Search of human proteins with 14270490

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14270490 protocadherin gamma subfamily B, 1 isoform 2
precursor [Homo sapiens]
         (810 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precurs...  1598   0.0  
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs...  1584   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...  1112   0.0  
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs...  1112   0.0  
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs...  1080   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...  1080   0.0  
gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs...  1073   0.0  
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...  1071   0.0  
gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precurs...  1039   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...  1038   0.0  
gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precurs...  1030   0.0  
gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precurs...  1028   0.0  
gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precurs...  1019   0.0  
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs...  1019   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...   679   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...   679   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...   676   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...   676   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...   672   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...   672   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...   671   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...   671   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...   670   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...   670   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...   668   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...   668   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...   663   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...   663   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...   660   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...   660   0.0  

>gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 810

 Score = 1598 bits (4138), Expect = 0.0
 Identities = 810/810 (100%), Positives = 810/810 (100%)

Query: 1   MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP 60
           MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP
Sbjct: 1   MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP 60

Query: 61  TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI 120
           TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI
Sbjct: 61  TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI 120

Query: 121 QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK 180
           QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK
Sbjct: 121 QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK 180

Query: 181 ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS 240
           ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS
Sbjct: 181 ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS 240

Query: 241 QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN 300
           QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN
Sbjct: 241 QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN 300

Query: 301 GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT 360
           GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT
Sbjct: 301 GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT 360

Query: 361 VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA 420
           VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA
Sbjct: 361 VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA 420

Query: 421 TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN 480
           TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN
Sbjct: 421 TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN 480

Query: 481 GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 540
           GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA
Sbjct: 481 GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 540

Query: 541 NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL 600
           NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
Sbjct: 541 NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL 600

Query: 601 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF 660
           SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF
Sbjct: 601 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF 660

Query: 661 ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE 720
           ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE
Sbjct: 661 ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE 720

Query: 721 GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD 780
           GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD
Sbjct: 721 GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD 780

Query: 781 PSMVVCASNEDHKIAYDPSLSSHVSFCKSS 810
           PSMVVCASNEDHKIAYDPSLSSHVSFCKSS
Sbjct: 781 PSMVVCASNEDHKIAYDPSLSSHVSFCKSS 810


>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 927

 Score = 1584 bits (4102), Expect = 0.0
 Identities = 803/803 (100%), Positives = 803/803 (100%)

Query: 1   MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP 60
           MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP
Sbjct: 1   MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELP 60

Query: 61  TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI 120
           TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI
Sbjct: 61  TRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVI 120

Query: 121 QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK 180
           QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK
Sbjct: 121 QDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTK 180

Query: 181 ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS 240
           ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS
Sbjct: 181 ESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFS 240

Query: 241 QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN 300
           QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN
Sbjct: 241 QEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTN 300

Query: 301 GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT 360
           GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT
Sbjct: 301 GTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGT 360

Query: 361 VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA 420
           VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA
Sbjct: 361 VIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIA 420

Query: 421 TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN 480
           TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN
Sbjct: 421 TDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPN 480

Query: 481 GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 540
           GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA
Sbjct: 481 GRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 540

Query: 541 NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL 600
           NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL
Sbjct: 541 NVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWL 600

Query: 601 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF 660
           SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF
Sbjct: 601 SYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIF 660

Query: 661 ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE 720
           ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE
Sbjct: 661 ADSLQEVLPDLSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTE 720

Query: 721 GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD 780
           GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD
Sbjct: 721 GCFQTGLCSKSGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDD 780

Query: 781 PSMVVCASNEDHKIAYDPSLSSH 803
           PSMVVCASNEDHKIAYDPSLSSH
Sbjct: 781 PSMVVCASNEDHKIAYDPSLSSH 803


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 578/794 (72%), Positives = 653/794 (82%), Gaps = 5/794 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE-DY 71
           QVL PFLLSLF GA+  QIRY+IPEELA  S VG LAKDLGLSVR+LP RKLRVSAE +Y
Sbjct: 15  QVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAEKEY 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F V+ ESGDLLV+ RIDRE+ICG++  C L+F+TVAENP+N+F++ V++QDINDN P F 
Sbjct: 75  FTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFK 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
              I+L+I ES  PG  F LD A D+DV  NSL+ Y +N N+YF L+ K++PDG KYP L
Sbjct: 135 QTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +L+  LDRE  S H+L+LTA+DGGDPP SGTT I I+VTDANDN PVFSQ+VYRV+L+E+
Sbjct: 195 ILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRED 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSR 310
           VP G  VL+V ATD+DEGINAEITY+F N        FNLN  TG+ITT   LDFE  S 
Sbjct: 255 VPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASS 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y LS+EAKD G   AHC++Q+EI+D+ND APEV   S S  +PEDS  GTVIALIK RD+
Sbjct: 315 YTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDR 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG+NG V C       F L+S+SKNYYKLV  GAL+RE+  +YN+TI ATD GKP LSS
Sbjct: 375 DSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
              +TLHISD+NDNAPVF Q SY+VHV+ENNPPGASIAQ+SASDPDLGP+G+VSYSI+AS
Sbjct: 435 SIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DL+PRE+LSYVSVS QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD
Sbjct: 495 DLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
           LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP
Sbjct: 555 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD
Sbjct: 615 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
           LSDR EPSDPQ +LQFYLVVALALISVLF LAVILAI+LRLR SS  D   CFQ GL SK
Sbjct: 675 LSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMVVCASNE 790
            GPGV PN+SEGTLPYSYNLC+AS SAKTEFN LN+TPE+ P QDL+CD+ S      N 
Sbjct: 735 PGPGVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASW---EQNT 791

Query: 791 DHKIAYDPSLSSHV 804
           +H  A  P  S  +
Sbjct: 792 NHGAAGVPFASDTI 805


>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 811

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 578/794 (72%), Positives = 653/794 (82%), Gaps = 5/794 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE-DY 71
           QVL PFLLSLF GA+  QIRY+IPEELA  S VG LAKDLGLSVR+LP RKLRVSAE +Y
Sbjct: 15  QVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAEKEY 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F V+ ESGDLLV+ RIDRE+ICG++  C L+F+TVAENP+N+F++ V++QDINDN P F 
Sbjct: 75  FTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFK 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
              I+L+I ES  PG  F LD A D+DV  NSL+ Y +N N+YF L+ K++PDG KYP L
Sbjct: 135 QTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +L+  LDRE  S H+L+LTA+DGGDPP SGTT I I+VTDANDN PVFSQ+VYRV+L+E+
Sbjct: 195 ILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRED 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSR 310
           VP G  VL+V ATD+DEGINAEITY+F N        FNLN  TG+ITT   LDFE  S 
Sbjct: 255 VPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASS 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y LS+EAKD G   AHC++Q+EI+D+ND APEV   S S  +PEDS  GTVIALIK RD+
Sbjct: 315 YTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDR 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG+NG V C       F L+S+SKNYYKLV  GAL+RE+  +YN+TI ATD GKP LSS
Sbjct: 375 DSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
              +TLHISD+NDNAPVF Q SY+VHV+ENNPPGASIAQ+SASDPDLGP+G+VSYSI+AS
Sbjct: 435 SIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DL+PRE+LSYVSVS QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD
Sbjct: 495 DLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
           LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP
Sbjct: 555 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD
Sbjct: 615 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
           LSDR EPSDPQ +LQFYLVVALALISVLF LAVILAI+LRLR SS  D   CFQ GL SK
Sbjct: 675 LSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMVVCASNE 790
            GPGV PN+SEGTLPYSYNLC+AS SAKTEFN LN+TPE+ P QDL+CD+ S      N 
Sbjct: 735 PGPGVLPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASW---EQNT 791

Query: 791 DHKIAYDPSLSSHV 804
           +H  A  P  S  +
Sbjct: 792 NHGAAGVPFASDTI 805


>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1080 bits (2792), Expect = 0.0
 Identities = 562/781 (71%), Positives = 640/781 (81%), Gaps = 8/781 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-YF 72
           VLF FLLSLFC A+ +QIRY IPEE+  GS VG LA DLG SV+ELPTRKLRVS+E  YF
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYF 75

Query: 73  NVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVA 132
            VS ESG+LLV+ R+DRE+ICG+K  CALEFE VAENP+N +HV V I+DIND+ P+F  
Sbjct: 76  TVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQ 135

Query: 133 KGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLL 192
              +L+I ESA PG +F L+ A+DAD+  NSL+ Y ++ N  FSL  KE  DGSKYP L 
Sbjct: 136 NSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELA 195

Query: 193 LEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV 252
           LEK LDRE QS HRL+LTA+DGG PPLSGTT + I+VTDANDN PVF+++VYRVSL+ENV
Sbjct: 196 LEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENV 255

Query: 253 PWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYV 312
           P GT+VL+V ATDQDEGIN+EITY+F  +     +F+LN  +G+ITT   LDFEET  Y 
Sbjct: 256 PPGTTVLQVSATDQDEGINSEITYSFYRTG---QIFSLNSKSGEITTQKKLDFEETKEYS 312

Query: 313 LSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDS 372
           + VE +DGG   A C V+I I DENDN+PEVTF S    I E++  GT+IALIK+ D+DS
Sbjct: 313 MVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDS 372

Query: 373 GQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRT 432
           G+NG V C  Q EVPFK+ S+SKN YKLV  G L+REQT +YNVTI ATD+GKP LSS  
Sbjct: 373 GENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSI 432

Query: 433 SITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDL 492
           S+ LHI D+NDNAPVFHQASY+V V ENNPPGASIAQV ASD DLG NG+VSYSI+ASDL
Sbjct: 433 SVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDL 492

Query: 493 EPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLN 552
           EP  L SYVS+S QSGVVFAQRAFD+EQLR FELTLQARDQGSPALSANVSLRVLVGD N
Sbjct: 493 EPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRN 552

Query: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612
           DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL
Sbjct: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612

Query: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLS 672
           FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD++
Sbjct: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDIT 672

Query: 673 DRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSG 732
           DRP PSDPQ ELQFYLVVALALISVLFLLAVILA+ALRLRRSSS     CFQ GLC KSG
Sbjct: 673 DRPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLCVKSG 732

Query: 733 PGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS---MVVCASN 789
           P VPPN+S+GTLPYSYNLC+A H+ KTEFN L  + +++  QD+LC D S     +C S+
Sbjct: 733 PVVPPNYSQGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSS 791

Query: 790 E 790
           E
Sbjct: 792 E 792


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score = 1080 bits (2792), Expect = 0.0
 Identities = 562/781 (71%), Positives = 640/781 (81%), Gaps = 8/781 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-YF 72
           VLF FLLSLFC A+ +QIRY IPEE+  GS VG LA DLG SV+ELPTRKLRVS+E  YF
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYF 75

Query: 73  NVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVA 132
            VS ESG+LLV+ R+DRE+ICG+K  CALEFE VAENP+N +HV V I+DIND+ P+F  
Sbjct: 76  TVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQ 135

Query: 133 KGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLL 192
              +L+I ESA PG +F L+ A+DAD+  NSL+ Y ++ N  FSL  KE  DGSKYP L 
Sbjct: 136 NSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELA 195

Query: 193 LEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV 252
           LEK LDRE QS HRL+LTA+DGG PPLSGTT + I+VTDANDN PVF+++VYRVSL+ENV
Sbjct: 196 LEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENV 255

Query: 253 PWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYV 312
           P GT+VL+V ATDQDEGIN+EITY+F  +     +F+LN  +G+ITT   LDFEET  Y 
Sbjct: 256 PPGTTVLQVSATDQDEGINSEITYSFYRTG---QIFSLNSKSGEITTQKKLDFEETKEYS 312

Query: 313 LSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDS 372
           + VE +DGG   A C V+I I DENDN+PEVTF S    I E++  GT+IALIK+ D+DS
Sbjct: 313 MVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDS 372

Query: 373 GQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRT 432
           G+NG V C  Q EVPFK+ S+SKN YKLV  G L+REQT +YNVTI ATD+GKP LSS  
Sbjct: 373 GENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSI 432

Query: 433 SITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDL 492
           S+ LHI D+NDNAPVFHQASY+V V ENNPPGASIAQV ASD DLG NG+VSYSI+ASDL
Sbjct: 433 SVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDL 492

Query: 493 EPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLN 552
           EP  L SYVS+S QSGVVFAQRAFD+EQLR FELTLQARDQGSPALSANVSLRVLVGD N
Sbjct: 493 EPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRN 552

Query: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612
           DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL
Sbjct: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612

Query: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLS 672
           FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD++
Sbjct: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDIT 672

Query: 673 DRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSG 732
           DRP PSDPQ ELQFYLVVALALISVLFLLAVILA+ALRLRRSSS     CFQ GLC KSG
Sbjct: 673 DRPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLCVKSG 732

Query: 733 PGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS---MVVCASN 789
           P VPPN+S+GTLPYSYNLC+A H+ KTEFN L  + +++  QD+LC D S     +C S+
Sbjct: 733 PVVPPNYSQGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSS 791

Query: 790 E 790
           E
Sbjct: 792 E 792


>gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 803

 Score = 1073 bits (2774), Expect = 0.0
 Identities = 552/789 (69%), Positives = 644/789 (81%), Gaps = 8/789 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-YF 72
           VLF FLLSLFC A+ +QIRY IPEE+  GS VG LA DLG SV+ELPTRKLRVS+E  YF
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYF 75

Query: 73  NVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVA 132
            VS ESG+LLV+ R+DRE+ICG+K  CALEFE VAENP+N +HV V I+DIND+ P+F  
Sbjct: 76  TVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQ 135

Query: 133 KGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLL 192
              +L+I ESA PG +F L SA DAD+  N+L+ Y ++P+ +FSL  KE  DGSKYP ++
Sbjct: 136 NSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMV 195

Query: 193 LEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV 252
           L+ PLDRE Q S+ L LTA+D G PPLS T  I + VTDANDNAPVFSQ+VYRVSL ENV
Sbjct: 196 LKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSENV 255

Query: 253 PWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYV 312
             GT+VL+V ATDQDEG+NAEIT++F  +   T  F+LN NTG+IT   TLDFEE   Y 
Sbjct: 256 YPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ-FDLNSNTGEITVLNTLDFEEVKEYS 314

Query: 313 LSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDS 372
           + +EA+DGG   A C V++E++DENDNAPEV F S  N I ED++LGT IAL+KVRDKDS
Sbjct: 315 IVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDKDS 374

Query: 373 GQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRT 432
             NG VTC  + +VPFK+ ++S+N YKLV    L+REQ  +YN+T+ ATD+GKP LSS +
Sbjct: 375 RHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSSSS 434

Query: 433 SITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDL 492
           SITLHI D+NDNAPVF Q+SY+VHV+ENNPPGASI+QV ASDPDLGPNG+VSY I+ASDL
Sbjct: 435 SITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMASDL 494

Query: 493 EPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLN 552
           E REL SYVS+S +SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV D N
Sbjct: 495 EQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRN 554

Query: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612
           DNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL
Sbjct: 555 DNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 614

Query: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLS 672
           FSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD++
Sbjct: 615 FSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDIT 674

Query: 673 DRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSG 732
           DRP+PSD Q ELQFYLVVALALISVLFL+A+ILAIALRLRRSSS  +  CFQ GLC KS 
Sbjct: 675 DRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLCVKSE 734

Query: 733 PGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS---MVVCASN 789
             VPPN+SEGTLPYSYNLC+A H+ KTEFN L  + +++  QD+LC D S     +C S+
Sbjct: 735 SVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSS 793

Query: 790 E--DHKIAY 796
           E   H++++
Sbjct: 794 ELTSHQVSF 802


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score = 1072 bits (2771), Expect = 0.0
 Identities = 551/781 (70%), Positives = 639/781 (81%), Gaps = 6/781 (0%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-YF 72
           VLF FLLSLFC A+ +QIRY IPEE+  GS VG LA DLG SV+ELPTRKLRVS+E  YF
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSEKPYF 75

Query: 73  NVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFVA 132
            VS ESG+LLV+ R+DRE+ICG+K  CALEFE VAENP+N +HV V I+DIND+ P+F  
Sbjct: 76  TVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQ 135

Query: 133 KGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVLL 192
              +L+I ESA PG +F L SA DAD+  N+L+ Y ++P+ +FSL  KE  DGSKYP ++
Sbjct: 136 NSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMV 195

Query: 193 LEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENV 252
           L+ PLDRE Q S+ L LTA+D G PPLS T  I + VTDANDNAPVFSQ+VYRVSL ENV
Sbjct: 196 LKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSENV 255

Query: 253 PWGTSVLRVMATDQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYV 312
             GT+VL+V ATDQDEG+NAEIT++F  +   T  F+LN NTG+IT   TLDFEE   Y 
Sbjct: 256 YPGTTVLQVTATDQDEGVNAEITFSFSEASQITQ-FDLNSNTGEITVLNTLDFEEVKEYS 314

Query: 313 LSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDS 372
           + +EA+DGG   A C V++E++DENDNAPEV F S  N I ED++LGT IAL+KVRDKDS
Sbjct: 315 IVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDKDS 374

Query: 373 GQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRT 432
             NG VTC  + +VPFK+ ++S+N YKLV    L+REQ  +YN+T+ ATD+GKP LSS +
Sbjct: 375 RHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSSSS 434

Query: 433 SITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDL 492
           SITLHI D+NDNAPVF Q+SY+VHV+ENNPPGASI+QV ASDPDLGPNG+VSY I+ASDL
Sbjct: 435 SITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMASDL 494

Query: 493 EPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLN 552
           E REL SYVS+S +SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV D N
Sbjct: 495 EQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRN 554

Query: 553 DNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 612
           DNAPRVLYPALGPDGSALFDMVP AAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL
Sbjct: 555 DNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGL 614

Query: 613 FSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLS 672
           FSLGLRTGEVRTARALGDRDA RQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD++
Sbjct: 615 FSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDIT 674

Query: 673 DRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSG 732
           DRP+PSD Q ELQFYLVVALALISVLFL+A+ILAIALRLRRSSS  +  CFQ GLC KS 
Sbjct: 675 DRPDPSDLQAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLCVKSE 734

Query: 733 PGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS---MVVCASN 789
             VPPN+SEGTLPYSYNLC+A H+ KTEFN L  + +++  QD+LC D S     +C S+
Sbjct: 735 SVVPPNYSEGTLPYSYNLCVA-HTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSS 793

Query: 790 E 790
           E
Sbjct: 794 E 794


>gi|14270502 protocadherin gamma subfamily B, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 545/796 (68%), Positives = 621/796 (78%), Gaps = 3/796 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-Y 71
           QVLFP LL LF   +S+ IRY+IPEELA GS VG LAKDLGLSV ++  RKLRVSAE  +
Sbjct: 15  QVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F+V  ESGDLLV  RIDRE+IC  +  C L+ E V ENP+N+FHV+VVI+D+ND+AP+F 
Sbjct: 75  FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFD 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
            K I LEI ESA  G + SLD A D D+  NS+K Y IN N YFSL  + + DG KYP L
Sbjct: 135 KKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
            LEK LDRE Q SH LILTA+DGGDPP S T HI I V D NDN PVFS++ YR+SL EN
Sbjct: 195 SLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSEN 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSR 310
           +P G+ VL+V ATDQDEG+NAEI Y F ++  ST  +F+L+  TG I  N + DFE+  R
Sbjct: 255 LPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVER 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y + VEAKDGG  +  C V IEI+DENDN+PE+   S S+QI E+S  G V+AL K RD 
Sbjct: 315 YTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDL 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           D G NG V C  + ++PFK+ S+S NYYKLV  GAL+REQT +YNVTI+ATD+GKP LSS
Sbjct: 375 DFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
             SITL+++DINDNAPVF Q SYVVHV+ENNPPGASIAQVSASDPDLG NG +SYSI+AS
Sbjct: 435 SRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DLEP  + SYVSVS QSGVVFAQRAFDHEQLRAF LTLQARD GSP LSANVSLRVLVGD
Sbjct: 495 DLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAPRVLYPALGPDGSA FDMVPR+AEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL+FAD+LQE+LPD
Sbjct: 615 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
           LSDRP  SDPQ ELQFYLVVALALISVLFLLAVILAIALRLRRS S  T  CF  GLC K
Sbjct: 675 LSDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGLCVK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMVVCASNE 790
           SGP VPPN+SEGTLPYSYNLCIA H+   EFN L  +  +   +D++C      +   + 
Sbjct: 735 SGPVVPPNYSEGTLPYSYNLCIA-HTGTKEFNFLKCSVPLHSNEDMVCSVSPGALIPPHG 793

Query: 791 DHKIAYDPSLSSHVSF 806
              +   P   + VSF
Sbjct: 794 GEDLTSHPETLTSVSF 809


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 541/768 (70%), Positives = 613/768 (79%), Gaps = 3/768 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-Y 71
           QVLFP LL LF   +S+ IRY+IPEELA GS VG LAKDLGLSV ++  RKLRVSAE  +
Sbjct: 15  QVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F+V  ESGDLLV  RIDRE+IC  +  C L+ E V ENP+N+FHV+VVI+D+ND+AP+F 
Sbjct: 75  FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFD 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
            K I LEI ESA  G + SLD A D D+  NS+K Y IN N YFSL  + + DG KYP L
Sbjct: 135 KKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
            LEK LDRE Q SH LILTA+DGGDPP S T HI I V D NDN PVFS++ YR+SL EN
Sbjct: 195 SLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSEN 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSR 310
           +P G+ VL+V ATDQDEG+NAEI Y F ++  ST  +F+L+  TG I  N + DFE+  R
Sbjct: 255 LPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVER 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y + VEAKDGG  +  C V IEI+DENDN+PE+   S S+QI E+S  G V+AL K RD 
Sbjct: 315 YTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDL 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           D G NG V C  + ++PFK+ S+S NYYKLV  GAL+REQT +YNVTI+ATD+GKP LSS
Sbjct: 375 DFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
             SITL+++DINDNAPVF Q SYVVHV+ENNPPGASIAQVSASDPDLG NG +SYSI+AS
Sbjct: 435 SRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DLEP  + SYVSVS QSGVVFAQRAFDHEQLRAF LTLQARD GSP LSANVSLRVLVGD
Sbjct: 495 DLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAPRVLYPALGPDGSA FDMVPR+AEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL+FAD+LQE+LPD
Sbjct: 615 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
           LSDRP  SDPQ ELQFYLVVALALISVLFLLAVILAIALRLRRS S  T  CF  GLC K
Sbjct: 675 LSDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGLCVK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLC 778
           SGP VPPN+SEGTLPYSYNLCIA H+   EFN L  +  +   +D++C
Sbjct: 735 SGPVVPPNYSEGTLPYSYNLCIA-HTGTKEFNFLKCSVPLHSNEDMVC 781


>gi|14270496 protocadherin gamma subfamily B, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 814

 Score = 1030 bits (2663), Expect = 0.0
 Identities = 542/798 (67%), Positives = 622/798 (77%), Gaps = 4/798 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-Y 71
           ++LF FLLSL    +S+ IRY IPEEL  GS VG LAKDLG  V +LPTR LRV AE  +
Sbjct: 15  RMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKKF 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F VS E+G+LLV+ RIDRE+ICG+K  C LEFE VAE P+N FHV V+IQDINDN P F 
Sbjct: 75  FTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTFS 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
               +LEI E AL G  F+L+SAQD DV  NSL+ Y ++P+ +FSL  KE+ DGS+YP L
Sbjct: 135 QNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +L+ PLDRE Q  H L+LTA+DGG+P  S TT I + V DANDN PVF+Q++YRV++ EN
Sbjct: 195 VLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAEN 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPIST-SLFNLNPNTGDITTNGTLDFEETSR 310
           +P G+SVL+VMA D DEGINAEI YAF+N       LF L+  TG++TT G LDFEE   
Sbjct: 255 LPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERDS 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y + VEAKDGG HTA+C VQI+I DENDNAPE+T  S S  I ED++LGT +ALIK  D 
Sbjct: 315 YTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDL 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG NG + C  +   PFK+   +KN Y+LV  GAL+REQ  +YNVTI ATDKG P LSS
Sbjct: 375 DSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
             +ITLHI D+NDN PVFHQASY VHV+ENNPPGASIA V ASDPDLGPNG VSY I+AS
Sbjct: 435 SKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYIVAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DLEPREL SYVSVS +SGVVFAQRAFDHEQLRAFELTLQARDQGSP LSANVSLRVLV D
Sbjct: 495 DLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVLVDD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAP VLYPALGP+GSALFDMVPR+AEPGYLVTKVVAVDADSG+NAWLSYH++QASEP
Sbjct: 555 RNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVRTAR LGDR+AARQRLLV VRDGGQ PLSAT  LHLIFADSLQE+ PD
Sbjct: 615 GLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEIQPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
           LSDRP PSDPQ ELQF+LVVALALISVLFLLAVILAI+LRLR SS   TEG FQ G+C K
Sbjct: 675 LSDRPTPSDPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSRPATEGYFQPGVCFK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMVVCASNE 790
           + PGV P +SE TLPYSYN C ASHS+ TEF  LN+  E A PQDLLCD+ S     SN+
Sbjct: 735 TVPGVLPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDLLCDEASWF--ESND 792

Query: 791 DHKIAYDPSLSSHVSFCK 808
           + ++  +      VSF K
Sbjct: 793 NPEMPSNSGNLQKVSFFK 810


>gi|11128033 protocadherin gamma subfamily B, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score = 1028 bits (2658), Expect = 0.0
 Identities = 536/772 (69%), Positives = 611/772 (79%), Gaps = 2/772 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-Y 71
           ++LF FLLSL    +S+ IRY IPEEL  GS VG LAKDLG  V +LPTR LRV AE  +
Sbjct: 15  RMLFLFLLSLLDQVLSEPIRYAIPEELDRGSLVGNLAKDLGFGVGDLPTRNLRVIAEKKF 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F VS E+G+LLV+ RIDRE+ICG+K  C LEFE VAE P+N FHV V+IQDINDN P F 
Sbjct: 75  FTVSPENGNLLVSDRIDREEICGKKSTCVLEFEMVAEKPLNFFHVTVLIQDINDNPPTFS 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
               +LEI E AL G  F+L+SAQD DV  NSL+ Y ++P+ +FSL  KE+ DGS+YP L
Sbjct: 135 QNITELEISELALTGATFALESAQDPDVGVNSLQQYYLSPDPHFSLIQKENLDGSRYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +L+ PLDRE Q  H L+LTA+DGG+P  S TT I + V DANDN PVF+Q++YRV++ EN
Sbjct: 195 VLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAEN 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPIST-SLFNLNPNTGDITTNGTLDFEETSR 310
           +P G+SVL+VMA D DEGINAEI YAF+N       LF L+  TG++TT G LDFEE   
Sbjct: 255 LPAGSSVLKVMAIDMDEGINAEIIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERDS 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y + VEAKDGG HTA+C VQI+I DENDNAPE+T  S S  I ED++LGT +ALIK  D 
Sbjct: 315 YTIGVEAKDGGHHTAYCKVQIDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDL 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG NG + C  +   PFK+   +KN Y+LV  GAL+REQ  +YNVTI ATDKG P LSS
Sbjct: 375 DSGFNGEILCQLKGNFPFKIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
             +ITLHI D+NDN PVFHQASY VHV+ENNPPGASIA V ASDPDLGPNG VSY I+AS
Sbjct: 435 SKTITLHILDVNDNVPVFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYIVAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DLEPREL SYVSVS +SGVVFAQRAFDHEQLRAFELTLQARDQGSP LSANVSLRVLV D
Sbjct: 495 DLEPRELSSYVSVSARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVLVDD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAP VLYPALGP+GSALFDMVPR+AEPGYLVTKVVAVDADSG+NAWLSYH++QASEP
Sbjct: 555 RNDNAPLVLYPALGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVRTAR LGDR+AARQRLLV VRDGGQ PLSAT  LHLIFADSLQE+ PD
Sbjct: 615 GLFSLGLRTGEVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEIQPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
           LSDRP PSDPQ ELQF+LVVALALISVLFLLAVILAI+LRLR SS   TEG FQ G+C K
Sbjct: 675 LSDRPTPSDPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSRPATEGYFQPGVCFK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPS 782
           + PGV P +SE TLPYSYN C ASHS+ TEF  LN+  E A PQDLLCD+ S
Sbjct: 735 TVPGVLPTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDLLCDEAS 786


>gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 808

 Score = 1019 bits (2636), Expect = 0.0
 Identities = 526/774 (67%), Positives = 611/774 (78%), Gaps = 2/774 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-Y 71
           QVLFP LL LF   + + IRY+IPEELA GS VG LAKDLGLSV ++  R+LRVSAE  +
Sbjct: 15  QVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKLH 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F+V  +SGDLLV  RIDRE+IC  +  C L+ E V ENP+N+FHV+VVI+D+ND+AP+F 
Sbjct: 75  FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFR 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
              I+LEI ES   G+   L+SA+D D+  NSL  Y ++PN+YFSL  K++PDG KYP L
Sbjct: 135 KDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +L+K LDRE QS+H L+LTA+DGGDPP SGT  I I V DANDN PVFSQ+VYRVSL+E+
Sbjct: 195 VLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETSR 310
           VP GTS+LRV ATDQDEGIN+EITY+F   +  +  +F+L+  TG+I T   LDFEE  R
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVER 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y +++EAKD G  +  C V +E+VDENDN+PE+   S S+QI EDS  G V+AL K RD+
Sbjct: 315 YTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRDQ 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG+NG V C     VPFK+ S+S NYYKLV   AL+REQT +YNVTI ATD+GKP LSS
Sbjct: 375 DSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
             +ITLHI+D+NDNAPVF Q++Y+VHV ENN PGASIAQVSASDPD G NGRVSYS++AS
Sbjct: 435 SKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DLE R L SYVSVS QSGVVFAQRAFDHEQLR FELTLQARDQGSPALSANVSLRVLVGD
Sbjct: 495 DLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAPRVLYPALGPDGSALFD VPRAA+PGYLVTKVVAVDADSGHNAWLSYHV+QASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVR  RALGD+D+ RQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD
Sbjct: 615 GLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
            SD P PSD Q E+QFYLVVALALISVLFLLAVILAIALRLR+S S     CF++ LCSK
Sbjct: 675 FSDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVLCSK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMV 784
           SGP  PPN+SEGTLPY+YN C+       EFN           QD L  D  ++
Sbjct: 735 SGPVGPPNYSEGTLPYAYNFCVPGDQMNPEFNFFTSVDHCPATQDNLNKDSMLL 788


>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score = 1019 bits (2636), Expect = 0.0
 Identities = 526/774 (67%), Positives = 611/774 (78%), Gaps = 2/774 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAED-Y 71
           QVLFP LL LF   + + IRY+IPEELA GS VG LAKDLGLSV ++  R+LRVSAE  +
Sbjct: 15  QVLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRVSAEKLH 74

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F+V  +SGDLLV  RIDRE+IC  +  C L+ E V ENP+N+FHV+VVI+D+ND+AP+F 
Sbjct: 75  FSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFR 134

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
              I+LEI ES   G+   L+SA+D D+  NSL  Y ++PN+YFSL  K++PDG KYP L
Sbjct: 135 KDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPEL 194

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +L+K LDRE QS+H L+LTA+DGGDPP SGT  I I V DANDN PVFSQ+VYRVSL+E+
Sbjct: 195 VLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRED 254

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETSR 310
           VP GTS+LRV ATDQDEGIN+EITY+F   +  +  +F+L+  TG+I T   LDFEE  R
Sbjct: 255 VPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVER 314

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y +++EAKD G  +  C V +E+VDENDN+PE+   S S+QI EDS  G V+AL K RD+
Sbjct: 315 YTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRDQ 374

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG+NG V C     VPFK+ S+S NYYKLV   AL+REQT +YNVTI ATD+GKP LSS
Sbjct: 375 DSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLSS 434

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
             +ITLHI+D+NDNAPVF Q++Y+VHV ENN PGASIAQVSASDPD G NGRVSYS++AS
Sbjct: 435 SKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIAS 494

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
           DLE R L SYVSVS QSGVVFAQRAFDHEQLR FELTLQARDQGSPALSANVSLRVLVGD
Sbjct: 495 DLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGD 554

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAPRVLYPALGPDGSALFD VPRAA+PGYLVTKVVAVDADSGHNAWLSYHV+QASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEP 614

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLFSLGLRTGEVR  RALGD+D+ RQRLLVAVRDGGQPPLSATATLHL+FADSLQEVLPD
Sbjct: 615 GLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 674

Query: 671 LSDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSK 730
            SD P PSD Q E+QFYLVVALALISVLFLLAVILAIALRLR+S S     CF++ LCSK
Sbjct: 675 FSDHPTPSDSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVLCSK 734

Query: 731 SGPGVPPNHSEGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMV 784
           SGP  PPN+SEGTLPY+YN C+       EFN           QD L  D  ++
Sbjct: 735 SGPVGPPNYSEGTLPYAYNFCVPGDQMNPEFNFFTSVDHCPATQDNLNKDSMLL 788


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  679 bits (1753), Expect = 0.0
 Identities = 380/807 (47%), Positives = 509/807 (63%), Gaps = 29/807 (3%)

Query: 13  QVLFPF-LLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE-- 69
           ++L PF LL   C   S QIRY++PEEL  GS VG +AKDLGL  +EL  R +R+ +   
Sbjct: 12  ELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGR 71

Query: 70  -DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAP 128
              F ++  SG L+  GRIDRE++C +   C + F  + EN M ++ V V I DINDN P
Sbjct: 72  TQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFP 131

Query: 129 RFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKY 188
           RF  + + +++ E+A  G +  L  A+DADV  NSL+ Y ++ N +FSL      DG KY
Sbjct: 132 RFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY 191

Query: 189 PVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSL 248
           P L+LE+PLDRE ++ H L+LTA+DGGDP LSGTTHI + V DANDNAP+F+   Y VS+
Sbjct: 192 PELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSV 251

Query: 249 QENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEE 307
            EN+P GT +L + ATD DEGIN ++TY+F N     S  F L+ N G+I+T  +LD+EE
Sbjct: 252 PENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEE 311

Query: 308 TSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKV 367
           +  Y++ V A+DGG   A   V + + D NDNAPEV   S ++ I ED   GTVIAL  V
Sbjct: 312 SRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSV 371

Query: 368 RDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPA 427
            D DSG+NG + C     +PFKLE +  NYY L+    L+RE+T+DYN+T+   D G P 
Sbjct: 372 HDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP 431

Query: 428 LSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSI 487
           LS+ + I L ++D+NDN P F QASY   V+ENNP G SI  V+A DPD G N RV+YS+
Sbjct: 432 LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSL 491

Query: 488 LASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 547
                +   L SYVS++  +GV++A R+FD+EQLR  +L + A D G+P LS+NVSL + 
Sbjct: 492 AEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLF 551

Query: 548 VGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 607
           V D NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 552 VLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKA 611

Query: 608 SEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEV 667
           SEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ +  AD + ++
Sbjct: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDI 671

Query: 668 LPDLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCF 723
           L DL     P DP+  +L  YLVVA+A +S +FL  VI+ + LRLRR   S  L  EG  
Sbjct: 672 LADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG-- 729

Query: 724 QTGLCSKSGPGVPPNHSEGT-------LPYSYNLCIASHSAKTE--FNSLNLTPEMAPPQ 774
                     GVP +H  G          YS+ + + + S K+   F   N    +   +
Sbjct: 730 ------SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEE 783

Query: 775 DLLCDDPSMV---VCASNEDHKIAYDP 798
                +P ++   V A+ E+ ++   P
Sbjct: 784 SCEKSEPLLMSDKVDANKEERRVQQAP 810


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score =  679 bits (1751), Expect = 0.0
 Identities = 373/763 (48%), Positives = 493/763 (64%), Gaps = 24/763 (3%)

Query: 13  QVLFPF-LLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE-- 69
           ++L PF LL   C   S QIRY++PEEL  GS VG +AKDLGL  +EL  R +R+ +   
Sbjct: 12  ELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGR 71

Query: 70  -DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAP 128
              F ++  SG L+  GRIDRE++C +   C + F  + EN M ++ V V I DINDN P
Sbjct: 72  TQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFP 131

Query: 129 RFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKY 188
           RF  + + +++ E+A  G +  L  A+DADV  NSL+ Y ++ N +FSL      DG KY
Sbjct: 132 RFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKY 191

Query: 189 PVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSL 248
           P L+LE+PLDRE ++ H L+LTA+DGGDP LSGTTHI + V DANDNAP+F+   Y VS+
Sbjct: 192 PELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSV 251

Query: 249 QENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEE 307
            EN+P GT +L + ATD DEGIN ++TY+F N     S  F L+ N G+I+T  +LD+EE
Sbjct: 252 PENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEE 311

Query: 308 TSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKV 367
           +  Y++ V A+DGG   A   V + + D NDNAPEV   S ++ I ED   GTVIAL  V
Sbjct: 312 SRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSV 371

Query: 368 RDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPA 427
            D DSG+NG + C     +PFKLE +  NYY L+    L+RE+T+DYN+T+   D G P 
Sbjct: 372 HDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPP 431

Query: 428 LSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSI 487
           LS+ + I L ++D+NDN P F QASY   V+ENNP G SI  V+A DPD G N RV+YS+
Sbjct: 432 LSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSL 491

Query: 488 LASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 547
                +   L SYVS++  +GV++A R+FD+EQLR  +L + A D G+P LS+NVSL + 
Sbjct: 492 AEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLF 551

Query: 548 VGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 607
           V D NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 552 VLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKA 611

Query: 608 SEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEV 667
           SEPGLF++GL TGEVRTARAL DRDA +Q L+VAV D GQPPLSAT T+ +  AD + ++
Sbjct: 612 SEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDI 671

Query: 668 LPDLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCF 723
           L DL     P DP+  +L  YLVVA+A +S +FL  VI+ + LRLRR   S  L  EG  
Sbjct: 672 LADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG-- 729

Query: 724 QTGLCSKSGPGVPPNHSEGT-------LPYSYNLCIASHSAKT 759
                     GVP +H  G          YS+ + + + S K+
Sbjct: 730 ------SRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKS 766


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  676 bits (1743), Expect = 0.0
 Identities = 359/733 (48%), Positives = 487/733 (66%), Gaps = 8/733 (1%)

Query: 11  KSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRV---S 67
           K  VL   LL         QIRY++PEEL  GSRVG +++DLGL  REL  R +R+    
Sbjct: 11  KGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRG 70

Query: 68  AEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNA 127
               F ++  SG L+  GRIDRE++C   ++C L  + + E+ + ++ V V ++DINDNA
Sbjct: 71  RTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNA 130

Query: 128 PRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSK 187
           P F    ++++I E+A   ++F L  A D D+  NSL+ Y ++PN +FSL  +   DGSK
Sbjct: 131 PYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSK 190

Query: 188 YPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVS 247
           YP L+L++ LDRE +++H L+LTA DGGDP  +GT  I + V DANDNAP F+Q  YR S
Sbjct: 191 YPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRAS 250

Query: 248 LQENVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFE 306
           + EN+  GT +L V ATD DEG+NAE+ Y+F      +  +F L+ N+G I+T G LD E
Sbjct: 251 VPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHE 310

Query: 307 ETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIK 366
           E+  Y + V+A D   ++A   V I ++D NDNAPEV   S ++ +PE+S  GT+IAL+ 
Sbjct: 311 ESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLN 370

Query: 367 VRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKP 426
           V D+DS +NG V C+ Q  +PFKLE +  NYY LV    L+REQ   YN+T+ ATD+G P
Sbjct: 371 VNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTP 430

Query: 427 ALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYS 486
            LS+ T I+L+++D NDN PVF QASY  ++ ENNP G S+  V+A DPD   N +++YS
Sbjct: 431 PLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYS 490

Query: 487 ILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRV 546
           +  + ++   L SYVS++  +GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL +
Sbjct: 491 LAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSL 550

Query: 547 LVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQ 606
            V D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610

Query: 607 ASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQE 666
           ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ +
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQ 670

Query: 667 VLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGC 722
           VL DL     P++ +T +L  YLVVA+A +S +FL  VIL +ALRLRR   S  L   G 
Sbjct: 671 VLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGG 730

Query: 723 FQTGLCSKSGPGV 735
             TG  +    GV
Sbjct: 731 GLTGAPASHFVGV 743


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score =  676 bits (1743), Expect = 0.0
 Identities = 359/733 (48%), Positives = 487/733 (66%), Gaps = 8/733 (1%)

Query: 11  KSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRV---S 67
           K  VL   LL         QIRY++PEEL  GSRVG +++DLGL  REL  R +R+    
Sbjct: 11  KGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRG 70

Query: 68  AEDYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNA 127
               F ++  SG L+  GRIDRE++C   ++C L  + + E+ + ++ V V ++DINDNA
Sbjct: 71  RTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNA 130

Query: 128 PRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSK 187
           P F    ++++I E+A   ++F L  A D D+  NSL+ Y ++PN +FSL  +   DGSK
Sbjct: 131 PYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSK 190

Query: 188 YPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVS 247
           YP L+L++ LDRE +++H L+LTA DGGDP  +GT  I + V DANDNAP F+Q  YR S
Sbjct: 191 YPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRAS 250

Query: 248 LQENVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFE 306
           + EN+  GT +L V ATD DEG+NAE+ Y+F      +  +F L+ N+G I+T G LD E
Sbjct: 251 VPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHE 310

Query: 307 ETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIK 366
           E+  Y + V+A D   ++A   V I ++D NDNAPEV   S ++ +PE+S  GT+IAL+ 
Sbjct: 311 ESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLN 370

Query: 367 VRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKP 426
           V D+DS +NG V C+ Q  +PFKLE +  NYY LV    L+REQ   YN+T+ ATD+G P
Sbjct: 371 VNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTP 430

Query: 427 ALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYS 486
            LS+ T I+L+++D NDN PVF QASY  ++ ENNP G S+  V+A DPD   N +++YS
Sbjct: 431 PLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYS 490

Query: 487 ILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRV 546
           +  + ++   L SYVS++  +GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL +
Sbjct: 491 LAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSL 550

Query: 547 LVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQ 606
            V D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610

Query: 607 ASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQE 666
           ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ +
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQ 670

Query: 667 VLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGC 722
           VL DL     P++ +T +L  YLVVA+A +S +FL  VIL +ALRLRR   S  L   G 
Sbjct: 671 VLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGG 730

Query: 723 FQTGLCSKSGPGV 735
             TG  +    GV
Sbjct: 731 GLTGAPASHFVGV 743


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score =  672 bits (1735), Expect = 0.0
 Identities = 359/741 (48%), Positives = 488/741 (65%), Gaps = 8/741 (1%)

Query: 3   RAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTR 62
           R++E++     VL      +   A ++QI Y+IPEEL  GS VG ++KDLGL+ REL  R
Sbjct: 7   RSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAER 66

Query: 63  KLRVSAE---DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVV 119
            +R+ +      F+++  SG L+  GRIDRE++C +   C + F  + E+ + +F + + 
Sbjct: 67  GVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIE 126

Query: 120 IQDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLST 179
           + DINDNAP+F A+ +D++I E+   G++F L  A D DV  NSL+ Y ++PN++FSL  
Sbjct: 127 VTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRV 186

Query: 180 KESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVF 239
           +   +G KYP L+LE  LDRE ++ H L+LTA DGGDP  SGT  + + V DANDNAPVF
Sbjct: 187 QSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVF 246

Query: 240 SQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDIT 298
           +   YRVS+ EN+P GT +L V ATD+DEG N E+TY+F   P +  L F LN  TG+I 
Sbjct: 247 TLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIK 306

Query: 299 TNGTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDL 358
            +  LD+EET  Y + ++A+DGG + A   V I + D NDN+PE+T  S  + + EDS L
Sbjct: 307 ISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPL 366

Query: 359 GTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTI 418
           GTV+AL+ V D DS QNG VTC     +PFKLE +  +YY+LVI  AL+REQ + YN+T+
Sbjct: 367 GTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITV 426

Query: 419 IATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLG 478
            ATD G P LS+     L ++DINDN P F Q SY  ++ ENN  GASI  V+A DPD  
Sbjct: 427 TATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSK 486

Query: 479 PNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 538
            N ++ YS+    ++   L SY+S++  +GV++A R+FD+EQ    ++ + A D G P L
Sbjct: 487 ENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPL 546

Query: 539 SANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598
           S+NVSL + V D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NA
Sbjct: 547 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 606

Query: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658
           WLSY +L+ASEPGLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +
Sbjct: 607 WLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 666

Query: 659 IFADSLQEVLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---S 714
             ADS+ +VL DL     P++ +T +L  YLVVA+A +S +FL  VI+ +A RLRR   S
Sbjct: 667 AVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 726

Query: 715 SSLDTEGCFQTGLCSKSGPGV 735
             L   G   TG+      GV
Sbjct: 727 RLLQASGGGLTGVSGSHFVGV 747


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score =  672 bits (1735), Expect = 0.0
 Identities = 359/741 (48%), Positives = 488/741 (65%), Gaps = 8/741 (1%)

Query: 3   RAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTR 62
           R++E++     VL      +   A ++QI Y+IPEEL  GS VG ++KDLGL+ REL  R
Sbjct: 7   RSKESKDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAER 66

Query: 63  KLRVSAE---DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVV 119
            +R+ +      F+++  SG L+  GRIDRE++C +   C + F  + E+ + +F + + 
Sbjct: 67  GVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIE 126

Query: 120 IQDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLST 179
           + DINDNAP+F A+ +D++I E+   G++F L  A D DV  NSL+ Y ++PN++FSL  
Sbjct: 127 VTDINDNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRV 186

Query: 180 KESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVF 239
           +   +G KYP L+LE  LDRE ++ H L+LTA DGGDP  SGT  + + V DANDNAPVF
Sbjct: 187 QSRANGVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVF 246

Query: 240 SQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDIT 298
           +   YRVS+ EN+P GT +L V ATD+DEG N E+TY+F   P +  L F LN  TG+I 
Sbjct: 247 TLPEYRVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIK 306

Query: 299 TNGTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDL 358
            +  LD+EET  Y + ++A+DGG + A   V I + D NDN+PE+T  S  + + EDS L
Sbjct: 307 ISENLDYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPL 366

Query: 359 GTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTI 418
           GTV+AL+ V D DS QNG VTC     +PFKLE +  +YY+LVI  AL+REQ + YN+T+
Sbjct: 367 GTVVALLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITV 426

Query: 419 IATDKGKPALSSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLG 478
            ATD G P LS+     L ++DINDN P F Q SY  ++ ENN  GASI  V+A DPD  
Sbjct: 427 TATDGGSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSK 486

Query: 479 PNGRVSYSILASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPAL 538
            N ++ YS+    ++   L SY+S++  +GV++A R+FD+EQ    ++ + A D G P L
Sbjct: 487 ENAQIIYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPL 546

Query: 539 SANVSLRVLVGDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNA 598
           S+NVSL + V D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NA
Sbjct: 547 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 606

Query: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658
           WLSY +L+ASEPGLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +
Sbjct: 607 WLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 666

Query: 659 IFADSLQEVLPDLSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRR---S 714
             ADS+ +VL DL     P++ +T +L  YLVVA+A +S +FL  VI+ +A RLRR   S
Sbjct: 667 AVADSIPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKS 726

Query: 715 SSLDTEGCFQTGLCSKSGPGV 735
             L   G   TG+      GV
Sbjct: 727 RLLQASGGGLTGVSGSHFVGV 747


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  671 bits (1732), Expect = 0.0
 Identities = 369/759 (48%), Positives = 498/759 (65%), Gaps = 23/759 (3%)

Query: 18  FLLSLFCG----AISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
           FLLS+  G    A + +I Y++ EE   GS VG +AKDLGL  REL  R +R+ +     
Sbjct: 14  FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73

Query: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
            F ++  SG L+  GRIDRE+IC +   C + F  + E+ MN++ + V I DINDN PRF
Sbjct: 74  LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133

Query: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
           + + I+++I E+  PGV+F L  A D DV  NSL+ Y ++PN++FSL+ +   D +KYP 
Sbjct: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193

Query: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
           L+LE+ LDRE +  H L+LTA DGGDPP S T HI + V D ND+ PVFS   Y+V++ E
Sbjct: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253

Query: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETS 309
           NVP GT +L V A D DEG+N E+TY+F   +P    +F+LN  TG+I+T   LD+EET+
Sbjct: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313

Query: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
            Y + V+A+DG        V I ++D NDNAPEVT  S S+ IPED+ LGTVIAL  ++D
Sbjct: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373

Query: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
           +DSG+NG VTC   E +PFKLE +  NYY+LV    L+RE  + YN+T+ ATD G P LS
Sbjct: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433

Query: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
             T I + ++D NDN P F  +SY V+++ENNP GASI  V+A D D   N +++YS+  
Sbjct: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493

Query: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
             ++   + SYVS++  +GV++A ++FD+EQLR  +L + A D G P LS+N+SL + V 
Sbjct: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553

Query: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
           D NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613

Query: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
           PGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL 
Sbjct: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673

Query: 670 DLSDRPEPSDP--QTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGL 727
           DL    EPSD     +L  YLVVA+A +S +FL  V++ +ALRLRR          + GL
Sbjct: 674 DLGSL-EPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732

Query: 728 CSKSGPGVPPNHSEG-------TLPYSYNLCIASHSAKT 759
            +     VP +H  G          YS+ + + + S K+
Sbjct: 733 AN-----VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKS 766


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score =  671 bits (1732), Expect = 0.0
 Identities = 369/759 (48%), Positives = 498/759 (65%), Gaps = 23/759 (3%)

Query: 18  FLLSLFCG----AISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
           FLLS+  G    A + +I Y++ EE   GS VG +AKDLGL  REL  R +R+ +     
Sbjct: 14  FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73

Query: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
            F ++  SG L+  GRIDRE+IC +   C + F  + E+ MN++ + V I DINDN PRF
Sbjct: 74  LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133

Query: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
           + + I+++I E+  PGV+F L  A D DV  NSL+ Y ++PN++FSL+ +   D +KYP 
Sbjct: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193

Query: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
           L+LE+ LDRE +  H L+LTA DGGDPP S T HI + V D ND+ PVFS   Y+V++ E
Sbjct: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253

Query: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETS 309
           NVP GT +L V A D DEG+N E+TY+F   +P    +F+LN  TG+I+T   LD+EET+
Sbjct: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313

Query: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
            Y + V+A+DG        V I ++D NDNAPEVT  S S+ IPED+ LGTVIAL  ++D
Sbjct: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373

Query: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
           +DSG+NG VTC   E +PFKLE +  NYY+LV    L+RE  + YN+T+ ATD G P LS
Sbjct: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433

Query: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
             T I + ++D NDN P F  +SY V+++ENNP GASI  V+A D D   N +++YS+  
Sbjct: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493

Query: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
             ++   + SYVS++  +GV++A ++FD+EQLR  +L + A D G P LS+N+SL + V 
Sbjct: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553

Query: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
           D NDN P +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613

Query: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
           PGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL 
Sbjct: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673

Query: 670 DLSDRPEPSDP--QTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGL 727
           DL    EPSD     +L  YLVVA+A +S +FL  V++ +ALRLRR          + GL
Sbjct: 674 DLGSL-EPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732

Query: 728 CSKSGPGVPPNHSEG-------TLPYSYNLCIASHSAKT 759
            +     VP +H  G          YS+ + + + S K+
Sbjct: 733 AN-----VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKS 766


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  670 bits (1728), Expect = 0.0
 Identities = 359/706 (50%), Positives = 477/706 (67%), Gaps = 5/706 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE--- 69
           QVL   LL    GA + QIRY+IPEEL  GS VG + KDLGL  +EL    +R+ +    
Sbjct: 13  QVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRM 72

Query: 70  DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPR 129
             F+++  +G L+  GRIDRE++C +   C + F  + E+ +N++ V V I DINDN PR
Sbjct: 73  QLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPR 132

Query: 130 FVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYP 189
           F+ + ++++I E+A P  +F L    D DV  NSL+ + ++ N +FS+  +    G KYP
Sbjct: 133 FLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYP 192

Query: 190 VLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQ 249
            L+LE  LDRE ++ +RL+LTAMDGGDP  S    I + V D NDN P+F+Q VYRVS+ 
Sbjct: 193 ELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVP 252

Query: 250 ENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEET 308
           EN+P GT VL V ATDQDEG++ E+TY+F+      S +F LN  TG+I+T+  LD+E++
Sbjct: 253 ENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDS 312

Query: 309 SRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVR 368
           S Y L VEA+DG        V I I+D NDN PEV   S S  I E +  GTVIAL +V 
Sbjct: 313 SFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVF 372

Query: 369 DKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPAL 428
           D+DSG NG+VTC     +PF+LE +  NYY+LV   AL+RE+   YN+T+ ATDKG P L
Sbjct: 373 DRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPL 432

Query: 429 SSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSIL 488
           S+ T I+L+++D NDN P F  +SY V+V ENNP GASI  V+A DPD+  N +VSYS+ 
Sbjct: 433 STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLA 492

Query: 489 ASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 548
              L+   L SYVS++  +G+++A R+FD+EQLR  +L + A D G P LS+NVSL + V
Sbjct: 493 EDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFV 552

Query: 549 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 608
            D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 609 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 668
           EPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 669 PDL-SDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRR 713
            DL S  P      ++L  YLVVA+A +S +FL  VI+ +ALRL+R
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  670 bits (1728), Expect = 0.0
 Identities = 359/706 (50%), Positives = 477/706 (67%), Gaps = 5/706 (0%)

Query: 13  QVLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE--- 69
           QVL   LL    GA + QIRY+IPEEL  GS VG + KDLGL  +EL    +R+ +    
Sbjct: 13  QVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRM 72

Query: 70  DYFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPR 129
             F+++  +G L+  GRIDRE++C +   C + F  + E+ +N++ V V I DINDN PR
Sbjct: 73  QLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPR 132

Query: 130 FVAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYP 189
           F+ + ++++I E+A P  +F L    D DV  NSL+ + ++ N +FS+  +    G KYP
Sbjct: 133 FLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYP 192

Query: 190 VLLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQ 249
            L+LE  LDRE ++ +RL+LTAMDGGDP  S    I + V D NDN P+F+Q VYRVS+ 
Sbjct: 193 ELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVP 252

Query: 250 ENVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEET 308
           EN+P GT VL V ATDQDEG++ E+TY+F+      S +F LN  TG+I+T+  LD+E++
Sbjct: 253 ENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDS 312

Query: 309 SRYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVR 368
           S Y L VEA+DG        V I I+D NDN PEV   S S  I E +  GTVIAL +V 
Sbjct: 313 SFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVF 372

Query: 369 DKDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPAL 428
           D+DSG NG+VTC     +PF+LE +  NYY+LV   AL+RE+   YN+T+ ATDKG P L
Sbjct: 373 DRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPL 432

Query: 429 SSRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSIL 488
           S+ T I+L+++D NDN P F  +SY V+V ENNP GASI  V+A DPD+  N +VSYS+ 
Sbjct: 433 STETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLA 492

Query: 489 ASDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 548
              L+   L SYVS++  +G+++A R+FD+EQLR  +L + A D G P LS+NVSL + V
Sbjct: 493 EDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFV 552

Query: 549 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 608
            D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 609 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 668
           EPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 669 PDL-SDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRR 713
            DL S  P      ++L  YLVVA+A +S +FL  VI+ +ALRL+R
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQR 718


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score =  668 bits (1724), Expect = 0.0
 Identities = 363/757 (47%), Positives = 494/757 (65%), Gaps = 21/757 (2%)

Query: 19  LLSLFCGAI----SQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---DY 71
           LL +F G +    ++QIRY++PEE   GS VG ++KDLGL  REL  R +R+ +      
Sbjct: 16  LLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKTQL 75

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F V+  SG L+  GRIDRE++C     C L  E + E+ + ++ V V I DINDNAP F 
Sbjct: 76  FAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPSFQ 135

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
              +++++ E A+PG +F+L +A+D DV  NSL+ Y ++PN YFSL  +   DG+K P L
Sbjct: 136 EDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPEL 195

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +LE  LDRE +++H L+LTA+DGGDP   G   I + V D ND+ P+F+Q VYRVS+ EN
Sbjct: 196 VLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPEN 255

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSR 310
           +  GT VL V ATD DEGIN E+ Y+F N     S +F L+  TG++   G+LDFE+   
Sbjct: 256 ISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKYRF 315

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y + ++ +DGG       + I +VD NDNAPE+T  S  N I E+S  GTVIAL+ V+D+
Sbjct: 316 YEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQ 375

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG+NG V+C+    +PFKLE T  NYYKL+ +  L+RE    YN+T+ ATD+G P LS+
Sbjct: 376 DSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPLSA 435

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
            T + L+++D NDN PVF  +SY  ++ ENNP GASI  V+A DPD   N  V+YS+   
Sbjct: 436 ETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDD 495

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
            ++   L SYVS++  +GV++A ++FD+EQ R  EL + ARD G P LS+NVSL + V D
Sbjct: 496 TVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLD 555

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 556 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEP 615

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL D
Sbjct: 616 GLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 675

Query: 671 LSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCS 729
           L      ++ +T +L  YLVVA+A +S +FL+ VI+ +ALRL R          + GL  
Sbjct: 676 LGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGLA- 734

Query: 730 KSGPGVPPNHSEGT-------LPYSYNLCIASHSAKT 759
               G+P +H  G          YS+ + + + S K+
Sbjct: 735 ----GMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKS 767


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score =  668 bits (1724), Expect = 0.0
 Identities = 363/757 (47%), Positives = 494/757 (65%), Gaps = 21/757 (2%)

Query: 19  LLSLFCGAI----SQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---DY 71
           LL +F G +    ++QIRY++PEE   GS VG ++KDLGL  REL  R +R+ +      
Sbjct: 16  LLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKTQL 75

Query: 72  FNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRFV 131
           F V+  SG L+  GRIDRE++C     C L  E + E+ + ++ V V I DINDNAP F 
Sbjct: 76  FAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPSFQ 135

Query: 132 AKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPVL 191
              +++++ E A+PG +F+L +A+D DV  NSL+ Y ++PN YFSL  +   DG+K P L
Sbjct: 136 EDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPEL 195

Query: 192 LLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQEN 251
           +LE  LDRE +++H L+LTA+DGGDP   G   I + V D ND+ P+F+Q VYRVS+ EN
Sbjct: 196 VLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPEN 255

Query: 252 VPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETSR 310
           +  GT VL V ATD DEGIN E+ Y+F N     S +F L+  TG++   G+LDFE+   
Sbjct: 256 ISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKYRF 315

Query: 311 YVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDK 370
           Y + ++ +DGG       + I +VD NDNAPE+T  S  N I E+S  GTVIAL+ V+D+
Sbjct: 316 YEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQ 375

Query: 371 DSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSS 430
           DSG+NG V+C+    +PFKLE T  NYYKL+ +  L+RE    YN+T+ ATD+G P LS+
Sbjct: 376 DSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPLSA 435

Query: 431 RTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILAS 490
            T + L+++D NDN PVF  +SY  ++ ENNP GASI  V+A DPD   N  V+YS+   
Sbjct: 436 ETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDD 495

Query: 491 DLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGD 550
            ++   L SYVS++  +GV++A ++FD+EQ R  EL + ARD G P LS+NVSL + V D
Sbjct: 496 TVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLD 555

Query: 551 LNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610
            NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 556 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEP 615

Query: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPD 670
           GLF++G  TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ EVL D
Sbjct: 616 GLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 675

Query: 671 LSDRPEPSDPQT-ELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCS 729
           L      ++ +T +L  YLVVA+A +S +FL+ VI+ +ALRL R          + GL  
Sbjct: 676 LGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGLA- 734

Query: 730 KSGPGVPPNHSEGT-------LPYSYNLCIASHSAKT 759
               G+P +H  G          YS+ + + + S K+
Sbjct: 735 ----GMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKS 767


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  663 bits (1711), Expect = 0.0
 Identities = 354/730 (48%), Positives = 478/730 (65%), Gaps = 8/730 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
           VL  FLL+    A + QIRY++ EE+  GS VG +AKDLGL    L  + +R+ +     
Sbjct: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73

Query: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
            F ++  SG L+   RIDRE++C +   C L F  + E+ + ++ V V I DINDNAPRF
Sbjct: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133

Query: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
             + ++L+I E+  PG +  L +A DADV  N+L+ Y +NPN +FSL  +   DG+KYP 
Sbjct: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193

Query: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
           L+LE+ LDRE ++ H L+L A DGGDP LSGT+ I ++V DANDNAPVF+Q  YR+S+ E
Sbjct: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253

Query: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETS 309
           N   GT +L V ATD DEG  A++ Y    SP  TS +F L   +G++T    LD+E+ +
Sbjct: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313

Query: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
            + + +EA+DG        V + ++D NDNAPE    S ++ + EDS  GT+I L  V D
Sbjct: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373

Query: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
           +DSGQN   TC   E++PFKLE +  NYY+LV   AL+REQ + YN+T+ A D G P+LS
Sbjct: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433

Query: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
           +   I L ++DINDNAP F + SY  ++ ENNP GAS+  V+A DPD   N  V+YS   
Sbjct: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493

Query: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
             ++   L SY+S++  +GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553

Query: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
           D NDNAP +LYPA   DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613

Query: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
           PGLFS+GL TGEVRTARAL DRDA +Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 670 DL-SDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCFQT 725
           DL S  P      ++L  YLVVA+A +S +FL  VI+ +A RLRR   S  L   G   T
Sbjct: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSLT 733

Query: 726 GLCSKSGPGV 735
           G+ S    GV
Sbjct: 734 GMQSSHFVGV 743


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score =  663 bits (1711), Expect = 0.0
 Identities = 354/730 (48%), Positives = 478/730 (65%), Gaps = 8/730 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
           VL  FLL+    A + QIRY++ EE+  GS VG +AKDLGL    L  + +R+ +     
Sbjct: 14  VLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQ 73

Query: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
            F ++  SG L+   RIDRE++C +   C L F  + E+ + ++ V V I DINDNAPRF
Sbjct: 74  LFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRF 133

Query: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
             + ++L+I E+  PG +  L +A DADV  N+L+ Y +NPN +FSL  +   DG+KYP 
Sbjct: 134 GVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPE 193

Query: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
           L+LE+ LDRE ++ H L+L A DGGDP LSGT+ I ++V DANDNAPVF+Q  YR+S+ E
Sbjct: 194 LVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPE 253

Query: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTS-LFNLNPNTGDITTNGTLDFEETS 309
           N   GT +L V ATD DEG  A++ Y    SP  TS +F L   +G++T    LD+E+ +
Sbjct: 254 NTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDAT 313

Query: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
            + + +EA+DG        V + ++D NDNAPE    S ++ + EDS  GT+I L  V D
Sbjct: 314 FHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHD 373

Query: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
           +DSGQN   TC   E++PFKLE +  NYY+LV   AL+REQ + YN+T+ A D G P+LS
Sbjct: 374 RDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLS 433

Query: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
           +   I L ++DINDNAP F + SY  ++ ENNP GAS+  V+A DPD   N  V+YS   
Sbjct: 434 TDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAE 493

Query: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
             ++   L SY+S++  +GV++A R+FD+EQLR  ++ + ARD G+P LS+NVSL + V 
Sbjct: 494 DTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVL 553

Query: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
           D NDNAP +LYPA   DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSYH+L+ASE
Sbjct: 554 DQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASE 613

Query: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
           PGLFS+GL TGEVRTARAL DRDA +Q L+VA++D GQPPLSAT TL +  AD + ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILA 673

Query: 670 DL-SDRPEPSDPQTELQFYLVVALALISVLFLLAVILAIALRLRR---SSSLDTEGCFQT 725
           DL S  P      ++L  YLVVA+A +S +FL  VI+ +A RLRR   S  L   G   T
Sbjct: 674 DLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSLT 733

Query: 726 GLCSKSGPGV 735
           G+ S    GV
Sbjct: 734 GMQSSHFVGV 743


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score =  660 bits (1702), Expect = 0.0
 Identities = 351/734 (47%), Positives = 483/734 (65%), Gaps = 10/734 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
           VL   LL +   A + QIRY++PEE   G  VG ++KDL L  REL  R++R+ +     
Sbjct: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73

Query: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
            F+++  SG L+  GRIDRE++C +   C + F+ + E+ + ++ + + + DIND+AP+F
Sbjct: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133

Query: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
            A+ ++++I E A+PG ++ L  A D DV  NSL+ Y ++PN +FSL+ +   +G+  P 
Sbjct: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193

Query: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
           L+LE+ LDRE  ++H L+LTA DGG+P  S T  I + V D NDNAPVF+Q +YRV + E
Sbjct: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253

Query: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDITTNGTLDFEETS 309
           NVP GT +L   A+D DEGIN ++ Y F       SL F LN NTG+I+T  +LD+EE S
Sbjct: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313

Query: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
            Y + ++A+DGG       V I + D NDN PEVT  S  + + ED+  GTVI L    D
Sbjct: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373

Query: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
           +DSG+NG V C  QE + F LE++ ++YY+L+ A  L+RE+ ++YN+T+ ATD+G P LS
Sbjct: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433

Query: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
           +   ITL ++DINDN P F QASY V++ ENN  G SI  V A DPD   N RV YS+  
Sbjct: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493

Query: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
             ++   L +YVS++  +GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553

Query: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
           D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613

Query: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
           PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673

Query: 670 DLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLC 728
           DL     P+D + ++L  YLVVA+A++S +FL  VI  +ALRLR   S         GL 
Sbjct: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLA 733

Query: 729 SKSGPGVPPNHSEG 742
                GVP +H  G
Sbjct: 734 -----GVPTSHFVG 742


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score =  660 bits (1702), Expect = 0.0
 Identities = 351/734 (47%), Positives = 483/734 (65%), Gaps = 10/734 (1%)

Query: 14  VLFPFLLSLFCGAISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
           VL   LL +   A + QIRY++PEE   G  VG ++KDL L  REL  R++R+ +     
Sbjct: 14  VLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRTQ 73

Query: 71  YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
            F+++  SG L+  GRIDRE++C +   C + F+ + E+ + ++ + + + DIND+AP+F
Sbjct: 74  LFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPKF 133

Query: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
            A+ ++++I E A+PG ++ L  A D DV  NSL+ Y ++PN +FSL+ +   +G+  P 
Sbjct: 134 QAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPE 193

Query: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
           L+LE+ LDRE  ++H L+LTA DGG+P  S T  I + V D NDNAPVF+Q +YRV + E
Sbjct: 194 LVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLE 253

Query: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLNSPISTSL-FNLNPNTGDITTNGTLDFEETS 309
           NVP GT +L   A+D DEGIN ++ Y F       SL F LN NTG+I+T  +LD+EE S
Sbjct: 254 NVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECS 313

Query: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
            Y + ++A+DGG       V I + D NDN PEVT  S  + + ED+  GTVI L    D
Sbjct: 314 FYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHD 373

Query: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
           +DSG+NG V C  QE + F LE++ ++YY+L+ A  L+RE+ ++YN+T+ ATD+G P LS
Sbjct: 374 RDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLS 433

Query: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
           +   ITL ++DINDN P F QASY V++ ENN  G SI  V A DPD   N RV YS+  
Sbjct: 434 TEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAE 493

Query: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
             ++   L +YVS++  +GV++A  +FD+EQ R  ++ + A D GSP LS+NVSLR+ V 
Sbjct: 494 DTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVL 553

Query: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
           D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY + +ASE
Sbjct: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASE 613

Query: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
           PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ ++L 
Sbjct: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILA 673

Query: 670 DLSDRPEPSDPQ-TELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLC 728
           DL     P+D + ++L  YLVVA+A++S +FL  VI  +ALRLR   S         GL 
Sbjct: 674 DLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLA 733

Query: 729 SKSGPGVPPNHSEG 742
                GVP +H  G
Sbjct: 734 -----GVPTSHFVG 742


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,132,462
Number of Sequences: 37866
Number of extensions: 1420069
Number of successful extensions: 10439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3063
Number of HSP's gapped (non-prelim): 709
length of query: 810
length of database: 18,247,518
effective HSP length: 110
effective length of query: 700
effective length of database: 14,082,258
effective search space: 9857580600
effective search space used: 9857580600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.