Search of human proteins with 14196457

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14196457 protocadherin gamma subfamily A, 12 isoform 2
precursor [Homo sapiens]
         (820 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precur...  1610   0.0  
gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precurs...  1586   0.0  
gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precur...  1169   0.0  
gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precur...  1164   0.0  
gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precur...  1152   0.0  
gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precur...  1152   0.0  
gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precurs...  1128   0.0  
gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precurs...  1122   0.0  
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs...  1121   0.0  
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs...  1121   0.0  
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs...  1118   0.0  
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs...  1118   0.0  
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs...  1117   0.0  
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...  1116   0.0  
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...  1116   0.0  
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs...  1115   0.0  
gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precurso...  1107   0.0  
gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precurs...  1107   0.0  
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs...  1103   0.0  
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs...  1103   0.0  
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs...  1103   0.0  
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs...  1095   0.0  
gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precurs...  1087   0.0  
gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precurs...  1086   0.0  
gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precur...   865   0.0  
gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precurs...   714   0.0  
gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precurs...   714   0.0  
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs...   687   0.0  
gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precurs...   687   0.0  
gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precurs...   687   0.0  

>gi|14196457 protocadherin gamma subfamily A, 12 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1610 bits (4169), Expect = 0.0
 Identities = 820/820 (100%), Positives = 820/820 (100%)

Query: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
           MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA
Sbjct: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60

Query: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
           ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE
Sbjct: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120

Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
           VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180

Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
           IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240

Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
           AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300

Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
           ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360

Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
           PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420

Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
           TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480

Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
           CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
           TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720

Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
           KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780

Query: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEVSLYQIFFLFFF 820
           SQESFEKSEPLLLSGDSVFSKDSHGLIEVSLYQIFFLFFF
Sbjct: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEVSLYQIFFLFFF 820


>gi|8850232 protocadherin gamma subfamily A, 12 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1586 bits (4107), Expect = 0.0
 Identities = 808/808 (100%), Positives = 808/808 (100%)

Query: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
           MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA
Sbjct: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60

Query: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
           ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE
Sbjct: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120

Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
           VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL
Sbjct: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180

Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
           IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP
Sbjct: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240

Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
           AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT
Sbjct: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300

Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
           ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS
Sbjct: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360

Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
           PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI
Sbjct: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420

Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
           TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD
Sbjct: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480

Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
           CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP
Sbjct: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
           TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH
Sbjct: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720

Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
           KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV
Sbjct: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780

Query: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIE 808
           SQESFEKSEPLLLSGDSVFSKDSHGLIE
Sbjct: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIE 808


>gi|14196448 protocadherin gamma subfamily A, 10 isoform 2 precursor
           [Homo sapiens]
          Length = 850

 Score = 1169 bits (3023), Expect = 0.0
 Identities = 600/808 (74%), Positives = 669/808 (82%)

Query: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
           +D  GLVLL +  G  WE G  QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 12  KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71

Query: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
            RGRTQLF+LNPRSGSL+TAGRIDREELC  + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 72  SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131

Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
           DNAP F+   L++KI+EN A  MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191

Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
           G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT  + V V DANDNAP F  PEY
Sbjct: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251

Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
           R SVPENL +GTQLL V ATD DEG N EV YSFR + D     F+L+  +G I     L
Sbjct: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311

Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
           D+EE+GFY++E+QA D   Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371

Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
           LLNV+D DSE+NGQV C I   LPFKLEKS  +YY LV    LDREQV SYNITVTATD 
Sbjct: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431

Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
           G+PPLSTE H  L VAD NDNPP F Q SY  YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491

Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
            YSLAE+TIQG  LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551

Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
           LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671

Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
           IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731

Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
           SGGGLTG   SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791

Query: 788 SEPLLLSGDSVFSKDSHGLIEVSLYQIF 815
           ++PL L  DS F  +   L+ VS   IF
Sbjct: 792 NDPLSLLDDSKFPIEDTPLVPVSFIFIF 819


>gi|11128041 protocadherin gamma subfamily A, 10 isoform 1 precursor
           [Homo sapiens]
          Length = 936

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 596/800 (74%), Positives = 665/800 (83%)

Query: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
           +D  GLVLL +  G  WE G  QI YS+PEELEKGS VG+IS+DLGL PRELAERGVRI+
Sbjct: 12  KDCSGLVLLCLFFGIPWEAGARQISYSIPEELEKGSFVGNISKDLGLAPRELAERGVRIV 71

Query: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
            RGRTQLF+LNPRSGSL+TAGRIDREELC  + +C ++ +IL+ED+VK++G+E+EV DIN
Sbjct: 72  SRGRTQLFSLNPRSGSLITAGRIDREELCAQSARCVVSFNILVEDRVKLFGIEIEVTDIN 131

Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
           DNAP F+   L++KI+EN A  MRFPLP A DPD+G NSLQSY+LSPN HFSL VQ+ A+
Sbjct: 132 DNAPKFQAENLDVKINENVAAGMRFPLPEAIDPDVGVNSLQSYQLSPNKHFSLRVQSRAN 191

Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
           G KYPELVL+ +LDREE+A HHLVLTASDGGDP+R+GT  + V V DANDNAP F  PEY
Sbjct: 192 GVKYPELVLEHSLDREEEAIHHLVLTASDGGDPLRSGTVLVSVTVFDANDNAPVFTLPEY 251

Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
           R SVPENL +GTQLL V ATD DEG N EV YSFR + D     F+L+  +G I     L
Sbjct: 252 RVSVPENLPVGTQLLTVTATDRDEGANGEVTYSFRKLPDTQLLKFQLNKYTGEIKISENL 311

Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
           D+EE+GFY++E+QA D   Y A AKVLITV DVNDN+PE+ +TSL S V E+SP GT++A
Sbjct: 312 DYEETGFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPELTITSLFSPVTEDSPLGTVVA 371

Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
           LLNV+D DSE+NGQV C I   LPFKLEKS  +YY LV    LDREQV SYNITVTATD 
Sbjct: 372 LLNVHDLDSEQNGQVTCSILAYLPFKLEKSIDSYYRLVIHRALDREQVSSYNITVTATDG 431

Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
           G+PPLSTE H  L VAD NDNPP F Q SY  YIPENN RG S+ SVTA DPD +ENAQI
Sbjct: 432 GSPPLSTEAHFMLQVADINDNPPTFSQVSYFTYIPENNARGASIFSVTALDPDSKENAQI 491

Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
            YSLAE+TIQG  LSSY+SINSDTGVLYAL SFDYEQF +LQ++V A D+G PPLSSNVS
Sbjct: 492 IYSLAEDTIQGVPLSSYISINSDTGVLYALRSFDYEQFHELQMQVTASDSGDPPLSSNVS 551

Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 552 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 611

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
           LLKASEPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS
Sbjct: 612 LLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 671

Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
           IPQVLADLGS ESPANSETSDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQA
Sbjct: 672 IPQVLADLGSFESPANSETSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQA 731

Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
           SGGGLTG   SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 732 SGGGLTGVSGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 791

Query: 788 SEPLLLSGDSVFSKDSHGLI 807
           ++PL L  DS F  +   L+
Sbjct: 792 NDPLSLLDDSKFPIEDTPLV 811


>gi|14196451 protocadherin gamma subfamily A, 11 isoform 2 precursor
           [Homo sapiens]
          Length = 837

 Score = 1152 bits (2979), Expect = 0.0
 Identities = 581/785 (74%), Positives = 669/785 (85%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL I LGTL      QIRYSVPEE EKGS VG+IS+DLGLEPRELA+RGVRI+ RG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFA+NPRSGSL+TAGRIDREELC     C LN+++L+ED +KIYGVEVE+ DINDNAP 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+E E+EIK+SE+A    RF LP+A DPD+G NSLQSY+LSPN +FSL ++   DG+K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+ +LDRE++AAH L+LTA DGGDP+R G   IRV+VLD ND+ P F Q  YR SVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN++ GT++L+VNATDPDEG+N EV YSFR ++ KA+++F+LD  +G +   G LD E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+Q  D  G      +LITV+DVNDNAPE+ +TS  +S+ ENSP GT+IALLNV 
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS ENGQV CFI  +LPFKLEK+YGNYY L+T  VLDRE V SYNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           S ETH+ LNVAD NDNPPVFP +SYSAYIPENNPRG S+ SVTA DPD ++NA +TYSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           ++T+QG  LSSYVSINS+TGVLYAL SFDYEQFRDL+++V+ARD+G PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLES ANSETSDL+LYLVVAVAAVSC+FL FVI+LLALRL RWHKSRLLQAS GGL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G P SHFVGVDGVQAFLQTYSHEVSL  DS+KSHLIFPQPNY D L+SQES EKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793

Query: 793 LSGDS 797
           ++ DS
Sbjct: 794 IAEDS 798


>gi|11128039 protocadherin gamma subfamily A, 11 isoform 1 precursor
           [Homo sapiens]
          Length = 935

 Score = 1152 bits (2979), Expect = 0.0
 Identities = 581/785 (74%), Positives = 669/785 (85%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL I LGTL      QIRYSVPEE EKGS VG+IS+DLGLEPRELA+RGVRI+ RG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFA+NPRSGSL+TAGRIDREELC     C LN+++L+ED +KIYGVEVE+ DINDNAP 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+E E+EIK+SE+A    RF LP+A DPD+G NSLQSY+LSPN +FSL ++   DG+K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+ +LDRE++AAH L+LTA DGGDP+R G   IRV+VLD ND+ P F Q  YR SVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN++ GT++L+VNATDPDEG+N EV YSFR ++ KA+++F+LD  +G +   G LD E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+Q  D  G      +LITV+DVNDNAPE+ +TS  +S+ ENSP GT+IALLNV 
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS ENGQV CFI  +LPFKLEK+YGNYY L+T  VLDRE V SYNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           S ETH+ LNVAD NDNPPVFP +SYSAYIPENNPRG S+ SVTA DPD ++NA +TYSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           ++T+QG  LSSYVSINS+TGVLYAL SFDYEQFRDL+++V+ARD+G PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLF+VG HTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 614 EPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 673

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLES ANSETSDL+LYLVVAVAAVSC+FL FVI+LLALRL RWHKSRLLQAS GGL
Sbjct: 674 ADLGSLESLANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGL 733

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G P SHFVGVDGVQAFLQTYSHEVSL  DS+KSHLIFPQPNY D L+SQES EKSEPLL
Sbjct: 734 AGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLL 793

Query: 793 LSGDS 797
           ++ DS
Sbjct: 794 IAEDS 798


>gi|14196465 protocadherin gamma subfamily A, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 829

 Score = 1128 bits (2917), Expect = 0.0
 Identities = 576/805 (71%), Positives = 666/805 (82%)

Query: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
           R+ +GL LL  LLGTL ETG  QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8   RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67

Query: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
            RGRTQLF+LNP+SGSLVTA RIDREELC     C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68  SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127

Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
           DNAP F   ELEIKI E      RFP+  A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187

Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
           G+KYPELVL+RALDRE+K  H LVL ASDGGDPV +G   I+V+VLDANDN P F QPEY
Sbjct: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247

Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
           R SV EN+ +GT+LL VNATDPDEG NA+V Y    +  K A++F L+  SG +S +  L
Sbjct: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307

Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
           D+E++ FY+++++A D  G  +RAK+L+TVLDVNDNAPE+ +TSL SSVPE    G  IA
Sbjct: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367

Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
           L++V+D+DS +NGQV  F+ GNLPFKLEKS   YY LVT   LDREQ+  YNI++ A+D 
Sbjct: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427

Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
           G+PPLSTETHI+L+V D NDNPP FP  SYSAYIPENNPRG S+ SVTA DPD   NA+I
Sbjct: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487

Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
           TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547

Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
           LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667

Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
           IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727

Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
           SGGGL   P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787

Query: 788 SEPLLLSGDSVFSKDSHGLIEVSLY 812
           SEPLL++ D +  K    L++VSL+
Sbjct: 788 SEPLLITQDLLEMKGDSNLLQVSLF 812


>gi|14589880 protocadherin gamma subfamily A, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1122 bits (2902), Expect = 0.0
 Identities = 573/801 (71%), Positives = 662/801 (82%)

Query: 8   RDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRII 67
           R+ +GL LL  LLGTL ETG  QIRYSV EEL+KGS VG+I+ DLGLEPRELAERGVRI+
Sbjct: 8   RNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFVGNIANDLGLEPRELAERGVRIV 67

Query: 68  PRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIN 127
            RGRTQLF+LNP+SGSLVTA RIDREELC     C + ++IL+EDK+KI+ VE+E++DIN
Sbjct: 68  SRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLCLVKINILVEDKLKIFEVEIEIKDIN 127

Query: 128 DNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGAD 187
           DNAP F   ELEIKI E      RFP+  A+DPD+G NSLQ+Y+LSPN +FSL V + ++
Sbjct: 128 DNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPDVGINSLQNYKLSPNDYFSLAVNSVSE 187

Query: 188 GSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEY 247
           G+KYPELVL+RALDRE+K  H LVL ASDGGDPV +G   I+V+VLDANDN P F QPEY
Sbjct: 188 GAKYPELVLERALDREKKEIHQLVLVASDGGDPVHSGNLHIQVIVLDANDNPPMFTQPEY 247

Query: 248 RASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGEL 307
           R SV EN+ +GT+LL VNATDPDEG NA+V Y    +  K A++F L+  SG +S +  L
Sbjct: 248 RVSVWENVPVGTRLLTVNATDPDEGFNAQVSYILDKMPGKIAEIFHLNSVSGEVSILKSL 307

Query: 308 DHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIA 367
           D+E++ FY+++++A D  G  +RAK+L+TVLDVNDNAPE+ +TSL SSVPE    G  IA
Sbjct: 308 DYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEITITSLTSSVPEEGTVGREIA 367

Query: 368 LLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDR 427
           L++V+D+DS +NGQV  F+ GNLPFKLEKS   YY LVT   LDREQ+  YNI++ A+D 
Sbjct: 368 LIDVHDRDSGQNGQVEVFVLGNLPFKLEKSIDQYYRLVTATSLDREQISEYNISLRASDG 427

Query: 428 GTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQI 487
           G+PPLSTETHI+L+V D NDNPP FP  SYSAYIPENNPRG S+ SVTA DPD   NA+I
Sbjct: 428 GSPPLSTETHITLHVIDINDNPPTFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARI 487

Query: 488 TYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVS 547
           TY+L E+T+QGA LSS+VSINS+TGVLYAL SFDYEQFRDL++ V A D+G+PPLSSNVS
Sbjct: 488 TYALTEDTLQGAPLSSFVSINSNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVS 547

Query: 548 LSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607
           L+LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR
Sbjct: 548 LNLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYR 607

Query: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADS 667
           LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD 
Sbjct: 608 LLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADR 667

Query: 668 IPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQA 727
           IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRLRRWHKSRLLQA
Sbjct: 668 IPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQA 727

Query: 728 SGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
           SGGGL   P SHFVG DGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 728 SGGGLASTPGSHFVGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787

Query: 788 SEPLLLSGDSVFSKDSHGLIE 808
           SEPLL++ D +  K    L++
Sbjct: 788 SEPLLITQDLLEMKGDSNLLQ 808


>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 817

 Score = 1121 bits (2900), Expect = 0.0
 Identities = 574/802 (71%), Positives = 657/802 (81%)

Query: 9   DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
           DY+G  LL ILLGT WE    +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII 
Sbjct: 9   DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68

Query: 69  RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
           RGRTQLFALN RSGSLVTAGRIDREE+C  + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69  RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128

Query: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
           N P F   E+ +KI EN A  +RFPL  A DPD+G NSLQSY+LSPN HFSL VQ+G D 
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188

Query: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
           +KYPELVL+R LDREE+  HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248

Query: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
            +VPEN+ +GT+LL V+A D DEGVN EV YSFR +  K  ++F L+  +G IST+  LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308

Query: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
           +EE+ FY+MEVQA D  G   +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368

Query: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
             + D+DS +NG+V C I  NLPFKLEKS  NYY LVT   LDRE +  YNIT+ ATD G
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428

Query: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
           TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+  VTA D D E+NAQIT
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488

Query: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
           YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548

Query: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
           SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608

Query: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
           LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668

Query: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
           P+VLADLGSLE        DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728

Query: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
            GGL   P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788

Query: 789 EPLLLSGDSVFSKDSHGLIEVS 810
           + LL S D    K++   I+VS
Sbjct: 789 DSLLTSVDFQECKENLPSIQVS 810


>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
           [Homo sapiens]
          Length = 818

 Score = 1121 bits (2899), Expect = 0.0
 Identities = 576/812 (70%), Positives = 662/812 (81%)

Query: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
           M P + H      VLL  LLGTLW     QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
           E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC  + +C ++ +IL+EDK+ +Y VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
           VE+ DINDN P F + ELE+KI ENAA   RFPL   +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
            VQ+ A G KYPELVL+  LDRE +A + LVLTA DGGDPVR+  A+I V VLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
            F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF  + +K +Q+F L+  +G 
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
           IST   LD+E+S FY++ V+A D  G   RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
           P GT+IAL  V D+DS  NG V C I  +LPF+LEKS GNYY LVT+  LDRE+V  YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
           TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
            ++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
           TVAVAD IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
           KSRLLQASGGGL   P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESFEKSEPLLLSGDSVFSKDSHGLIEVSLY 812
           +QES+EKSEPLL++ D + +K     ++VS +
Sbjct: 781 NQESYEKSEPLLITQDLLETKGEPRQLQVSFF 812


>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1118 bits (2893), Expect = 0.0
 Identities = 570/788 (72%), Positives = 650/788 (82%)

Query: 9   DYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIP 68
           DY+G  LL ILLGT WE    +I YSV EE +KGS VGDI++DLGLEPRELAERGVRII 
Sbjct: 9   DYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIIS 68

Query: 69  RGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDIND 128
           RGRTQLFALN RSGSLVTAGRIDREE+C  + +C +N +ILMEDK+ +Y ++VE+ DIND
Sbjct: 69  RGRTQLFALNQRSGSLVTAGRIDREEICAQSARCLVNFNILMEDKMNLYPIDVEIIDIND 128

Query: 129 NAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADG 188
           N P F   E+ +KI EN A  +RFPL  A DPD+G NSLQSY+LSPN HFSL VQ+G D 
Sbjct: 129 NVPRFLTEEINVKIMENTAPGVRFPLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDE 188

Query: 189 SKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYR 248
           +KYPELVL+R LDREE+  HHLVLTASDGGDP R+ TA I+V V+D ND+ P F+ P+Y+
Sbjct: 189 TKYPELVLERVLDREEERVHHLVLTASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQ 248

Query: 249 ASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELD 308
            +VPEN+ +GT+LL V+A D DEGVN EV YSFR +  K  ++F L+  +G IST+  LD
Sbjct: 249 VTVPENVPVGTRLLTVHAIDLDEGVNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLD 308

Query: 309 HEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIAL 368
           +EE+ FY+MEVQA D  G   +AKVLITVLDVNDNAPEV +TSL+SS+PE++P GT+IAL
Sbjct: 309 YEETAFYEMEVQAQDGPGSLTKAKVLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIAL 368

Query: 369 LNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRG 428
             + D+DS +NG+V C I  NLPFKLEKS  NYY LVT   LDRE +  YNIT+ ATD G
Sbjct: 369 FYLQDRDSGKNGEVTCTIPENLPFKLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGG 428

Query: 429 TPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQIT 488
           TPPLS ETHI + VADTNDNPP FP +SYS YI ENNPRG S+  VTA D D E+NAQIT
Sbjct: 429 TPPLSRETHIFMQVADTNDNPPTFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQIT 488

Query: 489 YSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSL 548
           YSLAE+TIQGA +SSYVSINSDTGVLYAL SFDYEQ R+LQ++V A D+G PPLSSN+SL
Sbjct: 489 YSLAEDTIQGAPVSSYVSINSDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSL 548

Query: 549 SLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
           SLFVLDQNDN PEILYPALPTDGSTG+ELAPRSAEPGYLVTKVVAVD+DSGQNAWLSY L
Sbjct: 549 SLFVLDQNDNPPEILYPALPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLL 608

Query: 609 LKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668
           LKASEPGLF+VGL+TGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI
Sbjct: 609 LKASEPGLFAVGLYTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSI 668

Query: 669 PQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQAS 728
           P+VLADLGSLE        DLTLYLVVAVA VSCVFLAFV++LLALRLRRWHKSRLLQAS
Sbjct: 669 PEVLADLGSLEPSDGPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQAS 728

Query: 729 GGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKS 788
            GGL   P SHFVG+DGVQAFLQTYSHEVSLT DSRKSHLIFPQPNY DML+SQES EK+
Sbjct: 729 EGGLANVPTSHFVGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKN 788

Query: 789 EPLLLSGD 796
           + LL S D
Sbjct: 789 DSLLTSVD 796


>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 574/801 (71%), Positives = 657/801 (82%)

Query: 1   MIPARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELA 60
           M P + H      VLL  LLGTLW     QIRYS+PEELEKGS VG+I +DLGLEP+ELA
Sbjct: 1   MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA 60

Query: 61  ERGVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVE 120
           E GVRI+ RGR QLF+LNPR+GSLVTAGRIDREELC  + +C ++ +IL+EDK+ +Y VE
Sbjct: 61  EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE 120

Query: 121 VEVRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSL 180
           VE+ DINDN P F + ELE+KI ENAA   RFPL   +DPD+G NSLQ ++LS N+HFS+
Sbjct: 121 VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV 180

Query: 181 IVQNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAP 240
            VQ+ A G KYPELVL+  LDRE +A + LVLTA DGGDPVR+  A+I V VLD NDN P
Sbjct: 181 DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP 240

Query: 241 AFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGT 300
            F QP YR SVPENL +GT +L V ATD DEGV+ EV YSF  + +K +Q+F L+  +G 
Sbjct: 241 MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300

Query: 301 ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENS 360
           IST   LD+E+S FY++ V+A D  G   RAKVLIT+LDVNDN PEVV+TS + ++ E++
Sbjct: 301 ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA 360

Query: 361 PRGTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNI 420
           P GT+IAL  V D+DS  NG V C I  +LPF+LEKS GNYY LVT+  LDRE+V  YNI
Sbjct: 361 PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI 420

Query: 421 TVTATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPD 480
           TVTATD+GTPPLSTET ISLNVADTNDNPP FP +SYS Y+ ENNPRG S+ SV A DPD
Sbjct: 421 TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD 480

Query: 481 CEENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHP 540
            ++NAQ++YSLAE+T+QGA LSSYVSINSDTG+LYAL SFDYEQ RDLQ+ V A D+G P
Sbjct: 481 VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP 540

Query: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
           PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
Sbjct: 541 PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600

Query: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
           NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660

Query: 661 TVAVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWH 720
           TVAVAD IP +LADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLALRL+RWH
Sbjct: 661 TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH 720

Query: 721 KSRLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLV 780
           KSRLLQASGGGL   P SHFVGV+GV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+
Sbjct: 721 KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI 780

Query: 781 SQESFEKSEPLLLSGDSVFSK 801
           +QES+EKSEPLL++ D + +K
Sbjct: 781 NQESYEKSEPLLITQDLLETK 801


>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
           [Homo sapiens]
          Length = 813

 Score = 1117 bits (2889), Expect = 0.0
 Identities = 573/798 (71%), Positives = 659/798 (82%), Gaps = 1/798 (0%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+L  +LLGTL E G  QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFALNPRSGSLVTAGRIDREELC  +  C +N +IL+E+K+KIYGVEVE+ DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           FR+ EL++K++ENAA   R  LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL++ LDRE++  H L+LTA DGGDPV +GT  IRV VLDANDNAP F   EY  SVP
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+ +GT+LL++ ATDPDEG+N ++ YSFR  ++K ++ F+LD N G IST+  LD+EES
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY MEV A D     A AKV++TV DVNDNAPEV+LTSL SS+ E+   GT+IAL +V+
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           D DS ENG++ C I  NLPFKLEKS  NYY L+T   LDRE+   YNIT+T  D GTPPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STE+HI L VAD NDNPP FPQASYS  + ENNPRGVS+ SVTAHDPD  +NA++TYSLA
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGS+++P + E  DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792

Query: 793 LSGDSVFSKDSHGLIEVS 810
           +S D V +      ++VS
Sbjct: 793 MS-DKVDANKEERRVQVS 809


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1116 bits (2887), Expect = 0.0
 Identities = 576/804 (71%), Positives = 659/804 (81%), Gaps = 2/804 (0%)

Query: 3   PARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAER 62
           PAR   D+  L+ + +LLG L E    QI YSV EE E+GS VG+I++DLGL PRELAER
Sbjct: 5   PAR--PDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAER 62

Query: 63  GVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVE 122
           GVRI+ RGRTQLFALNPRSG+LVTAGRIDREELC  +  C  NL+IL+ED VKI  VEVE
Sbjct: 63  GVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVE 122

Query: 123 VRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIV 182
           + D+NDN P F   + EIK++EN     RFPLP A+DPD+G NSLQ Y+L+ N +FSL V
Sbjct: 123 IIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDV 182

Query: 183 QNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAF 242
           Q+GADG KYPELVL+RALDREE+A HHLVLTA DGGDPVR+GTARI ++++D NDNAP F
Sbjct: 183 QSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVF 242

Query: 243 AQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTIS 302
            QPEY  SV EN+ +GT+LL V ATDPDEG N +V YSFR V DK +Q+F+L+  SG I+
Sbjct: 243 TQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDIT 302

Query: 303 TIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPR 362
            +G LD+E+SGFY ++V+A D  G  AR+KVL+TVLD NDNAPEV +TSL SSV E+S  
Sbjct: 303 ILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSP 362

Query: 363 GTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITV 422
           GT+IAL NV+D DS  NG V C I  NLPF LEK+YGNYY L+T   LDRE+V  YNITV
Sbjct: 363 GTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITV 422

Query: 423 TATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCE 482
           TATD+GTPPLSTETHISL V D NDNPP FP ASYSAYIPENNPRG S++S+TA DPD  
Sbjct: 423 TATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSG 482

Query: 483 ENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPL 542
           +NA+ITYSLAE+T QGA LSSYVSINS+TG+LYAL SFDYEQFRDLQ+ + A D+G PPL
Sbjct: 483 DNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPL 542

Query: 543 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 602
           SSNVSLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNA
Sbjct: 543 SSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNA 602

Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
           WLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTV
Sbjct: 603 WLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTV 662

Query: 663 AVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKS 722
           AVADSIP VLADLGSL+  A+ + S LTLYLVVAVAAVSCVFLAFV +LLAL+LRRWHKS
Sbjct: 663 AVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKS 722

Query: 723 RLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQ 782
           RLL A G  L G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIF QP+YAD L+S+
Sbjct: 723 RLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISR 782

Query: 783 ESFEKSEPLLLSGDSVFSKDSHGL 806
           ES EKSEPLL++ D + +K    L
Sbjct: 783 ESCEKSEPLLITQDLLETKGDPNL 806


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1116 bits (2887), Expect = 0.0
 Identities = 576/804 (71%), Positives = 659/804 (81%), Gaps = 2/804 (0%)

Query: 3   PARLHRDYKGLVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAER 62
           PAR   D+  L+ + +LLG L E    QI YSV EE E+GS VG+I++DLGL PRELAER
Sbjct: 5   PAR--PDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAER 62

Query: 63  GVRIIPRGRTQLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVE 122
           GVRI+ RGRTQLFALNPRSG+LVTAGRIDREELC  +  C  NL+IL+ED VKI  VEVE
Sbjct: 63  GVRIVSRGRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVE 122

Query: 123 VRDINDNAPYFRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIV 182
           + D+NDN P F   + EIK++EN     RFPLP A+DPD+G NSLQ Y+L+ N +FSL V
Sbjct: 123 IIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQGYQLNSNGYFSLDV 182

Query: 183 QNGADGSKYPELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAF 242
           Q+GADG KYPELVL+RALDREE+A HHLVLTA DGGDPVR+GTARI ++++D NDNAP F
Sbjct: 183 QSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVF 242

Query: 243 AQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTIS 302
            QPEY  SV EN+ +GT+LL V ATDPDEG N +V YSFR V DK +Q+F+L+  SG I+
Sbjct: 243 TQPEYHVSVRENVPVGTRLLTVKATDPDEGANGDVTYSFRKVRDKISQLFQLNSLSGDIT 302

Query: 303 TIGELDHEESGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPR 362
            +G LD+E+SGFY ++V+A D  G  AR+KVL+TVLD NDNAPEV +TSL SSV E+S  
Sbjct: 303 ILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSP 362

Query: 363 GTLIALLNVNDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITV 422
           GT+IAL NV+D DS  NG V C I  NLPF LEK+YGNYY L+T   LDRE+V  YNITV
Sbjct: 363 GTVIALFNVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITV 422

Query: 423 TATDRGTPPLSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCE 482
           TATD+GTPPLSTETHISL V D NDNPP FP ASYSAYIPENNPRG S++S+TA DPD  
Sbjct: 423 TATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGASILSMTAQDPDSG 482

Query: 483 ENAQITYSLAENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPL 542
           +NA+ITYSLAE+T QGA LSSYVSINS+TG+LYAL SFDYEQFRDLQ+ + A D+G PPL
Sbjct: 483 DNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPL 542

Query: 543 SSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNA 602
           SSNVSLSLFVLDQNDN PEILYP  PTDGSTGVELAPRSA+ GYLVTKVVAVDRDSGQNA
Sbjct: 543 SSNVSLSLFVLDQNDNVPEILYPTFPTDGSTGVELAPRSADSGYLVTKVVAVDRDSGQNA 602

Query: 603 WLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTV 662
           WLSY LLK+SEPGLF+VGLHTGEVRTARALLDRDALKQ LVV VQDHGQPPLSATVTLTV
Sbjct: 603 WLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTV 662

Query: 663 AVADSIPQVLADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKS 722
           AVADSIP VLADLGSL+  A+ + S LTLYLVVAVAAVSCVFLAFV +LLAL+LRRWHKS
Sbjct: 663 AVADSIPDVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKS 722

Query: 723 RLLQASGGGLTGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQ 782
           RLL A G  L G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIF QP+YAD L+S+
Sbjct: 723 RLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFSQPSYADTLISR 782

Query: 783 ESFEKSEPLLLSGDSVFSKDSHGL 806
           ES EKSEPLL++ D + +K    L
Sbjct: 783 ESCEKSEPLLITQDLLETKGDPNL 806


>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1115 bits (2885), Expect = 0.0
 Identities = 569/782 (72%), Positives = 652/782 (83%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+L  +LLGTL E G  QIRYS+PEEL+KGS VG+I++DLGLEP+ELAERGVRI+ RGRT
Sbjct: 13  LLLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFALNPRSGSLVTAGRIDREELC  +  C +N +IL+E+K+KIYGVEVE+ DINDN P 
Sbjct: 73  QLFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPR 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           FR+ EL++K++ENAA   R  LP A D D+G NSL+SY+LS N HFSL V +G DG KYP
Sbjct: 133 FRDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL++ LDRE++  H L+LTA DGGDPV +GT  IRV VLDANDNAP F   EY  SVP
Sbjct: 193 ELVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVP 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+ +GT+LL++ ATDPDEG+N ++ YSFR  ++K ++ F+LD N G IST+  LD+EES
Sbjct: 253 ENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEES 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY MEV A D     A AKV++TV DVNDNAPEV+LTSL SS+ E+   GT+IAL +V+
Sbjct: 313 RFYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           D DS ENG++ C I  NLPFKLEKS  NYY L+T   LDRE+   YNIT+T  D GTPPL
Sbjct: 373 DGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STE+HI L VAD NDNPP FPQASYS  + ENNPRGVS+ SVTAHDPD  +NA++TYSLA
Sbjct: 433 STESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLA 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+T QGA LSSYVSINSDTGVLYAL SFDYEQ RDLQ+ V A D+G+PPLSSNVSLSLFV
Sbjct: 493 EDTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDN PEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLF+VGLHTGEVRTARALLDRDALKQSLVVAV+DHGQPPLSAT T+TVAVAD IP +L
Sbjct: 613 EPGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGS+++P + E  DLTLYLVVAVAAVSCVFLAFVI+LL LRLRRWHKSRLLQA G  L
Sbjct: 673 ADLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G PASHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+S+ES EKSEPLL
Sbjct: 733 AGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLL 792

Query: 793 LS 794
           +S
Sbjct: 793 MS 794


>gi|7662056 protocadherin gamma subfamily A, 8 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 570/801 (71%), Positives = 655/801 (81%), Gaps = 2/801 (0%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL  LLGTLWE G  QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFALNPRSGSL+TAGRIDREELC  + +C +N++ L+EDK K++GVE+E+ DINDN P 
Sbjct: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+  +LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F  P YR  V 
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+  GT+LL V A+DPDEG+N +V Y FR +++K   +F+L+ N+G IS    LD+EE 
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+QA D      R K+LI+V DVNDN PEV++TSL S V ENS  GT+IA L+V+
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT   LDRE V  YNITV A+D GTPPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+ 
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
            +LGSL+   +   S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE  EK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792

Query: 793 LSGD--SVFSKDSHGLIEVSL 811
            S D     ++  HG + + L
Sbjct: 793 TSVDFHEYKNEADHGQVSLVL 813


>gi|14270484 protocadherin gamma subfamily A, 8 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1107 bits (2863), Expect = 0.0
 Identities = 567/784 (72%), Positives = 648/784 (82%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL  LLGTLWE G  QIRYSVPEE +KGS VG+IS+DLGL+PR+LA+ GVRI+ RGRT
Sbjct: 13  LILLCALLGTLWEIGRGQIRYSVPEETDKGSFVGNISKDLGLDPRKLAKHGVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFALNPRSGSL+TAGRIDREELC  + +C +N++ L+EDK K++GVE+E+ DINDN P 
Sbjct: 73  QLFALNPRSGSLITAGRIDREELCAQSPRCLININTLVEDKGKLFGVEIEIIDINDNNPK 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+  +LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FQVEDLEVKINEIAVPGARYPLPEAVDPDVGVNSLQSYQLSPNHHFSLDVQTGDNGAINP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+RALDREE+AAHHLVLTASDGG P R+ T RI V VLD NDNAP F  P YR  V 
Sbjct: 193 ELVLERALDREEEAAHHLVLTASDGGKPPRSSTVRIHVTVLDTNDNAPVFPHPIYRVKVL 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+  GT+LL V A+DPDEG+N +V Y FR +++K   +F+L+ N+G IS    LD+EE 
Sbjct: 253 ENMPPGTRLLTVTASDPDEGINGKVAYKFRKINEKQTPLFQLNENTGEISIAKSLDYEEC 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+QA D      R K+LI+V DVNDN PEV++TSL S V ENS  GT+IA L+V+
Sbjct: 313 SFYEMEIQAEDVGALLGRTKLLISVEDVNDNRPEVIITSLFSPVLENSLPGTVIAFLSVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS +NGQV+C+ + NLPFKLEKS GNYY LVT   LDRE V  YNITV A+D GTPPL
Sbjct: 373 DQDSGKNGQVVCYTRDNLPFKLEKSIGNYYRLVTRKYLDRENVSIYNITVMASDLGTPPL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STET I+L+VAD NDNPP FP ASYSAYI ENN RG S+ S+TAHDPD +ENAQ+TYS+ 
Sbjct: 433 STETQIALHVADINDNPPTFPHASYSAYILENNLRGASIFSLTAHDPDSQENAQVTYSVT 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQ+ V A D+G PPLSSN+SLSLFV
Sbjct: 493 EDTLQGAPLSSYISINSDTGVLYALQSFDYEQIRDLQLLVTASDSGDPPLSSNMSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAE GYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAERGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIP+VL
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
            +LGSL+   +   S LTLYLVVAVAA+SCVFLAFV +LL LRLRRWHKSRLLQ SGG L
Sbjct: 673 TELGSLKPSVDPNDSSLTLYLVVAVAAISCVFLAFVAVLLGLRLRRWHKSRLLQDSGGRL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G PASHFVGV+ VQAFLQTYS EVSLT DSRKSHLIFPQPNYADML+SQE  EK++ LL
Sbjct: 733 VGVPASHFVGVEEVQAFLQTYSQEVSLTADSRKSHLIFPQPNYADMLISQEGCEKNDSLL 792

Query: 793 LSGD 796
            S D
Sbjct: 793 TSVD 796


>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
           [Homo sapiens]
          Length = 828

 Score = 1103 bits (2853), Expect = 0.0
 Identities = 566/808 (70%), Positives = 649/808 (80%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           LVLL  LLG LWE   +QIRYSVPEE EKG  VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLF+LNPRSG+LVTAGRIDREELC  + +C +N  +L+ED+VK+YG+E+EV DIND+AP 
Sbjct: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+   LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+RALDREE  AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ  YR  V 
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+  GT LL   A+D DEG+N +V Y F  +++K + +F+L+ N+G IST   LD+EE 
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+QA D  G     KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           D+DS +NGQV+C IQ NL F LE S  +YY L+T  +LDRE+   YNITVTATDRGTPPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD  EN+++ YSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL 
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792

Query: 793 LSGDSVFSKDSHGLIEVSLYQIFFLFFF 820
           +S DS F  +   L+ VS +  F  F F
Sbjct: 793 VSVDSKFPIEDTPLVPVSSFFFFLSFLF 820


>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 566/775 (73%), Positives = 636/775 (82%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL + L  L E G   I YSVPEE +KGS VG+I++DLGL+P+ELA+ GVRI+ RGR 
Sbjct: 13  LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
            LFALNPRSGSL+TA RIDREELC  ++ C ++ +IL+EDK+K++ VEVE+ DINDN P 
Sbjct: 73  PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+  ELE K++E      R  LP   D D+G NSLQSY+LS N HFSL VQ GADG ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           E+VL+  LDREE+A HHL+LTASDGG+PVR+GT RI + V+DANDN PAF Q +Y  +VP
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+ LGTQLL+VNATDPDEG N EV YSF  VD + AQ+F+LD  +G IS    LD EE 
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
             Y MEVQA D AG  A+ KVLI VLDVNDNAPEV +TS+ ++VPEN P GT+IAL++V+
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS +NG   CFI GNLPFKLEK   NYY LVT+  LDRE +  YNIT+TA D+GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STETHISL V D NDN PVF Q SYSAYIPENNPRG S+ SV AHD D  ENAQITYSL 
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+TIQGA LS+Y+SINSDTGVLYAL SFDYEQFRD+Q+KVMARD+G PPLSSNVSLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I  +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLE  A    SDLTLYLVVA AAVSCVFLAFVI+LLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
              P SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787


>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 566/775 (73%), Positives = 636/775 (82%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL + L  L E G   I YSVPEE +KGS VG+I++DLGL+P+ELA+ GVRI+ RGR 
Sbjct: 13  LMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRM 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
            LFALNPRSGSL+TA RIDREELC  ++ C ++ +IL+EDK+K++ VEVE+ DINDN P 
Sbjct: 73  PLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVEVEIIDINDNTPQ 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+  ELE K++E      R  LP   D D+G NSLQSY+LS N HFSL VQ GADG ++P
Sbjct: 133 FQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           E+VL+  LDREE+A HHL+LTASDGG+PVR+GT RI + V+DANDN PAF Q +Y  +VP
Sbjct: 193 EMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVP 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+ LGTQLL+VNATDPDEG N EV YSF  VD + AQ+F+LD  +G IS    LD EE 
Sbjct: 253 ENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEY 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
             Y MEVQA D AG  A+ KVLI VLDVNDNAPEV +TS+ ++VPEN P GT+IAL++V+
Sbjct: 313 KMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS +NG   CFI GNLPFKLEK   NYY LVT+  LDRE +  YNIT+TA D+GTP L
Sbjct: 373 DQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPAL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STETHISL V D NDN PVF Q SYSAYIPENNPRG S+ SV AHD D  ENAQITYSL 
Sbjct: 433 STETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLI 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+TIQGA LS+Y+SINSDTGVLYAL SFDYEQFRD+Q+KVMARD+G PPLSSNVSLSLF+
Sbjct: 493 EDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFL 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAP SAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVAD I  +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLE  A    SDLTLYLVVA AAVSCVFLAFVI+LLA RLRRWHKSRLLQASGGGL
Sbjct: 673 ADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEK 787
              P SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK
Sbjct: 733 ASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEK 787


>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1095 bits (2832), Expect = 0.0
 Identities = 561/795 (70%), Positives = 643/795 (80%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           LVLL  LLG LWE   +QIRYSVPEE EKG  VG+IS+DL LEPRELAER VRI+ RGRT
Sbjct: 13  LVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVSRGRT 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLF+LNPRSG+LVTAGRIDREELC  + +C +N  +L+ED+VK+YG+E+EV DIND+AP 
Sbjct: 73  QLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDINDSAPK 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+   LE+KI+E A    R+PLP A DPD+G NSLQSY+LSPN HFSL VQ G +G+  P
Sbjct: 133 FQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNGAINP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+RALDREE  AHHLVLTASDGG+P R+ T RI V VLD NDNAP FAQ  YR  V 
Sbjct: 193 ELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVL 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN+  GT LL   A+D DEG+N +V Y F  +++K + +F+L+ N+G IST   LD+EE 
Sbjct: 253 ENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEEC 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+QA D  G     KVLI+V DVNDN PEV +TSL S V E++P+GT+I L N +
Sbjct: 313 SFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           D+DS +NGQV+C IQ NL F LE S  +YY L+T  +LDRE+   YNITVTATDRGTPPL
Sbjct: 373 DRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           STE HI+L V D NDNPP F QASYS Y+PENN RG S+ SV A+DPD  EN+++ YSLA
Sbjct: 433 STEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLA 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+TIQG+ LS+YVSINSDTGVLYAL SFDYEQFRDLQ++V A D+G PPLSSNVSL LFV
Sbjct: 493 EDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL KAS
Sbjct: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVA+ADSIP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSL+ PA+ E SDLTLYLVVAVA VSCVFL FVI LLALRLR WH S LL+A+  GL
Sbjct: 673 ADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
            G P SHFVGVDGV+AFLQTYS E SLT DSRKSHLIFPQPNYAD L+SQ+S EK+EPL 
Sbjct: 733 AGVPTSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLC 792

Query: 793 LSGDSVFSKDSHGLI 807
           +S DS F  +   L+
Sbjct: 793 VSVDSKFPIEDTPLV 807


>gi|14196462 protocadherin gamma subfamily A, 2 isoform 2 precursor
           [Homo sapiens]
          Length = 823

 Score = 1087 bits (2812), Expect = 0.0
 Identities = 561/806 (69%), Positives = 645/806 (80%), Gaps = 5/806 (0%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           LVLL  LL TLWE    QIRYSV EE+++GS VG+I++DLGLEP  LAE+GVRI+ RGR+
Sbjct: 13  LVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRS 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFALNPRSGSLVTA RIDREELC  +  C LN +IL+EDK+ IY VEVE+ DINDNAP 
Sbjct: 73  QLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPR 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F   ELE+KISE      R PL +A D D+G+N+LQ Y L+PN HFSL V+ GADG+KYP
Sbjct: 133 FGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+R+LDREE+A HHLVL ASDGGDPV +GT+RI V VLDANDNAP F QPEYR S+P
Sbjct: 193 ELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIP 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN  +GT++L V ATD DEG  A+V Y       + ++VF+L   SG ++ I +LD+E++
Sbjct: 253 ENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDA 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            F++++++A D  G   RAKV++TVLDVNDNAPE  +TS  SSV E+S  GT+I L NV+
Sbjct: 313 TFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           D+DS +N    C +  +LPFKLEKS  NYY LVT   LDREQ   YNIT+TA D G P L
Sbjct: 373 DRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           ST+ HI L VAD NDN P F + SYS YIPENNPRG S+ SVTAHDPD  +NA +TYS A
Sbjct: 433 STDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFA 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQV V+ARD+G+PPLSSNVSLSLFV
Sbjct: 493 EDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLKAS
Sbjct: 553 LDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQASGG L
Sbjct: 673 ADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSEPLL 792
           TG  +SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK +  L
Sbjct: 733 TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD-FL 791

Query: 793 LSGDSVFSKDSHGLIEVSLYQIFFLF 818
            +  S+  ++     E +  Q+ +LF
Sbjct: 792 SAPQSLLEEER----EETFSQVIYLF 813


>gi|11056030 protocadherin gamma subfamily A, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 932

 Score = 1086 bits (2808), Expect = 0.0
 Identities = 555/777 (71%), Positives = 632/777 (81%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           LVLL  LL TLWE    QIRYSV EE+++GS VG+I++DLGLEP  LAE+GVRI+ RGR+
Sbjct: 13  LVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRS 72

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFALNPRSGSLVTA RIDREELC  +  C LN +IL+EDK+ IY VEVE+ DINDNAP 
Sbjct: 73  QLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPR 132

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F   ELE+KISE      R PL +A D D+G+N+LQ Y L+PN HFSL V+ GADG+KYP
Sbjct: 133 FGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYP 192

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+R+LDREE+A HHLVL ASDGGDPV +GT+RI V VLDANDNAP F QPEYR S+P
Sbjct: 193 ELVLERSLDREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIP 252

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN  +GT++L V ATD DEG  A+V Y       + ++VF+L   SG ++ I +LD+E++
Sbjct: 253 ENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDA 312

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            F++++++A D  G   RAKV++TVLDVNDNAPE  +TS  SSV E+S  GT+I L NV+
Sbjct: 313 TFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVH 372

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           D+DS +N    C +  +LPFKLEKS  NYY LVT   LDREQ   YNIT+TA D G P L
Sbjct: 373 DRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSL 432

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           ST+ HI L VAD NDN P F + SYS YIPENNPRG S+ SVTAHDPD  +NA +TYS A
Sbjct: 433 STDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFA 492

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           E+T+QGA LSSY+SINSDTGVLYAL SFDYEQ RDLQV V+ARD+G+PPLSSNVSLSLFV
Sbjct: 493 EDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFV 552

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPA PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSY LLKAS
Sbjct: 553 LDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKAS 612

Query: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVL 672
           EPGLFSVGLHTGEVRTARALLDRDALKQSLVVA+QDHGQPPLSATVTLTVAVAD IP +L
Sbjct: 613 EPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDIL 672

Query: 673 ADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           ADLGSLE  A    SDLTLYLVVAVAAVSCVFLAFVI+LLA RLRRWHKSRLLQASGG L
Sbjct: 673 ADLGSLEPSAIPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSL 732

Query: 733 TGAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIFPQPNYADMLVSQESFEKSE 789
           TG  +SHFVGVDGV+AFLQTYSHEVSLT DSRKSHLIFPQPNYAD L+SQES EK +
Sbjct: 733 TGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKD 789


>gi|14196455 protocadherin gamma subfamily A, 11 isoform 3 precursor
           [Homo sapiens]
          Length = 750

 Score =  865 bits (2236), Expect = 0.0
 Identities = 430/613 (70%), Positives = 510/613 (83%)

Query: 13  LVLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRT 72
           L+LL I LGTL      QIRYSVPEE EKGS VG+IS+DLGLEPRELA+RGVRI+ RG+T
Sbjct: 14  LLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKT 73

Query: 73  QLFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPY 132
           QLFA+NPRSGSL+TAGRIDREELC     C LN+++L+ED +KIYGVEVE+ DINDNAP 
Sbjct: 74  QLFAVNPRSGSLITAGRIDREELCETVSSCFLNMELLVEDTLKIYGVEVEIIDINDNAPS 133

Query: 133 FRESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYP 192
           F+E E+EIK+SE+A    RF LP+A DPD+G NSLQSY+LSPN +FSL ++   DG+K P
Sbjct: 134 FQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNP 193

Query: 193 ELVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVP 252
           ELVL+ +LDRE++AAH L+LTA DGGDP+R G   IRV+VLD ND+ P F Q  YR SVP
Sbjct: 194 ELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVP 253

Query: 253 ENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEES 312
           EN++ GT++L+VNATDPDEG+N EV YSFR ++ KA+++F+LD  +G +   G LD E+ 
Sbjct: 254 ENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKY 313

Query: 313 GFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVN 372
            FY+ME+Q  D  G      +LITV+DVNDNAPE+ +TS  +S+ ENSP GT+IALLNV 
Sbjct: 314 RFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQ 373

Query: 373 DQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPL 432
           DQDS ENGQV CFI  +LPFKLEK+YGNYY L+T  VLDRE V SYNIT+TATD+G+PPL
Sbjct: 374 DQDSGENGQVSCFIPNHLPFKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPL 433

Query: 433 STETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLA 492
           S ETH+ LNVAD NDNPPVFP +SYSAYIPENNPRG S+ SVTA DPD ++NA +TYSL 
Sbjct: 434 SAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLT 493

Query: 493 ENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFV 552
           ++T+QG  LSSYVSINS+TGVLYAL SFDYEQFRDL+++V+ARD+G PPLSSNVSLSLFV
Sbjct: 494 DDTVQGVPLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFV 553

Query: 553 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKAS 612
           LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVD+DSGQNAWLSYRLLKAS
Sbjct: 554 LDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKAS 613

Query: 613 EPGLFSVGLHTGE 625
           EPGLF+VG HTGE
Sbjct: 614 EPGLFAVGEHTGE 626



 Score =  150 bits (379), Expect = 5e-36
 Identities = 149/537 (27%), Positives = 223/537 (41%), Gaps = 71/537 (13%)

Query: 228 IRVMVLDANDNAPAFAQPEYRASVPENLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDK 287
           + V ++D NDNAP+F + E    V E+   G +  + NA DPD GVN+   Y        
Sbjct: 120 VEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQL-----S 174

Query: 288 AAQVFKLDCNSGT-------ISTIGELDHEESGFYQMEVQAMDNAGYSARAKVLI--TVL 338
               F L     T       +   G LD E+   + + + A+D      +  V I   VL
Sbjct: 175 PNNYFSLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVL 234

Query: 339 DVNDNAPEVVLTSLASSVPENSPRGTLIALLNVNDQDSEENGQVICFIQG-----NLPFK 393
           DVND+ P    +    SVPEN   GT + ++N  D D   NG+V+   +      +  F+
Sbjct: 235 DVNDHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQ 294

Query: 394 LEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLSTETHISLNVADTNDNPPVFP 453
           L+   G      +   LD E+   Y + +   D G   L T T + + V D NDN P   
Sbjct: 295 LDSQTGEVQVRGS---LDFEKYRFYEMEIQGQDGGG--LFTTTTMLITVVDVNDNAPEIT 349

Query: 454 QASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAENTIQGASLSSYVSINSDTGV 513
             S    I EN+P G  +  +   D D  EN Q++  +  +            +    G 
Sbjct: 350 ITSSINSILENSPPGTVIALLNVQDQDSGENGQVSCFIPNHLP--------FKLEKTYGN 401

Query: 514 LYALSS---FDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVLDQNDNAPEILYPALPTD 570
            Y L +    D E  +   + + A D G PPLS+   + L V D NDN P  ++P     
Sbjct: 402 YYKLITSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNPP--VFPH---- 455

Query: 571 GSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGL-----FSVGLHTGE 625
            S+     P +   G  +  V A+D DS QNA ++Y L   +  G+      S+  +TG 
Sbjct: 456 -SSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSINSNTGV 514

Query: 626 VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVA---DSIPQVL-------ADL 675
           +   ++          L V  +D G PPLS+ V+L++ V    D+ P++L          
Sbjct: 515 LYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGST 574

Query: 676 GSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGL 732
           G   +P ++E      YLV  V AV                  W   RLL+AS  GL
Sbjct: 575 GVELAPRSAEPG----YLVTKVVAVD----------KDSGQNAWLSYRLLKASEPGL 617


>gi|14270508 protocadherin gamma subfamily B, 7 isoform 2 precursor
           [Homo sapiens]
          Length = 808

 Score =  714 bits (1843), Expect = 0.0
 Identities = 358/705 (50%), Positives = 498/705 (70%), Gaps = 3/705 (0%)

Query: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
           VL  +LL   + T C  IRYS+PEEL KGS VG++++DLGL   +++ R +R+       
Sbjct: 16  VLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRV--SAEKL 73

Query: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
            F+++ +SG L+   RIDRE++C    +C+L L+ ++E+ + I+ V V + D+ND+AP F
Sbjct: 74  HFSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQF 133

Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
           R+ E+ ++ISE+ +  M   L  A DPDI  NSL  Y+LSPN +FSL+ ++  DG KYPE
Sbjct: 134 RKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPE 193

Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
           LVL++ LDRE ++AHHLVLTA DGGDP R+GTA+IR++V+DANDN P F+Q  YR S+ E
Sbjct: 194 LVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRE 253

Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
           ++  GT +L V ATD DEG+N+E+ YSF  V DKA  VF LD  +G I T   LD EE  
Sbjct: 254 DVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVE 313

Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
            Y + ++A D    S R KV++ V+D NDN+PE+++TSL+  + E+SP G ++AL    D
Sbjct: 314 RYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRD 373

Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
           QDS ENG+V C +   +PFK+  S  NYY LVTD  LDREQ P YN+T+ ATDRG PPLS
Sbjct: 374 QDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLS 433

Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
           +   I+L++ D NDN PVF Q++Y  ++PENN  G S+  V+A DPD   N +++YSL  
Sbjct: 434 SSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIA 493

Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
           + ++  +LSSYVS+++ +GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + V 
Sbjct: 494 SDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVG 553

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
           D+NDNAP +LYPAL  DGS   +  PR+A+PGYLVTKVVAVD DSG NAWLSY +++ASE
Sbjct: 554 DRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASE 613

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
           PGLFS+GL TGEVR  RAL D+D+++Q L+VAV+D GQPPLSAT TL +  ADS+ +VL 
Sbjct: 614 PGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 673

Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR 718
           D     +P++S+ +++  YLVVA+A +S +FL  VIL +ALRLR+
Sbjct: 674 DFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQ 717


>gi|11128027 protocadherin gamma subfamily B, 7 isoform 1 precursor
           [Homo sapiens]
          Length = 929

 Score =  714 bits (1843), Expect = 0.0
 Identities = 358/705 (50%), Positives = 498/705 (70%), Gaps = 3/705 (0%)

Query: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
           VL  +LL   + T C  IRYS+PEEL KGS VG++++DLGL   +++ R +R+       
Sbjct: 16  VLFPLLLPLFYPTLCEPIRYSIPEELAKGSVVGNLAKDLGLSVLDVSARELRV--SAEKL 73

Query: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
            F+++ +SG L+   RIDRE++C    +C+L L+ ++E+ + I+ V V + D+ND+AP F
Sbjct: 74  HFSVDAQSGDLLVKDRIDREQICKERRRCELQLEAVVENPLNIFHVIVVIEDVNDHAPQF 133

Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
           R+ E+ ++ISE+ +  M   L  A DPDI  NSL  Y+LSPN +FSL+ ++  DG KYPE
Sbjct: 134 RKDEINLEISESVSLGMGTILESAEDPDISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPE 193

Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
           LVL++ LDRE ++AHHLVLTA DGGDP R+GTA+IR++V+DANDN P F+Q  YR S+ E
Sbjct: 194 LVLQKTLDRETQSAHHLVLTALDGGDPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLRE 253

Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
           ++  GT +L V ATD DEG+N+E+ YSF  V DKA  VF LD  +G I T   LD EE  
Sbjct: 254 DVPPGTSILRVKATDQDEGINSEITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVE 313

Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
            Y + ++A D    S R KV++ V+D NDN+PE+++TSL+  + E+SP G ++AL    D
Sbjct: 314 RYTINIEAKDRGSLSTRCKVIVEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRD 373

Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
           QDS ENG+V C +   +PFK+  S  NYY LVTD  LDREQ P YN+T+ ATDRG PPLS
Sbjct: 374 QDSGENGEVRCSLSRGVPFKIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLS 433

Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
           +   I+L++ D NDN PVF Q++Y  ++PENN  G S+  V+A DPD   N +++YSL  
Sbjct: 434 SSKTITLHITDVNDNAPVFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIA 493

Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
           + ++  +LSSYVS+++ +GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + V 
Sbjct: 494 SDLESRTLSSYVSVSAQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVG 553

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
           D+NDNAP +LYPAL  DGS   +  PR+A+PGYLVTKVVAVD DSG NAWLSY +++ASE
Sbjct: 554 DRNDNAPRVLYPALGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASE 613

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
           PGLFS+GL TGEVR  RAL D+D+++Q L+VAV+D GQPPLSAT TL +  ADS+ +VL 
Sbjct: 614 PGLFSLGLRTGEVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLP 673

Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR 718
           D     +P++S+ +++  YLVVA+A +S +FL  VIL +ALRLR+
Sbjct: 674 DFSDHPTPSDSQ-AEMQFYLVVALALISVLFLLAVILAIALRLRQ 717


>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score =  687 bits (1772), Expect = 0.0
 Identities = 358/757 (47%), Positives = 498/757 (65%), Gaps = 5/757 (0%)

Query: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
           VLL  LL         QIRYS+PEEL K S VG++++DLGL  R+L  R +R+      +
Sbjct: 16  VLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRV--SAEKE 73

Query: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
            F +NP SG L+ + RIDRE++C     C L+ D + E+ + I+ + V V+DINDN P F
Sbjct: 74  YFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDINDNTPLF 133

Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
           +++++ +KI E+      FPL  A D D+G NSLQ Y L+ N +F L  +   DG KYPE
Sbjct: 134 KQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPE 193

Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
           L+LK +LDREE + H LVLTA DGGDP ++GT +IR+ V DANDN P F+Q  YR ++ E
Sbjct: 194 LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLRE 253

Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQVFKLDCNSGTISTIGELDHEESG 313
           ++  G  +L V ATD DEG+NAE+ YSF  VD++    F L+  +G I+T  +LD E + 
Sbjct: 254 DVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIAS 313

Query: 314 FYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNVND 373
            Y + ++A D    +A   + + +LD ND APEV++TS+++ +PE+SP GT+IAL+   D
Sbjct: 314 SYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRD 373

Query: 374 QDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPPLS 433
           +DS ENG+V C + GN  F L+ S  NYY LVTD  LDRE++P YN+T+TATD G PPLS
Sbjct: 374 RDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLS 433

Query: 434 TETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSLAE 493
           +   ++L+++D NDN PVF Q SY  ++ ENNP G S+  ++A DPD   + Q++YS+  
Sbjct: 434 SSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVA 493

Query: 494 NTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLFVL 553
           + ++   + SYVS+++ +GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + V 
Sbjct: 494 SDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVG 553

Query: 554 DQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613
           D NDNAP +LYPAL  DGS   ++ PR+AEPGYLVTKVVAVD DSG NAWLSY +L+ASE
Sbjct: 554 DLNDNAPRVLYPALGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASE 613

Query: 614 PGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQVLA 673
           PGLFS+GL TGEVRTARAL DRDA +Q L+VAV+D GQPPLSAT TL +  ADS+ +VL 
Sbjct: 614 PGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLP 673

Query: 674 DLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRRWHKSRLLQASGGGLT 733
           DL     P++ + + L  YLVVA+A +S +F   VIL ++LRLR   +S        GL+
Sbjct: 674 DLSDRREPSDPQ-AKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLS 732

Query: 734 GAPASHFVGVDGVQAFLQTYSHEVSLTTDSRKSHLIF 770
             P      +         YS+ + + + S K+   F
Sbjct: 733 SKPGPGV--LPNYSEGTLPYSYNLCVASQSAKTEFNF 767


>gi|14270499 protocadherin gamma subfamily B, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 803

 Score =  687 bits (1772), Expect = 0.0
 Identities = 362/707 (51%), Positives = 486/707 (68%), Gaps = 9/707 (1%)

Query: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
           VL   LL       C QIRY +PEE+ KGS VG+++ DLG   +EL  R +R+       
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--SSEKP 73

Query: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
            F ++  SG L+ + R+DREE+C     C L  + + E+ +  Y V VE+ DIND+ P F
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
            ++  E++ISE+A    RF L  A D DIG N+LQ+Y+LSP+ HFSLI +  +DGSKYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193

Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
           +VLK  LDRE++ ++HL LTA D G P  + TA+I V+V DANDNAP F+Q  YR S+ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253

Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQV--FKLDCNSGTISTIGELDHEE 311
           N+  GT +L V ATD DEGVNAE+ +SF     +A+Q+  F L+ N+G I+ +  LD EE
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVLNTLDFEE 309

Query: 312 SGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNV 371
              Y + ++A D  G  A+  V + V+D NDNAPEV+  SL + + E++  GT IALL V
Sbjct: 310 VKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKV 369

Query: 372 NDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPP 431
            D+DS  NG+V C ++G++PFK+  S  N Y LVTD VLDREQ P YNITVTATDRG PP
Sbjct: 370 RDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPP 429

Query: 432 LSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSL 491
           LS+ + I+L++ D NDN PVF Q+SY  ++ ENNP G S+  V A DPD   N Q++Y +
Sbjct: 430 LSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCI 489

Query: 492 AENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLF 551
             + ++   LSSYVSI++++GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + 
Sbjct: 490 MASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 549

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
           V D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 550 VDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 609

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 671
           SEPGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ +V
Sbjct: 610 SEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 669

Query: 672 LADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR 718
           L D+     P++ + ++L  YLVVA+A +S +FL  +IL +ALRLRR
Sbjct: 670 LPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715


>gi|13470082 protocadherin gamma subfamily B, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 923

 Score =  687 bits (1772), Expect = 0.0
 Identities = 362/707 (51%), Positives = 486/707 (68%), Gaps = 9/707 (1%)

Query: 14  VLLGILLGTLWETGCTQIRYSVPEELEKGSRVGDISRDLGLEPRELAERGVRIIPRGRTQ 73
           VL   LL       C QIRY +PEE+ KGS VG+++ DLG   +EL  R +R+       
Sbjct: 16  VLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRKLRV--SSEKP 73

Query: 74  LFALNPRSGSLVTAGRIDREELCMGAIKCQLNLDILMEDKVKIYGVEVEVRDINDNAPYF 133
            F ++  SG L+ + R+DREE+C     C L  + + E+ +  Y V VE+ DIND+ P F
Sbjct: 74  YFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEIEDINDHTPKF 133

Query: 134 RESELEIKISENAATEMRFPLPHAWDPDIGKNSLQSYELSPNTHFSLIVQNGADGSKYPE 193
            ++  E++ISE+A    RF L  A D DIG N+LQ+Y+LSP+ HFSLI +  +DGSKYPE
Sbjct: 134 TQNSFELQISESAQPGTRFILGSAHDADIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPE 193

Query: 194 LVLKRALDREEKAAHHLVLTASDGGDPVRTGTARIRVMVLDANDNAPAFAQPEYRASVPE 253
           +VLK  LDRE++ ++HL LTA D G P  + TA+I V+V DANDNAP F+Q  YR S+ E
Sbjct: 194 MVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSE 253

Query: 254 NLALGTQLLVVNATDPDEGVNAEVRYSFRYVDDKAAQV--FKLDCNSGTISTIGELDHEE 311
           N+  GT +L V ATD DEGVNAE+ +SF     +A+Q+  F L+ N+G I+ +  LD EE
Sbjct: 254 NVYPGTTVLQVTATDQDEGVNAEITFSF----SEASQITQFDLNSNTGEITVLNTLDFEE 309

Query: 312 SGFYQMEVQAMDNAGYSARAKVLITVLDVNDNAPEVVLTSLASSVPENSPRGTLIALLNV 371
              Y + ++A D  G  A+  V + V+D NDNAPEV+  SL + + E++  GT IALL V
Sbjct: 310 VKEYSIVLEARDGGGMIAQCTVEVEVIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKV 369

Query: 372 NDQDSEENGQVICFIQGNLPFKLEKSYGNYYSLVTDIVLDREQVPSYNITVTATDRGTPP 431
            D+DS  NG+V C ++G++PFK+  S  N Y LVTD VLDREQ P YNITVTATDRG PP
Sbjct: 370 RDKDSRHNGEVTCKLEGDVPFKILTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPP 429

Query: 432 LSTETHISLNVADTNDNPPVFPQASYSAYIPENNPRGVSLVSVTAHDPDCEENAQITYSL 491
           LS+ + I+L++ D NDN PVF Q+SY  ++ ENNP G S+  V A DPD   N Q++Y +
Sbjct: 430 LSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCI 489

Query: 492 AENTIQGASLSSYVSINSDTGVLYALSSFDYEQFRDLQVKVMARDNGHPPLSSNVSLSLF 551
             + ++   LSSYVSI++++GV++A  +FD+EQ R  ++ + ARD G P LS+NVSL + 
Sbjct: 490 MASDLEQRELSSYVSISAESGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVL 549

Query: 552 VLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKA 611
           V D+NDNAP +LYPAL  DGS   ++ P +AEPGYLVTKVVAVD DSG NAWLSY +L+A
Sbjct: 550 VDDRNDNAPRVLYPALGPDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQA 609

Query: 612 SEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPQV 671
           SEPGLFS+GL TGEVRTARAL DRDA++Q L+VAV+D GQPPLSAT TL +  ADS+ +V
Sbjct: 610 SEPGLFSLGLRTGEVRTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEV 669

Query: 672 LADLGSLESPANSETSDLTLYLVVAVAAVSCVFLAFVILLLALRLRR 718
           L D+     P++ + ++L  YLVVA+A +S +FL  +IL +ALRLRR
Sbjct: 670 LPDITDRPDPSDLQ-AELQFYLVVALALISVLFLVAMILAIALRLRR 715


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,129,969
Number of Sequences: 37866
Number of extensions: 1348523
Number of successful extensions: 10235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3097
Number of HSP's gapped (non-prelim): 596
length of query: 820
length of database: 18,247,518
effective HSP length: 111
effective length of query: 709
effective length of database: 14,044,392
effective search space: 9957473928
effective search space used: 9957473928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.

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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.