Guide to the Human Genome
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Name: PTPRU Sequence: fasta or formatted (1436aa) NCBI GI: 110735404
Description:

protein tyrosine phosphatase, receptor type, U isoform 1 precursor

Referenced in:

Additional Genes in Development
Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [1446aa] protein tyrosine phosphatase, receptor type, U isoform 3 precursor
alt prot [1442aa] protein tyrosine phosphatase, receptor type, U isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0        115           2
 C cysteine            2.4         34           1
 D aspartate           4.4         63           2
 E glutamate           6.7         96           3
 F phenylalanine       3.8         54           2
 G glycine             7.0        100           3
 H histidine           3.1         44           1
 I isoleucine          4.7         67           2
 K lysine              3.2         46           3
 L leucine             8.8        126           3
 M methionine          2.3         33           2
 N asparagine          3.3         48           2
 P proline             6.2         89           2
 Q glutamine           4.6         66           2
 R arginine            7.0        101           2
 S serine              6.4         92           2
 T threonine           6.3         90           2
 V valine              6.5         93           2
 W tryptophan          1.3         19           1
 Y tyrosine            4.2         60           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, U isof... 
PTPRU                 0.998   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.997   protein tyrosine phosphatase, receptor type, U isof...
PTPRK                 0.601   protein tyrosine phosphatase, receptor type, K isofo...
PTPRK                 0.599   protein tyrosine phosphatase, receptor type, K isof...
PTPRM                 0.535   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.534   protein tyrosine phosphatase, receptor type, M isof...
PTPRT                 0.521   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.518   protein tyrosine phosphatase, receptor type, T isof...
PTPRD                 0.152   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.150   protein tyrosine phosphatase, receptor type, D isofo...
PTPRF                 0.150   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.150   protein tyrosine phosphatase, receptor type, F isof...
PTPRS                 0.150   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.150   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.149   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.148   protein tyrosine phosphatase, receptor type, sigma ...
PTPRD                 0.147   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.147   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.147   protein tyrosine phosphatase, receptor type, D isofo...
PTPRA                 0.130   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.130   protein tyrosine phosphatase, receptor type, A isofor...
PTPRA                 0.130   protein tyrosine phosphatase, receptor type, A isofo...
PTPRE                 0.121   protein tyrosine phosphatase, receptor type, E isofor...
PTPRE                 0.121   protein tyrosine phosphatase, receptor type, E isofo...
PTPRZ1                0.110   protein tyrosine phosphatase, receptor-type, zeta1 p...
PTPRG                 0.108   protein tyrosine phosphatase, receptor type, G prec...
PTPRC                 0.100   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.100   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.100   protein tyrosine phosphatase, receptor type, C isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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