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Search of human proteins with 99028881
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|99028881 V-set domain containing T cell activation inhibitor
1 [Homo sapiens]
(282 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|99028881 V-set domain containing T cell activation inhibitor ... 555 e-158
gi|13376852 CD276 antigen isoform b [Homo sapiens] 92 4e-19
gi|67188443 CD276 antigen isoform a [Homo sapiens] 91 1e-18
gi|5901964 HERV-H LTR-associating 2 [Homo sapiens] 87 2e-17
gi|37574624 butyrophilin-like 3 [Homo sapiens] 86 3e-17
gi|37221189 butyrophilin, subfamily 3, member A1 isoform b [Homo... 83 2e-16
gi|222418660 butyrophilin, subfamily 3, member A1 isoform d [Hom... 83 2e-16
gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo... 83 2e-16
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 83 3e-16
gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens] 82 4e-16
gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens] 82 4e-16
gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens] 82 4e-16
gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo ... 82 5e-16
gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo... 82 5e-16
gi|34932496 butyrophilin, subfamily 3, member A2 precursor [Homo... 81 1e-15
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 75 8e-14
gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2 precu... 75 8e-14
gi|9624969 butyrophilin-like 2 [Homo sapiens] 69 6e-12
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 69 6e-12
gi|7661534 CD274 molecule [Homo sapiens] 65 5e-11
gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Hom... 65 7e-11
gi|60460897 butyrophilin-like 9 [Homo sapiens] 65 7e-11
gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4 pr... 59 6e-09
gi|56788395 myelin oligodendrocyte glycoprotein isoform alpha4 p... 59 6e-09
gi|56788393 myelin oligodendrocyte glycoprotein isoform beta5 pr... 59 6e-09
gi|56788391 myelin oligodendrocyte glycoprotein isoform beta2 pr... 59 6e-09
gi|56788389 myelin oligodendrocyte glycoprotein isoform alpha3 p... 59 6e-09
gi|56788387 myelin oligodendrocyte glycoprotein isoform beta3 pr... 59 6e-09
gi|56788385 myelin oligodendrocyte glycoprotein isoform beta1 pr... 59 6e-09
gi|56788383 myelin oligodendrocyte glycoprotein isoform alpha2 p... 59 6e-09
>gi|99028881 V-set domain containing T cell activation inhibitor 1
[Homo sapiens]
Length = 282
Score = 555 bits (1431), Expect = e-158
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP 60
MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP
Sbjct: 1 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP 60
Query: 61 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 120
DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV
Sbjct: 61 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 120
Query: 121 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV 180
QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV
Sbjct: 121 QLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSETLRCEAPRWFPQPTVV 180
Query: 181 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV 240
WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV
Sbjct: 181 WASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDIAKATGDIKV 240
Query: 241 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 282
TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK
Sbjct: 241 TESEIKRRSHLQLLNSKASLCVSSFFAISWALLPLSPYLMLK 282
>gi|13376852 CD276 antigen isoform b [Homo sapiens]
Length = 316
Score = 92.4 bits (228), Expect = 4e-19
Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 19/232 (8%)
Query: 21 GAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEGVLG 78
GA + F ++G + V +G D L C+F EP L+ + + W
Sbjct: 15 GAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQLTDTKQ 74
Query: 79 LVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGK 138
LVH F EG+D Q + RTA+F D + GNASLRL+ V++ D G++ C+ ++ +
Sbjct: 75 LVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCF-VSIRDF 129
Query: 139 GNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGANFS 192
G+A + + A +S P + ++ N + T+ C + R +P+ V W Q QG +
Sbjct: 130 GSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFW--QDGQGVPLT 187
Query: 193 EVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAK--ATGDIKVT 241
TS ++ +E V SVL V N TYSC++ N + + A G + +T
Sbjct: 188 GNVTTS-QMANEQGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 238
>gi|67188443 CD276 antigen isoform a [Homo sapiens]
Length = 534
Score = 90.5 bits (223), Expect = 1e-18
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 19/205 (9%)
Query: 48 IGEDGILSCTF--EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFA 105
+G D L C+F EP L+ + + W LVH F EG+D Q + RTA+F
Sbjct: 260 VGTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRD----QGSAYANRTALFP 315
Query: 106 DQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGA-FSMPEVNVDYN---- 160
D + GNASLRL+ V++ D G++ C+ ++ + G+A + + A +S P + ++ N
Sbjct: 316 DLLAQGNASLRLQRVRVADEGSFTCF-VSIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLR 374
Query: 161 -ASSETLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVT- 218
+ T+ C + R +P+ V W Q QG + TS ++ +E V SVL V
Sbjct: 375 PGDTVTITCSSYRGYPEAEVFW--QDGQGVPLTGNVTTS-QMANEQGLFDVHSVLRVVLG 431
Query: 219 INNTYSCMIENDIAK--ATGDIKVT 241
N TYSC++ N + + A G + +T
Sbjct: 432 ANGTYSCLVRNPVLQQDAHGSVTIT 456
Score = 90.1 bits (222), Expect = 2e-18
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 17/230 (7%)
Query: 21 GAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEGVLG 78
GA + F ++G + V +G D L C+F EP L+ + + W
Sbjct: 15 GAALGALWFCLTGALEVQVPEDPVVALVGTDATLCCSFSPEPGFSLAQLNLIWQLTDTKQ 74
Query: 79 LVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGK 138
LVH F EG+D Q + RTA+F D + GNASLRL+ V++ D G++ C+ ++ +
Sbjct: 75 LVHSFAEGQD----QGSAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCF-VSIRDF 129
Query: 139 GNANLEYKTGA-FSMPEVNVDYN-----ASSETLRCEAPRWFPQPTVVWASQVDQGANFS 192
G+A + + A +S P + ++ N + T+ C + + +P+ V W Q QG +
Sbjct: 130 GSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYQGYPEAEVFW--QDGQGVPLT 187
Query: 193 EVSNTSFELNSENVTMKVVSVLYNVT-INNTYSCMIENDIAKATGDIKVT 241
TS ++ +E V S+L V N TYSC++ N + + VT
Sbjct: 188 GNVTTS-QMANEQGLFDVHSILRVVLGANGTYSCLVRNPVLQQDAHSSVT 236
>gi|5901964 HERV-H LTR-associating 2 [Homo sapiens]
Length = 414
Score = 87.0 bits (214), Expect = 2e-17
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 10/190 (5%)
Query: 46 GNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFA 105
G + ED IL +FE + S++VI W + VH + +G D L QD + RT++F
Sbjct: 41 GRLDEDIILPSSFE---RGSEVVIHWKYQDSYK-VHSYYKGSDHLESQDPRYANRTSLFY 96
Query: 106 DQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVDYNASSET 165
+++ GNASL + V L D G Y CY+ T+ + K G F P + + ++
Sbjct: 97 NEIQNGNASLFFRRVSLLDEGIYTCYVGTAIQVITNKVVLKVGVFLTPVMKYEKRNTNSF 156
Query: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
L C +P+P + W ++D + +S + E + + S L N++Y C
Sbjct: 157 LICSVLSVYPRPIITW--KMDN----TPISENNMEETGSLDSFSINSPLNITGSNSSYEC 210
Query: 226 MIENDIAKAT 235
IEN + K T
Sbjct: 211 TIENSLLKQT 220
>gi|37574624 butyrophilin-like 3 [Homo sapiens]
Length = 466
Score = 86.3 bits (212), Expect = 3e-17
Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 19 LAGAIALIIGFG--ISGRHSITVTTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGV 76
+A + L++ F +SG+ +T +GED + SC+ P+ + +++ +
Sbjct: 1 MAFVLILVLSFYELVSGQWQVTGPGKFVQALVGEDAVFSCSLFPETSAEAMEVRFFRNQF 60
Query: 77 LGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSK 136
+VH +++G+D S+Q +RGRT D + G SLRLKN+ +D G Y C+ +
Sbjct: 61 HAVVHLYRDGEDWESKQMPQYRGRTEFVKDSIAGGRVSLRLKNITPSDIGLYGCWFSSQI 120
Query: 137 GKGNANLEYKTGAF-SMPEVN-VDYNASSETLRCEAPRWFPQPTVVWASQVDQGANFSEV 194
A E + A S+P ++ V Y L C + WFPQPT W QG + S
Sbjct: 121 YDEEATWELRVAALGSLPLISIVGYVDGGIQLLCLSSGWFPQPTAKWKG--PQGQDLSSD 178
Query: 195 SNTS 198
S +
Sbjct: 179 SRAN 182
>gi|37221189 butyrophilin, subfamily 3, member A1 isoform b [Homo
sapiens]
Length = 352
Score = 83.2 bits (204), Expect = 2e-16
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 35 HSITVTTVASAGNI----GEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDEL 90
HS + + +G I GED L C P + + ++W+ + +V+ + +GK+
Sbjct: 27 HSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVE 86
Query: 91 SEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF 150
Q +RGRT++ D + G A+LR+ NV +D+G Y CY A +E K A
Sbjct: 87 DRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAAL 146
Query: 151 SMPEVNVD---YNASSETLRCEAPRWFPQPTVVWASQVDQGANFSEV 194
+++VD Y L C + W+PQP + W++ ++G N V
Sbjct: 147 G-SDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSN--NKGENIPTV 190
>gi|222418660 butyrophilin, subfamily 3, member A1 isoform d [Homo
sapiens]
Length = 378
Score = 83.2 bits (204), Expect = 2e-16
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 35 HSITVTTVASAGNI----GEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDEL 90
HS + + +G I GED L C P + + ++W+ + +V+ + +GK+
Sbjct: 27 HSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVE 86
Query: 91 SEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF 150
Q +RGRT++ D + G A+LR+ NV +D+G Y CY A +E K A
Sbjct: 87 DRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAAL 146
Query: 151 SMPEVNVD---YNASSETLRCEAPRWFPQPTVVWASQVDQGANFSEV 194
+++VD Y L C + W+PQP + W++ ++G N V
Sbjct: 147 G-SDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSN--NKGENIPTV 190
>gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo
sapiens]
Length = 513
Score = 83.2 bits (204), Expect = 2e-16
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 35 HSITVTTVASAGNI----GEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDEL 90
HS + + +G I GED L C P + + ++W+ + +V+ + +GK+
Sbjct: 27 HSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVE 86
Query: 91 SEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF 150
Q +RGRT++ D + G A+LR+ NV +D+G Y CY A +E K A
Sbjct: 87 DRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAAL 146
Query: 151 SMPEVNVD---YNASSETLRCEAPRWFPQPTVVWASQVDQGANFSEV 194
+++VD Y L C + W+PQP + W++ ++G N V
Sbjct: 147 G-SDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSN--NKGENIPTV 190
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 82.8 bits (203), Expect = 3e-16
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 5/184 (2%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED L C P+ + ++W ++ V V ++G+++ +EQ +RGR + D
Sbjct: 42 VGEDAELPCRLSPNASAEHLELRWFRKKVSPAVLVHRDGREQEAEQMPEYRGRATLVQDG 101
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVNVDYNASSE-T 165
+ G +LR++ V+++D G Y C+ A + K A S P +++ + E
Sbjct: 102 IAKGRVALRIRGVRVSDDGEYTCFFREDGSYEEALVHLKVAALGSDPHISMQVQENGEIC 161
Query: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
L C + W+P+P V W + +G F S S + E + SV+ T SC
Sbjct: 162 LECTSVGWYPEPQVQW--RTSKGEKFPSTSE-SRNPDEEGLFTVAASVIIRDTSAKNVSC 218
Query: 226 MIEN 229
I+N
Sbjct: 219 YIQN 222
>gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens]
Length = 340
Score = 82.4 bits (202), Expect = 4e-16
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED SC P + +++ + +VH +++GKD+ Q ++GRT + D
Sbjct: 32 VGEDAAFSCFLSPKTNAEAMEVRFFRGQFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDS 91
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVNV-DYNASSET 165
+ G SLRL+N+ + DAG Y C I + A E + A S+P +++ Y
Sbjct: 92 IAEGRISLRLENITVLDAGLYGCRISSQSYYQKAIWELQVSALGSVPLISITGYVDRDIQ 151
Query: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
L C++ WFP+PT W QG + S S T+ +++ L++V I+ T
Sbjct: 152 LLCQSSGWFPRPTAKWKG--PQGQDLSTDSRTNRDMHG----------LFDVEISLT--- 196
Query: 226 MIENDIAKATGDIKVTESEIKRRSHL-QLLNSKASLCVSSFFAISWAL 272
+ + G I + R +HL + + S+ + + F ISW L
Sbjct: 197 -----VQENAGSISCS----MRHAHLSREVESRVQIGDTFFEPISWHL 235
>gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens]
Length = 500
Score = 82.4 bits (202), Expect = 4e-16
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED SC P + +++ + +VH +++GKD+ Q ++GRT + D
Sbjct: 32 VGEDAAFSCFLSPKTNAEAMEVRFFRGQFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDS 91
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVNV-DYNASSET 165
+ G SLRL+N+ + DAG Y C I + A E + A S+P +++ Y
Sbjct: 92 IAEGRISLRLENITVLDAGLYGCRISSQSYYQKAIWELQVSALGSVPLISITGYVDRDIQ 151
Query: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
L C++ WFP+PT W QG + S S T+ +++ L++V I+ T
Sbjct: 152 LLCQSSGWFPRPTAKWKG--PQGQDLSTDSRTNRDMHG----------LFDVEISLT--- 196
Query: 226 MIENDIAKATGDIKVTESEIKRRSHL-QLLNSKASLCVSSFFAISWAL 272
+ + G I + R +HL + + S+ + + F ISW L
Sbjct: 197 -----VQENAGSISCS----MRHAHLSREVESRVQIGDTFFEPISWHL 235
>gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens]
Length = 347
Score = 82.4 bits (202), Expect = 4e-16
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED SC P + +++ + +VH +++GKD+ Q ++GRT + D
Sbjct: 32 VGEDAAFSCFLSPKTNAEAMEVRFFRGQFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDS 91
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVNV-DYNASSET 165
+ G SLRL+N+ + DAG Y C I + A E + A S+P +++ Y
Sbjct: 92 IAEGRISLRLENITVLDAGLYGCRISSQSYYQKAIWELQVSALGSVPLISITGYVDRDIQ 151
Query: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
L C++ WFP+PT W QG + S S T+ +++ L++V I+ T
Sbjct: 152 LLCQSSGWFPRPTAKWKG--PQGQDLSTDSRTNRDMHG----------LFDVEISLT--- 196
Query: 226 MIENDIAKATGDIKVTESEIKRRSHL-QLLNSKASLCVSSFFAISWAL 272
+ + G I + R +HL + + S+ + + F ISW L
Sbjct: 197 -----VQENAGSISCS----MRHAHLSREVESRVQIGDTFFEPISWHL 235
>gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo
sapiens]
Length = 584
Score = 82.0 bits (201), Expect = 5e-16
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED L C P + + ++W+ + +V+ + +GK+ Q +RGRT++ D
Sbjct: 44 VGEDADLPCHLFPTMSAETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDG 103
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVD---YNASSE 164
+ G A+LR+ NV +D+G Y CY A +E K A +++++ Y
Sbjct: 104 ITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALG-SDLHIEVKGYEDGGI 162
Query: 165 TLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYS 224
L C + W+PQP + W+ +G N V + + SV+ + S
Sbjct: 163 HLECRSTGWYPQPQIKWSD--TKGENIPAV-EAPVVADGVGLYAVAASVIMRGSSGGGVS 219
Query: 225 CMIENDI 231
C+I N +
Sbjct: 220 CIIRNSL 226
>gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo
sapiens]
Length = 542
Score = 82.0 bits (201), Expect = 5e-16
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED L C P + + ++W+ + +V+ + +GK+ Q +RGRT++ D
Sbjct: 2 VGEDADLPCHLFPTMSAETMELRWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDG 61
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMPEVNVD---YNASSE 164
+ G A+LR+ NV +D+G Y CY A +E K A +++++ Y
Sbjct: 62 ITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALG-SDLHIEVKGYEDGGI 120
Query: 165 TLRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYS 224
L C + W+PQP + W+ +G N V + + SV+ + S
Sbjct: 121 HLECRSTGWYPQPQIKWSD--TKGENIPAV-EAPVVADGVGLYAVAASVIMRGSSGGGVS 177
Query: 225 CMIENDI 231
C+I N +
Sbjct: 178 CIIRNSL 184
>gi|34932496 butyrophilin, subfamily 3, member A2 precursor [Homo
sapiens]
Length = 334
Score = 80.9 bits (198), Expect = 1e-15
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED L C P + + ++W+ + +V+ + +GK+ Q +RGRT++ D
Sbjct: 44 VGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDG 103
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVNV-DYNASSET 165
+ G A+LR+ NV +D+G Y CY A +E K A S V V Y
Sbjct: 104 ITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSNLHVEVKGYEDGGIH 163
Query: 166 LRCEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSC 225
L C + W+PQP + W++ +G N V + + SV+ SC
Sbjct: 164 LECRSTGWYPQPQIQWSNA--KGENIPAV-EAPVVADGVGLYEVAASVIMRGGSGEGVSC 220
Query: 226 MIENDI 231
+I N +
Sbjct: 221 IIRNSL 226
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 74.7 bits (182), Expect = 8e-14
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 12/234 (5%)
Query: 1 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP 60
M S + F S++++L AL+ S + + T +GE+ L C P
Sbjct: 1 MESAAALHFSRPASLLLLLLSLCALV-----SAQFIVVGPTDPILATVGENTTLRCHLSP 55
Query: 61 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 120
+ D+ ++W + V +K G++ EQ E +RGRT + + G+ +L + N+
Sbjct: 56 EKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDISRGSVALVIHNI 115
Query: 121 QLTDAGTYKCYIITSKGKGNANLE-YKTGAFSMPEVNV-DYNASSETLRCEAPRWFPQPT 178
+ GTY+CY + A L G S P +++ + L C + W+P+P
Sbjct: 116 TAQENGTYRCYFQEGRSYDEAILHLVVAGLGSKPLISMRGHEDGGIRLECISRGWYPKPL 175
Query: 179 VVWASQVDQGA-NFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDI 231
VW A EVS +++ + M +V+ SC I N +
Sbjct: 176 TVWRDPYGGVAPALKEVSMP----DADGLFMVTTAVIIRDKSVRNMSCSINNTL 225
>gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2
precursor [Homo sapiens]
Length = 334
Score = 74.7 bits (182), Expect = 8e-14
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 12/234 (5%)
Query: 1 MASLGQILFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEP 60
M S + F S++++L AL+ S + + T +GE+ L C P
Sbjct: 1 MESAAALHFSRPASLLLLLLSLCALV-----SAQFIVVGPTDPILATVGENTTLRCHLSP 55
Query: 61 DIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 120
+ D+ ++W + V +K G++ EQ E +RGRT + + G+ +L + N+
Sbjct: 56 EKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDISRGSVALVIHNI 115
Query: 121 QLTDAGTYKCYIITSKGKGNANLE-YKTGAFSMPEVNV-DYNASSETLRCEAPRWFPQPT 178
+ GTY+CY + A L G S P +++ + L C + W+P+P
Sbjct: 116 TAQENGTYRCYFQEGRSYDEAILHLVVAGLGSKPLISMRGHEDGGIRLECISRGWYPKPL 175
Query: 179 VVWASQVDQGA-NFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDI 231
VW A EVS +++ + M +V+ SC I N +
Sbjct: 176 TVWRDPYGGVAPALKEVSMP----DADGLFMVTTAVIIRDKSVRNMSCSINNTL 225
>gi|9624969 butyrophilin-like 2 [Homo sapiens]
Length = 455
Score = 68.6 bits (166), Expect = 6e-12
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 19 LAGAIALIIGFGISGRHSITVTTVASA----GNIGEDGILSCTFEPDIKLSDIVIQWLKE 74
L+GA+A + ++ + S + A +GED +L+C P + ++W +
Sbjct: 9 LSGAVASFLFILLTMKQSEDFRVIGPAHPILAGVGEDALLTCQLLPKRTTMHVEVRWYRS 68
Query: 75 GVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIIT 134
V ++G + Q E +RG + + GN +L++ N+Q +D G Y C+
Sbjct: 69 EPSTPVFVHRDGVEVTEMQMEEYRGWVEWIENGIAKGNVALKIHNIQPSDNGQYWCHFQD 128
Query: 135 SKGKGNANLEYK-TGAFSMPEVNVD-YNASSETLRCEAPRWFPQPTVVWASQVDQGANFS 192
G +L K G S P ++++ S L C A WFP+P V W + +G
Sbjct: 129 GNYCGETSLLLKVAGLGSAPSIHMEGPGESGVQLVCTARGWFPEPQVYW--EDIRGEKLL 186
Query: 193 EVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDI 231
VS + + V+ N + + SC++ N +
Sbjct: 187 AVSEHRIQDKDGLFYAEATLVVRNASAESV-SCLVHNPV 224
Score = 66.2 bits (160), Expect = 3e-11
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GED L+C P + ++W + VH + +G EQ +RGRT + +D
Sbjct: 259 VGEDIQLTCYLSPKANAQSMEVRWDRSHRYPAVHVYMDGDHVAGEQMAEYRGRTVLVSDA 318
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAF-SMPEVNVDYNASSETL 166
+ G +L++ + + +D G Y+C A+L+ K + S P + V+ E
Sbjct: 319 IDEGRLTLQILSARPSDDGQYRCLFEKDDVYQEASLDLKVVSLGSSPLITVEGQEDGEMQ 378
Query: 167 -RCEAPRWFPQPTVVW 181
C + WFPQP V W
Sbjct: 379 PMCSSDGWFPQPHVPW 394
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 68.6 bits (166), Expect = 6e-12
Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 7/227 (3%)
Query: 8 LFWSIISIIIILAGAIALIIGFGISGRHSITVTTVASAGNIGEDGILSCTFEPDIKLSDI 67
L +S+ + +++L + L + +S + ++ +GE+ L C P+ D+
Sbjct: 7 LHFSLPASLLLLLLLLLLSLCALVSAQFTVVGPANPILAMVGENTTLRCHLSPEKNAEDM 66
Query: 68 VIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGT 127
++W + V +K G++ EQ E +RGR + + G+ +L + NV + G
Sbjct: 67 EVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRITFVSKDINRGSVALVIHNVTAQENGI 126
Query: 128 YKCYIITSKGKGNANLE-YKTGAFSMPEVNVD-YNASSETLRCEAPRWFPQPTVVWASQV 185
Y+CY + A L G S P + + S L C + W+P+P VW
Sbjct: 127 YRCYFQEGRSYDEAILRLVVAGLGSKPLIEIKAQEDGSIWLECISGGWYPEPLTVWRDPY 186
Query: 186 DQGA-NFSEVSNTSFELNSENVTMKVVSVLYNVTINNTYSCMIENDI 231
+ EVS +++ + M +V+ SC + N +
Sbjct: 187 GEVVPALKEVSIA----DADGLFMVTTAVIIRDKYVRNVSCSVNNTL 229
>gi|7661534 CD274 molecule [Homo sapiens]
Length = 290
Score = 65.5 bits (158), Expect = 5e-11
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 30/239 (12%)
Query: 36 SITVTTVASAGNIGEDGILSCTF--EPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQ 93
++TV G + + C F E + L+ +++ W E + +F G+++L Q
Sbjct: 20 TVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKN--IIQFVHGEEDLKVQ 77
Query: 94 DEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKTGAFSMP 153
+R R + DQ+ +GNA+L++ +V+L DAG Y+C I G A+ + T + P
Sbjct: 78 HSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMI----SYGGADYKRITVKVNAP 133
Query: 154 --EVN-----VDYNASSETLRCEAPRWFPQPTVVWAS---QVDQGANFSEVSNTSFELNS 203
++N VD S L C+A +P+ V+W S QV G + S +L +
Sbjct: 134 YNKINQRILVVDPVTSEHELTCQA-EGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFN 192
Query: 204 ENVTMKVVSVLYNVTINNTYSCMIE--NDIAKATGDIKVTESEI----KRRSHLQLLNS 256
T+++ N T N + C + T ++ + E + R+HL +L +
Sbjct: 193 VTSTLRI-----NTTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPPNERTHLVILGA 246
>gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Homo
sapiens]
Length = 461
Score = 65.1 bits (157), Expect = 7e-11
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 35 HSITVTTVASAGNI----GEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDEL 90
HS + + +G I GED L C P + + ++W+ + +V+ + +GK+
Sbjct: 27 HSAQFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVE 86
Query: 91 SEQDEMFRGRTAVFADQVIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK---- 146
Q +RGRT++ D + G A+LR+ NV +D+G Y CY A +E K
Sbjct: 87 DRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVADG 146
Query: 147 TGAFSMPEVNVDYNASSETLRC 168
G +++ + +S E + C
Sbjct: 147 VGLYAVAASVIMRGSSGEGVSC 168
>gi|60460897 butyrophilin-like 9 [Homo sapiens]
Length = 535
Score = 65.1 bits (157), Expect = 7e-11
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+GE+ C P + + I+W + +VH ++E ++ Q FR RT + D
Sbjct: 51 VGEEVEFPCHLWPQLDAQQMEIRWFRSQTFNVVHLYQEQQELPGRQMPAFRNRTKLVKDD 110
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK-TGAFSMPEVNVD-YNASSET 165
+ G+ L+L ++ +D GTY C + G A E + G S P ++++ +
Sbjct: 111 IAYGSVVLQLHSIIPSDKGTYGCRFHSDNFSGEALWELEVAGLGSDPHLSLEGFKEGGIQ 170
Query: 166 LRCEAPRWFPQPTVVWASQVDQ 187
LR + W+P+P V W Q
Sbjct: 171 LRLRSSGWYPKPKVQWRDHQGQ 192
>gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4
precursor [Homo sapiens]
Length = 171
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788395 myelin oligodendrocyte glycoprotein isoform alpha4
precursor [Homo sapiens]
Length = 171
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788393 myelin oligodendrocyte glycoprotein isoform beta5
precursor [Homo sapiens]
Length = 213
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788391 myelin oligodendrocyte glycoprotein isoform beta2
precursor [Homo sapiens]
Length = 206
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788389 myelin oligodendrocyte glycoprotein isoform alpha3
precursor [Homo sapiens]
Length = 224
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788387 myelin oligodendrocyte glycoprotein isoform beta3
precursor [Homo sapiens]
Length = 229
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788385 myelin oligodendrocyte glycoprotein isoform beta1
precursor [Homo sapiens]
Length = 252
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
>gi|56788383 myelin oligodendrocyte glycoprotein isoform alpha2
precursor [Homo sapiens]
Length = 208
Score = 58.5 bits (140), Expect = 6e-09
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 48 IGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQ 107
+G++ L C P + + + W + +VH ++ GKD+ +Q +RGRT + D
Sbjct: 45 VGDEVELPCRISPGKNATGMEVGWYRPPFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDA 104
Query: 108 VIVGNASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYK 146
+ G +LR++NV+ +D G + C+ + A +E K
Sbjct: 105 IGEGKVTLRIRNVRFSDEGGFTCFFRDHSYQEEAAMELK 143
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,315,854
Number of Sequences: 37866
Number of extensions: 369595
Number of successful extensions: 1875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 1326
Number of HSP's gapped (non-prelim): 652
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.