SEMA4D 13185

Name: SEMA4D	Sequence: fasta or formatted (738aa)		NCBI GI: 214010220
Description: semaphorin 4D isoform 2		Referenced in: Semaphorins
Other entries for this name: alt prot [862aa] semaphorin 4D isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 59 2 C cysteine 2.8 21 1 D aspartate 5.3 39 2 E glutamate 5.3 39 2 F phenylalanine 4.3 32 3 G glycine 5.6 41 2 H histidine 3.0 22 1 I isoleucine 3.3 24 2 K lysine 4.7 35 2 L leucine 8.8 65 3 M methionine 1.8 13 2 N asparagine 3.3 24 2 P proline 6.6 49 3 Q glutamine 3.7 27 1 R arginine 5.8 43 2 S serine 9.3 69 3 T threonine 5.4 40 2 V valine 8.0 59 2 W tryptophan 1.9 14 1 Y tyrosine 3.1 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 semaphorin 4D isoform 2 SEMA4D 0.743 semaphorin 4D isoform 1 SEMA4C 0.298 semaphorin 4C SEMA4B 0.289 semaphorin 4B precursor SEMA4B 0.289 semaphorin 4B precursor SEMA4G 0.259 semaphorin 4G SEMA4F 0.237 semaphorin W SEMA4A 0.235 semaphorin B SEMA3A 0.212 semaphorin 3A precursor SEMA3C 0.205 semaphorin 3C SEMA3B 0.200 semaphorin 3B isoform 1 precursor SEMA3D 0.199 semaphorin 3D SEMA3B 0.198 semaphorin 3B isoform 2 precursor SEMA3E 0.190 semaphorin 3E SEMA3F 0.184 semaphorin 3F SEMA3G 0.182 semaphorin sem2 SEMA6D 0.172 semaphorin 6D isoform 1 precursor SEMA6D 0.172 semaphorin 6D isoform 5 precursor SEMA6D 0.172 semaphorin 6D isoform 4 precursor SEMA6D 0.172 semaphorin 6D isoform 3 precursor SEMA6D 0.172 semaphorin 6D isoform 2 precursor SEMA6A 0.163 sema domain, transmembrane domain (TM), and cytoplas... SEMA5B 0.158 semaphorin 5B isoform 1 SEMA5A 0.150 semaphorin 5A SEMA6D 0.149 semaphorin 6D isoform 6 precursor SEMA6B 0.140 semaphorin 6B precursor SEMA6C 0.140 semaphorin Y SEMA7A 0.111 semaphorin 7A isoform 1 preproprotein SEMA7A 0.111 semaphorin 7A isoform 2 preproprotein SEMA7A 0.095 semaphorin 7A isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.