Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 14277126

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a
[Homo sapiens]
         (165 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...   350   4e-97
gi|19557636 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...   255   1e-68
gi|19557640 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...   255   1e-68
gi|22547215 peptidylprolyl isomerase-like 2 isoform b [Homo sapi...   120   7e-28
gi|22547212 peptidylprolyl isomerase-like 2 isoform a [Homo sapi...   120   7e-28
gi|7657473 peptidylprolyl isomerase-like 2 isoform a [Homo sapiens]   120   7e-28
gi|24308049 peptidylprolyl isomerase domain and WD repeat contai...   108   2e-24
gi|7706339 peptidylprolyl isomerase-like 1 [Homo sapiens]              91   3e-19
gi|64276486 serologically defined colon cancer antigen 10 [Homo ...    90   1e-18
gi|4826932 peptidylprolyl isomerase D [Homo sapiens]                   89   2e-18
gi|27735045 peptidylprolyl isomerase-like 6 isoform 1 [Homo sapi...    88   3e-18
gi|162329587 peptidylprolyl isomerase-like 6 isoform 2 [Homo sap...    88   3e-18
gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]        88   4e-18
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                  87   7e-18
gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]        85   2e-17
gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]         85   2e-17
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  85   3e-17
gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]             82   2e-16
gi|150418007 RAN binding protein 2 [Homo sapiens]                      82   2e-16
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]    82   3e-16
gi|4758950 peptidylprolyl isomerase B precursor [Homo sapiens]         81   4e-16
gi|4505991 peptidylprolyl isomerase C [Homo sapiens]                   78   3e-15
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]    78   4e-15
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]     78   4e-15
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...    78   4e-15
gi|5454154 peptidylprolyl isomerase H [Homo sapiens]                   77   9e-15
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...    76   2e-14
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...    76   2e-14
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]         76   2e-14
gi|239747688 PREDICTED: hypothetical protein XP_002348229 [Homo ...    74   6e-14

>gi|14277126 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo
           sapiens]
          Length = 165

 Score =  350 bits (897), Expect = 4e-97
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MSVTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSL 60
           MSVTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSL
Sbjct: 1   MSVTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSL 60

Query: 61  PRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT 120
           PRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT
Sbjct: 61  PRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT 120

Query: 121 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165
           VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ
Sbjct: 121 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165


>gi|19557636 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo
           sapiens]
          Length = 161

 Score =  255 bits (651), Expect = 1e-68
 Identities = 131/174 (75%), Positives = 137/174 (78%), Gaps = 22/174 (12%)

Query: 1   MSVTLHTDVGDIKIEVFCERTPKTCE---------MESRCVPQAGVQWRDLGSLQPPPPG 51
           MSVTLHTDVGDIKIEVFCERTPKTCE           + C+    ++   + +  P    
Sbjct: 1   MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTG-- 58

Query: 52  FKQVFCLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK 111
                      TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK
Sbjct: 59  -----------TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK 107

Query: 112 QPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165
           QPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ
Sbjct: 108 QPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 161


>gi|19557640 peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo
           sapiens]
          Length = 161

 Score =  255 bits (651), Expect = 1e-68
 Identities = 131/174 (75%), Positives = 137/174 (78%), Gaps = 22/174 (12%)

Query: 1   MSVTLHTDVGDIKIEVFCERTPKTCE---------MESRCVPQAGVQWRDLGSLQPPPPG 51
           MSVTLHTDVGDIKIEVFCERTPKTCE           + C+    ++   + +  P    
Sbjct: 1   MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTG-- 58

Query: 52  FKQVFCLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK 111
                      TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK
Sbjct: 59  -----------TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK 107

Query: 112 QPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165
           QPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ
Sbjct: 108 QPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 161


>gi|22547215 peptidylprolyl isomerase-like 2 isoform b [Homo
           sapiens]
          Length = 527

 Score =  120 bits (300), Expect = 7e-28
 Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 16/169 (9%)

Query: 3   VTLHTDVGDIKIEVFCERTPKTCEMESRCVPQ----AGVQWRDLGS--LQPPPPGFKQVF 56
           V LHT+ GD+ +E+ C+ TPKTCE   R   +      +  R + +  +Q   P      
Sbjct: 282 VRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDP------ 335

Query: 57  CLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLD 116
                 TG GG S WGK F+DE+   L H  RG++SMAN+GPN+N SQFFIT+    +LD
Sbjct: 336 ----TGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLD 391

Query: 117 MKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165
            K+T+FG+V+ G + L  +E +  + KT RP  ++ I   T+  +P+ +
Sbjct: 392 KKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEE 440


>gi|22547212 peptidylprolyl isomerase-like 2 isoform a [Homo
           sapiens]
          Length = 520

 Score =  120 bits (300), Expect = 7e-28
 Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 16/169 (9%)

Query: 3   VTLHTDVGDIKIEVFCERTPKTCEMESRCVPQ----AGVQWRDLGS--LQPPPPGFKQVF 56
           V LHT+ GD+ +E+ C+ TPKTCE   R   +      +  R + +  +Q   P      
Sbjct: 282 VRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDP------ 335

Query: 57  CLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLD 116
                 TG GG S WGK F+DE+   L H  RG++SMAN+GPN+N SQFFIT+    +LD
Sbjct: 336 ----TGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLD 391

Query: 117 MKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165
            K+T+FG+V+ G + L  +E +  + KT RP  ++ I   T+  +P+ +
Sbjct: 392 KKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEE 440


>gi|7657473 peptidylprolyl isomerase-like 2 isoform a [Homo sapiens]
          Length = 520

 Score =  120 bits (300), Expect = 7e-28
 Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 16/169 (9%)

Query: 3   VTLHTDVGDIKIEVFCERTPKTCEMESRCVPQ----AGVQWRDLGS--LQPPPPGFKQVF 56
           V LHT+ GD+ +E+ C+ TPKTCE   R   +      +  R + +  +Q   P      
Sbjct: 282 VRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDP------ 335

Query: 57  CLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLD 116
                 TG GG S WGK F+DE+   L H  RG++SMAN+GPN+N SQFFIT+    +LD
Sbjct: 336 ----TGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLD 391

Query: 117 MKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ 165
            K+T+FG+V+ G + L  +E +  + KT RP  ++ I   T+  +P+ +
Sbjct: 392 KKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPYEE 440


>gi|24308049 peptidylprolyl isomerase domain and WD repeat
           containing 1 [Homo sapiens]
          Length = 646

 Score =  108 bits (270), Expect = 2e-24
 Identities = 65/157 (41%), Positives = 88/157 (56%), Gaps = 4/157 (2%)

Query: 2   SVTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLP 61
           S  +HT +GDI  ++F    PKT  +E+ CV      +    +      GF  +      
Sbjct: 493 SAIIHTSMGDIHTKLFPVECPKT--VENFCVHSRNGYYNG-HTFHRIIKGF-MIQTGDPT 548

Query: 62  RTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTV 121
            TG GG SIWG +FEDE+   L+H+    +SMAN G NTNGSQFFIT    P LD K+TV
Sbjct: 549 GTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTV 608

Query: 122 FGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 158
           FG+V  G+E +  +  + VN KT +P  DV I +IT+
Sbjct: 609 FGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 645


>gi|7706339 peptidylprolyl isomerase-like 1 [Homo sapiens]
          Length = 166

 Score = 91.3 bits (225), Expect = 3e-19
 Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 19/159 (11%)

Query: 2   SVTLHTDVGDIKIEVFCERTPKTCEMESRCVPQA---GVQW----RDLGSLQPPPPGFKQ 54
           +V L T +G I +E++ +  PKTC+  +    +    G ++    +D       P G   
Sbjct: 13  NVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTG--- 69

Query: 55  VFCLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPH 114
                   TGRGG SI+GK+FEDE    LK    G+++MAN GP+TNGSQFF+T      
Sbjct: 70  --------TGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQW 121

Query: 115 LDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHI 153
           LD K+T+FG+V  G+  ++ +  +  N +  RP++DV I
Sbjct: 122 LDGKHTIFGRVCQGIGMVNRVGMVETNSQD-RPVDDVKI 159


>gi|64276486 serologically defined colon cancer antigen 10 [Homo
           sapiens]
          Length = 472

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 61/162 (37%), Positives = 86/162 (53%), Gaps = 6/162 (3%)

Query: 3   VTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPR 62
           V L T  GDI IE++ +  PK C    +   +A   + D        PGF  V       
Sbjct: 15  VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEA---YYDNTIFHRVVPGFI-VQGGDPTG 70

Query: 63  TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVF 122
           TG GG SI+G  F+DE+   L+ N RG+V+MAN G + NGSQFF T G+   L+ K+T+F
Sbjct: 71  TGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIF 130

Query: 123 GKVI-DGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 163
           GKV  D +  +  L ++ +++   RP N   IK   +  NPF
Sbjct: 131 GKVTGDTVYNMLRLSEVDIDDDE-RPHNPHKIKSCEVLFNPF 171


>gi|4826932 peptidylprolyl isomerase D [Homo sapiens]
          Length = 370

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 19/145 (13%)

Query: 9   VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFK--------QVFCLS 59
           VG I +E+F +  PKT E   + C  + G+     G     P  FK        + F + 
Sbjct: 29  VGRIVLELFADIVPKTAENFRALCTGEKGI-----GHTTGKPLHFKGCPFHRIIKKFMIQ 83

Query: 60  ----LPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHL 115
                 + G GG SI+G+KFEDE   Y KH+  G++SMAN G NTNGSQFFIT    PHL
Sbjct: 84  GGDFSNQNGTGGESIYGEKFEDENFHY-KHDREGLLSMANAGRNTNGSQFFITTVPTPHL 142

Query: 116 DMKYTVFGKVIDGLETLDELEKLPV 140
           D K+ VFG+VI G+     LE + V
Sbjct: 143 DGKHVVFGQVIKGIGVARILENVEV 167


>gi|27735045 peptidylprolyl isomerase-like 6 isoform 1 [Homo
           sapiens]
          Length = 311

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 15/164 (9%)

Query: 9   VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLS-------L 60
           +G +  E++C+  PKTC+  +  C  +AG   R +  L      F ++           +
Sbjct: 155 IGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGI-RLHYKNSIFHRIVQNGWIQGGDIV 213

Query: 61  PRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT 120
              G  G SI+G  FEDE +  + HN RGV+ MAN G ++NGSQF+IT    P+LD K+ 
Sbjct: 214 YGKGDNGESIYGPTFEDE-NFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFV 272

Query: 121 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 164
            FG++I+G E L +LE +P   +  RP   +H+  IT   +P+A
Sbjct: 273 AFGQLIEGTEVLKQLELVPTQNE--RP---IHMCRITDSGDPYA 311


>gi|162329587 peptidylprolyl isomerase-like 6 isoform 2 [Homo
           sapiens]
          Length = 279

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 15/164 (9%)

Query: 9   VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLS-------L 60
           +G +  E++C+  PKTC+  +  C  +AG   R +  L      F ++           +
Sbjct: 123 IGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGI-RLHYKNSIFHRIVQNGWIQGGDIV 181

Query: 61  PRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT 120
              G  G SI+G  FEDE +  + HN RGV+ MAN G ++NGSQF+IT    P+LD K+ 
Sbjct: 182 YGKGDNGESIYGPTFEDE-NFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFV 240

Query: 121 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFA 164
            FG++I+G E L +LE +P   +  RP   +H+  IT   +P+A
Sbjct: 241 AFGQLIEGTEVLKQLELVPTQNE--RP---IHMCRITDSGDPYA 279


>gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]
          Length = 296

 Score = 87.8 bits (216), Expect = 4e-18
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 64  GRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFG 123
           G GG SI+GKKF+DE +  LKH   G++SMAN+GPNTNGSQFF+T  K   LD K+ VFG
Sbjct: 208 GTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFG 266

Query: 124 KVIDGLETLDELEKLPVNEKTYRP 147
           +V +GL+ L ++EK   +  T +P
Sbjct: 267 EVTEGLDVLRQIEKQEESAITSQP 290


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score = 87.0 bits (214), Expect = 7e-18
 Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)

Query: 9   VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPRTGRGG 67
           +G +  E+F ++ PKT E   +    + G  ++         PGF           G GG
Sbjct: 17  LGRVSFELFADKVPKTAENFRALSTGEKGFGYKG-SCFHRIIPGFMCQGGDFTRHNGTGG 75

Query: 68  NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVID 127
            SI+G+KFEDE +  LKH   G++SMAN GPNTNGSQFFI   K   LD K+ VFGKV +
Sbjct: 76  KSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKE 134

Query: 128 GLETLDELEK 137
           G+  ++ +E+
Sbjct: 135 GMNIVEAMER 144


>gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]
          Length = 235

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 3/92 (3%)

Query: 64  GRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFG 123
           G GG SI+GKKF+DE +  LKH   G++SMAN+GPNTNGSQFF+T  K   LD K+ VFG
Sbjct: 142 GTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFG 200

Query: 124 KVIDGLETLDELEKLPVNEKTYRPLNDVHIKD 155
           +V +GL+ L ++E      K  +P   V I D
Sbjct: 201 EVTEGLDVLRQIE--AQGSKDGKPKQKVIIAD 230


>gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]
          Length = 301

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 3/92 (3%)

Query: 64  GRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFG 123
           G GG SI+GKKF+DE +  LKH   G++SMAN+GPNTNGSQFF+T  K   LD K+ VFG
Sbjct: 208 GTGGKSIYGKKFDDE-NFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFG 266

Query: 124 KVIDGLETLDELEKLPVNEKTYRPLNDVHIKD 155
           +V +GL+ L ++E      K  +P   V I D
Sbjct: 267 EVTEGLDVLRQIE--AQGSKDGKPKQKVIIAD 296


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 84.7 bits (208), Expect = 3e-17
 Identities = 61/160 (38%), Positives = 80/160 (50%), Gaps = 26/160 (16%)

Query: 10  GDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPR------ 62
           G +  E+F +  PKTCE     C  + G      G     P  +K      + +      
Sbjct: 22  GRVVFELFSDVCPKTCENFRCLCTGEKGT-----GKSTQKPLHYKSCLFHRVVKDFMVQG 76

Query: 63  ------TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLD 116
                  GRGG SI+G  FEDE S  +KHN   ++SMAN G +TNGSQFFIT    PHLD
Sbjct: 77  GDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLD 135

Query: 117 MKYTVFGKVIDGLETLDELEKLPVNEKT---YRPLNDVHI 153
             + VFG+VI G E + E+E    N+KT    +P  +V I
Sbjct: 136 GHHVVFGQVISGQEVVREIE----NQKTDAASKPFAEVRI 171


>gi|20911035 peptidylprolyl isomerase-like 4 [Homo sapiens]
          Length = 492

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 31/180 (17%)

Query: 1   MSVTLHTDVGDIKIEVFCERTPKTC---------EMESRCVPQAGVQWRDLGSLQPPPPG 51
           M+V L T +GD+ I+++ E  P+ C         +  + C+    VQ RD       P G
Sbjct: 1   MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIH-NVQ-RDFIIQTGDPTG 58

Query: 52  FKQVFCLSLPRTGRGGNSIWGKKFEDEYSEY-------LKHNVRGVVSMANNGPNTNGSQ 104
                      TGRGG SI+G+ + D+ S +       +KH  +G VSM NNG + +GSQ
Sbjct: 59  -----------TGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQ 107

Query: 105 FFITYGKQ-PHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 163
           F IT G+   +LD  +TVFG+V +G++ + ++ +  V +K + P  D+ I    I  +PF
Sbjct: 108 FLITTGENLDYLDGVHTVFGEVTEGMDIIKKINETFV-DKDFVPYQDIRINHTVILDDPF 166


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 3/129 (2%)

Query: 9    VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPRTGRGG 67
            +G I +E+F    P+T E   + C  + G  +++    +  P    Q   ++    G GG
Sbjct: 3077 LGRITMELFSNIVPRTAENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDIT-KHDGTGG 3135

Query: 68   NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVID 127
             SI+G KFEDE  + +KH   G++SMAN G NTN SQF IT  K  HLD K+ VFG V D
Sbjct: 3136 QSIYGDKFEDENFD-VKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKD 3194

Query: 128  GLETLDELE 136
            G++T+ ++E
Sbjct: 3195 GMDTVKKIE 3203


>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
          Length = 1462

 Score = 81.6 bits (200), Expect = 3e-16
 Identities = 58/160 (36%), Positives = 84/160 (52%), Gaps = 10/160 (6%)

Query: 9   VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPR----- 62
           VG I  ++F +  PKTC+     C  + G+       L      F +V    + +     
Sbjct: 20  VGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFS 79

Query: 63  --TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYT 120
              G+GG SI+G  F+DE +  LKH+   ++SMAN G +TNGSQFFIT    PHLD  + 
Sbjct: 80  EGNGKGGESIYGGYFKDE-NFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHV 138

Query: 121 VFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHA 160
           VFG VI G E ++++E L  +  + RP  DV + D  + A
Sbjct: 139 VFGLVISGFEVIEQIENLKTDAAS-RPYADVRVIDCGVLA 177


>gi|4758950 peptidylprolyl isomerase B precursor [Homo sapiens]
          Length = 216

 Score = 81.3 bits (199), Expect = 4e-16
 Identities = 46/92 (50%), Positives = 61/92 (66%), Gaps = 2/92 (2%)

Query: 64  GRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFG 123
           G GG SI+G++F DE  + LKH   G VSMAN G +TNGSQFFIT  K   LD K+ VFG
Sbjct: 112 GTGGKSIYGERFPDENFK-LKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFG 170

Query: 124 KVIDGLETLDELEKLPVNEKTYRPLNDVHIKD 155
           KV++G+E + ++E    + +  +PL DV I D
Sbjct: 171 KVLEGMEVVRKVESTKTDSRD-KPLKDVIIAD 201


>gi|4505991 peptidylprolyl isomerase C [Homo sapiens]
          Length = 212

 Score = 78.2 bits (191), Expect = 3e-15
 Identities = 47/90 (52%), Positives = 57/90 (63%), Gaps = 2/90 (2%)

Query: 64  GRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFG 123
           G GG SI+G+ F DE  + LKH   G VSMAN GP+TNGSQFFIT  K   LD K+ VFG
Sbjct: 106 GTGGVSIYGETFPDENFK-LKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFG 164

Query: 124 KVIDGLETLDELEKLPVNEKTYRPLNDVHI 153
           KVIDG+  +  +E L   +   RPL +  I
Sbjct: 165 KVIDGMTVVHSIE-LQATDGHDRPLTNCSI 193


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score = 77.8 bits (190), Expect = 4e-15
 Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 5/130 (3%)

Query: 9   VGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGS--LQPPPPGFKQVFCLSLPRTGRG 66
           +G I  E+F ++ PKT E  + C    G +             PGF           G G
Sbjct: 17  LGRISFELFADKFPKTAE--NFCALNTGEKGFGYKGCCFHRIIPGFMCHGGDFTHHNGTG 74

Query: 67  GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI 126
           G SI+G+K +D+ +  LKH   G++SMAN GPNTNGSQFFI   K   LD K+ V GKV 
Sbjct: 75  GKSIYGEKVDDD-NFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWLDSKHVVIGKVK 133

Query: 127 DGLETLDELE 136
           +G+  ++ +E
Sbjct: 134 EGMNIVEAME 143


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score = 77.8 bits (190), Expect = 4e-15
 Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 5/130 (3%)

Query: 9   VGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGS--LQPPPPGFKQVFCLSLPRTGRG 66
           +G I  E+F ++ PKT E  + C    G +             PGF           G G
Sbjct: 17  LGRISFELFADKFPKTAE--NFCALNTGEKGFGYKGCCFHRIIPGFMCHGGDFTHHNGTG 74

Query: 67  GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI 126
           G SI+G+K +D+ +  LKH   G++SMAN GPNTNGSQFFI   K   LD K+ V GKV 
Sbjct: 75  GKSIYGEKVDDD-NFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWLDSKHVVIGKVK 133

Query: 127 DGLETLDELE 136
           +G+  ++ +E
Sbjct: 134 EGMNIVEAME 143


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score = 77.8 bits (190), Expect = 4e-15
 Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 5/130 (3%)

Query: 9   VGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGS--LQPPPPGFKQVFCLSLPRTGRG 66
           +G I  E+F ++ PKT E  + C    G +             PGF           G G
Sbjct: 17  LGRISFELFADKFPKTAE--NFCALNTGEKGFGYKGCCFHRIIPGFMCHGGDFTHHNGTG 74

Query: 67  GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVI 126
           G SI+G+K +D+ +  LKH   G++SMAN GPNTNGSQFFI   K   LD K+ V GKV 
Sbjct: 75  GKSIYGEKVDDD-NFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWLDSKHVVIGKVK 133

Query: 127 DGLETLDELE 136
           +G+  ++ +E
Sbjct: 134 EGMNIVEAME 143


>gi|5454154 peptidylprolyl isomerase H [Homo sapiens]
          Length = 177

 Score = 76.6 bits (187), Expect = 9e-15
 Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 8/148 (5%)

Query: 8   DVGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLS----LPR 62
           +VG +KIE+F +  PKT E     C  +       +G          + F +     +  
Sbjct: 23  EVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82

Query: 63  TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVF 122
            G G  SI+   F DE  + L+H+  G++SMAN+GP+TNG QFFIT  K   LD K+ VF
Sbjct: 83  DGTGVASIYRGPFADENFK-LRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVF 141

Query: 123 GKVIDGLETLDELEKLPV--NEKTYRPL 148
           GK+IDGL  + ++E +P   N K   P+
Sbjct: 142 GKIIDGLLVMRKIENVPTGPNNKPKLPV 169


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 4/142 (2%)

Query: 9   VGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGS-LQPPPPGFKQVFCLSLPRTGRGG 67
           +G I I+ F ++ PKT E   R +      +R  GS      PGF           G G 
Sbjct: 17  LGRISIKQFADKIPKTAE-NFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGD 75

Query: 68  NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVID 127
            SI+G+KF+DE +   KH   G++SMAN GPNTNGSQFFI   K   LD K+  FGKV +
Sbjct: 76  KSIYGEKFDDE-NLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKE 134

Query: 128 GLETLDELEKLPV-NEKTYRPL 148
            +  ++ +E     N KT + +
Sbjct: 135 RVNIVEAMEHFGYRNSKTSKKI 156


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 4/142 (2%)

Query: 9   VGDIKIEVFCERTPKTCEMESRCVPQAGVQWRDLGS-LQPPPPGFKQVFCLSLPRTGRGG 67
           +G I I++F ++ PKT E   R +      +R  GS      PGF           G G 
Sbjct: 17  LGRISIKLFADKIPKTAE-NFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGD 75

Query: 68  NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVID 127
            SI+G+KF+DE +   KH   G++SMAN GPNTNGSQFFI   K   LD K+  FGKV +
Sbjct: 76  KSIYGEKFDDE-NLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKE 134

Query: 128 GLETLDELEKLPV-NEKTYRPL 148
            +  ++  E     N KT + +
Sbjct: 135 RVNIVEATEHFGYRNSKTSKKI 156


>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 9   VGDIKIEVFCERTPKTCE-MESRCVPQAGVQWRDLGSLQPPPPGFKQVFCLSLPRTGRGG 67
           +G + +E+  +  PKT E   + C  + G  ++   +     P F           G GG
Sbjct: 59  LGRVVLELKADVVPKTAENFRALCTGEKGFGYKG-STFHRVIPSFMCQAGDFTNHNGTGG 117

Query: 68  NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVID 127
            SI+G +F DE +  LKH   GV+SMAN GPNTNGSQFFI   K   LD K+ VFG V +
Sbjct: 118 KSIYGSRFPDE-NFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKE 176

Query: 128 GLETLDELE 136
           G++ + ++E
Sbjct: 177 GMDVVKKIE 185


>gi|239747688 PREDICTED: hypothetical protein XP_002348229 [Homo
           sapiens]
          Length = 105

 Score = 73.9 bits (180), Expect = 6e-14
 Identities = 37/72 (51%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 66  GGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKV 125
           GG SI+ +KF+DE +  LKH   G++SMAN GPN NGSQFFI   K   LD K+ VFGKV
Sbjct: 14  GGKSIYREKFDDE-NFILKHTGPGILSMANAGPNMNGSQFFICTAKTEWLDGKHVVFGKV 72

Query: 126 IDGLETLDELEK 137
            +G++ ++ +E+
Sbjct: 73  KEGMKIMEAMER 84


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,877,312
Number of Sequences: 37866
Number of extensions: 389301
Number of successful extensions: 996
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 142
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press