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Search of human proteins with 14150145
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14150145 matrix-remodelling associated 8 [Homo sapiens]
(442 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14150145 matrix-remodelling associated 8 [Homo sapiens] 904 0.0
gi|55953133 immunoglobulin superfamily, member 3 isoform 1 [Homo... 42 9e-04
gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo... 42 9e-04
gi|148539858 protein tyrosine phosphatase, receptor type, T isof... 42 0.001
gi|56788393 myelin oligodendrocyte glycoprotein isoform beta5 pr... 41 0.002
gi|56788391 myelin oligodendrocyte glycoprotein isoform beta2 pr... 41 0.002
gi|56788389 myelin oligodendrocyte glycoprotein isoform alpha3 p... 41 0.002
gi|56788387 myelin oligodendrocyte glycoprotein isoform beta3 pr... 41 0.002
gi|56788385 myelin oligodendrocyte glycoprotein isoform beta1 pr... 41 0.002
gi|56788383 myelin oligodendrocyte glycoprotein isoform alpha2 p... 41 0.002
gi|56788381 myelin oligodendrocyte glycoprotein isoform alpha1 p... 41 0.002
gi|126362957 leukocyte immunoglobulin-like receptor, subfamily B... 40 0.003
gi|116488411 leukocyte immunoglobulin-like receptor, subfamily B... 40 0.003
gi|125988398 leukocyte immunoglobulin-like receptor, subfamily B... 40 0.004
gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 40 0.004
gi|148539860 protein tyrosine phosphatase, receptor type, T isof... 40 0.006
gi|126362953 leukocyte immunoglobulin-like receptor, subfamily B... 39 0.012
gi|126362951 leukocyte immunoglobulin-like receptor, subfamily B... 39 0.012
gi|144226847 obscurin-like 1 [Homo sapiens] 38 0.016
gi|125988400 leukocyte immunoglobulin-like receptor, subfamily B... 38 0.016
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42... 38 0.016
gi|169208448 PREDICTED: similar to hCG1812074 [Homo sapiens] 37 0.036
gi|62339432 platelet receptor Gi24 [Homo sapiens] 37 0.036
gi|239756231 PREDICTED: similar to hCG1812074 [Homo sapiens] 37 0.047
gi|239750771 PREDICTED: similar to hCG1812074 [Homo sapiens] 37 0.047
gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4 pr... 37 0.047
gi|56788395 myelin oligodendrocyte glycoprotein isoform alpha4 p... 37 0.047
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 36 0.061
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens] 36 0.061
gi|11141887 brain link protein-1 [Homo sapiens] 36 0.061
>gi|14150145 matrix-remodelling associated 8 [Homo sapiens]
Length = 442
Score = 904 bits (2337), Expect = 0.0
Identities = 442/442 (100%), Positives = 442/442 (100%)
Query: 1 MALPSRILLWKLVLLQSSAVLLHSGSSVPAAAGSSVVSESAVSWEAGARAVLRCQSPRMV 60
MALPSRILLWKLVLLQSSAVLLHSGSSVPAAAGSSVVSESAVSWEAGARAVLRCQSPRMV
Sbjct: 1 MALPSRILLWKLVLLQSSAVLLHSGSSVPAAAGSSVVSESAVSWEAGARAVLRCQSPRMV 60
Query: 61 WTQDRLHDRQRVLHWDLRGPGGGPARRLLDLYSAGEQRVYEARDRGRLELSASAFDDGNF 120
WTQDRLHDRQRVLHWDLRGPGGGPARRLLDLYSAGEQRVYEARDRGRLELSASAFDDGNF
Sbjct: 61 WTQDRLHDRQRVLHWDLRGPGGGPARRLLDLYSAGEQRVYEARDRGRLELSASAFDDGNF 120
Query: 121 SLLIRAVEETDAGLYTCNLHHHYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGA 180
SLLIRAVEETDAGLYTCNLHHHYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGA
Sbjct: 121 SLLIRAVEETDAGLYTCNLHHHYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGA 180
Query: 181 PALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYASGERRAYGPLFLR 240
PALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYASGERRAYGPLFLR
Sbjct: 181 PALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYASGERRAYGPLFLR 240
Query: 241 DRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPPP 300
DRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPPP
Sbjct: 241 DRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPPP 300
Query: 301 RGSPGNGSSHSGAPGPDPTLARGHNVINVIVPESRAHFFQQLGYVLATLLLFILLLVTVL 360
RGSPGNGSSHSGAPGPDPTLARGHNVINVIVPESRAHFFQQLGYVLATLLLFILLLVTVL
Sbjct: 301 RGSPGNGSSHSGAPGPDPTLARGHNVINVIVPESRAHFFQQLGYVLATLLLFILLLVTVL 360
Query: 361 LAARRRRGGYEYSDQKSGKSKGKDVNLAEFAVAAGDQMLYRSEDIQLDYKNNILKERAEL 420
LAARRRRGGYEYSDQKSGKSKGKDVNLAEFAVAAGDQMLYRSEDIQLDYKNNILKERAEL
Sbjct: 361 LAARRRRGGYEYSDQKSGKSKGKDVNLAEFAVAAGDQMLYRSEDIQLDYKNNILKERAEL 420
Query: 421 AHSPLPAKYIDLDKGFRKENCK 442
AHSPLPAKYIDLDKGFRKENCK
Sbjct: 421 AHSPLPAKYIDLDKGFRKENCK 442
>gi|55953133 immunoglobulin superfamily, member 3 isoform 1 [Homo
sapiens]
Length = 1214
Score = 42.4 bits (98), Expect = 9e-04
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 75 WDLRGPGGGPARRLLDLY--SAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEET 130
W + P + +L SA E Y + R RL+ G FSL ++ E +
Sbjct: 737 WYVHKPSDADGKLILKTTHNSAFEYGTYAEEEGLRARLQFERHV-SGGLFSLTVQRAEVS 795
Query: 131 DAGLYTCNL-------HHHYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPAL 183
D+G Y C++ ++ + L E ++ R EVT P + + L+V
Sbjct: 796 DSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLRLSQAQGNLSVLETRQVQ 855
Query: 184 LTCV--NRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYAS---GERRAYGPLF 238
L CV NR + +Q +V W P P L A+ GE+ A L
Sbjct: 856 LECVVLNRTSI-------TSQLMVEWFVWKPNHPERETVARLSRDATFHYGEQAAKNNLK 908
Query: 239 LRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHL 274
R + ++ G + L I+ + V D GTYSCH+
Sbjct: 909 GR----LHLESPSPGVYRLFIQNVAVQDSGTYSCHV 940
Score = 42.0 bits (97), Expect = 0.001
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 23/183 (12%)
Query: 103 RDRGRLELSASAFDDGNFSLLIRAVEETDAGLYTC-------NLHHHYCHLYESLAVRLE 155
R R +E + S+ N L I +T+AG Y C N ++ + L E + LE
Sbjct: 634 RTRTAIEKAESS---NNVRLSISRASDTEAGKYQCVAELWRKNYNNTWTRLAERTSNLLE 690
Query: 156 VTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVP 215
+ P T K L + P L C + + H V W P
Sbjct: 691 IRVLQPVTKLQVSKSKRTLTLVENKPIQLNCSVKSQTSQNSHF-----AVLWYVHKPS-- 743
Query: 216 HDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFER----GDFSLRIEPLEVADEGTYS 271
D +L+ YG + + FER G FSL ++ EV+D G+Y
Sbjct: 744 -DADGKLILKTTHNSAFEYGTYAEEEGLRARLQ-FERHVSGGLFSLTVQRAEVSDSGSYY 801
Query: 272 CHL 274
CH+
Sbjct: 802 CHV 804
>gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo
sapiens]
Length = 1194
Score = 42.4 bits (98), Expect = 9e-04
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 75 WDLRGPGGGPARRLLDLY--SAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEET 130
W + P + +L SA E Y + R RL+ G FSL ++ E +
Sbjct: 717 WYVHKPSDADGKLILKTTHNSAFEYGTYAEEEGLRARLQFERHV-SGGLFSLTVQRAEVS 775
Query: 131 DAGLYTCNL-------HHHYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPAL 183
D+G Y C++ ++ + L E ++ R EVT P + + L+V
Sbjct: 776 DSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEVTVKQPDSRLRLSQAQGNLSVLETRQVQ 835
Query: 184 LTCV--NRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYAS---GERRAYGPLF 238
L CV NR + +Q +V W P P L A+ GE+ A L
Sbjct: 836 LECVVLNRTSI-------TSQLMVEWFVWKPNHPERETVARLSRDATFHYGEQAAKNNLK 888
Query: 239 LRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHL 274
R + ++ G + L I+ + V D GTYSCH+
Sbjct: 889 GR----LHLESPSPGVYRLFIQNVAVQDSGTYSCHV 920
Score = 42.0 bits (97), Expect = 0.001
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 23/183 (12%)
Query: 103 RDRGRLELSASAFDDGNFSLLIRAVEETDAGLYTC-------NLHHHYCHLYESLAVRLE 155
R R +E + S+ N L I +T+AG Y C N ++ + L E + LE
Sbjct: 614 RTRTAIEKAESS---NNVRLSISRASDTEAGKYQCVAELWRKNYNNTWTRLAERTSNLLE 670
Query: 156 VTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVP 215
+ P T K L + P L C + + H V W P
Sbjct: 671 IRVLQPVTKLQVSKSKRTLTLVENKPIQLNCSVKSQTSQNSHF-----AVLWYVHKPS-- 723
Query: 216 HDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFER----GDFSLRIEPLEVADEGTYS 271
D +L+ YG + + FER G FSL ++ EV+D G+Y
Sbjct: 724 -DADGKLILKTTHNSAFEYGTYAEEEGLRARLQ-FERHVSGGLFSLTVQRAEVSDSGSYY 781
Query: 272 CHL 274
CH+
Sbjct: 782 CHV 784
>gi|148539858 protein tyrosine phosphatase, receptor type, T isoform
1 precursor [Homo sapiens]
Length = 1460
Score = 41.6 bits (96), Expect = 0.001
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 260 EPLEVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPP-------PRGSPGNGSSHSG 312
+P V D TY+ + + L ++ +++ + E + G+ G
Sbjct: 677 QPFTVGDNKTYNGYWNPPLSPLKSYSIYFQALSKANGETKINCVRLATKAPMGSAQVTPG 736
Query: 313 APGPDPTLARGHNVINVIVPESRAHFFQQLGYVLATLLLFILLLVTVLLAARRRRGGYEY 372
P T N + PE + ++ V+A LL+FI++L+ V+L +RRR Y Y
Sbjct: 737 TPLCLLTTGASTQNSNTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAYSY 796
Query: 373 S 373
S
Sbjct: 797 S 797
>gi|56788393 myelin oligodendrocyte glycoprotein isoform beta5
precursor [Homo sapiens]
Length = 213
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|56788391 myelin oligodendrocyte glycoprotein isoform beta2
precursor [Homo sapiens]
Length = 206
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|56788389 myelin oligodendrocyte glycoprotein isoform alpha3
precursor [Homo sapiens]
Length = 224
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|56788387 myelin oligodendrocyte glycoprotein isoform beta3
precursor [Homo sapiens]
Length = 229
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|56788385 myelin oligodendrocyte glycoprotein isoform beta1
precursor [Homo sapiens]
Length = 252
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|56788383 myelin oligodendrocyte glycoprotein isoform alpha2
precursor [Homo sapiens]
Length = 208
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|56788381 myelin oligodendrocyte glycoprotein isoform alpha1
precursor [Homo sapiens]
Length = 247
Score = 40.8 bits (94), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVW 193
H E A+ L+V D P YW VL + P LL + G ++
Sbjct: 132 H--SYQEEAAMELKVED-----PFYW-VSPGVLVLLAVLPVLLLQITVGLIF 175
Score = 32.0 bits (71), Expect = 1.2
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEP 294
+DEG ++C H E L V +P
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEDP 147
>gi|126362957 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 4 [Homo sapiens]
Length = 651
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 261 PLEVADEGTYSCHLHHH---YCGLHERRVFHLTVAEPHAEPPPRGSPGNGSSHSGAPGPD 317
P+ A GTY C+ Y H L V+ P P SP G + + P
Sbjct: 386 PVTSAHAGTYRCYGSQSSKPYLLTHPSDPLELVVSGPSGGP---SSPTTGPTSTSGPEDQ 442
Query: 318 PTLARGHNVINVIVPESRA--HFFQQLGYVLATLLLFILLLVTVLLAARRRRGGYEYSDQ 375
P G + P+S H +G ++A +LL +LLL+ L+ RR+G + S Q
Sbjct: 443 PLTPTGSD------PQSGLGRHLGVVIGILVAVILLLLLLLLLFLILRHRRQGKHWTSTQ 496
Query: 376 K 376
+
Sbjct: 497 R 497
>gi|116488411 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 1 [Homo sapiens]
Length = 650
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 261 PLEVADEGTYSCHLHHH---YCGLHERRVFHLTVAEPHAEPPPRGSPGNGSSHSGAPGPD 317
P+ A GTY C+ Y H L V+ P P SP G + + P
Sbjct: 386 PVTSAHAGTYRCYGSQSSKPYLLTHPSDPLELVVSGPSGGP---SSPTTGPTSTSGPEDQ 442
Query: 318 PTLARGHNVINVIVPESRA--HFFQQLGYVLATLLLFILLLVTVLLAARRRRGGYEYSDQ 375
P G + P+S H +G ++A +LL +LLL+ L+ RR+G + S Q
Sbjct: 443 PLTPTGSD------PQSGLGRHLGVVIGILVAVILLLLLLLLLFLILRHRRQGKHWTSTQ 496
Query: 376 K 376
+
Sbjct: 497 R 497
>gi|125988398 leukocyte immunoglobulin-like receptor, subfamily B,
member 2 isoform 2 [Homo sapiens]
Length = 597
Score = 40.0 bits (92), Expect = 0.004
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 259 IEPLEVADEGTYSCHLHHH---YCGLHERRVFHLTVAEPH--AEPPPRG---SPGNGSSH 310
+ P+ A GTY C+ + Y H L V+ P + PPP G +PG
Sbjct: 383 MSPVTSAHAGTYRCYGSLNSDPYLLSHPSEPLELVVSGPSMGSSPPPTGPISTPGPEDQP 442
Query: 311 SGAPGPDPTLARGHNVINVIVPESRAHFFQQLGYVLATLLLFILLLVTVLLAARRRRGGY 370
G DP G ++ VI G ++A +LL +LLL+ L+ RR+G +
Sbjct: 443 LTPTGSDPQSGLGRHLGVVI------------GILVAVVLLLLLLLLLFLILRHRRQGKH 490
Query: 371 EYSDQK 376
S Q+
Sbjct: 491 WTSTQR 496
>gi|167614500 lymphocyte-activation protein 3 precursor [Homo
sapiens]
Length = 525
Score = 40.0 bits (92), Expect = 0.004
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 251 ERGDFSLRIEPLEVADEGTYSCHLHHHYCGLHERRV-FHLTVAEPHAEPPPRGSPGN 306
+ GDF+LR+E + A GTY+CH+H L E+++ +T+A P GSPG+
Sbjct: 312 DNGDFTLRLEDVSQAQAGTYTCHIH-----LQEQQLNATVTLAIITVTPKSFGSPGS 363
Score = 36.2 bits (82), Expect = 0.061
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 215 PHDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHL 274
P R +L + G R G L L+ RV + +RGDFSL + P AD G Y +
Sbjct: 94 PRPRRYTVLSVGPGGLRS--GRLPLQPRVQLDERGRQRGDFSLWLRPARRADAGEYRAAV 151
Query: 275 HHHYCGLHERRVFHLTVAEPHAEPP 299
H L R L A A PP
Sbjct: 152 HLRDRALSCRLRLRLGQASMTASPP 176
Score = 35.4 bits (80), Expect = 0.10
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 32/95 (33%)
Query: 46 AGARAVLRCQSPRMVWTQDRLHDRQRVLHWDLRGPGGGPARRLLDLYSAGEQRVYEARDR 105
AG+R L C+ P V T+ L + W PGGGP DL G
Sbjct: 274 AGSRVGLPCRLPAGVGTRSFLTAK-----WT--PPGGGP-----DLLVTG---------- 311
Query: 106 GRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLH 140
D+G+F+L + V + AG YTC++H
Sbjct: 312 ----------DNGDFTLRLEDVSQAQAGTYTCHIH 336
>gi|148539860 protein tyrosine phosphatase, receptor type, T isoform
2 precursor [Homo sapiens]
Length = 1441
Score = 39.7 bits (91), Expect = 0.006
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 328 NVIVPESRAHFFQQLGYVLATLLLFILLLVTVLLAARRRRGGYEYS 373
N + PE + ++ V+A LL+FI++L+ V+L +RRR Y YS
Sbjct: 733 NTVEPEKQVDNTVKMAGVIAGLLMFIIILLGVMLTIKRRRNAYSYS 778
>gi|126362953 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 3 [Homo sapiens]
Length = 651
Score = 38.5 bits (88), Expect = 0.012
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 261 PLEVADEGTYSCHLHHH---YCGLHERRVFHLTVAEPHAEPPPRGSPGNG-SSHSGAPGP 316
P+ A GTY C+ Y H L V+ P P SP G +S S P
Sbjct: 386 PVTSAHAGTYRCYGSQSSKPYLLTHPSDPLELVVSGPSGGP---SSPTTGPTSTSAGPED 442
Query: 317 DPTLARGHNVINVIVPESRA--HFFQQLGYVLATLLLFILLLVTVLLAARRRRGGYEYSD 374
P G + P+S H +G ++A +LL +LLL+ L+ RR+G + S
Sbjct: 443 QPLTPTGSD------PQSGLGRHLGVVIGILVAVILLLLLLLLLFLILRHRRQGKHWTST 496
Query: 375 QK 376
Q+
Sbjct: 497 QR 498
>gi|126362951 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 2 [Homo sapiens]
Length = 652
Score = 38.5 bits (88), Expect = 0.012
Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 261 PLEVADEGTYSCHLHHH---YCGLHERRVFHLTVAEPHAEPPPRGSPGNG-SSHSGAPGP 316
P+ A GTY C+ Y H L V+ P P SP G +S S P
Sbjct: 386 PVTSAHAGTYRCYGSQSSKPYLLTHPSDPLELVVSGPSGGP---SSPTTGPTSTSAGPED 442
Query: 317 DPTLARGHNVINVIVPESRA--HFFQQLGYVLATLLLFILLLVTVLLAARRRRGGYEYSD 374
P G + P+S H +G ++A +LL +LLL+ L+ RR+G + S
Sbjct: 443 QPLTPTGSD------PQSGLGRHLGVVIGILVAVILLLLLLLLLFLILRHRRQGKHWTST 496
Query: 375 QK 376
Q+
Sbjct: 497 QR 498
>gi|144226847 obscurin-like 1 [Homo sapiens]
Length = 1896
Score = 38.1 bits (87), Expect = 0.016
Identities = 48/201 (23%), Positives = 71/201 (35%), Gaps = 17/201 (8%)
Query: 104 DRGRLELSASA-----FDDGNFSLLIRAVEETDAGLYTCNLHHHYCHLYESLAVRLEVTD 158
++G +L+AS D LL+ A TDAG+Y C + Y + AV V +
Sbjct: 46 EKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT--VLE 103
Query: 159 GPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDR 218
P + P E+ + + G A + W R E P + ++
Sbjct: 104 PPASDPELQPAERPLPSPGSGEGAPVFLTGPRSQWVLRGAEVVLTCRAGGLPEPTLYWEK 163
Query: 219 ADRLLDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHY 278
LD A P R G A +LRI + D G Y CH + +
Sbjct: 164 DGMALDEVWDSSHFALQP----GRAEDGPGA----SLALRILAARLPDSGVYVCHARNAH 215
Query: 279 CGLHERRVFHLTVAEPHAEPP 299
H + L V +P PP
Sbjct: 216 G--HAQAGALLQVHQPPESPP 234
>gi|125988400 leukocyte immunoglobulin-like receptor, subfamily B,
member 2 isoform 1 [Homo sapiens]
Length = 598
Score = 38.1 bits (87), Expect = 0.016
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 259 IEPLEVADEGTYSCHLHHH---YCGLHERRVFHLTVAEPH--AEPPPRGSPGNGSSHSGA 313
+ P+ A GTY C+ + Y H L V+ P + PPP G +
Sbjct: 383 MSPVTSAHAGTYRCYGSLNSDPYLLSHPSEPLELVVSGPSMGSSPPPTGPISTPAGPEDQ 442
Query: 314 P----GPDPTLARGHNVINVIVPESRAHFFQQLGYVLATLLLFILLLVTVLLAARRRRGG 369
P G DP G ++ VI G ++A +LL +LLL+ L+ RR+G
Sbjct: 443 PLTPTGSDPQSGLGRHLGVVI------------GILVAVVLLLLLLLLLFLILRHRRQGK 490
Query: 370 YEYSDQK 376
+ S Q+
Sbjct: 491 HWTSTQR 497
>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
precursor [Homo sapiens]
Length = 2012
Score = 38.1 bits (87), Expect = 0.016
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 49/186 (26%)
Query: 119 NFSLLIRAVEETDAGLYTCNLHHHYC-----HLYESLAVRLEVTDGPPATPAYWDGEKEV 173
N SLLI+ V E D+G Y C + + +Y ++ + +T P T A +KE+
Sbjct: 748 NGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEM 807
Query: 174 LAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYASGERRA 233
A G E +V W+++ DR+++ +
Sbjct: 808 SCTAHG--------------------EKPIIVRWEKE---------DRIINPEMAR---- 834
Query: 234 YGPLFLRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGLHERRVFHLTVAE 293
+L VG + +L+I P D G +SCH + Y +R + LTV E
Sbjct: 835 ----YLVSTKEVGEEVIS----TLQILPTVREDSGFFSCHAINSYG--EDRGIIQLTVQE 884
Query: 294 PHAEPP 299
P +PP
Sbjct: 885 P-PDPP 889
>gi|169208448 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 277
Score = 37.0 bits (84), Expect = 0.036
Identities = 44/165 (26%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 207 WDRQPPGVPHDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVAD 266
W RQPPG + + ++Y SG Y P L+ RV + D + FSL++ + AD
Sbjct: 63 WVRQPPG---KGLEWIGEIYHSGSPN-YNPS-LKSRVTISVDK-SKNQFSLKLSSVTAAD 116
Query: 267 EGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPPPR----GSPGNGSSHSGAPGPD---PT 319
Y C R EP +PP + G GA GP P
Sbjct: 117 RAVYYC----------ARDTVRGGECEPRHKPPCQEAEGADAGAAQDQQGARGPQSMRPG 166
Query: 320 LARGHNVINVIVPESRAHFFQQLGYVLATL-LLFILLLVTVLLAA 363
+G ++ + A L LLF++LL +L AA
Sbjct: 167 QEQGQGGRGFLICSVVSLLASTSAVPRAPLSLLFVVLLPHILTAA 211
>gi|62339432 platelet receptor Gi24 [Homo sapiens]
Length = 311
Score = 37.0 bits (84), Expect = 0.036
Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 20/158 (12%)
Query: 21 LLHSGSSVPAAAGSSVVSESAVSWEAGARAVLRCQSPRMVWTQDRLHDRQRVLHWDLRGP 80
L + S P AA S G L C R++ D+ HD W
Sbjct: 21 LFLAASLGPVAAFKVATPYSLYVCPEGQNVTLTC---RLLGPVDKGHDVTFYKTWYRSSR 77
Query: 81 GG-------GPARRL----LDLYSAGEQRVYEARDRGRLELSASAFDD-GNFSLLIRAVE 128
G P R L L L+ G Q + D + SA D GNFS+ +R +
Sbjct: 78 GEVQTCSERRPIRNLTFQDLHLHHGGHQAANTSHDLAQRHGLESASDHHGNFSITMRNLT 137
Query: 129 ETDAGLYTCNL----HHHYCHLYESLAVRLEVTDGPPA 162
D+GLY C + HHH H A+ L+V G A
Sbjct: 138 LLDSGLYCCLVVEIRHHHSEHRVHG-AMELQVQTGKDA 174
>gi|239756231 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 222
Score = 36.6 bits (83), Expect = 0.047
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 24/167 (14%)
Query: 207 WDRQPPGVPHDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVAD 266
W RQPPG + + ++Y SG Y P L+ RV + D + FSL++ + AD
Sbjct: 63 WVRQPPG---KGLEWIGEIYHSGSPN-YNPS-LKSRVTISVDK-SKNQFSLKLSSVTAAD 116
Query: 267 EGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPPPR----GSPGNGSSHSGAPGPD---PT 319
Y C R EP +PP + G GA GP P
Sbjct: 117 TAVYYC----------ARDTVRGGECEPRHKPPCQEAEGADAGAAQDQQGARGPQSMRPG 166
Query: 320 LARGHNVINVIVPESRAHFFQQLGYVLATL-LLFILLLVTVLLAARR 365
+G ++ + A L LLF++LL +L A ++
Sbjct: 167 QEQGQGGRGFLICSVVSLLASTSAVPRAPLSLLFVVLLPHILTAGKK 213
>gi|239750771 PREDICTED: similar to hCG1812074 [Homo sapiens]
Length = 222
Score = 36.6 bits (83), Expect = 0.047
Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 24/167 (14%)
Query: 207 WDRQPPGVPHDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVAD 266
W RQPPG + + ++Y SG Y P L+ RV + D + FSL++ + AD
Sbjct: 63 WVRQPPG---KGLEWIGEIYHSGSPN-YNPS-LKSRVTISVDK-SKNQFSLKLSSVTAAD 116
Query: 267 EGTYSCHLHHHYCGLHERRVFHLTVAEPHAEPPPR----GSPGNGSSHSGAPGPD---PT 319
Y C R EP +PP + G GA GP P
Sbjct: 117 TAVYYC----------ARDTVRGGECEPRHKPPCQEAEGADAGAAQDQQGARGPQSMRPG 166
Query: 320 LARGHNVINVIVPESRAHFFQQLGYVLATL-LLFILLLVTVLLAARR 365
+G ++ + A L LLF++LL +L A ++
Sbjct: 167 QEQGQGGRGFLICSVVSLLASTSAVPRAPLSLLFVVLLPHILTAGKK 213
>gi|56788397 myelin oligodendrocyte glycoprotein isoform beta4
precursor [Homo sapiens]
Length = 171
Score = 36.6 bits (83), Expect = 0.047
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVT 157
H ++ +++EV+
Sbjct: 132 HSYQEEAAMELKVEVS 147
Score = 30.8 bits (68), Expect = 2.6
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHA 296
+DEG ++C H E L V H+
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEVSHS 149
>gi|56788395 myelin oligodendrocyte glycoprotein isoform alpha4
precursor [Homo sapiens]
Length = 171
Score = 36.6 bits (83), Expect = 0.047
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 84 PARRLLDLYSAGEQRVYEARD--RGRLELSASAFDDGNFSLLIRAVEETDAGLYTCNLHH 141
P R++ LY G+ + + RGR EL A +G +L IR V +D G +TC
Sbjct: 72 PFSRVVHLYRNGKDQDGDQAPEYRGRTELLKDAIGEGKVTLRIRNVRFSDEGGFTCFFRD 131
Query: 142 HYCHLYESLAVRLEVT 157
H ++ +++EV+
Sbjct: 132 HSYQEEAAMELKVEVS 147
Score = 30.8 bits (68), Expect = 2.6
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 12/94 (12%)
Query: 205 VHWDRQPPGVPHDRADRLLDLYASGERRA--YGPLFLRDRVAVGADAFERGDFSLRIEPL 262
V W R P R++ LY +G+ + P + R R + DA G +LRI +
Sbjct: 66 VGWYRPP-------FSRVVHLYRNGKDQDGDQAPEY-RGRTELLKDAIGEGKVTLRIRNV 117
Query: 263 EVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHA 296
+DEG ++C H E L V H+
Sbjct: 118 RFSDEGGFTCFFRDH--SYQEEAAMELKVEVSHS 149
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 36.2 bits (82), Expect = 0.061
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 240 RDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHLHHHYCGLHERRVFHLTVAEPHAEP 298
R R + D +G +LRI + V+D+G Y+C G +E + HL VA ++P
Sbjct: 92 RGRATLVQDGIAKGRVALRIRGVRVSDDGEYTCFFRED--GSYEEALVHLKVAALGSDP 148
>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
Length = 319
Score = 36.2 bits (82), Expect = 0.061
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 146 LYESLAVRLEVTDGPPATPAYWDGEKEVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVV 205
L+ AVR+ V TP ++VL ++G L C H T + ++
Sbjct: 9 LWTLCAVRVTVDAISVETP------QDVLRASQGKSVTLPCTY--HTSTSSR----EGLI 56
Query: 206 HWDRQPPGVPHDRADRLLDLYASGERRAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVA 265
WD+ + +R++ S + +G L+ ++RV++ +A E+ D S+ I+ L +A
Sbjct: 57 QWDK----LLLTHTERVVIWPFSNKNYIHGELY-KNRVSISNNA-EQSDASITIDQLTMA 110
Query: 266 DEGTYSC 272
D GTY C
Sbjct: 111 DNGTYEC 117
>gi|11141887 brain link protein-1 [Homo sapiens]
Length = 340
Score = 36.2 bits (82), Expect = 0.061
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
Query: 172 EVLAVARGAPALLTCVNRGHVWTDRHVEEAQQVVHWDRQPPGVPHDRADRLLDLYASGER 231
EV+ RGA A L CV V W + PG + + L+ +
Sbjct: 43 EVIHSHRGATATLPCV--------LGTTPPSYKVRWSKVEPG---ELRETLILITNGLHA 91
Query: 232 RAYGPLFLRDRVAVGADAFERGDFSLRIEPLEVADEGTYSCHL 274
R YGPL R R+ G R D SL I + + DEG Y C L
Sbjct: 92 RGYGPLGGRARMRRG----HRLDASLVIAGVRLEDEGRYRCEL 130
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,858,897
Number of Sequences: 37866
Number of extensions: 1033428
Number of successful extensions: 5155
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 4537
Number of HSP's gapped (non-prelim): 724
length of query: 442
length of database: 18,247,518
effective HSP length: 105
effective length of query: 337
effective length of database: 14,271,588
effective search space: 4809525156
effective search space used: 4809525156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.