Guide to the Human Genome
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Name: N6AMT1 Sequence: fasta or formatted (186aa) NCBI GI: 87159831
Description:

N-6 adenine-specific DNA methyltransferase 1 isoform 2

Referenced in:

Additional Protein Modifications
Translation Factors

Other entries for this name:
alt prot [214aa] N-6 adenine-specific DNA methyltransferase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         22           4
 C cysteine            2.2          4           1
 D aspartate           3.2          6           1
 E glutamate           8.1         15           2
 F phenylalanine       4.8          9           2
 G glycine             9.7         18           2
 H histidine           2.2          4           1
 I isoleucine          4.8          9           1
 K lysine              4.8          9           1
 L leucine            10.8         20           3
 M methionine          2.7          5           1
 N asparagine          3.8          7           2
 P proline             4.8          9           1
 Q glutamine           2.7          5           1
 R arginine            2.7          5           1
 S serine              5.4         10           1
 T threonine           6.5         12           2
 V valine              7.0         13           2
 W tryptophan          0.5          1           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   N-6 adenine-specific DNA methyltransferase 1 isoform... 
N6AMT1                0.957   N-6 adenine-specific DNA methyltransferase 1 isoform...
HEMK1                 0.017   HemK methyltransferase family member 1 
PRMT2                 0.012   HMT1 hnRNP methyltransferase-like 1 
PRMT2                 0.012   HMT1 hnRNP methyltransferase-like 1 
COMT                  0.012   catechol-O-methyltransferase isoform S-COMT 
COMT                  0.012   catechol-O-methyltransferase isoform MB-COMT 
COMT                  0.012   catechol-O-methyltransferase isoform MB-COMT 
COMT                  0.012   catechol-O-methyltransferase isoform MB-COMT 
C5AR1                 0.009   complement component 5 receptor 1 
PCMT1                 0.009   protein-L-isoaspartate (D-aspartate) O-methyltransf...
TRMT61B               0.009   tRNA methyltransferase 61 homolog B 
MUC2                  0.006   mucin 2 precursor 
LOC100292252          0.006   PREDICTED: hypothetical protein 
LOC100294420          0.006   PREDICTED: similar to mucin 2 
LOC100290134          0.006   PREDICTED: hypothetical protein XP_002346595 
LOC100288551          0.006   PREDICTED: hypothetical protein XP_002342436 
RDH10                 0.006   retinol dehydrogenase 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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