Search of human proteins with 8923920

Search of human proteins with 8923920

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923920 H2A histone family, member Y2 [Homo sapiens]
         (372 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923920 H2A histone family, member Y2 [Homo sapiens]               723   0.0  
gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]     499   e-141
gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]      497   e-141
gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]     497   e-141
gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]     482   e-136
gi|4504253 H2A histone family, member X [Homo sapiens]                153   3e-37
gi|28195394 histone cluster 2, H2ab [Homo sapiens]                    150   1e-36
gi|25092737 histone cluster 1, H2aa [Homo sapiens]                    150   2e-36
gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]                  149   4e-36
gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]                    149   4e-36
gi|24638446 histone cluster 2, H2ac [Homo sapiens]                    149   5e-36
gi|15617199 histone cluster 3, H2a [Homo sapiens]                     148   7e-36
gi|4504245 histone cluster 1, H2ac [Homo sapiens]                     148   9e-36
gi|19557656 histone cluster 1, H2ab [Homo sapiens]                    147   2e-35
gi|10645195 histone cluster 1, H2ae [Homo sapiens]                    147   2e-35
gi|10800130 histone cluster 1, H2ad [Homo sapiens]                    147   2e-35
gi|29553970 H2A histone family, member J [Homo sapiens]               147   2e-35
gi|10800132 histone cluster 1, H2ag [Homo sapiens]                    147   2e-35
gi|4504239 histone cluster 1, H2ai [Homo sapiens]                     147   2e-35
gi|18105045 histone cluster 1, H2ah [Homo sapiens]                    147   2e-35
gi|4504241 histone cluster 1, H2ak [Homo sapiens]                     147   2e-35
gi|4504249 histone cluster 1, H2am [Homo sapiens]                     147   2e-35
gi|4504243 histone cluster 1, H2al [Homo sapiens]                     147   2e-35
gi|10800144 histone cluster 1, H2aj [Homo sapiens]                    147   2e-35
gi|4504255 H2A histone family, member Z [Homo sapiens]                121   9e-28
gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]      120   2e-27
gi|41406067 H2A histone family, member V isoform 3 [Homo sapiens]     104   1e-22
gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]     103   3e-22
gi|63029943 H2A histone family, member B2 [Homo sapiens]               73   4e-13
gi|63029935 H2A histone family, member B3 [Homo sapiens]               73   4e-13

>gi|8923920 H2A histone family, member Y2 [Homo sapiens]
          Length = 372

 Score =  723 bits (1866), Expect = 0.0
 Identities = 372/372 (100%), Positives = 372/372 (100%)

Query: 1   MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI 60
           MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI
Sbjct: 1   MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI 60

Query: 61  LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT 120
           LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT
Sbjct: 61  LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT 120

Query: 121 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG 180
           KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG
Sbjct: 121 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG 180

Query: 181 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE 240
           DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE
Sbjct: 181 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE 240

Query: 241 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA 300
           FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA
Sbjct: 241 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA 300

Query: 301 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG 360
           AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG
Sbjct: 301 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG 360

Query: 361 IYVQEMAKLDAK 372
           IYVQEMAKLDAK
Sbjct: 361 IYVQEMAKLDAK 372


>gi|93141018 H2A histone family, member Y isoform 3 [Homo sapiens]
          Length = 372

 Score =  499 bits (1284), Expect = e-141
 Identities = 252/371 (67%), Positives = 297/371 (80%)

Query: 1   MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI 60
           MS R GKKK +K SRSA+AGVIFPVGR++RY+KKG  KYRI VGAPVYMAAV+EYL AEI
Sbjct: 1   MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI 60

Query: 61  LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT 120
           LELAGNAARDNKK R+ PRHILLAVANDEELNQLLKGVTIASGGVLP IHPELLAKKRG+
Sbjct: 61  LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120

Query: 121 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG 180
           KGK E I++PPP K+ +  +  K   KK+   K     K K  +  K  +++ST+E  P 
Sbjct: 121 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA 180

Query: 181 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE 240
           DGFT+LS+KSL LGQKL+L  S+IS++    VE I++PT A+IDLK+D+G  LEK GGKE
Sbjct: 181 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE 240

Query: 241 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA 300
           F+E V ELRK  GPLEVA AAVS   GL AKFVIHC+ P WG+DKCEE LE+T+KNCL+ 
Sbjct: 241 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL 300

Query: 301 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG 360
           A+DKKLKS+AFP   SGRN FPKQTAAQ+ LKAIS++F  + +SS+K VYF+LFDSESIG
Sbjct: 301 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG 360

Query: 361 IYVQEMAKLDA 371
           IYVQEMAKLDA
Sbjct: 361 IYVQEMAKLDA 371


>gi|4758496 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  497 bits (1279), Expect = e-141
 Identities = 254/371 (68%), Positives = 297/371 (80%), Gaps = 1/371 (0%)

Query: 1   MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI 60
           MS R GKKK +K SRSA+AGVIFPVGR++RY+KKG  KYRI VGAPVYMAAV+EYL AEI
Sbjct: 1   MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI 60

Query: 61  LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT 120
           LELAGNAARDNKK R+ PRHILLAVANDEELNQLLKGVTIASGGVLP IHPELLAKKRG+
Sbjct: 61  LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120

Query: 121 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG 180
           KGK E I++PPP K+  K+ S KK   K    K    K  K  +  K  +++ST+E  P 
Sbjct: 121 KGKLEAIITPPPAKKA-KSPSQKKPVSKKAGGKKGARKSKKQGEVSKAASADSTTEGTPA 179

Query: 181 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE 240
           DGFT+LS+KSL LGQKL+L  S+IS++    VE I++PT A+IDLK+D+G  LEK GGKE
Sbjct: 180 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE 239

Query: 241 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA 300
           F+E V ELRK  GPLEVA AAVS   GL AKFVIHC+ P WG+DKCEE LE+T+KNCL+ 
Sbjct: 240 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL 299

Query: 301 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG 360
           A+DKKLKS+AFP   SGRN FPKQTAAQ+ LKAIS++F  + +SS+K VYF+LFDSESIG
Sbjct: 300 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG 359

Query: 361 IYVQEMAKLDA 371
           IYVQEMAKLDA
Sbjct: 360 IYVQEMAKLDA 370


>gi|93141020 H2A histone family, member Y isoform 2 [Homo sapiens]
          Length = 371

 Score =  497 bits (1279), Expect = e-141
 Identities = 254/371 (68%), Positives = 297/371 (80%), Gaps = 1/371 (0%)

Query: 1   MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI 60
           MS R GKKK +K SRSA+AGVIFPVGR++RY+KKG  KYRI VGAPVYMAAV+EYL AEI
Sbjct: 1   MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI 60

Query: 61  LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT 120
           LELAGNAARDNKK R+ PRHILLAVANDEELNQLLKGVTIASGGVLP IHPELLAKKRG+
Sbjct: 61  LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120

Query: 121 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG 180
           KGK E I++PPP K+  K+ S KK   K    K    K  K  +  K  +++ST+E  P 
Sbjct: 121 KGKLEAIITPPPAKKA-KSPSQKKPVSKKAGGKKGARKSKKQGEVSKAASADSTTEGTPA 179

Query: 181 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE 240
           DGFT+LS+KSL LGQKL+L  S+IS++    VE I++PT A+IDLK+D+G  LEK GGKE
Sbjct: 180 DGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINPTNADIDLKDDLGNTLEKKGGKE 239

Query: 241 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA 300
           F+E V ELRK  GPLEVA AAVS   GL AKFVIHC+ P WG+DKCEE LE+T+KNCL+ 
Sbjct: 240 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL 299

Query: 301 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG 360
           A+DKKLKS+AFP   SGRN FPKQTAAQ+ LKAIS++F  + +SS+K VYF+LFDSESIG
Sbjct: 300 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG 359

Query: 361 IYVQEMAKLDA 371
           IYVQEMAKLDA
Sbjct: 360 IYVQEMAKLDA 370


>gi|20336746 H2A histone family, member Y isoform 1 [Homo sapiens]
          Length = 369

 Score =  482 bits (1240), Expect = e-136
 Identities = 246/371 (66%), Positives = 291/371 (78%), Gaps = 3/371 (0%)

Query: 1   MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEI 60
           MS R GKKK +K SRSA+AGVIFPVGR++RY+KKG  KYRI VGAPVYMAAV+EYL AEI
Sbjct: 1   MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI 60

Query: 61  LELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGT 120
           LELAGNAARDNKK R+ PRHILLAVANDEELNQLLKGVTIASGGVLP IHPELLAKKRG+
Sbjct: 61  LELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGVLPNIHPELLAKKRGS 120

Query: 121 KGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDGPG 180
           KGK E I++PPP K+ +  +  K   KK+   K     K K  +  K  +++ST+E  P 
Sbjct: 121 KGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKKKQGEVSKAASADSTTEGTPA 180

Query: 181 DGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKE 240
           DGFT+LS+KSL LGQKL + Q+DI+ I S   + +VHPT  +  +  ++G  LEK GGKE
Sbjct: 181 DGFTVLSTKSLFLGQKLQVVQADIASIDS---DAVVHPTNTDFYIGGEVGNTLEKKGGKE 237

Query: 241 FLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCLSA 300
           F+E V ELRK  GPLEVA AAVS   GL AKFVIHC+ P WG+DKCEE LE+T+KNCL+ 
Sbjct: 238 FVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHCNSPVWGADKCEELLEKTVKNCLAL 297

Query: 301 AEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSESIG 360
           A+DKKLKS+AFP   SGRN FPKQTAAQ+ LKAIS++F  + +SS+K VYF+LFDSESIG
Sbjct: 298 ADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVYFVLFDSESIG 357

Query: 361 IYVQEMAKLDA 371
           IYVQEMAKLDA
Sbjct: 358 IYVQEMAKLDA 368


>gi|4504253 H2A histone family, member X [Homo sapiens]
          Length = 143

 Score =  153 bits (386), Expect = 3e-37
 Identities = 84/147 (57%), Positives = 100/147 (68%), Gaps = 9/147 (6%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL GVTIA GGVLP I   LL K 
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPK- 119

Query: 118 RGTKGKSETILSPPPEKRGRKATSGKK 144
                K+   + P     G+KAT   +
Sbjct: 120 -----KTSATVGPKAPSGGKKATQASQ 141


>gi|28195394 histone cluster 2, H2ab [Homo sapiens]
          Length = 130

 Score =  150 bits (380), Expect = 1e-36
 Identities = 80/120 (66%), Positives = 91/120 (75%), Gaps = 3/120 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LAV NDEELN+LL GVTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120


>gi|25092737 histone cluster 1, H2aa [Homo sapiens]
          Length = 131

 Score =  150 bits (379), Expect = 2e-36
 Identities = 79/120 (65%), Positives = 91/120 (75%), Gaps = 3/120 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  RI  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKSKSRSSRAGLQFPVGRIHRLLRKGNYAERIGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNA+RDNKK RI PRH+ LA+ NDEELN+LL GVTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNASRDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 120


>gi|106775678 histone cluster 2, H2aa4 [Homo sapiens]
          Length = 130

 Score =  149 bits (376), Expect = 4e-36
 Identities = 80/128 (62%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVYMAAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|4504251 histone cluster 2, H2aa3 [Homo sapiens]
          Length = 130

 Score =  149 bits (376), Expect = 4e-36
 Identities = 80/128 (62%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVYMAAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|24638446 histone cluster 2, H2ac [Homo sapiens]
          Length = 129

 Score =  149 bits (375), Expect = 5e-36
 Identities = 82/129 (63%), Positives = 94/129 (72%), Gaps = 4/129 (3%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVYMAAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 -RGTKGKSE 125
               K KS+
Sbjct: 121 TESHKAKSK 129


>gi|15617199 histone cluster 3, H2a [Homo sapiens]
          Length = 130

 Score =  148 bits (374), Expect = 7e-36
 Identities = 79/128 (61%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|4504245 histone cluster 1, H2ac [Homo sapiens]
          Length = 130

 Score =  148 bits (373), Expect = 9e-36
 Identities = 79/128 (61%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|19557656 histone cluster 1, H2ab [Homo sapiens]
          Length = 130

 Score =  147 bits (371), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|10645195 histone cluster 1, H2ae [Homo sapiens]
          Length = 130

 Score =  147 bits (371), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|10800130 histone cluster 1, H2ad [Homo sapiens]
          Length = 130

 Score =  147 bits (371), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|29553970 H2A histone family, member J [Homo sapiens]
          Length = 129

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/120 (65%), Positives = 90/120 (75%), Gaps = 3/120 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    SRS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120


>gi|10800132 histone cluster 1, H2ag [Homo sapiens]
          Length = 130

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|4504239 histone cluster 1, H2ai [Homo sapiens]
          Length = 130

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|18105045 histone cluster 1, H2ah [Homo sapiens]
          Length = 128

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|4504241 histone cluster 1, H2ak [Homo sapiens]
          Length = 130

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|4504249 histone cluster 1, H2am [Homo sapiens]
          Length = 130

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|4504243 histone cluster 1, H2al [Homo sapiens]
          Length = 130

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKAK 128


>gi|10800144 histone cluster 1, H2aj [Homo sapiens]
          Length = 128

 Score =  147 bits (370), Expect = 2e-35
 Identities = 78/128 (60%), Positives = 94/128 (73%), Gaps = 3/128 (2%)

Query: 1   MSGRS---GKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLA 57
           MSGR    GK +    +RS+RAG+ FPVGR+ R L+KG +  R+  GAPVY+AAV+EYL 
Sbjct: 1   MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 60

Query: 58  AEILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AEILELAGNAARDNKK RI PRH+ LA+ NDEELN+LL  VTIA GGVLP I   LL KK
Sbjct: 61  AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120

Query: 118 RGTKGKSE 125
             +  K++
Sbjct: 121 TESHHKTK 128


>gi|4504255 H2A histone family, member Z [Homo sapiens]
          Length = 128

 Score =  121 bits (304), Expect = 9e-28
 Identities = 66/124 (53%), Positives = 86/124 (69%), Gaps = 6/124 (4%)

Query: 5   SGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILEL 63
           SGK K   +SRS RAG+ FPVGR+ R+LK  T  + R+   A VY AA++EYL AE+LEL
Sbjct: 10  SGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLEL 69

Query: 64  AGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKRGTKGK 123
           AGNA++D K  RI PRH+ LA+  DEEL+ L+K  TIA GGV+P IH  L+    G KG+
Sbjct: 70  AGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLI----GKKGQ 124

Query: 124 SETI 127
            +T+
Sbjct: 125 QKTV 128


>gi|6912616 H2A histone family, member V isoform 1 [Homo sapiens]
          Length = 128

 Score =  120 bits (302), Expect = 2e-27
 Identities = 64/114 (56%), Positives = 81/114 (71%), Gaps = 2/114 (1%)

Query: 5   SGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILEL 63
           SGK K   +SRS RAG+ FPVGR+ R+LK  T  + R+   A VY AA++EYL AE+LEL
Sbjct: 10  SGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLEL 69

Query: 64  AGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           AGNA++D K  RI PRH+ LA+  DEEL+ L+K  TIA GGV+P IH  L+ KK
Sbjct: 70  AGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 122


>gi|41406067 H2A histone family, member V isoform 3 [Homo sapiens]
          Length = 102

 Score =  104 bits (260), Expect = 1e-22
 Identities = 54/97 (55%), Positives = 70/97 (72%), Gaps = 2/97 (2%)

Query: 22  IFPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILELAGNAARDNKKARIAPRH 80
           +FPVGR+ R+LK  T  + R+   A VY AA++EYL AE+LELAGNA++D K  RI PRH
Sbjct: 1   MFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRH 60

Query: 81  ILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKK 117
           + LA+  DEEL+ L+K  TIA GGV+P IH  L+ KK
Sbjct: 61  LQLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 96


>gi|20357599 H2A histone family, member V isoform 2 [Homo sapiens]
          Length = 114

 Score =  103 bits (256), Expect = 3e-22
 Identities = 56/100 (56%), Positives = 71/100 (71%), Gaps = 2/100 (2%)

Query: 5   SGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKY-RISVGAPVYMAAVIEYLAAEILEL 63
           SGK K   +SRS RAG+ FPVGR+ R+LK  T  + R+   A VY AA++EYL AE+LEL
Sbjct: 10  SGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLEL 69

Query: 64  AGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASG 103
           AGNA++D K  RI PRH+ LA+  DEEL+ L+K  TIA G
Sbjct: 70  AGNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGG 108


>gi|63029943 H2A histone family, member B2 [Homo sapiens]
          Length = 115

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 2/100 (2%)

Query: 2   SGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEIL 61
           SG  G+ +    SR+ RA + F V ++ R L++G +  R+S  APVY+AAVIEYL A++L
Sbjct: 11  SGAGGRGRTC--SRTVRAELSFSVSQVERSLREGHYAQRLSRTAPVYLAAVIEYLTAKVL 68

Query: 62  ELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIA 101
           ELAGN A+++ +  I P  + + V ND  L+ L    TI+
Sbjct: 69  ELAGNEAQNSGERNITPLLLDMVVHNDRLLSTLFNTTTIS 108


>gi|63029935 H2A histone family, member B3 [Homo sapiens]
          Length = 115

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 2/100 (2%)

Query: 2   SGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEIL 61
           SG  G+ +    SR+ RA + F V ++ R L++G +  R+S  APVY+AAVIEYL A++L
Sbjct: 11  SGAGGRGRTC--SRTVRAELSFSVSQVERSLREGHYAQRLSRTAPVYLAAVIEYLTAKVL 68

Query: 62  ELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIA 101
           ELAGN A+++ +  I P  + + V ND  L+ L    TI+
Sbjct: 69  ELAGNEAQNSGERNITPLLLDMVVHNDRLLSTLFNTTTIS 108


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.129    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,672,308
Number of Sequences: 37866
Number of extensions: 618595
Number of successful extensions: 3597
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 3244
Number of HSP's gapped (non-prelim): 441
length of query: 372
length of database: 18,247,518
effective HSP length: 104
effective length of query: 268
effective length of database: 14,309,454
effective search space: 3834933672
effective search space used: 3834933672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.