Guide to the Human Genome
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Name: BZRPL1 Sequence: fasta or formatted (170aa) NCBI GI: 229577236
Description:

benzodiazapine receptor (peripheral)-like 1

Referenced in:

Mitochondria

Other entries for this name:
alt mRNA [170aa] benzodiazapine receptor (peripheral)-like 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         11           2
 C cysteine            1.8          3           1
 D aspartate           2.4          4           1
 E glutamate           1.2          2           1
 F phenylalanine       2.9          5           2
 G glycine             7.1         12           3
 H histidine           4.1          7           1
 I isoleucine          3.5          6           1
 K lysine              2.4          4           1
 L leucine            22.9         39           4
 M methionine          1.8          3           1
 N asparagine          1.2          2           1
 P proline             7.1         12           1
 Q glutamine           2.9          5           1
 R arginine            2.4          4           1
 S serine              5.3          9           1
 T threonine           5.9         10           1
 V valine              8.8         15           2
 W tryptophan          5.3          9           1
 Y tyrosine            4.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   benzodiazapine receptor (peripheral)-like 1 
BZRPL1                1.000   benzodiazapine receptor (peripheral)-like 1 
TSPO                  0.270   translocator protein isoform PBR 
ZDHHC24               0.021   zinc finger, DHHC-type containing 24 
LTB4R2                0.015   leukotriene B4 receptor 2 
SLC35B4               0.015   solute carrier family 35, member B4 
GDPD2                 0.012   osteoblast differentiation promoting factor protein ...
SLC5A3                0.009   solute carrier family 5 (inositol transporters), me...
YIF1A                 0.009   Yip1 interacting factor homolog 
ADCY4                 0.009   adenylate cyclase 4 
SLC6A6                0.009   solute carrier family 6 (neurotransmitter transport...
SLC6A6                0.009   solute carrier family 6 (neurotransmitter transporte...
HTR1E                 0.009   5-hydroxytryptamine (serotonin) receptor 1E 
RTTN                  0.009   rotatin 
NOP14                 0.006   probable nucleolar complex protein 14 
TMEM110               0.006   transmembrane protein 110 
C20orf195             0.006   hypothetical protein LOC79025 
SLC11A1               0.006   natural resistance-associated macrophage protein 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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