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Search of human proteins with 91807117
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91807117 TM2 domain containing 3 isoform a [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91807117 TM2 domain containing 3 isoform a [Homo sapiens] 529 e-150
gi|91807119 TM2 domain containing 3 isoform b [Homo sapiens] 465 e-131
gi|14042945 beta-amyloid binding protein precursor [Homo sapiens] 77 1e-14
gi|66932897 TM2 domain containing 2 isoform b [Homo sapiens] 65 5e-11
gi|66932895 TM2 domain containing 2 isoform b [Homo sapiens] 65 5e-11
gi|66932893 TM2 domain containing 2 isoform b [Homo sapiens] 65 5e-11
gi|17865797 TM2 domain containing 2 isoform a [Homo sapiens] 65 5e-11
gi|4504151 granulin precursor [Homo sapiens] 33 0.23
gi|32171238 BAI1-associated protein 2-like 1 [Homo sapiens] 32 0.51
gi|223029476 NEL-like protein 2 isoform d [Homo sapiens] 32 0.51
gi|223029474 NEL-like protein 2 isoform c [Homo sapiens] 32 0.51
gi|223029472 NEL-like protein 2 isoform b precursor [Homo sapiens] 32 0.51
gi|223029470 NEL-like protein 2 isoform a [Homo sapiens] 32 0.51
gi|5453766 NEL-like protein 2 isoform b precursor [Homo sapiens] 32 0.51
gi|40807489 egf-like module containing, mucin-like, hormone rece... 31 1.1
gi|32967311 ephrin receptor EphA2 [Homo sapiens] 29 3.3
gi|22547121 tumor necrosis factor receptor superfamily, member 1... 29 3.3
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 29 4.3
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 29 4.3
gi|31657140 insulin receptor-related receptor precursor [Homo sa... 28 5.6
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 28 7.4
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 28 7.4
gi|45269141 multimerin 1 [Homo sapiens] 28 9.6
gi|53828708 olfactory receptor, family 6, subfamily C, member 4 ... 28 9.6
gi|122937283 6720455I24Rik homolog [Homo sapiens] 28 9.6
>gi|91807117 TM2 domain containing 3 isoform a [Homo sapiens]
Length = 247
Score = 529 bits (1362), Expect = e-150
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MAGGVLPLRGLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTE 60
MAGGVLPLRGLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTE
Sbjct: 1 MAGGVLPLRGLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTE 60
Query: 61 IPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFI 120
IPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFI
Sbjct: 61 IPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFI 120
Query: 121 INMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNW 180
INMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNW
Sbjct: 121 INMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNW 180
Query: 181 TGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGP 240
TGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGP
Sbjct: 181 TGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGP 240
Query: 241 ADGSLYI 247
ADGSLYI
Sbjct: 241 ADGSLYI 247
>gi|91807119 TM2 domain containing 3 isoform b [Homo sapiens]
Length = 221
Score = 465 bits (1196), Expect = e-131
Identities = 221/247 (89%), Positives = 221/247 (89%), Gaps = 26/247 (10%)
Query: 1 MAGGVLPLRGLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTE 60
MAGGVLPLRGLRALCRVLLFLSQFCILSGGE STE
Sbjct: 1 MAGGVLPLRGLRALCRVLLFLSQFCILSGGE--------------------------STE 34
Query: 61 IPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFI 120
IPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFI
Sbjct: 35 IPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFI 94
Query: 121 INMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNW 180
INMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNW
Sbjct: 95 INMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNW 154
Query: 181 TGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGP 240
TGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGP
Sbjct: 155 TGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGP 214
Query: 241 ADGSLYI 247
ADGSLYI
Sbjct: 215 ADGSLYI 221
>gi|14042945 beta-amyloid binding protein precursor [Homo sapiens]
Length = 207
Score = 77.4 bits (189), Expect = 1e-14
Identities = 53/116 (45%), Positives = 65/116 (56%), Gaps = 12/116 (10%)
Query: 138 CTNSTSCMTVSCPRQRYPA-NCTVRD----HVHCLGNRT-FPKMLYCNWTGGYKWSTALA 191
CTN T+ VSC +PA N T +D H GN F K + C GY + A+A
Sbjct: 73 CTNYTA--HVSC----FPAPNITCKDSSGNETHFTGNEVGFFKPISCRNVNGYSYKVAVA 126
Query: 192 LSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 247
LS+ LG GADRFYLG GL K + G GI +LID +LI + VGP+DGS YI
Sbjct: 127 LSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIGSLIDFILISMQIVGPSDGSSYI 182
>gi|66932897 TM2 domain containing 2 isoform b [Homo sapiens]
Length = 171
Score = 65.1 bits (157), Expect = 5e-11
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 158 CTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKL 216
C D + C RTF + C G+ + T L S LG FG DRF LG +GKL
Sbjct: 78 CHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKL 137
Query: 217 FSFGGLGIWTLIDVLLIGVGYVGPADGS 244
+ GGLGIW +D++L+ G + P+DGS
Sbjct: 138 LTLGGLGIWWFVDLILLITGGLMPSDGS 165
>gi|66932895 TM2 domain containing 2 isoform b [Homo sapiens]
Length = 171
Score = 65.1 bits (157), Expect = 5e-11
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 158 CTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKL 216
C D + C RTF + C G+ + T L S LG FG DRF LG +GKL
Sbjct: 78 CHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKL 137
Query: 217 FSFGGLGIWTLIDVLLIGVGYVGPADGS 244
+ GGLGIW +D++L+ G + P+DGS
Sbjct: 138 LTLGGLGIWWFVDLILLITGGLMPSDGS 165
>gi|66932893 TM2 domain containing 2 isoform b [Homo sapiens]
Length = 171
Score = 65.1 bits (157), Expect = 5e-11
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 158 CTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKL 216
C D + C RTF + C G+ + T L S LG FG DRF LG +GKL
Sbjct: 78 CHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKL 137
Query: 217 FSFGGLGIWTLIDVLLIGVGYVGPADGS 244
+ GGLGIW +D++L+ G + P+DGS
Sbjct: 138 LTLGGLGIWWFVDLILLITGGLMPSDGS 165
>gi|17865797 TM2 domain containing 2 isoform a [Homo sapiens]
Length = 214
Score = 65.1 bits (157), Expect = 5e-11
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 158 CTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKL 216
C D + C RTF + C G+ + T L S LG FG DRF LG +GKL
Sbjct: 121 CHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKL 180
Query: 217 FSFGGLGIWTLIDVLLIGVGYVGPADGS 244
+ GGLGIW +D++L+ G + P+DGS
Sbjct: 181 LTLGGLGIWWFVDLILLITGGLMPSDGS 208
>gi|4504151 granulin precursor [Homo sapiens]
Length = 593
Score = 33.1 bits (74), Expect = 0.23
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 84 CTTNFSCTYGKPVTFDCAVKP-SVTCVDQDFKSQKNFIINMTCRFCWQ-----------L 131
C+ SC + T C P +V C D + F + R C+Q
Sbjct: 67 CSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCCPRGFHCSADGRSCFQRSGNNSVGAIQC 126
Query: 132 PETDYECTN-STSCMTVS-----CPRQRYPANCTVRDHVHCLGNRTFPKMLY 177
P++ +EC + ST C+ V CP + A+C D VHC + F +++
Sbjct: 127 PDSQFECPDFSTCCVMVDGSWGCCPMPQ--ASC-CEDRVHCCPHGAFCDLVH 175
>gi|32171238 BAI1-associated protein 2-like 1 [Homo sapiens]
Length = 511
Score = 32.0 bits (71), Expect = 0.51
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 20 FLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTEI--PPYVMKCPSNGLCSRL 77
F S + L +++A+ P P R+ + V + S+ + PP ++C S G +
Sbjct: 392 FPSSYTKLLEENETEAVTVPTPSPTPVRSISTVNLSENSSVVIPPPDYLECLSMGAAADR 451
Query: 78 PADCIDCTTNFSCTYGKPVT 97
AD T+ F KP T
Sbjct: 452 RADSARTTSTFKAPASKPET 471
>gi|223029476 NEL-like protein 2 isoform d [Homo sapiens]
Length = 839
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 73 LCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQD----FKSQKNFIIN-MTCRF 127
+C R+ DC + T + C +C + S C+ Q+ + S ++ N CR
Sbjct: 694 MCRRMVCDCENPTVDLFCCP------ECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRC 747
Query: 128 ------CWQLPETDYECTNSTSCMTVSCPR 151
CW LP D EC S CPR
Sbjct: 748 LQGEVDCWPLPCPDVECEFSILPENECCPR 777
>gi|223029474 NEL-like protein 2 isoform c [Homo sapiens]
Length = 815
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 73 LCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQD----FKSQKNFIIN-MTCRF 127
+C R+ DC + T + C +C + S C+ Q+ + S ++ N CR
Sbjct: 670 MCRRMVCDCENPTVDLFCCP------ECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRC 723
Query: 128 ------CWQLPETDYECTNSTSCMTVSCPR 151
CW LP D EC S CPR
Sbjct: 724 LQGEVDCWPLPCPDVECEFSILPENECCPR 753
>gi|223029472 NEL-like protein 2 isoform b precursor [Homo sapiens]
Length = 816
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 73 LCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQD----FKSQKNFIIN-MTCRF 127
+C R+ DC + T + C +C + S C+ Q+ + S ++ N CR
Sbjct: 671 MCRRMVCDCENPTVDLFCCP------ECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRC 724
Query: 128 ------CWQLPETDYECTNSTSCMTVSCPR 151
CW LP D EC S CPR
Sbjct: 725 LQGEVDCWPLPCPDVECEFSILPENECCPR 754
>gi|223029470 NEL-like protein 2 isoform a [Homo sapiens]
Length = 866
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 73 LCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQD----FKSQKNFIIN-MTCRF 127
+C R+ DC + T + C +C + S C+ Q+ + S ++ N CR
Sbjct: 721 MCRRMVCDCENPTVDLFCCP------ECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRC 774
Query: 128 ------CWQLPETDYECTNSTSCMTVSCPR 151
CW LP D EC S CPR
Sbjct: 775 LQGEVDCWPLPCPDVECEFSILPENECCPR 804
>gi|5453766 NEL-like protein 2 isoform b precursor [Homo sapiens]
Length = 816
Score = 32.0 bits (71), Expect = 0.51
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 17/90 (18%)
Query: 73 LCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQD----FKSQKNFIIN-MTCRF 127
+C R+ DC + T + C +C + S C+ Q+ + S ++ N CR
Sbjct: 671 MCRRMVCDCENPTVDLFCCP------ECDPRLSSQCLHQNGETLYNSGDTWVQNCQQCRC 724
Query: 128 ------CWQLPETDYECTNSTSCMTVSCPR 151
CW LP D EC S CPR
Sbjct: 725 LQGEVDCWPLPCPDVECEFSILPENECCPR 754
>gi|40807489 egf-like module containing, mucin-like, hormone
receptor-like sequence 1 [Homo sapiens]
Length = 886
Score = 30.8 bits (68), Expect = 1.1
Identities = 42/169 (24%), Positives = 52/169 (30%), Gaps = 35/169 (20%)
Query: 22 SQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAESTEIPPYVMKCPSNGLCSRLPA-- 79
S +C G S KDPG R + E C N C L
Sbjct: 53 SYYCACKQGFLSSNGQNHFKDPGV--------RCKDIDECSQSPQPCGPNSSCKNLSGRY 104
Query: 80 --DCID---CTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFIINMTCRFCWQLPET 134
C+D T GKP F C T +++ +T C PE
Sbjct: 105 KCSCLDGFSSPTGNDWVPGKPGNFSC------TDINEC----------LTSSVC---PEH 145
Query: 135 DYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNWTGG 183
+C NS + SC N T D C R P+ CN T G
Sbjct: 146 S-DCVNSMGSYSCSCQVGFISRNSTCEDVDECADPRACPEHATCNNTVG 193
>gi|32967311 ephrin receptor EphA2 [Homo sapiens]
Length = 976
Score = 29.3 bits (64), Expect = 3.3
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 57 ESTEIPPYVMKCPSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPS----VTCVD-- 110
E++E P ++CP + L S A +C F P + C PS +T V
Sbjct: 284 EASESP--CLECPEHTLPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAPHYLTAVGMG 341
Query: 111 ----------QDFKSQKNFIINMTCRFCWQLPETDYEC 138
QD +++ + ++TC CW PE+ EC
Sbjct: 342 AKVELRWTPPQDSGGREDIVYSVTCEQCW--PESG-EC 376
>gi|22547121 tumor necrosis factor receptor superfamily, member 10c
precursor [Homo sapiens]
Length = 259
Score = 29.3 bits (64), Expect = 3.3
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 22/112 (19%)
Query: 67 KCPSNGLCSRLPADCIDCTTNFSCTYG---KPVTFDCAV-------KPSVT--------C 108
+CP+ S C CT T +P F C V K S T C
Sbjct: 52 ECPAGSHRSEHTGACNPCTEGVDYTNASNNEPSCFPCTVCKSDQKHKSSCTMTRDTVCQC 111
Query: 109 VDQDFKSQKNFIINMTCRFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTV 160
+ F+++ + CR C + P + + +N TS + C + + AN TV
Sbjct: 112 KEGTFRNENS---PEMCRKCSRCPSGEVQVSNCTSWDDIQCV-EEFGANATV 159
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 28.9 bits (63), Expect = 4.3
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 3 GGVLPLR---GLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAEST 59
G +LP R AL LL + L EQ + + +S K+PG VVPR + S
Sbjct: 4893 GRILPKRIHLRAEALPLALLCNGKNYSLHIEEQGEGVQESKKEPG------VVPRKSASF 4946
Query: 60 EIPPYVMKC 68
PP+ + C
Sbjct: 4947 PPPPFYLNC 4955
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 28.9 bits (63), Expect = 4.3
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 3 GGVLPLR---GLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAEST 59
G +LP R AL LL + L EQ + + +S K+PG VVPR + S
Sbjct: 4741 GRILPKRIHLRAEALPLALLCNGKNYSLHIEEQGEGVQESKKEPG------VVPRKSASF 4794
Query: 60 EIPPYVMKC 68
PP+ + C
Sbjct: 4795 PPPPFYLNC 4803
>gi|31657140 insulin receptor-related receptor precursor [Homo
sapiens]
Length = 1297
Score = 28.5 bits (62), Expect = 5.6
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 134 TDYECTNSTSCMTVSCPRQRYPANCTVRD---HVHCLGNRTFPK 174
TDY C S+ C V CP A CT R H CLG + P+
Sbjct: 200 TDYRCWTSSHCQRV-CPCPHGMA-CTARGECCHTECLGGCSQPE 241
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 28.1 bits (61), Expect = 7.4
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 3 GGVLPLR---GLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAEST 59
G +LP R AL LL + L EQ + + +S K+PG VVPR S
Sbjct: 4741 GRILPKRIHLRAEALPLALLCNGKNYSLHIEEQGEGVQESKKEPG------VVPRKPASF 4794
Query: 60 EIPPYVMKC 68
PP+ + C
Sbjct: 4795 PPPPFYLNC 4803
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 28.1 bits (61), Expect = 7.4
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 3 GGVLPLR---GLRALCRVLLFLSQFCILSGGEQSQALAQSIKDPGPTRTFTVVPRAAEST 59
G +LP R AL LL + L EQ + + +S K+PG VVPR S
Sbjct: 4741 GRILPKRIHLRAEALPLALLCNGKNYSLHIEEQGEGVQESKKEPG------VVPRKPASF 4794
Query: 60 EIPPYVMKC 68
PP+ + C
Sbjct: 4795 PPPPFYLNC 4803
>gi|45269141 multimerin 1 [Homo sapiens]
Length = 1228
Score = 27.7 bits (60), Expect = 9.6
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 39 SIKDPGPTRTFTVVPRAAESTEIPPYVMKCPSNGLCSRLPAD----CIDCTTNFSCTYGK 94
++K P T ++ R +T+ Y + S CSR P CI+ T+F+C
Sbjct: 1013 ALKKPTVNLTTVLIGRTQRNTDNIIYPEEYSS---CSRHPCQNGGTCINGRTSFTCACRH 1069
Query: 95 PVTFD-CAVK 103
P T D C +K
Sbjct: 1070 PFTGDNCTIK 1079
>gi|53828708 olfactory receptor, family 6, subfamily C, member 4
[Homo sapiens]
Length = 309
Score = 27.7 bits (60), Expect = 9.6
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 145 MTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNWTGGY 184
+ S RY A C ++ + +R ++++C+W GG+
Sbjct: 112 LLASMSYDRYVAICKPLHYLTIMSSRVCIQLVFCSWLGGF 151
>gi|122937283 6720455I24Rik homolog [Homo sapiens]
Length = 1413
Score = 27.7 bits (60), Expect = 9.6
Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 37/106 (34%)
Query: 81 CIDCTTNFSC------------TYGKPVTFDCAVKP---SVTCVDQDFKSQKNFIINMTC 125
C+D N++C T PV C P TCVD D
Sbjct: 402 CVDLVGNYTCLCAEPFKGLRCETGDHPVPDACLSAPCHNGGTCVDAD------------- 448
Query: 126 RFCWQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRT 171
Y C M + C R+R P +C R+ CLG T
Sbjct: 449 --------QGYVCECPEGFMGLDC-RERVPDDCECRNGGRCLGANT 485
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.141 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,851,223
Number of Sequences: 37866
Number of extensions: 513046
Number of successful extensions: 1397
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1377
Number of HSP's gapped (non-prelim): 33
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.