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Search of human proteins with 14196477
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14196477 protocadherin gamma subfamily A, 7 isoform 2
precursor [Homo sapiens]
(817 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 1614 0.0
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 1598 0.0
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 1160 0.0
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 1160 0.0
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur... 1152 0.0
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur... 1151 0.0
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso... 1148 0.0
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs... 1147 0.0
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs... 1147 0.0
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs... 1146 0.0
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs... 1129 0.0
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs... 1128 0.0
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 1127 0.0
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 1127 0.0
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur... 1121 0.0
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs... 1120 0.0
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs... 1117 0.0
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs... 1117 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 1099 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 1097 0.0
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur... 1093 0.0
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur... 1093 0.0
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 1092 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 1091 0.0
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur... 822 0.0
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 674 0.0
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 674 0.0
gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precurs... 671 0.0
gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precurs... 671 0.0
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs... 671 0.0
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 1614 bits (4180), Expect = 0.0
Identities = 817/817 (100%), Positives = 817/817 (100%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA
Sbjct: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID
Sbjct: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSPALPLFP 817
SQESCEKNDSLLTSVDFQECKENLPSIQVSPALPLFP
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSPALPLFP 817
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1598 bits (4139), Expect = 0.0
Identities = 809/811 (99%), Positives = 810/811 (99%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA
Sbjct: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID
Sbjct: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL
Sbjct: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP
Sbjct: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE
Sbjct: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT
Sbjct: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI
Sbjct: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD
Sbjct: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP
Sbjct: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH
Sbjct: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI
Sbjct: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSP 811
SQESCEKNDSLLTSVDFQECKENLPSIQ +P
Sbjct: 781 SQESCEKNDSLLTSVDFQECKENLPSIQQAP 811
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 1160 bits (3002), Expect = 0.0
Identities = 596/796 (74%), Positives = 676/796 (84%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ VKI+EN AP RFPL E DPDVG NSLQ ++LS N HFS+ VQS KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VLE LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
+PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST LDYE+++F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
YE+ V+A+DGPG +AKVLIT+LDVNDN PEV +TS S +I E P GTVIALF + DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG VTC+IP +LPF+LEKS+ NYYRLVT LDRE + LYNIT+ ATD GTPPLS
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
Query: 795 VDFQECKENLPSIQVS 810
D E K +QVS
Sbjct: 795 QDLLETKGEPRQLQVS 810
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1160 bits (3000), Expect = 0.0
Identities = 595/797 (74%), Positives = 676/797 (84%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL LLGT W A A +I YS+ EE +KGSFVG+I KDLGLEP+ELAE GVRI+SRGR QL
Sbjct: 15 LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+LN R+GSLVTAGRIDREE+CAQS RCLV+FNIL+EDK+NLYP++VEI+DINDN PRFL
Sbjct: 75 FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ VKI+EN AP RFPL E DPDVG NSLQ ++LS N HFS+ VQS KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VLE LDRE E V+ LVLTA DGGDP RSS A I VTV+DVND+TP+F+ P Y+V+VPEN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
+PVGT +L V A D DEGV+GEVTYSF KIT K+ ++F LN LTGEIST LDYE+++F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
YE+ V+A+DGPG +AKVLIT+LDVNDN PEV +TS S +I E P GTVIALF + DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG VTC+IP +LPF+LEKS+ NYYRLVT LDRE + LYNIT+ ATD GTPPLS
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ET I + VADTNDNPPTFPHSSYSVY+ ENNPRGASIF V A D D + NAQ++YSLAED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
T+QGAP+SSYVSINSDTG+LYAL+SFDYEQLR+LQL VTA DSGDPPLSSN+SLSLFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRL+RWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG++GV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI+QES EK++ LL +
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794
Query: 795 VDFQECKENLPSIQVSP 811
D E K +Q +P
Sbjct: 795 QDLLETKGEPRQLQQAP 811
>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
[Homo sapiens]
Length = 850
Score = 1152 bits (2979), Expect = 0.0
Identities = 591/802 (73%), Positives = 663/802 (82%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
D G LL + G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P+F E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS +
Sbjct: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
KYPELVLE LDREEE +HHLVLTASDGGDP RS T + VTV D ND+ PVF+LP+Y+
Sbjct: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+ F LN TGEI E LD
Sbjct: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
YEET FYE+E+QA+DG L AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D DS +NG+VTC+I LPFKLEKSID+YYRLV + LDRE +S YNIT+ ATDGG
Sbjct: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
+PPLS E H +QVAD NDNPPTF SY YI ENN RGASIF VTA D DS++NAQI
Sbjct: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ ELQ++VTA DSGDPPLSSN+SL
Sbjct: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGS E DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL V SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
Query: 789 DSLLTSVDFQECKENLPSIQVS 810
D L D + E+ P + VS
Sbjct: 793 DPLSLLDDSKFPIEDTPLVPVS 814
>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
[Homo sapiens]
Length = 936
Score = 1151 bits (2977), Expect = 0.0
Identities = 590/803 (73%), Positives = 663/803 (82%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
D G LL + G PWEA A +I YS+ EE +KGSFVG+I+KDLGL PRELAERGVRI+S
Sbjct: 13 DCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVS 72
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLF+LN RSGSL+TAGRIDREE+CAQSARC+V+FNIL+ED++ L+ I++E+ DIND
Sbjct: 73 RGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIND 132
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P+F E ++VKI EN A G+RFPL EA DPDVG NSLQSYQLSPN+HFSL VQS +
Sbjct: 133 NAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANG 192
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
KYPELVLE LDREEE +HHLVLTASDGGDP RS T + VTV D ND+ PVF+LP+Y+
Sbjct: 193 VKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYR 252
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
V+VPEN+PVGT+LLTV A D DEG NGEVTYSFRK+ F LN TGEI E LD
Sbjct: 253 VSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLD 312
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
YEET FYE+E+QA+DG L AKVLITV DVNDN+PE+T+TSL S + ED+PLGTV+AL
Sbjct: 313 YEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVAL 372
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D DS +NG+VTC+I LPFKLEKSID+YYRLV + LDRE +S YNIT+ ATDGG
Sbjct: 373 LNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGG 432
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
+PPLS E H +QVAD NDNPPTF SY YI ENN RGASIF VTA D DS++NAQI
Sbjct: 433 SPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQII 492
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAEDTIQG P+SSY+SINSDTGVLYAL+SFDYEQ ELQ++VTA DSGDPPLSSN+SL
Sbjct: 493 YSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSL 552
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 553 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 612
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 613 LKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 672
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGS E DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWHKSRLLQAS
Sbjct: 673 PQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQAS 732
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL V SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEKN
Sbjct: 733 GGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKN 792
Query: 789 DSLLTSVDFQECKENLPSIQVSP 811
D L D + E+ P + +P
Sbjct: 793 DPLSLLDDSKFPIEDTPLVPQAP 815
>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1148 bits (2969), Expect = 0.0
Identities = 594/813 (73%), Positives = 666/813 (81%), Gaps = 3/813 (0%)
Query: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
++PR G+ LL LLGT WE G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+
Sbjct: 6 SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
Query: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK L+ +++E
Sbjct: 63 GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
Query: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
IIDINDN P+F E++ VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
Query: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Q+GD+ PELVLER LDREEE HHLVLTASDGG PPRSST I VTV+D ND+ PVF
Sbjct: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
Query: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI K +F LN TGEIS
Sbjct: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
Query: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
+ LDYEE +FYEME+QA+D L + K+LI+V DVNDN PEV +TSL S + E++
Sbjct: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
Query: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
GTVIA + D+DSGKNG+V C +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
Query: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
Query: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
+NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
Query: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
Query: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
AVADSIPEVL +LGSL+PS P + LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
Query: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782
RLLQ S G L VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
Query: 783 ESCEKNDSLLTSVDFQECKENLPSIQVSPALPL 815
E CEKNDSLLTSVDF E K QVS L L
Sbjct: 783 EGCEKNDSLLTSVDFHEYKNEADHGQVSLVLCL 815
>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
[Homo sapiens]
Length = 829
Score = 1147 bits (2968), Expect = 0.0
Identities = 580/800 (72%), Positives = 676/800 (84%)
Query: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
RG LL LLGT E +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
Query: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
RTQLF+LN +SGSLVTA RIDREE+CAQ CLV NIL+EDK+ ++ +++EI DINDN
Sbjct: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
Query: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
P F TEE+ +KI E T PG RFP+ A DPDVG NSLQ+Y+LSPN +FSLAV S + K
Sbjct: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
Query: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
YPELVLER LDRE++ +H LVL ASDGGDP S HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
Query: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
V ENVPVGTRLLTV+A D DEG N +V+Y K+ K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
Query: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
+ FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+ +G IAL
Sbjct: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
Query: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
+ DRDSG+NG+V + NLPFKLEKSID YYRLVT +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
Query: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
Query: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
Query: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
+LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
Query: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790
GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++
Sbjct: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
Query: 791 LLTSVDFQECKENLPSIQVS 810
LL + D E K + +QVS
Sbjct: 791 LLITQDLLEMKGDSNLLQVS 810
>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1147 bits (2966), Expect = 0.0
Identities = 579/801 (72%), Positives = 676/801 (84%)
Query: 11 RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70
RG LL LLGT E +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11 RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
Query: 71 RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130
RTQLF+LN +SGSLVTA RIDREE+CAQ CLV NIL+EDK+ ++ +++EI DINDN
Sbjct: 71 RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
Query: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190
P F TEE+ +KI E T PG RFP+ A DPDVG NSLQ+Y+LSPN +FSLAV S + K
Sbjct: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
Query: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250
YPELVLER LDRE++ +H LVL ASDGGDP S HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
Query: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310
V ENVPVGTRLLTV+A D DEG N +V+Y K+ K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
Query: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370
+ FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+ +G IAL
Sbjct: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
Query: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430
+ DRDSG+NG+V + NLPFKLEKSID YYRLVT +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
Query: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490
PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
Query: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550
L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
Query: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610
FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
Query: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670
ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
Query: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730
+LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
Query: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790
GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++
Sbjct: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
Query: 791 LLTSVDFQECKENLPSIQVSP 811
LL + D E K + +Q +P
Sbjct: 791 LLITQDLLEMKGDSNLLQQAP 811
>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1146 bits (2965), Expect = 0.0
Identities = 591/809 (73%), Positives = 664/809 (82%), Gaps = 3/809 (0%)
Query: 3 AQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAER 62
++PR G+ LL LLGT WE G+I YSV EETDKGSFVG+I+KDLGL+PR+LA+
Sbjct: 6 SRPRRGE---LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKH 62
Query: 63 GVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVE 122
GVRI+SRGRTQLFALN RSGSL+TAGRIDREE+CAQS RCL+N N L+EDK L+ +++E
Sbjct: 63 GVRIVSRGRTQLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIE 122
Query: 123 IIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAV 182
IIDINDN P+F E++ VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL V
Sbjct: 123 IIDINDNNPKFQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDV 182
Query: 183 QSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVF 242
Q+GD+ PELVLER LDREEE HHLVLTASDGG PPRSST I VTV+D ND+ PVF
Sbjct: 183 QTGDNGAINPELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVF 242
Query: 243 SLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEIS 302
P Y+V V EN+P GTRLLTV A D DEG+NG+V Y FRKI K +F LN TGEIS
Sbjct: 243 PHPIYRVKVLENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEIS 302
Query: 303 TLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPL 362
+ LDYEE +FYEME+QA+D L + K+LI+V DVNDN PEV +TSL S + E++
Sbjct: 303 IAKSLDYEECSFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLP 362
Query: 363 GTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITL 422
GTVIA + D+DSGKNG+V C +NLPFKLEKSI NYYRLVT K LDRE +S+YNIT+
Sbjct: 363 GTVIAFLSVHDQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITV 422
Query: 423 KATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSE 482
A+D GTPPLS ET I + VAD NDNPPTFPH+SYS YI ENN RGASIF +TA D DS+
Sbjct: 423 MASDLGTPPLSTETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQ 482
Query: 483 DNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPL 542
+NAQ+TYS+ EDT+QGAP+SSY+SINSDTGVLYALQSFDYEQ+R+LQL VTA DSGDPPL
Sbjct: 483 ENAQVTYSVTEDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPL 542
Query: 543 SSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNA 602
SSNMSLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAE GYLVTKVVAVD+DSGQNA
Sbjct: 543 SSNMSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNA 602
Query: 603 WLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
WLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV
Sbjct: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
Query: 663 AVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKS 722
AVADSIPEVL +LGSL+PS P + LTLYLVVAVA +SCVFLAFV VLL LRLRRWHKS
Sbjct: 663 AVADSIPEVLTELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKS 722
Query: 723 RLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQ 782
RLLQ S G L VP SHFVG++ VQAFLQTYS EVSLTADSRKSHLIFPQPNY DMLISQ
Sbjct: 723 RLLQDSGGRLVGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQ 782
Query: 783 ESCEKNDSLLTSVDFQECKENLPSIQVSP 811
E CEKNDSLLTSVDF E K Q +P
Sbjct: 783 EGCEKNDSLLTSVDFHEYKNEADHGQQAP 811
>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1129 bits (2919), Expect = 0.0
Identities = 579/810 (71%), Positives = 666/810 (82%), Gaps = 1/810 (0%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA P D+ + +LLG E A +ILYSV EE ++GS VG+IAKDLGL PRELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSG+LVTAGRIDREE+C +S C+ N IL+ED + + ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIID+NDN P F TE+ +K+ EN PG RFPL EA DPDVG NSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
VQSG D KYPELVLER LDREEE VHHLVLTA DGGDP RS TA I + +VD ND+ P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y V+V ENVPVGTRLLTV A D DEG NG+VTYSFRK+ K+ ++F LNSL+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
I+ L GLDYE++ FY+++V+A DGPG ++KVL+TVLD NDNAPEVT+TSL+SS+ E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG NG VTC+IP+NLPF LEK+ NYYRL+T + LDRE +S YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
T+ ATD GTPPLS ETHI +QV D NDNPPTFPH+SYS YI ENNPRGASI +TAQD D
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA+ITYSLAEDT QGAP+SSYVSINS+TG+LYAL SFDYEQ R+LQL +TA DSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYP PTDGSTG+ELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLFAVGL+TGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIP+VLADLGSL+PS P + LTLYLVVAVA VSCVFLAFV VLLAL+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLL A LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIF QP+Y D LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVS 810
S+ESCEK++ LL + D E K + P++QVS
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD-PNLQVS 809
>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1128 bits (2917), Expect = 0.0
Identities = 578/811 (71%), Positives = 666/811 (82%), Gaps = 1/811 (0%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA P D+ + +LLG E A +ILYSV EE ++GS VG+IAKDLGL PRELA
Sbjct: 1 MAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSG+LVTAGRIDREE+C +S C+ N IL+ED + + ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIID+NDN P F TE+ +K+ EN PG RFPL EA DPDVG NSLQ YQL+ N +FSL
Sbjct: 121 VEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
VQSG D KYPELVLER LDREEE VHHLVLTA DGGDP RS TA I + +VD ND+ P
Sbjct: 181 DVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y V+V ENVPVGTRLLTV A D DEG NG+VTYSFRK+ K+ ++F LNSL+G+
Sbjct: 241 VFTQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGD 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
I+ L GLDYE++ FY+++V+A DGPG ++KVL+TVLD NDNAPEVT+TSL+SS+ E +
Sbjct: 301 ITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG NG VTC+IP+NLPF LEK+ NYYRL+T + LDRE +S YNI
Sbjct: 361 SPGTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
T+ ATD GTPPLS ETHI +QV D NDNPPTFPH+SYS YI ENNPRGASI +TAQD D
Sbjct: 421 TVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA+ITYSLAEDT QGAP+SSYVSINS+TG+LYAL SFDYEQ R+LQL +TA DSGDP
Sbjct: 481 SGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYP PTDGSTG+ELAPRSA+ GYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLK+SEPGLFAVGL+TGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTL
Sbjct: 601 NAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVADSIP+VLADLGSL+PS P + LTLYLVVAVA VSCVFLAFV VLLAL+LRRWH
Sbjct: 661 TVAVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLL A LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIF QP+Y D LI
Sbjct: 721 KSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLI 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSP 811
S+ESCEK++ LL + D E K + P++Q +P
Sbjct: 781 SRESCEKSEPLLITQDLLETKGD-PNLQQAP 810
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1127 bits (2916), Expect = 0.0
Identities = 583/811 (71%), Positives = 662/811 (81%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MA+ PRG L +LLGT E +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS C+VNFNIL+E+KM +Y ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDN PRF EE+ VK+ EN A G R L A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V SG D KYPELVLE+ LDRE+E VH L+LTA DGGDP S T HI+VTV+D ND+ P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
+F+ +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR K+ + F L+S GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTL+ LDYEE+ FY MEV AQDG + AKV++TV DVNDNAPEV +TSL+SSI ED
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL D GTPPLS E+HI ++VAD NDNPP FP +SYS + ENNPRG SIF VTA D D
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGS++ P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQA LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVSP 811
S+ESCEK++ LL S KE Q P
Sbjct: 781 SEESCEKSEPLLMSDKVDANKEERRVQQAPP 811
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 1127 bits (2915), Expect = 0.0
Identities = 583/810 (71%), Positives = 665/810 (82%), Gaps = 1/810 (0%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MA+ PRG L +LLGT E +G+I YS+ EE DKGSFVG+IAKDLGLEP+ELA
Sbjct: 1 MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
ERGVRI+SRGRTQLFALN RSGSLVTAGRIDREE+CAQS C+VNFNIL+E+KM +Y ++
Sbjct: 61 ERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEIIDINDN PRF EE+ VK+ EN A G R L A D DVG NSL+SYQLS N HFSL
Sbjct: 121 VEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V SG D KYPELVLE+ LDRE+E VH L+LTA DGGDP S T HI+VTV+D ND+ P
Sbjct: 181 DVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
+F+ +Y V+VPEN+PVGTRLL + A D DEG+NG++TYSFR K+ + F L+S GE
Sbjct: 241 LFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
ISTL+ LDYEE+ FY MEV AQDG + AKV++TV DVNDNAPEV +TSL+SSI ED
Sbjct: 301 ISTLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDC 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GTVIALF + D DSG+NGE+ C+IP NLPFKLEKS+DNYY L+TT++LDRE S YNI
Sbjct: 361 LPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL D GTPPLS E+HI ++VAD NDNPP FP +SYS + ENNPRG SIF VTA D D
Sbjct: 421 TLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA++TYSLAEDT QGAP+SSYVSINSDTGVLYAL+SFDYEQLR+LQL VTA DSG+P
Sbjct: 481 SGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLFAVGL+TGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+
Sbjct: 601 NAWLSYRLLKASEPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTV 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGS++ P + DLTLYLVVAVA VSCVFLAFV+VLL LRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQA LA VP SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D L+
Sbjct: 721 KSRLLQAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLL 780
Query: 781 SQESCEKNDSLLTSVDFQECKENLPSIQVS 810
S+ESCEK++ LL S D + + +QVS
Sbjct: 781 SEESCEKSEPLLMS-DKVDANKEERRVQVS 809
>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 1121 bits (2900), Expect = 0.0
Identities = 574/802 (71%), Positives = 657/802 (81%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
DY+G LL ILLGT WE +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII
Sbjct: 9 DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLFALN RSGSLVTAGRIDREE+C + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69 RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P F E+ +KI EN A +RFPL A DPD+G NSLQSY+LSPN HFSL VQ+G D
Sbjct: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
+KYPELVL+R LDREE+ HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
+VPEN+ +GT+LL V+A D DEGVN EV YSFR + K ++F L+ +G IST+ LD
Sbjct: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
+EE+ FY+MEVQA D G +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D+DS +NG+V C I NLPFKLEKS NYY LVT LDRE + YNIT+ ATD G
Sbjct: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+ VTA D D E+NAQIT
Sbjct: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGSLE DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
Query: 789 DSLLTSVDFQECKENLPSIQVS 810
+ LL S D K++ I+VS
Sbjct: 789 EPLLLSGDSVFSKDSHGLIEVS 810
>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1120 bits (2898), Expect = 0.0
Identities = 573/803 (71%), Positives = 657/803 (81%)
Query: 9 DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68
DY+G LL ILLGT WE +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII
Sbjct: 9 DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
Query: 69 RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128
RGRTQLFALN RSGSLVTAGRIDREE+C + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69 RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
Query: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188
N P F E+ +KI EN A +RFPL A DPD+G NSLQSY+LSPN HFSL VQ+G D
Sbjct: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
Query: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248
+KYPELVL+R LDREE+ HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
Query: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308
+VPEN+ +GT+LL V+A D DEGVN EV YSFR + K ++F L+ +G IST+ LD
Sbjct: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
Query: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368
+EE+ FY+MEVQA D G +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
Query: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428
+ D+DS +NG+V C I NLPFKLEKS NYY LVT LDRE + YNIT+ ATD G
Sbjct: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
Query: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488
TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+ VTA D D E+NAQIT
Sbjct: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
Query: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548
YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
Query: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608
SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
Query: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728
P+VLADLGSLE DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
Query: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788
GGL P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
Query: 789 DSLLTSVDFQECKENLPSIQVSP 811
+ LL S D K++ I+ +P
Sbjct: 789 EPLLLSGDSVFSKDSHGLIEQAP 811
>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1117 bits (2890), Expect = 0.0
Identities = 565/791 (71%), Positives = 649/791 (82%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA + R LL LL T WEA AG+I YSV EE D+GSFVG+IAKDLGLEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
E+GVRI+SRGR+QLFALN RSGSLVTA RIDREE+CAQSA CL+NFNIL+EDK+ +Y ++
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEI DINDN PRF EE+ +KI E T PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V+ G D KYPELVLER LDREEE VHHLVL ASDGGDP S T+ I V V+D ND+ P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y++++PEN VGTR+LTV A D DEG +V Y K + ++F L S +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
++ ++ LDYE+ F+E++++AQDGPG LT+AKV++TVLDVNDNAPE MTS +SS+ ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GT+I LF + DRDSG+N TC++PE+LPFKLEKS+DNYYRLVTT+ LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL A DGG P LS + HI +QVAD NDN P F +SYS YI ENNPRGAS+F VTA D D
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA +TYS AEDT+QGAP+SSY+SINSDTGVLYAL+SFDYEQLR+LQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPA PTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQAS G L + +SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKNDSL 791
SQESCEK D L
Sbjct: 781 SQESCEKKDFL 791
>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1117 bits (2890), Expect = 0.0
Identities = 565/791 (71%), Positives = 649/791 (82%)
Query: 1 MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELA 60
MAA + R LL LL T WEA AG+I YSV EE D+GSFVG+IAKDLGLEP LA
Sbjct: 1 MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALA 60
Query: 61 ERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPID 120
E+GVRI+SRGR+QLFALN RSGSLVTA RIDREE+CAQSA CL+NFNIL+EDK+ +Y ++
Sbjct: 61 EQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVE 120
Query: 121 VEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSL 180
VEI DINDN PRF EE+ +KI E T PG R PL A D DVG N+LQ Y L+PN HFSL
Sbjct: 121 VEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSL 180
Query: 181 AVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTP 240
V+ G D KYPELVLER LDREEE VHHLVL ASDGGDP S T+ I V V+D ND+ P
Sbjct: 181 DVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAP 240
Query: 241 VFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGE 300
VF+ P+Y++++PEN VGTR+LTV A D DEG +V Y K + ++F L S +GE
Sbjct: 241 VFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
Query: 301 ISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDT 360
++ ++ LDYE+ F+E++++AQDGPG LT+AKV++TVLDVNDNAPE MTS +SS+ ED+
Sbjct: 301 LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDS 360
Query: 361 PLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNI 420
GT+I LF + DRDSG+N TC++PE+LPFKLEKS+DNYYRLVTT+ LDRE S YNI
Sbjct: 361 LPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI 420
Query: 421 TLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHD 480
TL A DGG P LS + HI +QVAD NDN P F +SYS YI ENNPRGAS+F VTA D D
Sbjct: 421 TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPD 480
Query: 481 SEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDP 540
S DNA +TYS AEDT+QGAP+SSY+SINSDTGVLYAL+SFDYEQLR+LQ+ V A DSG+P
Sbjct: 481 SNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNP 540
Query: 541 PLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQ 600
PLSSN+SLSLFVLDQNDN PEILYPA PTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
Query: 601 NAWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
NAWLSY LLKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTL
Sbjct: 601 NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTL 660
Query: 661 TVAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWH 720
TVAVAD IP++LADLGSLEPS P + DLTLYLVVAVA VSCVFLAFV+VLLA RLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 721 KSRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLI 780
KSRLLQAS G L + +SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LI
Sbjct: 721 KSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
Query: 781 SQESCEKNDSL 791
SQESCEK D L
Sbjct: 781 SQESCEKKDFL 791
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 1099 bits (2842), Expect = 0.0
Identities = 568/797 (71%), Positives = 643/797 (80%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL + L EA AG I YSV EETDKGSFVG+IAKDLGL+P+ELA+ GVRI+SRGR L
Sbjct: 15 LLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
FALN RSGSL+TA RIDREE+CAQS CLV+FNIL+EDKM L+P++VEIIDINDN P+F
Sbjct: 75 FALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQ 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ K+ E T PG R L D DVG NSLQSYQLS N HFSL VQ G D ++PE+
Sbjct: 135 LEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEM 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VL+ LDREEE VHHL+LTASDGG+P RS T I + VVD ND+ P F+ QY + VPEN
Sbjct: 195 VLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
VP+GT+LL V+A D DEG NGEVTYSF + ++ ++F L+S TGEIS E LD+EE
Sbjct: 255 VPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKM 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y MEVQAQDG G + K KVLI VLDVNDNAPEVT+TS+++++PE+ P GT+IAL + D+
Sbjct: 315 YSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQ 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG TC IP NLPFKLEK +DNYYRLVT + LDRE +S YNIT+ A D GTP LS
Sbjct: 375 DSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ETHI + V D NDN P F SYS YI ENNPRGASIF V A D DS +NAQITYSL ED
Sbjct: 435 ETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
TIQGAP+S+Y+SINSDTGVLYAL+SFDYEQ R++QL+V A DSGDPPLSSN+SLSLF+LD
Sbjct: 495 TIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAP SAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVA A VSCVFLAFV+VLLA RLRRWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK L
Sbjct: 735 MPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAP 794
Query: 795 VDFQECKENLPSIQVSP 811
E K+ S Q P
Sbjct: 795 QSLLEDKKEPFSQQAPP 811
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 1097 bits (2838), Expect = 0.0
Identities = 568/796 (71%), Positives = 644/796 (80%), Gaps = 1/796 (0%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
LL + L EA AG I YSV EETDKGSFVG+IAKDLGL+P+ELA+ GVRI+SRGR L
Sbjct: 15 LLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPL 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
FALN RSGSL+TA RIDREE+CAQS CLV+FNIL+EDKM L+P++VEIIDINDN P+F
Sbjct: 75 FALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQ 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
EE+ K+ E T PG R L D DVG NSLQSYQLS N HFSL VQ G D ++PE+
Sbjct: 135 LEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEM 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
VL+ LDREEE VHHL+LTASDGG+P RS T I + VVD ND+ P F+ QY + VPEN
Sbjct: 195 VLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
VP+GT+LL V+A D DEG NGEVTYSF + ++ ++F L+S TGEIS E LD+EE
Sbjct: 255 VPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKM 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y MEVQAQDG G + K KVLI VLDVNDNAPEVT+TS+++++PE+ P GT+IAL + D+
Sbjct: 315 YSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQ 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
DSG NG TC IP NLPFKLEK +DNYYRLVT + LDRE +S YNIT+ A D GTP LS
Sbjct: 375 DSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALST 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
ETHI + V D NDN P F SYS YI ENNPRGASIF V A D DS +NAQITYSL ED
Sbjct: 435 ETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIED 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
TIQGAP+S+Y+SINSDTGVLYAL+SFDYEQ R++QL+V A DSGDPPLSSN+SLSLF+LD
Sbjct: 495 TIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
QNDN PEILYPALPTDGSTG+ELAP SAEPGYLVTKVVAVD+DSGQNAWLSY LLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I ++LAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILAD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLAN 734
LGSLEPS P + DLTLYLVVA A VSCVFLAFV+VLLA RLRRWHKSRLLQAS GGLA+
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLAS 734
Query: 735 VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTS 794
+P SHFVG+DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK L
Sbjct: 735 MPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAP 794
Query: 795 VDFQECKENLPSIQVS 810
E K+ P QV+
Sbjct: 795 QSLLEDKKE-PFSQVN 809
>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
[Homo sapiens]
Length = 837
Score = 1093 bits (2827), Expect = 0.0
Identities = 556/791 (70%), Positives = 645/791 (81%)
Query: 6 RGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVR 65
RG R LL I LGT A +I YSV EET+KGSFVG+I+KDLGLEPRELA+RGVR
Sbjct: 7 RGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66
Query: 66 IISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIID 125
I+SRG+TQLFA+N RSGSL+TAGRIDREE+C + C +N +L+ED + +Y ++VEIID
Sbjct: 67 IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126
Query: 126 INDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSG 185
INDN P F +E+ +K+ E+ PG RF L A DPDVG NSLQSYQLSPN +FSL ++
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186
Query: 186 DDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLP 245
D K PELVLE LDRE+E H L+LTA DGGDP R I+V V+DVNDH P+F+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246
Query: 246 QYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLE 305
Y+V+VPEN+ GTR+L V+A D DEG+NGEV YSFR + K ++F L+S TGE+
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306
Query: 306 GLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTV 365
LD+E+ FYEME+Q QDG G T +LITV+DVNDNAPE+T+TS +SI E++P GTV
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366
Query: 366 IALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKAT 425
IAL +QD+DSG+NG+V+C IP +LPFKLEK+ NYY+L+T++ LDRE + YNITL AT
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426
Query: 426 DGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNA 485
D G+PPLS ETH+++ VAD NDNPP FPHSSYS YI ENNPRGASIF VTA D DS+ NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486
Query: 486 QITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSN 545
+TYSL +DT+QG P+SSYVSINS+TGVLYALQSFDYEQ R+L+LRV A DSGDPPLSSN
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546
Query: 546 MSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 605
+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606
Query: 606 YLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 665
Y LLKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666
Query: 666 DSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLL 725
DSIPEVLADLGSLE DL+LYLVVAVA VSC+FL FV+VLLALRL RWHKSRLL
Sbjct: 667 DSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLL 726
Query: 726 QASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESC 785
QASEGGLA +PTSHFVG+DGVQAFLQTYSHEVSL ADS+KSHLIFPQPNY D LISQESC
Sbjct: 727 QASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESC 786
Query: 786 EKNDSLLTSVD 796
EK++ LL + D
Sbjct: 787 EKSEPLLIAED 797
>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
[Homo sapiens]
Length = 935
Score = 1093 bits (2827), Expect = 0.0
Identities = 556/791 (70%), Positives = 645/791 (81%)
Query: 6 RGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVR 65
RG R LL I LGT A +I YSV EET+KGSFVG+I+KDLGLEPRELA+RGVR
Sbjct: 7 RGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66
Query: 66 IISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIID 125
I+SRG+TQLFA+N RSGSL+TAGRIDREE+C + C +N +L+ED + +Y ++VEIID
Sbjct: 67 IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126
Query: 126 INDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSG 185
INDN P F +E+ +K+ E+ PG RF L A DPDVG NSLQSYQLSPN +FSL ++
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186
Query: 186 DDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLP 245
D K PELVLE LDRE+E H L+LTA DGGDP R I+V V+DVNDH P+F+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246
Query: 246 QYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLE 305
Y+V+VPEN+ GTR+L V+A D DEG+NGEV YSFR + K ++F L+S TGE+
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306
Query: 306 GLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTV 365
LD+E+ FYEME+Q QDG G T +LITV+DVNDNAPE+T+TS +SI E++P GTV
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366
Query: 366 IALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKAT 425
IAL +QD+DSG+NG+V+C IP +LPFKLEK+ NYY+L+T++ LDRE + YNITL AT
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426
Query: 426 DGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNA 485
D G+PPLS ETH+++ VAD NDNPP FPHSSYS YI ENNPRGASIF VTA D DS+ NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486
Query: 486 QITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSN 545
+TYSL +DT+QG P+SSYVSINS+TGVLYALQSFDYEQ R+L+LRV A DSGDPPLSSN
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546
Query: 546 MSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 605
+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606
Query: 606 YLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 665
Y LLKASEPGLFAVG +TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA
Sbjct: 607 YRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA 666
Query: 666 DSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLL 725
DSIPEVLADLGSLE DL+LYLVVAVA VSC+FL FV+VLLALRL RWHKSRLL
Sbjct: 667 DSIPEVLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLL 726
Query: 726 QASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESC 785
QASEGGLA +PTSHFVG+DGVQAFLQTYSHEVSL ADS+KSHLIFPQPNY D LISQESC
Sbjct: 727 QASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESC 786
Query: 786 EKNDSLLTSVD 796
EK++ LL + D
Sbjct: 787 EKSEPLLIAED 797
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 1092 bits (2823), Expect = 0.0
Identities = 568/809 (70%), Positives = 643/809 (79%), Gaps = 1/809 (0%)
Query: 3 AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61
A P RG LL LLG WEA A +I YSV EET+KG VG+I+KDL LEPRELAE
Sbjct: 2 AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
Query: 62 RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121
R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62 RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
Query: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181
E+ DIND+ P+F E + VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL
Sbjct: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
Query: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241
VQ+GD+ PELVLER LDREE HHLVLTASDGG+P RSST I VTV+D ND+ PV
Sbjct: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
Query: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301
F+ Y+V V ENVP GT LLT A DLDEG+NG+V Y F KI K +F LN TGEI
Sbjct: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
Query: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361
ST + LDYEE +FYEME+QA+DG G KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
Query: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421
GTVI LF DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE S YNIT
Sbjct: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
Query: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481
+ ATD GTPPLS E HI +QV D NDNPP F +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
Query: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541
+N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
Query: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601
LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
Query: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
Query: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721
VA+ADSIP++LADLGSL+ DLTLYLVVAVA VSCVFL FV+ LLALRLR WH
Sbjct: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
Query: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781
S LL+A+ GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
Query: 782 QESCEKNDSLLTSVDFQECKENLPSIQVS 810
Q+SCEKN+ L SVD + E+ P + VS
Sbjct: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPVS 810
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 1091 bits (2821), Expect = 0.0
Identities = 567/810 (70%), Positives = 643/810 (79%), Gaps = 1/810 (0%)
Query: 3 AQPRGGDYRG-FFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAE 61
A P RG LL LLG WEA A +I YSV EET+KG VG+I+KDL LEPRELAE
Sbjct: 2 AAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAE 61
Query: 62 RGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDV 121
R VRI+SRGRTQLF+LN RSG+LVTAGRIDREE+CAQS RCLVNF +L+ED++ LY I++
Sbjct: 62 RRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEI 121
Query: 122 EIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLA 181
E+ DIND+ P+F E + VKI E PG R+PL EA DPDVG NSLQSYQLSPN HFSL
Sbjct: 122 EVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLN 181
Query: 182 VQSGDDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPV 241
VQ+GD+ PELVLER LDREE HHLVLTASDGG+P RSST I VTV+D ND+ PV
Sbjct: 182 VQTGDNGAINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPV 241
Query: 242 FSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEI 301
F+ Y+V V ENVP GT LLT A DLDEG+NG+V Y F KI K +F LN TGEI
Sbjct: 242 FAQRIYRVKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEI 301
Query: 302 STLEGLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTP 361
ST + LDYEE +FYEME+QA+DG G KVLI+V DVNDN PEVT+TSL S + ED P
Sbjct: 302 STAKSLDYEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAP 361
Query: 362 LGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNIT 421
GTVI LF DRDSGKNG+V C+I ENL F LE S ++YYRL+T + LDRE S YNIT
Sbjct: 362 QGTVILLFNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNIT 421
Query: 422 LKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDS 481
+ ATD GTPPLS E HI +QV D NDNPP F +SYSVY+ ENN RG SIF V A D DS
Sbjct: 422 VTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDS 481
Query: 482 EDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPP 541
+N+++ YSLAEDTIQG+P+S+YVSINSDTGVLYAL SFDYEQ R+LQ++VTA DSG PP
Sbjct: 482 NENSRVIYSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPP 541
Query: 542 LSSNMSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQN 601
LSSN+SL LFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQN
Sbjct: 542 LSSNVSLRLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQN 601
Query: 602 AWLSYLLLKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
AWLSY L KASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT
Sbjct: 602 AWLSYRLFKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLT 661
Query: 662 VAVADSIPEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHK 721
VA+ADSIP++LADLGSL+ DLTLYLVVAVA VSCVFL FV+ LLALRLR WH
Sbjct: 662 VAIADSIPDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHS 721
Query: 722 SRLLQASEGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLIS 781
S LL+A+ GLA VPTSHFVG+DGV+AFLQTYS E SLTADSRKSHLIFPQPNY D LIS
Sbjct: 722 SHLLRATSDGLAGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLIS 781
Query: 782 QESCEKNDSLLTSVDFQECKENLPSIQVSP 811
Q+SCEKN+ L SVD + E+ P + +P
Sbjct: 782 QQSCEKNEPLCVSVDSKFPIEDTPLVPQAP 811
>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
[Homo sapiens]
Length = 750
Score = 822 bits (2122), Expect = 0.0
Identities = 412/620 (66%), Positives = 492/620 (79%)
Query: 6 RGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVR 65
RG R LL I LGT A +I YSV EET+KGSFVG+I+KDLGLEPRELA+RGVR
Sbjct: 7 RGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVR 66
Query: 66 IISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIID 125
I+SRG+TQLFA+N RSGSL+TAGRIDREE+C + C +N +L+ED + +Y ++VEIID
Sbjct: 67 IVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIID 126
Query: 126 INDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSG 185
INDN P F +E+ +K+ E+ PG RF L A DPDVG NSLQSYQLSPN +FSL ++
Sbjct: 127 INDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGR 186
Query: 186 DDETKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLP 245
D K PELVLE LDRE+E H L+LTA DGGDP R I+V V+DVNDH P+F+
Sbjct: 187 TDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQS 246
Query: 246 QYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLE 305
Y+V+VPEN+ GTR+L V+A D DEG+NGEV YSFR + K ++F L+S TGE+
Sbjct: 247 VYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRG 306
Query: 306 GLDYEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTV 365
LD+E+ FYEME+Q QDG G T +LITV+DVNDNAPE+T+TS +SI E++P GTV
Sbjct: 307 SLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTV 366
Query: 366 IALFYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKAT 425
IAL +QD+DSG+NG+V+C IP +LPFKLEK+ NYY+L+T++ LDRE + YNITL AT
Sbjct: 367 IALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTAT 426
Query: 426 DGGTPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNA 485
D G+PPLS ETH+++ VAD NDNPP FPHSSYS YI ENNPRGASIF VTA D DS+ NA
Sbjct: 427 DQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNA 486
Query: 486 QITYSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSN 545
+TYSL +DT+QG P+SSYVSINS+TGVLYALQSFDYEQ R+L+LRV A DSGDPPLSSN
Sbjct: 487 LVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSN 546
Query: 546 MSLSLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 605
+SLSLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVDKDSGQNAWLS
Sbjct: 547 VSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLS 606
Query: 606 YLLLKASEPGLFAVGLYTGE 625
Y LLKASEPGLFAVG +TGE
Sbjct: 607 YRLLKASEPGLFAVGEHTGE 626
Score = 165 bits (417), Expect = 2e-40
Identities = 156/529 (29%), Positives = 232/529 (43%), Gaps = 55/529 (10%)
Query: 228 IQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPK 287
++V ++D+ND+ P F + ++ V E+ G R +A D D GVN +Y +++P
Sbjct: 120 VEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSY---QLSPN 176
Query: 288 LPKMFHLNSLTGEIST----LEG-LDYEETAFYEMEVQAQDGPGSLTKAKVLI--TVLDV 340
L T LEG LD E+ A + + + A DG + K V I VLDV
Sbjct: 177 NYFSLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDV 236
Query: 341 NDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPFKLEK--SI 398
ND+ P T + S+PE+ GT + + D D G NGEV + N+ K + +
Sbjct: 237 NDHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSF-RNMESKASEIFQL 295
Query: 399 DNYYRLVTTK-NLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTFPHSSY 457
D+ V + +LD E Y + ++ DGG L T + + V D NDN P +S
Sbjct: 296 DSQTGEVQVRGSLDFEKYRFYEMEIQGQDGGG--LFTTTTMLITVVDVNDNAPEITITSS 353
Query: 458 SVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTGVLYAL 517
I EN+P G I L+ QD DS +N Q++ + P + G Y L
Sbjct: 354 INSILENSPPGTVIALLNVQDQDSGENGQVSCFI--------PNHLPFKLEKTYGNYYKL 405
Query: 518 ---QSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGSTG 574
+ D E ++ + +TA D G PPLS+ + L V D NDNPP ++P S+
Sbjct: 406 ITSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNPP--VFPH-----SSY 458
Query: 575 MELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGL-----FAVGLYTGEVRTA 629
P + G + V A+D DS QNA ++Y L + G+ ++ TG +
Sbjct: 459 SAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYAL 518
Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYDL 689
++ L V +D G PPLS+ V+L++ V D L P+DG +L
Sbjct: 519 QSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVEL 578
Query: 690 TL------YLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
YLV V V W RLL+ASE GL
Sbjct: 579 APRSAEPGYLVTKVVAVD----------KDSGQNAWLSYRLLKASEPGL 617
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 674 bits (1738), Expect = 0.0
Identities = 372/782 (47%), Positives = 507/782 (64%), Gaps = 18/782 (2%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ G A +I YS+ EE K S VG++AKDLGL R+L R +R+ + +
Sbjct: 20 FLLSLFPG----ALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KE 73
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F +N SG L+ + RIDRE+IC + C+++F+ + E+ +N++ I V + DINDN P F
Sbjct: 74 YFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLF 133
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
+IN+KI E+T PG FPL A D DVG NSLQ Y L+ N +F LA + D KYPE
Sbjct: 134 KQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPE 193
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L+L+ LDREE +H LVLTA DGGDPP+S T I++ V D ND+ PVFS Y+VT+ E
Sbjct: 194 LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRE 253
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
+VP G +L V A D DEG+N E+TYSF + ++ F+LN TGEI+T + LD+E +
Sbjct: 254 DVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIAS 313
Query: 314 FYEMEVQAQDGPGSLTK-AKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Y + ++A+D PG L + + +LD ND APEV +TS+S+ +PED+P GTVIAL +
Sbjct: 314 SYTLSIEAKD-PGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTR 372
Query: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
DRDSG+NGEV C + N F L+ S NYY+LVT LDRE + YN+T+ ATDGG PPL
Sbjct: 373 DRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPL 432
Query: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
S + + ++D NDN P F +SY V++AENNP GASI ++A D D + Q++YS+
Sbjct: 433 SSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIV 492
Query: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
++ + SYVS+++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 493 ASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 552
Query: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612
Query: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 672
Query: 673 ADLGS-LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGG 731
DL EPSD L YLVVA+A +S +F V++ ++LRLR +S + G
Sbjct: 673 PDLSDRREPSDP--QAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPG 730
Query: 732 LANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQ--PNYV---DMLISQESCE 786
L++ P + YS+ + + + S K+ F P V D++ S E
Sbjct: 731 LSSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWE 788
Query: 787 KN 788
+N
Sbjct: 789 QN 790
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 674 bits (1738), Expect = 0.0
Identities = 372/782 (47%), Positives = 507/782 (64%), Gaps = 18/782 (2%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ G A +I YS+ EE K S VG++AKDLGL R+L R +R+ + +
Sbjct: 20 FLLSLFPG----ALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KE 73
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F +N SG L+ + RIDRE+IC + C+++F+ + E+ +N++ I V + DINDN P F
Sbjct: 74 YFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLF 133
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
+IN+KI E+T PG FPL A D DVG NSLQ Y L+ N +F LA + D KYPE
Sbjct: 134 KQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPE 193
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L+L+ LDREE +H LVLTA DGGDPP+S T I++ V D ND+ PVFS Y+VT+ E
Sbjct: 194 LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRE 253
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
+VP G +L V A D DEG+N E+TYSF + ++ F+LN TGEI+T + LD+E +
Sbjct: 254 DVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIAS 313
Query: 314 FYEMEVQAQDGPGSLTK-AKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQ 372
Y + ++A+D PG L + + +LD ND APEV +TS+S+ +PED+P GTVIAL +
Sbjct: 314 SYTLSIEAKD-PGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTR 372
Query: 373 DRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPL 432
DRDSG+NGEV C + N F L+ S NYY+LVT LDRE + YN+T+ ATDGG PPL
Sbjct: 373 DRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPL 432
Query: 433 SRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLA 492
S + + ++D NDN P F +SY V++AENNP GASI ++A D D + Q++YS+
Sbjct: 433 SSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIV 492
Query: 493 EDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFV 552
++ + SYVS+++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 493 ASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLV 552
Query: 553 LDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKAS 612
D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+AS
Sbjct: 553 GDLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQAS 612
Query: 613 EPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672
EPGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 613 EPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVL 672
Query: 673 ADLGS-LEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGG 731
DL EPSD L YLVVA+A +S +F V++ ++LRLR +S + G
Sbjct: 673 PDLSDRREPSDP--QAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPG 730
Query: 732 LANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQ--PNYV---DMLISQESCE 786
L++ P + YS+ + + + S K+ F P V D++ S E
Sbjct: 731 LSSKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWE 788
Query: 787 KN 788
+N
Sbjct: 789 QN 790
>gi|14270490 protocadherin gamma subfamily B, 1 isoform 2 precursor
[Homo sapiens]
Length = 810
Score = 671 bits (1732), Expect = 0.0
Identities = 369/759 (48%), Positives = 498/759 (65%), Gaps = 23/759 (3%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ G A + +I Y++ EE GS VG +AKDLGL REL R +R+ +
Sbjct: 18 FLLSLFCG----AISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F ++ SG L+ GRIDRE+IC + C + F + E+ MN++ + V I DINDN PRF
Sbjct: 71 YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
+ + I+++I E+ PGV+F L A D DV NSL+ Y ++PN++FSL+ + D +KYP
Sbjct: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L+LE+ LDRE + H L+LTA DGGDPP S T HI + V D ND+ PVFS Y+V++ E
Sbjct: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
NVP GT +L V A D DEG+N E+TY+F +P +F+LN TG+I+T LD+EET+
Sbjct: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETS 309
Query: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373
Y + V+A+DG V I ++D NDNAPEVT S S+ IPED+ LGTVIAL ++D
Sbjct: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
Query: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433
+DSG+NG VTC E +PFKLE + NYY+LV L+RE + YN+T+ ATD G P LS
Sbjct: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
Query: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
T I + ++D NDN P F +SY V+++ENNP GASI V+A D D N +++YS+
Sbjct: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
Query: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553
++ + SYVS++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613
D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673
PGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
Query: 674 DLGSL-EPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
DL EPSD +L YLVVA+A +S +FL V++ +ALRLRR + GL
Sbjct: 670 DLSDRPEPSDP--QTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGL 727
Query: 733 AN-----VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKS 766
+ VP +H G YS+ + + + S K+
Sbjct: 728 CSKSGPGVPPNHSEG-------TLPYSYNLCIASHSAKT 759
>gi|11128037 protocadherin gamma subfamily B, 1 isoform 1 precursor
[Homo sapiens]
Length = 927
Score = 671 bits (1732), Expect = 0.0
Identities = 369/759 (48%), Positives = 498/759 (65%), Gaps = 23/759 (3%)
Query: 14 FLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQ 73
FLLS+ G A + +I Y++ EE GS VG +AKDLGL REL R +R+ +
Sbjct: 18 FLLSLFCG----AISQQIRYTIPEELANGSRVGKLAKDLGLSVRELPTRKLRVSAE---D 70
Query: 74 LFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRF 133
F ++ SG L+ GRIDRE+IC + C + F + E+ MN++ + V I DINDN PRF
Sbjct: 71 YFNVSLESGDLLVNGRIDREKICGRKLECALEFETVAENPMNVFHVVVVIQDINDNAPRF 130
Query: 134 LTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPE 193
+ + I+++I E+ PGV+F L A D DV NSL+ Y ++PN++FSL+ + D +KYP
Sbjct: 131 VAKGIDLEICESALPGVKFSLDSAQDADVEGNSLKLYTINPNQYFSLSTKESPDGSKYPV 190
Query: 194 LVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPE 253
L+LE+ LDRE + H L+LTA DGGDPP S T HI + V D ND+ PVFS Y+V++ E
Sbjct: 191 LLLEKPLDREHQSSHRLILTAMDGGDPPLSGTTHIWIRVTDANDNAPVFSQEVYRVSLQE 250
Query: 254 NVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETA 313
NVP GT +L V A D DEG+N E+TY+F +P +F+LN TG+I+T LD+EET+
Sbjct: 251 NVPWGTSVLRVMATDQDEGINAEITYAFLN-SPISTSLFNLNPNTGDITTNGTLDFEETS 309
Query: 314 FYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQD 373
Y + V+A+DG V I ++D NDNAPEVT S S+ IPED+ LGTVIAL ++D
Sbjct: 310 RYVLSVEAKDGGVHTAHCNVQIEIVDENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRD 369
Query: 374 RDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLS 433
+DSG+NG VTC E +PFKLE + NYY+LV L+RE + YN+T+ ATD G P LS
Sbjct: 370 KDSGQNGMVTCYTQEEVPFKLESTSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALS 429
Query: 434 RETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAE 493
T I + ++D NDN P F +SY V+++ENNP GASI V+A D D N +++YS+
Sbjct: 430 SRTSITLHISDINDNAPVFHQASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILA 489
Query: 494 DTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVL 553
++ + SYVS++ +GV++A ++FD+EQLR +L + A D G P LS+N+SL + V
Sbjct: 490 SDLEPRELLSYVSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 549
Query: 554 DQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASE 613
D NDN P +LYPAL DGS ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 550 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 609
Query: 614 PGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLA 673
PGLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + ADS+ EVL
Sbjct: 610 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 669
Query: 674 DLGSL-EPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGL 732
DL EPSD +L YLVVA+A +S +FL V++ +ALRLRR + GL
Sbjct: 670 DLSDRPEPSDP--QTELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGL 727
Query: 733 AN-----VPTSHFVGMDGVQAFLQTYSHEVSLTADSRKS 766
+ VP +H G YS+ + + + S K+
Sbjct: 728 CSKSGPGVPPNHSEG-------TLPYSYNLCIASHSAKT 759
>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
[Homo sapiens]
Length = 930
Score = 671 bits (1730), Expect = 0.0
Identities = 350/704 (49%), Positives = 478/704 (67%), Gaps = 3/704 (0%)
Query: 15 LLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQL 74
L +LL + + I YS+ EE KGS VG++AKDLGL +++ R +R+ +
Sbjct: 17 LFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVSAEKLH-- 74
Query: 75 FALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFL 134
F+++ SG L+ RIDRE+IC + RC + ++E+ +N++ + V I D+ND+ P+F
Sbjct: 75 FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQFD 134
Query: 135 TEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPEL 194
+EI+++I E+ + G R L A DPD+ NS++ Y+++ N +FSL V+ D KYPEL
Sbjct: 135 KKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSDGGKYPEL 194
Query: 195 VLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPEN 254
LE++LDREE+R H L+LTA DGGDPPRS+TAHI+++V D ND+ PVFS +Y++++ EN
Sbjct: 195 SLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSEN 254
Query: 255 VPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAF 314
+P G+ +L V A D DEGVN E+ Y FR MF L+ TG I + D+E+
Sbjct: 255 LPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVER 314
Query: 315 YEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDR 374
Y MEV+A+DG G T+ KV+I +LD NDN+PE+ +TSLS I E++P G V+ALF +D
Sbjct: 315 YTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDL 374
Query: 375 DSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSR 434
D G NGEV C I ++PFK+ S +NYY+LVT LDRE YN+T+ ATD G PPLS
Sbjct: 375 DFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSS 434
Query: 435 ETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAED 494
I + VAD NDN P F +SY V++AENNP GASI V+A D D N I+YS+
Sbjct: 435 SRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVAS 494
Query: 495 TIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLD 554
++ VSSYVS+++ +GV++A ++FD+EQLR L + A D G P LS+N+SL + V D
Sbjct: 495 DLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGD 554
Query: 555 QNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEP 614
+NDN P +LYPAL DGS ++ PRSAEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 555 RNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 614
Query: 615 GLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLAD 674
GLF++GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL + AD++ E+L D
Sbjct: 615 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPD 674
Query: 675 LGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRR 718
L P +L YLVVA+A +S +FL V++ +ALRLRR
Sbjct: 675 LSDRPVLSDP-QAELQFYLVVALALISVLFLLAVILAIALRLRR 717
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,539,335
Number of Sequences: 37866
Number of extensions: 1445114
Number of successful extensions: 10384
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 3248
Number of HSP's gapped (non-prelim): 634
length of query: 817
length of database: 18,247,518
effective HSP length: 111
effective length of query: 706
effective length of database: 14,044,392
effective search space: 9915340752
effective search space used: 9915340752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.