MKS1 37088

Name: MKS1	Sequence: fasta or formatted (559aa)		NCBI GI: 89242137
Description: Meckel syndrome, type 1		Referenced in: Planar Cell Polarity
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 27 2 C cysteine 1.1 6 1 D aspartate 4.3 24 1 E glutamate 9.7 54 4 F phenylalanine 5.0 28 2 G glycine 5.9 33 2 H histidine 2.9 16 1 I isoleucine 2.9 16 1 K lysine 3.8 21 2 L leucine 9.7 54 1 M methionine 2.0 11 1 N asparagine 2.7 15 2 P proline 4.7 26 1 Q glutamine 4.7 26 2 R arginine 8.6 48 4 S serine 7.9 44 3 T threonine 7.0 39 2 V valine 7.3 41 2 W tryptophan 1.4 8 1 Y tyrosine 3.9 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Meckel syndrome, type 1 B9D2 0.034 B9 protein domain 2 B9D1 0.026 B9 protein MICAL2 0.007 microtubule associated monoxygenase, calponin and LIM... OTOF 0.006 otoferlin isoform b OTOF 0.006 otoferlin isoform d ZAK 0.006 MLK-related kinase isoform 1 ZCCHC12 0.005 zinc finger, CCHC domain containing 12 OTOF 0.005 otoferlin isoform c OTOF 0.005 otoferlin isoform a NDOR1 0.005 NADPH dependent diflavin oxidoreductase 1 isoform d... NDOR1 0.005 NADPH dependent diflavin oxidoreductase 1 isoform c... NDOR1 0.005 NADPH dependent diflavin oxidoreductase 1 isoform a... NDOR1 0.005 NADPH dependent diflavin oxidoreductase 1 isoform b [... ARHGEF17 0.004 Rho guanine nucleotide exchange factor (GEF) 17 [Hom... C6orf222 0.004 hypothetical protein LOC389384 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.