLESLCRP 84
L+Q+ DQCC + E +C P
Sbjct: 2312 LRQNADQCCPEYECVCDP 2329
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 65 GSLQQSIDQCCLQLESLCRPGLLCA 89
G L +D CC L RPG CA
Sbjct: 438 GFLDDCVDPCCDSLTCQLRPGAQCA 462
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 65 GSLQQSIDQCCLQLESLCRPGLLCA 89
G L +D CC L RPG CA
Sbjct: 438 GFLDDCVDPCCDSLTCQLRPGAQCA 462
>gi|46909596 a disintegrin and metalloproteinase domain 15 isoform 4
preproprotein [Homo sapiens]
Length = 838
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 65 GSLQQSIDQCCLQLESLCRPGLLCA 89
G L +D CC L RPG CA
Sbjct: 438 GFLDDCVDPCCDSLTCQLRPGAQCA 462
>gi|46909594 a disintegrin and metalloproteinase domain 15 isoform 3
preproprotein [Homo sapiens]
Length = 839
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 65 GSLQQSIDQCCLQLESLCRPGLLCA 89
G L +D CC L RPG CA
Sbjct: 438 GFLDDCVDPCCDSLTCQLRPGAQCA 462
>gi|46909592 a disintegrin and metalloproteinase domain 15 isoform 1
preproprotein [Homo sapiens]
Length = 772
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 65 GSLQQSIDQCCLQLESLCRPGLLCA 89
G L +D CC L RPG CA
Sbjct: 438 GFLDDCVDPCCDSLTCQLRPGAQCA 462
>gi|46909590 a disintegrin and metalloproteinase domain 15 isoform 2
preproprotein [Homo sapiens]
Length = 814
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 65 GSLQQSIDQCCLQLESLCRPGLLCA 89
G L +D CC L RPG CA
Sbjct: 438 GFLDDCVDPCCDSLTCQLRPGAQCA 462
>gi|215820652 StAR-related lipid transfer (START) domain containing
8 isoform b [Homo sapiens]
Length = 1023
Score = 26.2 bits (56), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 41 KFPEVCGSDEVFPDPDLLHVLPVAGSLQQSIDQCCLQLESLC 82
K P+ G VF P L+HV L QSI Q L S C
Sbjct: 560 KTPDYRGQ-HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
>gi|215820650 StAR-related lipid transfer (START) domain containing
8 isoform a [Homo sapiens]
Length = 1103
Score = 26.2 bits (56), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 41 KFPEVCGSDEVFPDPDLLHVLPVAGSLQQSIDQCCLQLESLC 82
K P+ G VF P L+HV L QSI Q L S C
Sbjct: 640 KTPDYRGQ-HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 680
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 26.2 bits (56), Expect = 9.5
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 41 KFPEVCGSDEVFPDPDLLHVLPVAGSLQQSIDQCCLQLESLC 82
K P+ G VF P L+HV L QSI Q L S C
Sbjct: 560 KTPDYRGQ-HVFGVPPLIHVQRTGQPLPQSIQQAMRYLRSQC 600
>gi|154937380 hypothetical protein LOC642475 [Homo sapiens]
Length = 719
Score = 26.2 bits (56), Expect = 9.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 112 TYVKKTQQVRKRDRKPRGQVAAGPNPTS 139
T T+ +R R +P+G +AGP P S
Sbjct: 20 TLTALTEGIRARQGQPQGPPSAGPQPKS 47
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,118,312
Number of Sequences: 37866
Number of extensions: 264376
Number of successful extensions: 479
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 467
Number of HSP's gapped (non-prelim): 20
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.