Guide to the Human Genome
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Name: B9D1 Sequence: fasta or formatted (204aa) NCBI GI: 7661536
Description:

B9 protein

Referenced in:

Planar Cell Polarity

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          8           1
 C cysteine            1.0          2           1
 D aspartate           5.4         11           2
 E glutamate           3.9          8           2
 F phenylalanine       6.4         13           1
 G glycine             8.8         18           1
 H histidine           1.0          2           1
 I isoleucine          2.5          5           1
 K lysine              4.4          9           1
 L leucine             5.4         11           2
 M methionine          2.5          5           1
 N asparagine          2.5          5           1
 P proline             8.8         18           2
 Q glutamine           6.4         13           1
 R arginine            4.9         10           2
 S serine              7.8         16           1
 T threonine           6.9         14           1
 V valine             11.3         23           2
 W tryptophan          2.0          4           1
 Y tyrosine            4.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B9 protein 
B9D2                  0.130   B9 protein domain 2 
MKS1                  0.072   Meckel syndrome, type 1 
FAM173B               0.012   hypothetical protein LOC134145 
LOC147645             0.007   PREDICTED: hypothetical protein 
LOC147645             0.007   PREDICTED: hypothetical protein 
LOC147645             0.007   PREDICTED: hypothetical protein 
PIP4K2C               0.007   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2C               0.007   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2C               0.007   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2C               0.007   phosphatidylinositol-5-phosphate 4-kinase, type II,...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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