Search of human proteins with 14196465

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14196465 protocadherin gamma subfamily A, 3 isoform 2
precursor [Homo sapiens]
         (829 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1618   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1581   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1177   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1175   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1170   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1169   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1164   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1158   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1147   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1144   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1141   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1137   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1136   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1135   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1133   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1132   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1132   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1130   0.0  
gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1128   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1122   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1110   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1110   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1083   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1081   0.0  
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur...   831   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   691   0.0  
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs...   691   0.0  
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs...   672   0.0  
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs...   672   0.0  
gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precurs...   666   0.0  

>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 829/829 (100%), Positives = 829/829 (100%)

Query: 1   MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60
           MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA
Sbjct: 1   MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60

Query: 61  ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120
           ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE
Sbjct: 61  ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120

Query: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180
           IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL
Sbjct: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180

Query: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240
           AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP
Sbjct: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240

Query: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300
           MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE
Sbjct: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300

Query: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360
           VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG
Sbjct: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360

Query: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420
           TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI
Sbjct: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420

Query: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480
           SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD
Sbjct: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480

Query: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540
           SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP
Sbjct: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540

Query: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720
           TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720

Query: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQVSLFISLIIKNKYENVVIIKL 829
           SQESCEKSEPLLITQDLLEMKGDSNLLQVSLFISLIIKNKYENVVIIKL
Sbjct: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQVSLFISLIIKNKYENVVIIKL 829


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1581 bits (4094), Expect = 0.0
 Identities = 808/808 (100%), Positives = 808/808 (100%)

Query: 1   MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60
           MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA
Sbjct: 1   MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELA 60

Query: 61  ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120
           ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE
Sbjct: 61  ERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVE 120

Query: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180
           IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL
Sbjct: 121 IEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSL 180

Query: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240
           AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP
Sbjct: 181 AVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPP 240

Query: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300
           MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE
Sbjct: 241 MFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGE 300

Query: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360
           VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG
Sbjct: 301 VSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEG 360

Query: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420
           TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI
Sbjct: 361 TVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNI 420

Query: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480
           SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD
Sbjct: 421 SLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPD 480

Query: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540
           SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP
Sbjct: 481 SNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNP 540

Query: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720
           TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWH 720

Query: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780
           KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
Sbjct: 721 KSRLLQASGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQ 808
           SQESCEKSEPLLITQDLLEMKGDSNLLQ
Sbjct: 781 SQESCEKSEPLLITQDLLEMKGDSNLLQ 808


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1177 bits (3044), Expect = 0.0
 Identities = 604/799 (75%), Positives = 667/799 (83%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           R L LLC LL TL E  +GQIRYSV EE+D+GSFVGNIA DLGLEP  LAE+GVRIVSRG
Sbjct: 11  RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           R+QLF+LNP+SGSLVTA RIDREELCAQ   CL+  NIL+EDKL I+ VE+EI DINDNA
Sbjct: 71  RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P F  EELE+KI E T PG R P+K A D DVG N+LQ Y L+PND+FSL V   ++G K
Sbjct: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
           YPELVLER+LDRE++ +H LVLVASDGGDPV SG   I V VLDANDN P+FTQPEYR+S
Sbjct: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           + EN  VGTR+LTV ATD DEG+ AQV Y L+K PG+ +E+F L S SGE++I+K LDYE
Sbjct: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
           DA F+EI IEAQDGPGLL+RAK++VTVLDVNDNAPE  +TS TSSV E+   G  I L +
Sbjct: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           VHDRDSGQN      +  +LPFKLEKS+D YYRLVT  +LDREQ S YNI+L A DGG+P
Sbjct: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
            LST+ HI L V DINDN P F   SYS YIPENNPRGAS+FSVTA DPDSN+NA +TY+
Sbjct: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
             EDT+QGAPLSS++SINS+TGVLYALRSFDYEQ RDL++ V A DSGNPPLSSNVSL+L
Sbjct: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVADRIPD
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
           ILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730

Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
            L     SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK + 
Sbjct: 731 SLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDF 790

Query: 791 LLITQDLLEMKGDSNLLQV 809
           L   Q LLE + +    QV
Sbjct: 791 LSAPQSLLEEEREETFSQV 809


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1175 bits (3040), Expect = 0.0
 Identities = 603/798 (75%), Positives = 666/798 (83%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           R L LLC LL TL E  +GQIRYSV EE+D+GSFVGNIA DLGLEP  LAE+GVRIVSRG
Sbjct: 11  RKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG 70

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           R+QLF+LNP+SGSLVTA RIDREELCAQ   CL+  NIL+EDKL I+ VE+EI DINDNA
Sbjct: 71  RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNA 130

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P F  EELE+KI E T PG R P+K A D DVG N+LQ Y L+PND+FSL V   ++G K
Sbjct: 131 PRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNK 190

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
           YPELVLER+LDRE++ +H LVLVASDGGDPV SG   I V VLDANDN P+FTQPEYR+S
Sbjct: 191 YPELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRIS 250

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           + EN  VGTR+LTV ATD DEG+ AQV Y L+K PG+ +E+F L S SGE++I+K LDYE
Sbjct: 251 IPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYE 310

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
           DA F+EI IEAQDGPGLL+RAK++VTVLDVNDNAPE  +TS TSSV E+   G  I L +
Sbjct: 311 DATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFN 370

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           VHDRDSGQN      +  +LPFKLEKS+D YYRLVT  +LDREQ S YNI+L A DGG+P
Sbjct: 371 VHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNP 430

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
            LST+ HI L V DINDN P F   SYS YIPENNPRGAS+FSVTA DPDSN+NA +TY+
Sbjct: 431 SLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS 490

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
             EDT+QGAPLSS++SINS+TGVLYALRSFDYEQ RDL++ V A DSGNPPLSSNVSL+L
Sbjct: 491 FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSL 550

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVADRIPD
Sbjct: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPD 670

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
           ILADLGSLEPSA PNDSDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGG
Sbjct: 671 ILADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGG 730

Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
            L     SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK + 
Sbjct: 731 SLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDF 790

Query: 791 LLITQDLLEMKGDSNLLQ 808
           L   Q LLE + +    Q
Sbjct: 791 LSAPQSLLEEEREETFSQ 808


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1170 bits (3026), Expect = 0.0
 Identities = 592/796 (74%), Positives = 671/796 (84%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L  +C LLG L E  + QI YSV EE ++GS VGNIA DLGL PRELAERGVRIVSRGRT
Sbjct: 13  LLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLF+LNP+SG+LVTA RIDREELC + P C+  + IL+ED +KI  VE+EI D+NDN P+
Sbjct: 73  QLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPS 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F TE+ EIK+ E   PG RFP+  AFDPDVG+NSLQ Y+L+ N YFSL V S ++G KYP
Sbjct: 133 FGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLERALDRE++ +H LVL A DGGDPV SG   I +I++D NDN P+FTQPEY VSV 
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           ENVPVGTRLLTV ATDPDEG N  V+Y   K+  KI+++F LNS+SG+++IL  LDYED+
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDS 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FY+I +EA DGPGL +R+K+LVTVLD NDNAPE+T+TSLTSSV E  + G  IAL +VH
Sbjct: 313 GFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D DSG NG V   +  NLPF LEK+   YYRL+T  +LDRE++SEYNI++ A+D G+PPL
Sbjct: 373 DSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STETHI+L V+DINDNPPTFPH SYSAYIPENNPRGASI S+TAQDPDS +NARITY+L 
Sbjct: 433 STETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLA 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT QGAPLSS+VSINSNTG+LYAL SFDYEQFRDL+LL+TASDSG+PPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY LLK+S
Sbjct: 553 LDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVAD IPD+L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+LRRWHKSRLL A G  L
Sbjct: 673 ADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSRL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEPLL 792

Query: 793 ITQDLLEMKGDSNLLQ 808
           ITQDLLE KGD NL Q
Sbjct: 793 ITQDLLETKGDPNLQQ 808


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1169 bits (3024), Expect = 0.0
 Identities = 594/798 (74%), Positives = 673/798 (84%), Gaps = 1/798 (0%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L  +C LLG L E  + QI YSV EE ++GS VGNIA DLGL PRELAERGVRIVSRGRT
Sbjct: 13  LLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLF+LNP+SG+LVTA RIDREELC + P C+  + IL+ED +KI  VE+EI D+NDN P+
Sbjct: 73  QLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPS 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F TE+ EIK+ E   PG RFP+  AFDPDVG+NSLQ Y+L+ N YFSL V S ++G KYP
Sbjct: 133 FGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDVQSGADGIKYP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLERALDRE++ +H LVL A DGGDPV SG   I +I++D NDN P+FTQPEY VSV 
Sbjct: 193 ELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVR 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           ENVPVGTRLLTV ATDPDEG N  V+Y   K+  KI+++F LNS+SG+++IL  LDYED+
Sbjct: 253 ENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDS 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FY+I +EA DGPGL +R+K+LVTVLD NDNAPE+T+TSLTSSV E  + G  IAL +VH
Sbjct: 313 GFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALFNVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D DSG NG V   +  NLPF LEK+   YYRL+T  +LDRE++SEYNI++ A+D G+PPL
Sbjct: 373 DSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STETHI+L V+DINDNPPTFPH SYSAYIPENNPRGASI S+TAQDPDS +NARITY+L 
Sbjct: 433 STETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSGDNARITYSLA 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT QGAPLSS+VSINSNTG+LYAL SFDYEQFRDL+LL+TASDSG+PPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNAWLSY LLK+S
Sbjct: 553 LDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTVAVAD IPD+L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIPDVL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGSL+PSA P+DS LTLYLVVAVAAVSCVFLAFV VLLAL+LRRWHKSRLL A G  L
Sbjct: 673 ADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSRL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIF QP+YADTLIS+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISRESCEKSEPLL 792

Query: 793 ITQDLLEMKGDSNLLQVS 810
           ITQDLLE KGD N LQVS
Sbjct: 793 ITQDLLETKGDPN-LQVS 809


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 596/798 (74%), Positives = 671/798 (84%)

Query: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
           LL  LLGTL    + QIRYS+ EEL+KGSFVGNI  DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15  LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74

Query: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
           FSLNP++GSLVTA RIDREELCAQ P CLV  NILVEDKL ++ VE+EI DINDN P F 
Sbjct: 75  FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134

Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
            EELE+KI E   P +RFP+   +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194

Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
           VLE  LDRE + +++LVL A DGGDPV S    I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254

Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
           +PVGT +L V ATD DEG + +V+Y   K+  KI++IF LN ++GE+S   +LDYED+ F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314

Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
           YE+ +EA+DGPGL  RAK+L+T+LDVNDN PE+ +TS + ++ E    G  IAL  V DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374

Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
           DSG NG V   +  +LPF+LEKS+  YYRLVT  +LDRE++  YNI++ A+D G+PPLST
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434

Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
           ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494

Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
           TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
           LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734

Query: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794
            PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794

Query: 795 QDLLEMKGDSNLLQVSLF 812
           QDLLE KG+   LQVS F
Sbjct: 795 QDLLETKGEPRQLQVSFF 812


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1158 bits (2996), Expect = 0.0
 Identities = 593/794 (74%), Positives = 668/794 (84%)

Query: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
           LL  LLGTL    + QIRYS+ EEL+KGSFVGNI  DLGLEP+ELAE GVRIVSRGR QL
Sbjct: 15  LLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQL 74

Query: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
           FSLNP++GSLVTA RIDREELCAQ P CLV  NILVEDKL ++ VE+EI DINDN P F 
Sbjct: 75  FSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFL 134

Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
            EELE+KI E   P +RFP+   +DPDVG+NSLQ +KLS N +FS+ V S + G KYPEL
Sbjct: 135 KEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPEL 194

Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
           VLE  LDRE + +++LVL A DGGDPV S    I V VLD NDN PMFTQP YRVSV EN
Sbjct: 195 VLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPEN 254

Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
           +PVGT +L V ATD DEG + +V+Y   K+  KI++IF LN ++GE+S   +LDYED+ F
Sbjct: 255 LPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSF 314

Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
           YE+ +EA+DGPGL  RAK+L+T+LDVNDN PE+ +TS + ++ E    G  IAL  V DR
Sbjct: 315 YELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDR 374

Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
           DSG NG V   +  +LPF+LEKS+  YYRLVT  +LDRE++  YNI++ A+D G+PPLST
Sbjct: 375 DSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLST 434

Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
           ET I+L+V D NDNPPTFPH SYS Y+ ENNPRGASIFSV A DPD + NA+++Y+L ED
Sbjct: 435 ETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAED 494

Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
           TLQGAPLSS+VSINS+TG+LYALRSFDYEQ RDL+L VTASDSG+PPLSSNVSL+LFVLD
Sbjct: 495 TLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLD 554

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP
Sbjct: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD
Sbjct: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLAS 734
           LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRL+RWHKSRLLQASGGGLAS
Sbjct: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLAS 734

Query: 735 TPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLIT 794
            PGSHFVG +GVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI+QES EKSEPLLIT
Sbjct: 735 MPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLIT 794

Query: 795 QDLLEMKGDSNLLQ 808
           QDLLE KG+   LQ
Sbjct: 795 QDLLETKGEPRQLQ 808


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1147 bits (2968), Expect = 0.0
 Identities = 580/800 (72%), Positives = 676/800 (84%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           RG  LL  LLGT  E  +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11  RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           RTQLF+LN +SGSLVTA RIDREE+CAQ   CLV  NIL+EDK+ ++ +++EI DINDN 
Sbjct: 71  RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P F TEE+ +KI E T PG RFP+  A DPDVG NSLQ+Y+LSPN +FSLAV S  +  K
Sbjct: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
           YPELVLER LDRE++ +H LVL ASDGGDP  S   HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           V ENVPVGTRLLTV+A D DEG N +V+Y   K+  K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
           +  FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+  +G  IAL  
Sbjct: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           + DRDSG+NG+V   +  NLPFKLEKSID YYRLVT  +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
           PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
           L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
           +LADLGSLEPS  P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730

Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
           GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++ 
Sbjct: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790

Query: 791 LLITQDLLEMKGDSNLLQVS 810
           LL + D  E K +   +QVS
Sbjct: 791 LLTSVDFQECKENLPSIQVS 810


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1144 bits (2960), Expect = 0.0
 Identities = 577/791 (72%), Positives = 671/791 (84%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           RG  LL  LLGT  E  +G+I YSVSEE DKGSFVG+IA DLGLEPRELAERGVRI+SRG
Sbjct: 11  RGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRG 70

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           RTQLF+LN +SGSLVTA RIDREE+CAQ   CLV  NIL+EDK+ ++ +++EI DINDN 
Sbjct: 71  RTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNV 130

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P F TEE+ +KI E T PG RFP+  A DPDVG NSLQ+Y+LSPN +FSLAV S  +  K
Sbjct: 131 PRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETK 190

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
           YPELVLER LDRE++ +H LVL ASDGGDP  S   HIQV V+D ND+ P+F+ P+Y+V+
Sbjct: 191 YPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVT 250

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           V ENVPVGTRLLTV+A D DEG N +V+Y   K+  K+ ++FHLNS++GE+S L+ LDYE
Sbjct: 251 VPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYE 310

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
           +  FYE++++AQDGPG L++AK+L+TVLDVNDNAPE+T+TSL+SS+PE+  +G  IAL  
Sbjct: 311 ETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFY 370

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           + DRDSG+NG+V   +  NLPFKLEKSID YYRLVT  +LDRE +S YNI+L+A+DGG+P
Sbjct: 371 LQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTP 430

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
           PLS ETHI + V D NDNPPTFPH SYS YI ENNPRGASIF VTAQD DS +NA+ITY+
Sbjct: 431 PLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYS 490

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
           L EDT+QGAP+SS+VSINS+TGVLYAL+SFDYEQ R+L+L VTA DSG+PPLSSN+SL+L
Sbjct: 491 LAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSL 550

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY LLK
Sbjct: 551 FVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLK 610

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 611 ASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 670

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
           +LADLGSLEPS  P + DLTLYLVVAVA VSCVFLAFV+VLLALRLRRWHKSRLLQAS G
Sbjct: 671 VLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEG 730

Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
           GLA+ P SHFVG DGV+AFLQTYSHEVSLTADSRKSHLIFPQPNY D LISQESCEK++ 
Sbjct: 731 GLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDS 790

Query: 791 LLITQDLLEMK 801
           LL + D  E K
Sbjct: 791 LLTSVDFQECK 801


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1141 bits (2952), Expect = 0.0
 Identities = 585/810 (72%), Positives = 662/810 (81%), Gaps = 1/810 (0%)

Query: 12  GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71
           GL LLC   G   E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 16  GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75

Query: 72  TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131
           TQLFSLNP+SGSL+TA RIDREELCAQ   C+V  NILVED++K+F +EIE+ DINDNAP
Sbjct: 76  TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135

Query: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191
            F  E L++KI E    G RFP+  A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195

Query: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251
           PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255

Query: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311
            EN+PVGT+LLTV ATD DEG N +V+Y   K+P      F LN  +GE+ I ++LDYE+
Sbjct: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315

Query: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371
             FYEI+I+A+DG   L+ AK+L+TV DVNDN+PE+TITSL S V E+  +G  +AL++V
Sbjct: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375

Query: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431
           HD DS QNGQV   +L  LPFKLEKSID YYRLV   +LDREQ+S YNI++ A+DGGSPP
Sbjct: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435

Query: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491
           LSTE H  L V DINDNPPTF  +SY  YIPENN RGASIFSVTA DPDS  NA+I Y+L
Sbjct: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495

Query: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551
            EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
           VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671
           SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675

Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731
           LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735

Query: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791
           L    GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795

Query: 792 LITQDLLEMKGDSNLLQVS-LFISLIIKNK 820
            +  D      D+ L+ VS +FI   +K K
Sbjct: 796 SLLDDSKFPIEDTPLVPVSFIFIFTFVKKK 825


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1137 bits (2942), Expect = 0.0
 Identities = 584/805 (72%), Positives = 661/805 (82%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P 
Sbjct: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  E+LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLERALDRE++  H LVL ASDGG P  S  + I V VLD NDN P+F  P YRV V 
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           EN+P GTRLLTV A+DPDEG N +V+Y   K+  K   +F LN  +GE+SI KSLDYE+ 
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FYE++I+A+D   LL R K+L++V DVNDN PE+ ITSL S V E    G  IA + VH
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D+DSG+NGQV  +   NLPFKLEKSI  YYRLVT   LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS  NA++TY++T
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
            +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
              P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792

Query: 793 ITQDLLEMKGDSNLLQVSLFISLII 817
            + D  E K +++  QVSL + L++
Sbjct: 793 TSVDFHEYKNEADHGQVSLVLCLLL 817


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1136 bits (2939), Expect = 0.0
 Identities = 577/785 (73%), Positives = 650/785 (82%)

Query: 12  GLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGR 71
           GL LLC   G   E G+ QI YS+ EEL+KGSFVGNI+ DLGL PRELAERGVRIVSRGR
Sbjct: 16  GLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIVSRGR 75

Query: 72  TQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAP 131
           TQLFSLNP+SGSL+TA RIDREELCAQ   C+V  NILVED++K+F +EIE+ DINDNAP
Sbjct: 76  TQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDINDNAP 135

Query: 132 NFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKY 191
            F  E L++KI E    G RFP+  A DPDVG+NSLQ+Y+LSPN +FSL V S + G KY
Sbjct: 136 KFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRANGVKY 195

Query: 192 PELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSV 251
           PELVLE +LDRE++ IH LVL ASDGGDP+ SG + + V V DANDN P+FT PEYRVSV
Sbjct: 196 PELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEYRVSV 255

Query: 252 WENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYED 311
            EN+PVGT+LLTV ATD DEG N +V+Y   K+P      F LN  +GE+ I ++LDYE+
Sbjct: 256 PENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENLDYEE 315

Query: 312 AMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDV 371
             FYEI+I+A+DG   L+ AK+L+TV DVNDN+PE+TITSL S V E+  +G  +AL++V
Sbjct: 316 TGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVALLNV 375

Query: 372 HDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPP 431
           HD DS QNGQV   +L  LPFKLEKSID YYRLV   +LDREQ+S YNI++ A+DGGSPP
Sbjct: 376 HDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDGGSPP 435

Query: 432 LSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYAL 491
           LSTE H  L V DINDNPPTF  +SY  YIPENN RGASIFSVTA DPDS  NA+I Y+L
Sbjct: 436 LSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQIIYSL 495

Query: 492 TEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLF 551
            EDT+QG PLSS++SINS+TGVLYALRSFDYEQF +L++ VTASDSG+PPLSSNVSL+LF
Sbjct: 496 AEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVSLSLF 555

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
           VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA
Sbjct: 556 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 615

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDI 671
           SEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP +
Sbjct: 616 SEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 675

Query: 672 LADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGG 731
           LADLGS E  A    SDLTLYLVVAVAAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGG
Sbjct: 676 LADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGG 735

Query: 732 LASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPL 791
           L    GSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK++PL
Sbjct: 736 LTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKNDPL 795

Query: 792 LITQD 796
            +  D
Sbjct: 796 SLLDD 800


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1135 bits (2935), Expect = 0.0
 Identities = 580/798 (72%), Positives = 662/798 (82%), Gaps = 1/798 (0%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L L   LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLF+LNP+SGSLVTA RIDREELCAQ PLC+V  NILVE+K+KI+ VE+EI DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  EEL++K+ E    GTR  +  A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLE+ LDREK+ +H L+L A DGGDPV SG  HI+V VLDANDN P+FT  EY VSV 
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           EN+PVGTRLL + ATDPDEG N +++Y       KI+E F L+S  GE+S L+SLDYE++
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FY +++ AQDG  L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+   G  IAL  VH
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D DSG+NG++   +  NLPFKLEKS+D YY L+T   LDRE+ S+YNI+L   D G+PPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STE+HI L V D+NDNPP FP  SYS  + ENNPRG SIFSVTA DPDS +NAR+TY+L 
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792

Query: 793 ITQDLLEMKGDSNLLQVS 810
           ++ D ++   +   +QVS
Sbjct: 793 MS-DKVDANKEERRVQVS 809


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1133 bits (2930), Expect = 0.0
 Identities = 578/796 (72%), Positives = 659/796 (82%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L L   LLGTLCE GSGQIRYS+ EELDKGSFVGNIA DLGLEP+ELAERGVRIVSRGRT
Sbjct: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLF+LNP+SGSLVTA RIDREELCAQ PLC+V  NILVE+K+KI+ VE+EI DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  EEL++K+ E    GTR  +  A D DVG+NSL++Y+LS N +FSL V S ++G KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLE+ LDREK+ +H L+L A DGGDPV SG  HI+V VLDANDN P+FT  EY VSV 
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           EN+PVGTRLL + ATDPDEG N +++Y       KI+E F L+S  GE+S L+SLDYE++
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FY +++ AQDG  L++ AK++VTV DVNDNAPE+ +TSLTSS+ E+   G  IAL  VH
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D DSG+NG++   +  NLPFKLEKS+D YY L+T   LDRE+ S+YNI+L   D G+PPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STE+HI L V D+NDNPP FP  SYS  + ENNPRG SIFSVTA DPDS +NAR+TY+L 
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT QGAPLSS+VSINS+TGVLYALRSFDYEQ RDL+L VTASDSGNPPLSSNVSL+LFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVADRIPDIL
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGS++    P D DLTLYLVVAVAAVSCVFLAFVIVLL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTL+S+ESCEKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792

Query: 793 ITQDLLEMKGDSNLLQ 808
           ++  +   K +  + Q
Sbjct: 793 MSDKVDANKEERRVQQ 808


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1132 bits (2927), Expect = 0.0
 Identities = 578/789 (73%), Positives = 658/789 (83%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L LLC  L  L E G+G I YSV EE DKGSFVGNIA DLGL+P+ELA+ GVRIVSRGR 
Sbjct: 13  LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
            LF+LNP+SGSL+TA RIDREELCAQ   CLV  NILVEDK+K+F VE+EI DINDN P 
Sbjct: 73  PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  EELE K+ E+T PGTR  +    D DVG+NSLQ+Y+LS N +FSL V   ++G ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           E+VL+  LDRE++ +H L+L ASDGG+PV SG L I + V+DANDNPP FTQ +Y ++V 
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           ENVP+GT+LL VNATDPDEG N +V+Y    +  ++A+IF L+S +GE+S  + LD+E+ 
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
             Y ++++AQDG GL+++ K+L+ VLDVNDNAPE+TITS+T++VPE    G  IALI VH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D+DSG NG    F+ GNLPFKLEK +D YYRLVT  +LDRE IS YNI++ A D G+P L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STETHI+L V DINDN P F   SYSAYIPENNPRGASIFSV A D DSN NA+ITY+L 
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT+QGAPLS+++SINS+TGVLYALRSFDYEQFRD++L V A DSG+PPLSSNVSL+LF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI DIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           AS PGSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK   L 
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792

Query: 793 ITQDLLEMK 801
             Q LLE K
Sbjct: 793 APQSLLEDK 801


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1132 bits (2927), Expect = 0.0
 Identities = 578/789 (73%), Positives = 658/789 (83%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L LLC  L  L E G+G I YSV EE DKGSFVGNIA DLGL+P+ELA+ GVRIVSRGR 
Sbjct: 13  LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
            LF+LNP+SGSL+TA RIDREELCAQ   CLV  NILVEDK+K+F VE+EI DINDN P 
Sbjct: 73  PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  EELE K+ E+T PGTR  +    D DVG+NSLQ+Y+LS N +FSL V   ++G ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           E+VL+  LDRE++ +H L+L ASDGG+PV SG L I + V+DANDNPP FTQ +Y ++V 
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           ENVP+GT+LL VNATDPDEG N +V+Y    +  ++A+IF L+S +GE+S  + LD+E+ 
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
             Y ++++AQDG GL+++ K+L+ VLDVNDNAPE+TITS+T++VPE    G  IALI VH
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D+DSG NG    F+ GNLPFKLEK +D YYRLVT  +LDRE IS YNI++ A D G+P L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STETHI+L V DINDN P F   SYSAYIPENNPRGASIFSV A D DSN NA+ITY+L 
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT+QGAPLS+++SINS+TGVLYALRSFDYEQFRD++L V A DSG+PPLSSNVSL+LF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRI DIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLEPSAKPNDSDLTLYLVVA AAVSCVFLAFVIVLLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           AS PGSHFVG DGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK   L 
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLS 792

Query: 793 ITQDLLEMK 801
             Q LLE K
Sbjct: 793 APQSLLEDK 801


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 579/793 (73%), Positives = 653/793 (82%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L LLCALLGTL E G GQIRYSV EE DKGSFVGNI+ DLGL+PR+LA+ GVRIVSRGRT
Sbjct: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLF+LNP+SGSL+TA RIDREELCAQ P CL+ IN LVEDK K+F VEIEI DINDN P 
Sbjct: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  E+LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLERALDRE++  H LVL ASDGG P  S  + I V VLD NDN P+F  P YRV V 
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           EN+P GTRLLTV A+DPDEG N +V+Y   K+  K   +F LN  +GE+SI KSLDYE+ 
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FYE++I+A+D   LL R K+L++V DVNDN PE+ ITSL S V E    G  IA + VH
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           D+DSG+NGQV  +   NLPFKLEKSI  YYRLVT   LDRE +S YNI++ ASD G+PPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STET I LHV DINDNPPTFPH SYSAYI ENN RGASIFS+TA DPDS  NA++TY++T
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDTLQGAPLSS++SINS+TGVLYAL+SFDYEQ RDL+LLVTASDSG+PPLSSN+SL+LFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP++L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
            +LGSL+PS  PNDS LTLYLVVAVAA+SCVFLAFV VLL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
              P SHFVG + V+AFLQTYS EVSLTADSRKSHLIFPQPNYAD LISQE CEK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792

Query: 793 ITQDLLEMKGDSN 805
            + D  E K +++
Sbjct: 793 TSVDFHEYKNEAD 805


>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1128 bits (2917), Expect = 0.0
 Identities = 576/805 (71%), Positives = 666/805 (82%)

Query: 8   RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
           R+ +GL LL  LLGTL ETG  QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67

Query: 68  SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
            RGRTQLF+LNP+SGSLVTA RIDREELC     C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127

Query: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
           DNAP F   ELEIKI E      RFP+  A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187

Query: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
           G+KYPELVL+RALDRE+K  H LVL ASDGGDPV +G   I+V+VLDANDN P F QPEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247

Query: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
           R SV EN+ +GT+LL VNATDPDEG NA+V Y    +  K A++F L+  SG +S +  L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307

Query: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
           D+E++ FY+++++A D  G  +RAK+L+TVLDVNDNAPE+ +TSL SSVPE    G  IA
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367

Query: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
           L++V+D+DS +NGQV  F+ GNLPFKLEKS   YY LVT   LDREQ+  YNI++ A+D 
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427

Query: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
           G+PPLSTETHI+L+V D NDNPP FP  SYSAYIPENNPRG S+ SVTA DPD   NA+I
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487

Query: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
           TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547

Query: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
           LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667

Query: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
           IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727

Query: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
           SGGGL   P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787

Query: 788 SEPLLITQDLLEMKGDSNLLQVSLF 812
           SEPLL++ D +  K    L++VSL+
Sbjct: 788 SEPLLLSGDSVFSKDSHGLIEVSLY 812


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1122 bits (2902), Expect = 0.0
 Identities = 573/801 (71%), Positives = 662/801 (82%)

Query: 8   RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
           R+ +GL LL  LLGTL ETG  QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67

Query: 68  SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
            RGRTQLF+LNP+SGSLVTA RIDREELC     C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127

Query: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
           DNAP F   ELEIKI E      RFP+  A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187

Query: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
           G+KYPELVL+RALDRE+K  H LVL ASDGGDPV +G   I+V+VLDANDN P F QPEY
Sbjct: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247

Query: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
           R SV EN+ +GT+LL VNATDPDEG NA+V Y    +  K A++F L+  SG +S +  L
Sbjct: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307

Query: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
           D+E++ FY+++++A D  G  +RAK+L+TVLDVNDNAPE+ +TSL SSVPE    G  IA
Sbjct: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367

Query: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
           L++V+D+DS +NGQV  F+ GNLPFKLEKS   YY LVT   LDREQ+  YNI++ A+D 
Sbjct: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427

Query: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
           G+PPLSTETHI+L+V D NDNPP FP  SYSAYIPENNPRG S+ SVTA DPD   NA+I
Sbjct: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487

Query: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
           TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547

Query: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
           LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667

Query: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727
           IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727

Query: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787
           SGGGL   P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787

Query: 788 SEPLLITQDLLEMKGDSNLLQ 808
           SEPLL++ D +  K    L++
Sbjct: 788 SEPLLLSGDSVFSKDSHGLIE 808


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1110 bits (2872), Expect = 0.0
 Identities = 572/807 (70%), Positives = 660/807 (81%), Gaps = 3/807 (0%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           R L LLC  LGTL    + QIRYSV EE +KGSFVGNI+ DLGLEPRELA+RGVRIVSRG
Sbjct: 12  RLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRG 71

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           +TQLF++NP+SGSL+TA RIDREELC  +  C + + +LVED LKI+ VE+EI DINDNA
Sbjct: 72  KTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNA 131

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P+F  +E+EIK+ E  +PG RF +  A DPDVG+NSLQ+Y+LSPN+YFSL +   ++GAK
Sbjct: 132 PSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAK 191

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
            PELVLE +LDREK+  H L+L A DGGDP+  G + I+V+VLD ND+ PMFTQ  YRVS
Sbjct: 192 NPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVS 251

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           V EN+  GTR+L VNATDPDEG N +V Y    M  K +EIF L+S +GEV +  SLD+E
Sbjct: 252 VPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFE 311

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
              FYE++I+ QDG GL +   +L+TV+DVNDNAPEITITS  +S+ E    G  IAL++
Sbjct: 312 KYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLN 371

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           V D+DSG+NGQV  F+  +LPFKLEK+   YY+L+T+  LDRE +  YNI+L A+D GSP
Sbjct: 372 VQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSP 431

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
           PLS ETH+ L+V D NDNPP FPH SYSAYIPENNPRGASIFSVTA DPDS  NA +TY+
Sbjct: 432 PLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYS 491

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
           LT+DT+QG PLSS+VSINSNTGVLYAL+SFDYEQFRDL+L V A DSG+PPLSSNVSL+L
Sbjct: 492 LTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSL 551

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLK
Sbjct: 552 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLK 611

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 612 ASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 671

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
           +LADLGSLE  A    SDL+LYLVVAVAAVSC+FL FVIVLLALRL RWHKSRLLQAS G
Sbjct: 672 VLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEG 731

Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
           GLA  P SHFVG DGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQESCEKSEP
Sbjct: 732 GLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEP 791

Query: 791 LLITQD--LLEMKGDSNLLQVSLFISL 815
           LLI +D  ++  K D    QV  FISL
Sbjct: 792 LLIAEDSAIILGKCDPTSNQVR-FISL 817


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1110 bits (2871), Expect = 0.0
 Identities = 564/786 (71%), Positives = 650/786 (82%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           R L LLC  LGTL    + QIRYSV EE +KGSFVGNI+ DLGLEPRELA+RGVRIVSRG
Sbjct: 12  RLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRG 71

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           +TQLF++NP+SGSL+TA RIDREELC  +  C + + +LVED LKI+ VE+EI DINDNA
Sbjct: 72  KTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNA 131

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P+F  +E+EIK+ E  +PG RF +  A DPDVG+NSLQ+Y+LSPN+YFSL +   ++GAK
Sbjct: 132 PSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAK 191

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
            PELVLE +LDREK+  H L+L A DGGDP+  G + I+V+VLD ND+ PMFTQ  YRVS
Sbjct: 192 NPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVS 251

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           V EN+  GTR+L VNATDPDEG N +V Y    M  K +EIF L+S +GEV +  SLD+E
Sbjct: 252 VPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFE 311

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
              FYE++I+ QDG GL +   +L+TV+DVNDNAPEITITS  +S+ E    G  IAL++
Sbjct: 312 KYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLN 371

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           V D+DSG+NGQV  F+  +LPFKLEK+   YY+L+T+  LDRE +  YNI+L A+D GSP
Sbjct: 372 VQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSP 431

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
           PLS ETH+ L+V D NDNPP FPH SYSAYIPENNPRGASIFSVTA DPDS  NA +TY+
Sbjct: 432 PLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYS 491

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
           LT+DT+QG PLSS+VSINSNTGVLYAL+SFDYEQFRDL+L V A DSG+PPLSSNVSL+L
Sbjct: 492 LTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSL 551

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLK
Sbjct: 552 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLK 611

Query: 611 ASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPD 670
           ASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD IP+
Sbjct: 612 ASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPE 671

Query: 671 ILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGG 730
           +LADLGSLE  A    SDL+LYLVVAVAAVSC+FL FVIVLLALRL RWHKSRLLQAS G
Sbjct: 672 VLADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEG 731

Query: 731 GLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEP 790
           GLA  P SHFVG DGV+AFLQTYSHEVSL ADS+KSHLIFPQPNY DTLISQESCEKSEP
Sbjct: 732 GLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEP 791

Query: 791 LLITQD 796
           LLI +D
Sbjct: 792 LLIAED 797


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1083 bits (2802), Expect = 0.0
 Identities = 560/800 (70%), Positives = 637/800 (79%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L LLC+LLG L E  + QIRYSV EE +KG  VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLFSLNP+SG+LVTA RIDREELCAQ P CLV   +LVED++K++ +EIE+ DIND+AP 
Sbjct: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  E LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLERALDRE+   H LVL ASDGG+P  S  + I V VLD NDN P+F Q  YRV V 
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           ENVP GT LLT  A+D DEG N +V+Y   K+  K + +F LN  +GE+S  KSLDYE+ 
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FYE++I+A+DG GL    K+L++V DVNDN PE+TITSL S V E+   G  I L + H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           DRDSG+NGQV   +  NL F LE S + YYRL+TA  LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STE HITL V DINDNPP F   SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L 
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL 
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792

Query: 793 ITQDLLEMKGDSNLLQVSLF 812
           ++ D      D+ L+ VS F
Sbjct: 793 VSVDSKFPIEDTPLVPVSSF 812


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1081 bits (2795), Expect = 0.0
 Identities = 555/784 (70%), Positives = 630/784 (80%)

Query: 13  LALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRT 72
           L LLC+LLG L E  + QIRYSV EE +KG  VGNI+ DL LEPRELAER VRIVSRGRT
Sbjct: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72

Query: 73  QLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPN 132
           QLFSLNP+SG+LVTA RIDREELCAQ P CLV   +LVED++K++ +EIE+ DIND+AP 
Sbjct: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132

Query: 133 FPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYP 192
           F  E LE+KI E+ VPG R+P+  A DPDVG+NSLQ+Y+LSPN +FSL V +   GA  P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192

Query: 193 ELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVW 252
           ELVLERALDRE+   H LVL ASDGG+P  S  + I V VLD NDN P+F Q  YRV V 
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252

Query: 253 ENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDA 312
           ENVP GT LLT  A+D DEG N +V+Y   K+  K + +F LN  +GE+S  KSLDYE+ 
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312

Query: 313 MFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVH 372
            FYE++I+A+DG GL    K+L++V DVNDN PE+TITSL S V E+   G  I L + H
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372

Query: 373 DRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPL 432
           DRDSG+NGQV   +  NL F LE S + YYRL+TA  LDRE+ SEYNI++ A+D G+PPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432

Query: 433 STETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALT 492
           STE HITL V DINDNPP F   SYS Y+PENN RG SIFSV A DPDSN N+R+ Y+L 
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492

Query: 493 EDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFV 552
           EDT+QG+PLS++VSINS+TGVLYAL SFDYEQFRDL++ VTASDSG+PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDIL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+AD IPDIL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672

Query: 673 ADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGL 732
           ADLGSL+  A    SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732

Query: 733 ASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLL 792
           A  P SHFVG DGVRAFLQTYS E SLTADSRKSHLIFPQPNYADTLISQ+SCEK+EPL 
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792

Query: 793 ITQD 796
           ++ D
Sbjct: 793 VSVD 796


>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
           [Homo sapiens]
          Length = 750

 Score =  831 bits (2146), Expect = 0.0
 Identities = 417/615 (67%), Positives = 496/615 (80%)

Query: 11  RGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRG 70
           R L LLC  LGTL    + QIRYSV EE +KGSFVGNI+ DLGLEPRELA+RGVRIVSRG
Sbjct: 12  RLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRG 71

Query: 71  RTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNA 130
           +TQLF++NP+SGSL+TA RIDREELC  +  C + + +LVED LKI+ VE+EI DINDNA
Sbjct: 72  KTQLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNA 131

Query: 131 PNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAK 190
           P+F  +E+EIK+ E  +PG RF +  A DPDVG+NSLQ+Y+LSPN+YFSL +   ++GAK
Sbjct: 132 PSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAK 191

Query: 191 YPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVS 250
            PELVLE +LDREK+  H L+L A DGGDP+  G + I+V+VLD ND+ PMFTQ  YRVS
Sbjct: 192 NPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVS 251

Query: 251 VWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYE 310
           V EN+  GTR+L VNATDPDEG N +V Y    M  K +EIF L+S +GEV +  SLD+E
Sbjct: 252 VPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFE 311

Query: 311 DAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALID 370
              FYE++I+ QDG GL +   +L+TV+DVNDNAPEITITS  +S+ E    G  IAL++
Sbjct: 312 KYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLN 371

Query: 371 VHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSP 430
           V D+DSG+NGQV  F+  +LPFKLEK+   YY+L+T+  LDRE +  YNI+L A+D GSP
Sbjct: 372 VQDQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSP 431

Query: 431 PLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYA 490
           PLS ETH+ L+V D NDNPP FPH SYSAYIPENNPRGASIFSVTA DPDS  NA +TY+
Sbjct: 432 PLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYS 491

Query: 491 LTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNL 550
           LT+DT+QG PLSS+VSINSNTGVLYAL+SFDYEQFRDL+L V A DSG+PPLSSNVSL+L
Sbjct: 492 LTDDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSL 551

Query: 551 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLK 610
           FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLK
Sbjct: 552 FVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLK 611

Query: 611 ASEPGLFSVGLHTGE 625
           ASEPGLF+VG HTGE
Sbjct: 612 ASEPGLFAVGEHTGE 626



 Score =  171 bits (433), Expect = 3e-42
 Identities = 158/532 (29%), Positives = 233/532 (43%), Gaps = 48/532 (9%)

Query: 228 IQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGK 287
           ++V ++D NDN P F + E  + V E+   G R    NA DPD G N+  SY L   P  
Sbjct: 120 VEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLS--PNN 177

Query: 288 IAEIFHLNSVSG----EVSILKSLDYEDAMFYEIKIEAQDG--PGLLSRAKILVTVLDVN 341
              +       G    E+ +  SLD E    + + + A DG  P       I V VLDVN
Sbjct: 178 YFSLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVN 237

Query: 342 DNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPFKLEKSID-- 399
           D+ P  T +    SVPE  + G  + +++  D D G NG+V ++   N+  K  +     
Sbjct: 238 DHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEV-MYSFRNMESKASEIFQLD 296

Query: 400 -QYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPTFPHLSYS 458
            Q   +    SLD E+   Y + ++  DGG   L T T + + V+D+NDN P     S  
Sbjct: 297 SQTGEVQVRGSLDFEKYRFYEMEIQGQDGGG--LFTTTTMLITVVDVNDNAPEITITSSI 354

Query: 459 AYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSINSNTGVLYAL- 517
             I EN+P G  I  +  QD DS  N +++  +        P      +    G  Y L 
Sbjct: 355 NSILENSPPGTVIALLNVQDQDSGENGQVSCFI--------PNHLPFKLEKTYGNYYKLI 406

Query: 518 --RSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPALPTDGSTGV 575
             R  D E  +   + +TA+D G+PPLS+   + L V D NDN P  ++P      S+  
Sbjct: 407 TSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNPP--VFPH-----SSYS 459

Query: 576 ELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGL-----FSVGLHTGEVRTAR 630
              P +   G  +  V A+D DS QNA ++Y L   +  G+      S+  +TG +   +
Sbjct: 460 AYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGVLYALQ 519

Query: 631 ALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR---IPDILADLGSLEPSAKPNDS 687
           +          L V  +D G PPLS+ V+L++ V D+    P+IL         A P D 
Sbjct: 520 SFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILY-------PALPTDG 572

Query: 688 DLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTPGSH 739
              + L    A    +    V V        W   RLL+AS  GL +  G H
Sbjct: 573 STGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAV-GEH 623


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  691 bits (1783), Expect = 0.0
 Identities = 352/708 (49%), Positives = 483/708 (68%), Gaps = 3/708 (0%)

Query: 30  QIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAER 89
           QIRYS+ EEL K S VGN+A DLGL  R+L  R +R+ +    + F++NP+SG L+ ++R
Sbjct: 32  QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89

Query: 90  IDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPG 149
           IDRE++C + PLC++  + + E+ L IF + + ++DINDN P F   ++ +KIGE T PG
Sbjct: 90  IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149

Query: 150 TRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQ 209
           T FP+  A D DVG NSLQ Y L+ N+YF LA     +G KYPEL+L+ +LDRE+  +HQ
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209

Query: 210 LVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDP 269
           LVL A DGGDP  SG   I++ V DANDNPP+F+Q  YRV++ E+VP G  +L V ATD 
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269

Query: 270 DEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLS 329
           DEG NA+++Y    +  ++   F+LN  +GE++    LD+E A  Y + IEA+D   L +
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329

Query: 330 RAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGN 389
              I V +LD ND APE+ +TS+++ +PE+   G  IALI   DRDSG+NG+V   VLGN
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389

Query: 390 LPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNP 449
             F L+ S   YY+LVT  +LDRE+I EYN+++ A+DGG PPLS+   +TLH+ D+NDN 
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449

Query: 450 PTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSINS 509
           P F   SY  ++ ENNP GASI  ++A DPD   + +++Y++    L+   + S+VS+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509

Query: 510 NTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPALPT 569
            +GV++A R+FD+EQ R  +L + A D G+P LS+NVSL + V D NDNAP +LYPAL  
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569

Query: 570 DGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
           DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDL 689
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L DL      + P  + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688

Query: 690 TLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTPG 737
             YLVVA+A +S +F   VI+ ++LRLR   +S        GL+S PG
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPG 736


>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 811

 Score =  691 bits (1783), Expect = 0.0
 Identities = 352/708 (49%), Positives = 483/708 (68%), Gaps = 3/708 (0%)

Query: 30  QIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAER 89
           QIRYS+ EEL K S VGN+A DLGL  R+L  R +R+ +    + F++NP+SG L+ ++R
Sbjct: 32  QIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSAE--KEYFTVNPESGDLLVSDR 89

Query: 90  IDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPG 149
           IDRE++C + PLC++  + + E+ L IF + + ++DINDN P F   ++ +KIGE T PG
Sbjct: 90  IDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPG 149

Query: 150 TRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQ 209
           T FP+  A D DVG NSLQ Y L+ N+YF LA     +G KYPEL+L+ +LDRE+  +HQ
Sbjct: 150 TTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQ 209

Query: 210 LVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDP 269
           LVL A DGGDP  SG   I++ V DANDNPP+F+Q  YRV++ E+VP G  +L V ATD 
Sbjct: 210 LVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDR 269

Query: 270 DEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLS 329
           DEG NA+++Y    +  ++   F+LN  +GE++    LD+E A  Y + IEA+D   L +
Sbjct: 270 DEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAA 329

Query: 330 RAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGN 389
              I V +LD ND APE+ +TS+++ +PE+   G  IALI   DRDSG+NG+V   VLGN
Sbjct: 330 HCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGN 389

Query: 390 LPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNP 449
             F L+ S   YY+LVT  +LDRE+I EYN+++ A+DGG PPLS+   +TLH+ D+NDN 
Sbjct: 390 AKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNA 449

Query: 450 PTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSINS 509
           P F   SY  ++ ENNP GASI  ++A DPD   + +++Y++    L+   + S+VS+++
Sbjct: 450 PVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVSA 509

Query: 510 NTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPALPT 569
            +GV++A R+FD+EQ R  +L + A D G+P LS+NVSL + V D NDNAP +LYPAL  
Sbjct: 510 QSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGP 569

Query: 570 DGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTA 629
           DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEPGLFS+GL TGEVRTA
Sbjct: 570 DGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 630 RALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDL 689
           RAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L DL      + P  + L
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPSDP-QAKL 688

Query: 690 TLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTPG 737
             YLVVA+A +S +F   VI+ ++LRLR   +S        GL+S PG
Sbjct: 689 QFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPG 736


>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score =  672 bits (1733), Expect = 0.0
 Identities = 344/704 (48%), Positives = 471/704 (66%), Gaps = 7/704 (0%)

Query: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
           L   LL   C     QIRY + EE+ KGS VGN+A DLG   +EL  R +R+ S      
Sbjct: 17  LFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPY 74

Query: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
           F+++ +SG L+ + R+DREE+C + P C ++   + E+ L  + V +EI+DIND+ P F 
Sbjct: 75  FTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFT 134

Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
               E++I E   PGTRF ++ A D D+G+NSLQ YKLS N  FSL +    +G+KYPEL
Sbjct: 135 QNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPEL 194

Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
            LE+ LDRE++  H+LVL A DGG P  SG   +++ V DANDNPP+F +  YRVS+ EN
Sbjct: 195 ALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLREN 254

Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
           VP GT +L V+ATD DEG N++++Y   +      +IF LNS SGE++  K LD+E+   
Sbjct: 255 VPPGTTVLQVSATDQDEGINSEITYSFYRT----GQIFSLNSKSGEITTQKKLDFEETKE 310

Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
           Y + +E +DG GL+++  + + + D NDN+PE+T  SL   + E    G  IALI +HD+
Sbjct: 311 YSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQ 370

Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
           DSG+NG+V   + G +PFK+  S    Y+LVT  +LDREQ  EYN+++ A+D G PPLS+
Sbjct: 371 DSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSS 430

Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
              + LH+ D+NDN P F   SY   +PENNP GASI  V A D D   N +++Y++   
Sbjct: 431 SISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMAS 490

Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
            L+   L+S+VS+++ +GV++A R+FDYEQ R  +L + A D G+P LS+NVSL + V D
Sbjct: 491 DLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGD 550

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           +NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 551 RNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L D
Sbjct: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 670

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718
           +    P      ++L  YLVVA+A +S +FL  VI+ +ALRLRR
Sbjct: 671 ITD-RPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRR 713


>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  672 bits (1733), Expect = 0.0
 Identities = 344/704 (48%), Positives = 471/704 (66%), Gaps = 7/704 (0%)

Query: 15  LLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIVSRGRTQL 74
           L   LL   C     QIRY + EE+ KGS VGN+A DLG   +EL  R +R+ S      
Sbjct: 17  LFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRVSSE--KPY 74

Query: 75  FSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDINDNAPNFP 134
           F+++ +SG L+ + R+DREE+C + P C ++   + E+ L  + V +EI+DIND+ P F 
Sbjct: 75  FTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKFT 134

Query: 135 TEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPEL 194
               E++I E   PGTRF ++ A D D+G+NSLQ YKLS N  FSL +    +G+KYPEL
Sbjct: 135 QNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPEL 194

Query: 195 VLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWEN 254
            LE+ LDRE++  H+LVL A DGG P  SG   +++ V DANDNPP+F +  YRVS+ EN
Sbjct: 195 ALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLREN 254

Query: 255 VPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMF 314
           VP GT +L V+ATD DEG N++++Y   +      +IF LNS SGE++  K LD+E+   
Sbjct: 255 VPPGTTVLQVSATDQDEGINSEITYSFYRT----GQIFSLNSKSGEITTQKKLDFEETKE 310

Query: 315 YEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDR 374
           Y + +E +DG GL+++  + + + D NDN+PE+T  SL   + E    G  IALI +HD+
Sbjct: 311 YSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQ 370

Query: 375 DSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLST 434
           DSG+NG+V   + G +PFK+  S    Y+LVT  +LDREQ  EYN+++ A+D G PPLS+
Sbjct: 371 DSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSS 430

Query: 435 ETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTED 494
              + LH+ D+NDN P F   SY   +PENNP GASI  V A D D   N +++Y++   
Sbjct: 431 SISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMAS 490

Query: 495 TLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLD 554
            L+   L+S+VS+++ +GV++A R+FDYEQ R  +L + A D G+P LS+NVSL + V D
Sbjct: 491 DLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGD 550

Query: 555 QNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEP 614
           +NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASEP
Sbjct: 551 RNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEP 610

Query: 615 GLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILAD 674
           GLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD + ++L D
Sbjct: 611 GLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPD 670

Query: 675 LGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718
           +    P      ++L  YLVVA+A +S +FL  VI+ +ALRLRR
Sbjct: 671 ITD-RPVPSDPQAELQFYLVVALALISVLFLLAVILAVALRLRR 713


>gi|11128029 protocadherin gamma subfamily B, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 930

 Score =  666 bits (1718), Expect = 0.0
 Identities = 348/711 (48%), Positives = 476/711 (66%), Gaps = 3/711 (0%)

Query: 8   RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67
           R G    L   LL     T S  IRYS+ EEL KGS VGN+A DLGL   +++ R +R+ 
Sbjct: 10  RAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARKLRVS 69

Query: 68  SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127
           +      FS++ +SG L+   RIDRE++C +   C +++  +VE+ L IF V + I+D+N
Sbjct: 70  AEKLH--FSVDAESGDLLVKNRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVN 127

Query: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187
           D+AP F  +E+ ++I E    GTR  +  A DPD+ INS+++YK++ N YFSL V   S+
Sbjct: 128 DHAPQFDKKEIHLEIFESASAGTRLSLDPATDPDININSIKDYKINSNPYFSLMVRVNSD 187

Query: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247
           G KYPEL LE+ LDRE++  H L+L A DGGDP  S   HI++ V D NDNPP+F++ EY
Sbjct: 188 GGKYPELSLEKLLDREEQRSHSLILTALDGGDPPRSATAHIEISVKDTNDNPPVFSRDEY 247

Query: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307
           R+S+ EN+P G+ +L V ATD DEG NA+++Y           +F L+  +G +   +S 
Sbjct: 248 RISLSENLPPGSPVLQVTATDQDEGVNAEINYYFRSTAQSTKHMFSLDEKTGMIKNNQSF 307

Query: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367
           D+ED   Y +++EA+DG GL ++ K+++ +LD NDN+PEI ITSL+  + E    G  +A
Sbjct: 308 DFEDVERYTMEVEAKDGGGLSTQCKVIIEILDENDNSPEIIITSLSDQILENSPPGMVVA 367

Query: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427
           L    D D G NG+V   +  ++PFK+  S + YY+LVT  +LDREQ  EYN+++ A+D 
Sbjct: 368 LFKTRDLDFGGNGEVRCNIETDIPFKIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDR 427

Query: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487
           G PPLS+   ITL+V DINDN P F   SY  ++ ENNP GASI  V+A DPD   N  I
Sbjct: 428 GKPPLSSSRSITLYVADINDNAPVFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHI 487

Query: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547
           +Y++    L+   +SS+VS+++ +GV++A R+FD+EQ R   L + A D G+P LS+NVS
Sbjct: 488 SYSIVASDLEPLAVSSYVSVSAQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVS 547

Query: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           L + V D+NDNAP +LYPAL  DGS   ++ PRSAEPGYLVTKVVAVD DSG NAWLSY 
Sbjct: 548 LRVLVGDRNDNAPRVLYPALGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYH 607

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667
           +L+ASEPGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  AD 
Sbjct: 608 VLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADN 667

Query: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718
           + +IL DL S  P      ++L  YLVVA+A +S +FL  VI+ +ALRLRR
Sbjct: 668 LQEILPDL-SDRPVLSDPQAELQFYLVVALALISVLFLLAVILAIALRLRR 717


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.135    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,091,446
Number of Sequences: 37866
Number of extensions: 1391680
Number of successful extensions: 10259
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 3057
Number of HSP's gapped (non-prelim): 659
length of query: 829
length of database: 18,247,518
effective HSP length: 111
effective length of query: 718
effective length of database: 14,044,392
effective search space: 10083873456
effective search space used: 10083873456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.