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Search of human proteins with 8394376
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8394376 syntaxin 18 [Homo sapiens]
(335 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8394376 syntaxin 18 [Homo sapiens] 661 0.0
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 43 5e-04
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 41 0.001
gi|16418379 syntaxin 1B [Homo sapiens] 40 0.002
gi|148746195 trichohyalin [Homo sapiens] 40 0.002
gi|212276096 leucine rich repeat (in FLII) interacting protein 1... 39 0.005
gi|157168329 formin 1 [Homo sapiens] 39 0.007
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap... 39 0.007
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap... 39 0.007
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap... 39 0.007
gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo sap... 39 0.007
gi|40538794 coiled-coil domain containing 21 [Homo sapiens] 39 0.007
gi|62243374 MAD1-like 1 protein [Homo sapiens] 39 0.009
gi|62243369 MAD1-like 1 protein [Homo sapiens] 39 0.009
gi|62243332 MAD1-like 1 protein [Homo sapiens] 39 0.009
gi|94400932 syntaxin 5 [Homo sapiens] 39 0.009
gi|56550043 sarcolemma associated protein [Homo sapiens] 39 0.009
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 38 0.011
gi|170932494 syntaxin 7 [Homo sapiens] 38 0.011
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 38 0.011
gi|100814339 coiled-coil domain containing 146 [Homo sapiens] 38 0.011
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 38 0.015
gi|37577287 syntaxin 2 isoform 1 [Homo sapiens] 38 0.015
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa... 37 0.019
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa... 37 0.019
gi|52856430 protein expressed in prostate, ovary, testis, and pl... 37 0.025
gi|239745058 PREDICTED: hypothetical protein XP_002343353 [Homo ... 37 0.025
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 37 0.025
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 37 0.032
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 37 0.032
>gi|8394376 syntaxin 18 [Homo sapiens]
Length = 335
Score = 661 bits (1705), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MAVDITLLFRASVKTVKTRNKALGVAVGGGVDGSRDELFRRSPRPKGDFSSRAREVISHI 60
MAVDITLLFRASVKTVKTRNKALGVAVGGGVDGSRDELFRRSPRPKGDFSSRAREVISHI
Sbjct: 1 MAVDITLLFRASVKTVKTRNKALGVAVGGGVDGSRDELFRRSPRPKGDFSSRAREVISHI 60
Query: 61 GKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHK 120
GKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHK
Sbjct: 61 GKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHK 120
Query: 121 EIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRES 180
EIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRES
Sbjct: 121 EIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRES 180
Query: 181 TSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ 240
TSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ
Sbjct: 181 TSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ 240
Query: 241 RLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE 300
RLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE
Sbjct: 241 RLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE 300
Query: 301 DIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 335
DIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
Sbjct: 301 DIREAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS 335
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 42.7 bits (99), Expect = 5e-04
Identities = 48/244 (19%), Positives = 107/244 (43%), Gaps = 37/244 (15%)
Query: 63 LRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEI 122
L+D L++ +D + ++ + + ER ++ ++ + ++++R ++ KEI
Sbjct: 424 LKDQLVKRLEDLVKKHTVEIKSVRSSVEAERKKLQREVEA-------QLEEVRKKSEKEI 476
Query: 123 HSQQVKEHRTAVLDFIEDYLKRVCKL--YSEQRAIRVKRVVDKKRLSKLEPEPNTKTRES 180
+Q++E + A+ +++ L V +L + +Q +K R + E P R+
Sbjct: 477 --KQLEEEKAALNVKLQNSLLEVLRLEEFIQQ---------NKTRPTGAEESPQELGRQH 525
Query: 181 TSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ 240
S + K E +P EE +K+ AE +G DE E ++ +E
Sbjct: 526 CSILETQDPCLKLDETSPRGEEYQDKLAAE---------EGTSSDE--EERTKVLLKEGS 574
Query: 241 RLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNE 300
+ SL E + +I RL+E + + + +A++ + Q + T N +E +
Sbjct: 575 DPQPPLGSLLKE------KTSKIQRLEEDWQSQKAKLQAQVSQMQQALEQCTSNYREDLQ 628
Query: 301 DIRE 304
+++
Sbjct: 629 ALKQ 632
Score = 29.3 bits (64), Expect = 5.2
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 12/169 (7%)
Query: 113 QLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPE 172
+L +A +E Q+++E R + L+ + + SEQ+A +K L L+ E
Sbjct: 701 RLELQALEEKARQELQEERERMQAQQALLLESLRQELSEQQAACSGH---QKDLEALQAE 757
Query: 173 PNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEI 232
R+ SS Q P + ATEER A + P G G G GE EE
Sbjct: 758 LRALGRQQASS----QCPGDSKDHIIATEERGGPGQAGSPP--GAAGQGSGEGCGLWEEN 811
Query: 233 QMFEQENQRLIGEMNSLFDEVRQIEGR---VVEISRLQEIFTEKVLQQE 278
+ +RL E+ E +++ + + E + Q + L+QE
Sbjct: 812 AQLQDAVRRLRAEVEQHQQEAQKLRDQRRFLEETQQAQRAREVETLRQE 860
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 27/197 (13%)
Query: 117 EAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSK-LEPEPNT 175
+AHKE+ + +Y+K + L +E A+R K DK L K LE NT
Sbjct: 115 DAHKELEQSHI------------NYVKEIENLKNELMAVRSKYSEDKANLQKQLEEAMNT 162
Query: 176 KTR-------ESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELS 228
+ ++ S + V + + + P EE+ + Q +L D K E
Sbjct: 163 QLELSEQLKFQNNSEDNVKKLQEEIEKIRPGFEEQ----ILYLQKQLDATTDEKKETVTQ 218
Query: 229 PEEIQMFEQENQRLIGEMNSLFDEVRQIEG-RVVEISRLQEIFTEKVLQQEAEIDSIHQL 287
+ I E +Q +NSL +E+ Q++ E+ L + EAEI+ +++L
Sbjct: 219 LQNI--IEANSQHYQKNINSLQEELLQLKAIHQEEVKELMCQIEASAKEHEAEINKLNEL 276
Query: 288 VVGATENIKEGNEDIRE 304
+ + ++I++
Sbjct: 277 KENLVKQCEASEKNIQK 293
Score = 35.4 bits (80), Expect = 0.072
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 99 DAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVK 158
+ QI ++A+ EA K Q++KEH T V +E ++V+
Sbjct: 1086 EVQILEVQRAKAMVDKELEAEKLQKEQKIKEHATTV---------------NELEELQVQ 1130
Query: 159 RVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTW 218
+KK+L K E +++ + ++ + E+++ E +L T
Sbjct: 1131 LQKEKKQLQKTMQELELVKKDAQQTTLMNMEIAD-----------YERLMKELNQKL-TN 1178
Query: 219 GDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQE 278
+ K ED +EI++ +Q+ + L E+ SL V+Q E + +I +L + T+K L
Sbjct: 1179 KNNKIED--LEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKIKQLL-VKTKKELADS 1235
Query: 279 AEIDSIHQLVVGATENIKEGNEDIREAIK 307
+ ++ H ++ + + E ++ E K
Sbjct: 1236 KQAETDHLILQASLKGELEASQQQVEVYK 1264
Score = 31.2 bits (69), Expect = 1.4
Identities = 40/214 (18%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 120 KEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIR--VKRVVDKKRLSKLEPEPNTKT 177
KE H +++ E F+ D K L E + ++ + + +K+ + L E +
Sbjct: 430 KEQHQKEISELNET---FLSDSEKEKLTLMFEIQGLKEQCENLQQEKQEAILNYESLREI 486
Query: 178 RESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGK--------------- 222
E +E + +S K S+E + +++ + E Q +L T K
Sbjct: 487 MEILQTE-LGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNRLQGENE 545
Query: 223 ---GEDELSPE---EIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQ 276
+ EL PE I+ +++N + ++ ++++EG++ ++ ++ F K+
Sbjct: 546 KLLSQQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLTEEKDDFINKLKN 605
Query: 277 QEAEIDSIHQLVVGATENIKEGNEDIREAIKNNA 310
E+D+ H+ I E + + + I+ N+
Sbjct: 606 SHEEMDNFHKKCEREERLILELGKKVEQTIQYNS 639
>gi|16418379 syntaxin 1B [Homo sapiens]
Length = 288
Score = 40.4 bits (93), Expect = 0.002
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 37/265 (13%)
Query: 89 TDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHS-QQVKEHRTAVL------------ 135
+D E + + D FM E ++++R K +QVK+ +A+L
Sbjct: 14 SDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAILAAPNPDEKTKQE 73
Query: 136 --DFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNT-KTRESTSSEKVSQSPSK 192
D D K K+ S+ +AI + + ++ L++ + KT+ ST S K + +
Sbjct: 74 LEDLTADIKKTANKVRSKLKAIE-QSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMT- 131
Query: 193 DSEENPATEERPEKILAETQPELGTWGDGKGEDELSP-----------EEIQMFEQENQR 241
E N + ++ Q +L G +EL ++I+M Q ++
Sbjct: 132 --EYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIKMDSQMTKQ 189
Query: 242 LIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAE---IDSIHQLVVGATENIKEG 298
+ E+ + +E+ ++E I L ++F + + E++ ID I V + + ++
Sbjct: 190 ALNEIETRHNEIIKLE---TSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERA 246
Query: 299 NEDIREAIKNNAGFRVWILFFLVMC 323
D ++A+K + R + ++ C
Sbjct: 247 VSDTKKAVKYQSKARRKKIMIIICC 271
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 24/204 (11%)
Query: 93 RDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLD----FIEDYLKRVCKL 148
++Q+ ++ Q+ E ++ R + ++ +Q +E + E+ KR +
Sbjct: 896 QEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKR--RR 953
Query: 149 YSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKIL 208
+R R + + +K L EP + R+ + + + EE EER ++
Sbjct: 954 QERERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRR 1013
Query: 209 AETQPELGTWGDGKGEDELSPEEIQMFE--------QENQRLIGEMNSLFDEVRQIEGRV 260
E + + + +DEL EE Q+ QE +R E L E Q+ G
Sbjct: 1014 QEWERQY------RKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEE 1067
Query: 261 VEISRLQEI----FTEKVLQQEAE 280
E R QE+ E+ LQQE E
Sbjct: 1068 RETRRRQELERQYRKEEELQQEEE 1091
Score = 38.1 bits (87), Expect = 0.011
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 112 QQLRTEAHKEIHSQQVKEHR-----TAVLDFIEDYLKR---VCKLYSEQRAIRVKRVVDK 163
QQLR E +E H Q+ ++ R + D+LKR + E+R ++KR ++
Sbjct: 423 QQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLKRDQEE 482
Query: 164 KRLS---KLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKI--LAETQPELGTW 218
+R KLE E + +E +++ + + E+ +E E++ ++ +L
Sbjct: 483 ERRERWLKLEEEERREQQE-RREQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRRE 541
Query: 219 GDGKGEDELSPEEIQMFEQE--NQRLIGEMNSLFDEV--RQIEGRVVEISRLQEIFTEKV 274
+ + E L EE + EQE QRL E D++ R+ E R + R QE E+
Sbjct: 542 QEERREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQR 601
Query: 275 LQQEAEIDSIHQ 286
L++E E++ + Q
Sbjct: 602 LKRE-EVERLEQ 612
Score = 34.3 bits (77), Expect = 0.16
Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 90 DTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKE-HRTAVLDFIEDYLKRVCKL 148
+ ++ + ++ ++F + ++ T KE Q +E R L E+ L+++
Sbjct: 225 EKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKL--- 281
Query: 149 YSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKIL 208
E++ +R +R ++++ +L E + ++ + + + E EER E+ L
Sbjct: 282 --ERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQL 339
Query: 209 AETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQE 268
Q E + ++E E+ EQE +R ++ Q R ++ R Q+
Sbjct: 340 RREQEERREQQLRREQEEERREQQLRREQEEERREQQLRR-----EQQLRREQQLRREQQ 394
Query: 269 IFTEKVLQQEAEIDSIHQL 287
+ E+ L++E ++ QL
Sbjct: 395 LRREQQLRREQQLRREQQL 413
Score = 29.3 bits (64), Expect = 5.2
Identities = 42/207 (20%), Positives = 79/207 (38%), Gaps = 22/207 (10%)
Query: 35 RDELFRRSPRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERD 94
R++L +R + + R + + + RD LL+ ++ R +R+
Sbjct: 546 REQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEER------------RQQRLKRE 593
Query: 95 QIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRA 154
Q ++ Q R E ++Q + + +E R +L E +R +L EQ+
Sbjct: 594 QEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQE 653
Query: 155 IRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPE 214
R ++RL + E E + R E+ + EE ER + + + Q +
Sbjct: 654 RR------EQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIKSRIPKWQWQ 707
Query: 215 LGTWGDGKGEDELSPEEIQMFEQENQR 241
L + D + S +QE QR
Sbjct: 708 LESEADARQSKVYSRPR----KQEGQR 730
Score = 29.3 bits (64), Expect = 5.2
Identities = 34/180 (18%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 92 ERDQIDQDAQIFMRTCSEA--IQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLY 149
++D++ Q+ + +R E +Q+ + +E QQ +E E +R +L
Sbjct: 1022 KKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGE----ERETRRRQEL- 1076
Query: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILA 209
+R R + + ++ L EP + R+ + + + EE EER ++
Sbjct: 1077 --ERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQ 1134
Query: 210 ETQPELGTWGDGKGEDELSPEEIQMFEQE-NQRLIGEMNSLFDEVRQIEGRVVEISRLQE 268
E + + + E+E+ EE Q+ +E +R E+ + E +++ ++ R ++
Sbjct: 1135 ELERQY------REEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQ 1188
>gi|212276096 leucine rich repeat (in FLII) interacting protein 1
isoform 3 [Homo sapiens]
Length = 808
Score = 39.3 bits (90), Expect = 0.005
Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEK--- 206
+E R IR+K + ++++ + + ++R +TS+ + S S + EERPEK
Sbjct: 35 AEAREIRMKEL-ERQQKEEDSERYSRRSRRNTSASDEDERMSVGSRGSLRVEERPEKDFT 93
Query: 207 ---------ILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIE 257
+ A T LG +G + S I + + + R I E+N L D+++ +E
Sbjct: 94 EKGSRNMPGLSAATLASLGGTSSRRGSGDTS---ISIDTEASIREIKELNELKDQIQDVE 150
Query: 258 GRVVE--------ISRLQEIFTEKVLQQEAEIDS 283
G+ ++ ++ ++E + +K + A++D+
Sbjct: 151 GKYMQGLKEMKDSLAEVEEKY-KKAMVSNAQLDN 183
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 38.9 bits (89), Expect = 0.007
Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 25/151 (16%)
Query: 170 EPEPNTKTRESTSSEKVSQSPSKDSEENPA----------------TEERPEKILAETQP 213
EPE + T S V PS++S+ENP E P++I E
Sbjct: 156 EPEEGSSTNGPKSPSGVLSEPSQESKENPGGFRENTVTGEMNGAELCAEDPQRIPPEMSS 215
Query: 214 ELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEK 273
+L G+G + E P + Q+ E+ +Q L N G S +E+ EK
Sbjct: 216 KLEA-GNGGLQTERRPSQDQVGEEGSQDLPAVTNQ-----NSSVGITESASSKKEVSGEK 269
Query: 274 VLQQEAEIDSIHQLVVGATENIKEGNEDIRE 304
Q A + L GAT EG E I E
Sbjct: 270 SFQLPAFFSGLRVLKKGAT---AEGGETITE 297
>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
sapiens]
Length = 436
Score = 38.9 bits (89), Expect = 0.007
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 56 VISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLR 115
VI H+ R+ L+ K + E +T + + + A+ ++T EA Q +
Sbjct: 105 VIQHLLSEREEALKQHKTLSQELVNLRGEL--VTASTTCEKLEKARNELQTVYEAFVQ-Q 161
Query: 116 TEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNT 175
+A K ++KE T + + D + Y Q + + SKLE E +
Sbjct: 162 HQAEKTERENRLKEFYTREYEKLRDTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASH 221
Query: 176 KTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTW-GDGKGEDELSPEEIQM 234
+ + S S+ + + ++ E +L+E Q L D K E++ E+++
Sbjct: 222 SEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLSEKQESLEKQINDLKSENDALNEKLKS 281
Query: 235 FEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLV------ 288
E++ +R + N ++ +E + + + EI EK+ QQ+ ++ + +LV
Sbjct: 282 -EEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTAL 340
Query: 289 VGATENIKEGNEDIR 303
V + ++ NE+++
Sbjct: 341 VDKLKRFQQENEELK 355
>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
Length = 1270
Score = 38.9 bits (89), Expect = 0.007
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 56 VISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLR 115
VI H+ R+ L+ K + E +T + + + A+ ++T EA Q +
Sbjct: 939 VIQHLLSEREEALKQHKTLSQELVNLRGEL--VTASTTCEKLEKARNELQTVYEAFVQ-Q 995
Query: 116 TEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNT 175
+A K ++KE T + + D + Y Q + + SKLE E +
Sbjct: 996 HQAEKTERENRLKEFYTREYEKLRDTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASH 1055
Query: 176 KTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTW-GDGKGEDELSPEEIQM 234
+ + S S+ + + ++ E +L+E Q L D K E++ E+++
Sbjct: 1056 SEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLSEKQESLEKQINDLKSENDALNEKLKS 1115
Query: 235 FEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLV------ 288
E++ +R + N ++ +E + + + EI EK+ QQ+ ++ + +LV
Sbjct: 1116 -EEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTAL 1174
Query: 289 VGATENIKEGNEDIR 303
V + ++ NE+++
Sbjct: 1175 VDKLKRFQQENEELK 1189
>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sapiens]
Length = 1216
Score = 38.9 bits (89), Expect = 0.007
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 56 VISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLR 115
VI H+ R+ L+ K + E +T + + + A+ ++T EA Q +
Sbjct: 885 VIQHLLSEREEALKQHKTLSQELVNLRGEL--VTASTTCEKLEKARNELQTVYEAFVQ-Q 941
Query: 116 TEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNT 175
+A K ++KE T + + D + Y Q + + SKLE E +
Sbjct: 942 HQAEKTERENRLKEFYTREYEKLRDTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASH 1001
Query: 176 KTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTW-GDGKGEDELSPEEIQM 234
+ + S S+ + + ++ E +L+E Q L D K E++ E+++
Sbjct: 1002 SEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLSEKQESLEKQINDLKSENDALNEKLKS 1061
Query: 235 FEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLV------ 288
E++ +R + N ++ +E + + + EI EK+ QQ+ ++ + +LV
Sbjct: 1062 -EEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTAL 1120
Query: 289 VGATENIKEGNEDIR 303
V + ++ NE+++
Sbjct: 1121 VDKLKRFQQENEELK 1135
>gi|50348626 mitochondrial tumor suppressor 1 isoform 4 [Homo
sapiens]
Length = 517
Score = 38.9 bits (89), Expect = 0.007
Identities = 52/255 (20%), Positives = 109/255 (42%), Gaps = 11/255 (4%)
Query: 56 VISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLR 115
VI H+ R+ L+ K + E +T + + + A+ ++T EA Q +
Sbjct: 186 VIQHLLSEREEALKQHKTLSQELVNLRGEL--VTASTTCEKLEKARNELQTVYEAFVQ-Q 242
Query: 116 TEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNT 175
+A K ++KE T + + D + Y Q + + SKLE E +
Sbjct: 243 HQAEKTERENRLKEFYTREYEKLRDTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASH 302
Query: 176 KTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTW-GDGKGEDELSPEEIQM 234
+ + S S+ + + ++ E +L+E Q L D K E++ E+++
Sbjct: 303 SEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLSEKQESLEKQINDLKSENDALNEKLKS 362
Query: 235 FEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLV------ 288
E++ +R + N ++ +E + + + EI EK+ QQ+ ++ + +LV
Sbjct: 363 -EEQKRRAREKANLKNPQIMYLEQELESLKAVLEIKNEKLHQQDIKLMKMEKLVDNNTAL 421
Query: 289 VGATENIKEGNEDIR 303
V + ++ NE+++
Sbjct: 422 VDKLKRFQQENEELK 436
>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
Length = 762
Score = 38.9 bits (89), Expect = 0.007
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 83 SEYGRMTDT-ERDQIDQDAQIFMRTCSEAIQQLRTEAHK---EIHSQQVK--EHRTAVLD 136
+++ + T+ R++ID + ++ + SE QL E+ K + HS++VK E R D
Sbjct: 396 AQFAQKTEALSREKIDLEKKL---SASEVEVQLIRESLKVALQKHSEEVKKQEERVKGRD 452
Query: 137 FIEDYLKRVCKLYSEQRAIRVKRVVDKKR----LSKLEPEPNTKTRESTSSEKVSQSPSK 192
+ LK+ C+ SEQ + +R+ +R L LE + S K ++ K
Sbjct: 453 KHINNLKKKCQKESEQNREKQQRIETLERYLADLPTLEDHQKQSQQLKDSELKSTELQEK 512
Query: 193 DSEENPATEE-----RPEKI----LAETQPELGTWG----DGKGEDELSPE--EIQMFEQ 237
+E EE R ++I L + + E + G D + +E S E E++M
Sbjct: 513 VTELESLLEETQAICREKEIQLESLRQREAEFSSAGHSLQDKQSVEETSGEGPEVEMESW 572
Query: 238 EN-----QRLIGEMNSLFDEVR-QIEGRVVEISRLQEIFTEKVLQQEAE-IDSIHQLVVG 290
+ Q+++ + D++R Q++ E++ QE T + L++EA+ DS Q +
Sbjct: 573 QKRYDSLQKIVEKQQQKMDQLRSQVQSLEQEVA--QEEGTSQALREEAQRRDSALQQLRT 630
Query: 291 ATENIKEGNEDIRE 304
A + + N+D+ E
Sbjct: 631 AVKELSVQNQDLIE 644
>gi|62243374 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 38.5 bits (88), Expect = 0.009
Identities = 41/226 (18%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 90 DTERDQIDQDAQIFMRTCSEAIQQLRT-EAHKEI---HSQQVKEHRTAVLDFIEDYLKRV 145
++E+ ++ + + + C EA Q+++ +A +E H QQ+K+ L++
Sbjct: 184 ESEKQELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKD------------LEQK 231
Query: 146 CKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPE 205
L + AI + RL +LE E ES ++ ++ EE + +
Sbjct: 232 LSLQEQDAAIVKNMKSELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRK-- 289
Query: 206 KILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISR 265
G E E + E EN+RL+ ++ S ++ + Q G +
Sbjct: 290 ----------------LGRQEKMQETLVGLELENERLLAKLQS-WERLDQTMGLSIRTPE 332
Query: 266 LQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAG 311
F ++ Q+E + + V + +++ + ++E ++ +G
Sbjct: 333 DLSRFVVELQQRELALKDKNSAVTSSARGLEKARQQLQEELRQVSG 378
>gi|62243369 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 38.5 bits (88), Expect = 0.009
Identities = 41/226 (18%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 90 DTERDQIDQDAQIFMRTCSEAIQQLRT-EAHKEI---HSQQVKEHRTAVLDFIEDYLKRV 145
++E+ ++ + + + C EA Q+++ +A +E H QQ+K+ L++
Sbjct: 184 ESEKQELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKD------------LEQK 231
Query: 146 CKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPE 205
L + AI + RL +LE E ES ++ ++ EE + +
Sbjct: 232 LSLQEQDAAIVKNMKSELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRK-- 289
Query: 206 KILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISR 265
G E E + E EN+RL+ ++ S ++ + Q G +
Sbjct: 290 ----------------LGRQEKMQETLVGLELENERLLAKLQS-WERLDQTMGLSIRTPE 332
Query: 266 LQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAG 311
F ++ Q+E + + V + +++ + ++E ++ +G
Sbjct: 333 DLSRFVVELQQRELALKDKNSAVTSSARGLEKARQQLQEELRQVSG 378
>gi|62243332 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 38.5 bits (88), Expect = 0.009
Identities = 41/226 (18%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 90 DTERDQIDQDAQIFMRTCSEAIQQLRT-EAHKEI---HSQQVKEHRTAVLDFIEDYLKRV 145
++E+ ++ + + + C EA Q+++ +A +E H QQ+K+ L++
Sbjct: 184 ESEKQELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKD------------LEQK 231
Query: 146 CKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPE 205
L + AI + RL +LE E ES ++ ++ EE + +
Sbjct: 232 LSLQEQDAAIVKNMKSELVRLPRLERELKQLREESAHLREMRETNGLLQEELEGLQRK-- 289
Query: 206 KILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISR 265
G E E + E EN+RL+ ++ S ++ + Q G +
Sbjct: 290 ----------------LGRQEKMQETLVGLELENERLLAKLQS-WERLDQTMGLSIRTPE 332
Query: 266 LQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAG 311
F ++ Q+E + + V + +++ + ++E ++ +G
Sbjct: 333 DLSRFVVELQQRELALKDKNSAVTSSARGLEKARQQLQEELRQVSG 378
>gi|94400932 syntaxin 5 [Homo sapiens]
Length = 355
Score = 38.5 bits (88), Expect = 0.009
Identities = 23/108 (21%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 225 DELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSI 284
D + +++Q+ ++++ + S D ++ IE +VE+ + + V +QE I I
Sbjct: 249 DSRTSQQLQLIDEQDSYI----QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRI 304
Query: 285 HQLVVGATENIKEGNEDIREAIKNNAGFRVWIL--FFLVMCSFSLLFL 330
+ V+GA +++ + +I + ++ R W++ FL++ F ++F+
Sbjct: 305 DENVLGAQLDVEAAHSEILKYFQSVTSNR-WLMVKIFLILIVFFIIFV 351
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 38.5 bits (88), Expect = 0.009
Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 108 SEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRL- 166
S+ + QL + +H +Q+ E + A L +R+ + E + ++D+ RL
Sbjct: 162 SQELFQLSQYLQEALHREQMLEQKLATL-------QRLLAITQEASDTSWQALIDEDRLL 214
Query: 167 SKLEPEPN-------TKTRESTSSEKVSQSPSKDSEENPATEER----PEKI-----LAE 210
S+LE N +T +S E ++ K + E A E EKI L+E
Sbjct: 215 SRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSE 274
Query: 211 TQPELGTWGDG----KGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRL 266
+ L D K +E + EE++ + + E+ L D+++ EG+ EI +
Sbjct: 275 VERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQK 334
Query: 267 QEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAI 306
+ +++ + E++ Q + E ++ N+ E +
Sbjct: 335 GQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERL 374
Score = 36.2 bits (82), Expect = 0.042
Identities = 43/216 (19%), Positives = 87/216 (40%), Gaps = 22/216 (10%)
Query: 98 QDAQIFMRTCSEAIQQLRTEAHKEIHSQQV-KEHRTAVLDFIEDYLKRVCKLYSEQRAIR 156
Q+ Q + EA + RT K Q + +E R A + +E+ K++ L ++ + +
Sbjct: 480 QEIQHLRKELIEAQELARTSKQKCFELQALLEEERKAYRNQVEESTKQIQVLQAQLQRLH 539
Query: 157 VKRVVDKKRLSKLEPEPNTKTRESTSSEK-----VSQSPSKDSEENPATEERPEKILAET 211
+ D + L + + T TR+ S + + Q+ +K + E ++ L +
Sbjct: 540 I----DTENLREEKDSEITSTRDELLSARDEILLLHQAAAKVASERDTDIASLQEELKKV 595
Query: 212 QPELGTWGDGKGEDELSPEEIQ------------MFEQENQRLIGEMNSLFDEVRQIEGR 259
+ EL W E E +Q +E RL GE+ L E +E
Sbjct: 596 RAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEATRLQGELEKLRKEWNALETE 655
Query: 260 VVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENI 295
+ R + + ++ +QE E+ + + + T ++
Sbjct: 656 CHSLKRENVLLSSELQRQEKELHNSQKQSLELTSDL 691
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 38.1 bits (87), Expect = 0.011
Identities = 51/242 (21%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 70 HRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRT--CSEAIQQLRTEAHKEIHSQQV 127
H ++ I E ++ + E+ Q +Q+A+++ + E +++R E K++ Q+
Sbjct: 401 HEQEKIREQEEKRQEEEKIREQEKRQ-EQEAKMWRQEEKIREQEEKIR-EQEKKMWRQEE 458
Query: 128 KEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTREST---SSE 184
K H + E+ + +++ ++ I + + +++ E E + +E E
Sbjct: 459 KIHEQEKIRE-EEKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQEEKIRKQEEKVWRQEE 517
Query: 185 KVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ--RL 242
K+ + K E+ + EKI Q E+ + E E EE + EQE++ R
Sbjct: 518 KIREQEEKIREQEEKMWRQEEKI--REQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQ 575
Query: 243 IGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDI 302
++ ++V + E ++ E ++ EK+ +QE +I + + E I+E E I
Sbjct: 576 EEKIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKI 635
Query: 303 RE 304
RE
Sbjct: 636 RE 637
Score = 35.4 bits (80), Expect = 0.072
Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 21/214 (9%)
Query: 112 QQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDK-KRLSKLE 170
+ LR E ++H+ ++ + L Y + K + + R+ D K +LE
Sbjct: 119 EALRRELEAQVHTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHDSWKFAGELE 178
Query: 171 PEPNTKTRESTSSEKVSQSPSKDSE-------ENPATEERPEKILAETQPELGTWGDGKG 223
+ + +++ + +K+ + N T+E ++ A+ Q +L K
Sbjct: 179 QALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKS 238
Query: 224 EDELSPEEIQMFEQE------NQRLIGEMNSLFDEVRQIEGRV---VEIS----RLQEIF 270
E +L+ +E++ + Q+L E + L E++ + ++ VE + RL +
Sbjct: 239 EIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQ 298
Query: 271 TEKVLQQEAEIDSIHQLVVGATENIKEGNEDIRE 304
EK+ +QE +I + + E I+E E IRE
Sbjct: 299 EEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIRE 332
Score = 34.3 bits (77), Expect = 0.16
Identities = 36/182 (19%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 139 EDYLKRVCKLYSEQRAIRVK--RVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEE 196
E+ ++ + + EQ IR + + +++++ + E + + EK+ + K E+
Sbjct: 390 EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQ 449
Query: 197 NPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQI 256
+ EKI + + E+E E+ +M+ QE + I E ++ + ++
Sbjct: 450 EKKMWRQEEKIHEQEKIR---------EEEKRQEQEEMWRQEEK--IHEQEEIWRQKEKM 498
Query: 257 EGRVVEISRLQEIF---TEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFR 313
+ +I + +E EK+ +QE +I + + E I+E E RE K + +
Sbjct: 499 HEQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEK 558
Query: 314 VW 315
+W
Sbjct: 559 IW 560
Score = 30.8 bits (68), Expect = 1.8
Identities = 37/190 (19%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 117 EAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVV--DKKRLSKLEPEPN 174
E ++I Q+ K R E+ ++ +++ E+ + + + ++KR + +
Sbjct: 521 EQEEKIREQEEKMWRQ------EEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWR 574
Query: 175 TKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQM 234
+ + EKV + K E+ +E+ EK+ W K E+++ +E ++
Sbjct: 575 QEEKIREQEEKVWRQEEKIREQEEKRQEQEEKM----------W---KQEEKIREQEEKI 621
Query: 235 FEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATEN 294
EQE + + +++R+ E E EK+ +QE ++ + + E
Sbjct: 622 QEQEEK-----IREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQEEK 676
Query: 295 IKEGNEDIRE 304
I+E + IRE
Sbjct: 677 IREQEKKIRE 686
>gi|170932494 syntaxin 7 [Homo sapiens]
Length = 261
Score = 38.1 bits (87), Expect = 0.011
Identities = 58/277 (20%), Positives = 113/277 (40%), Gaps = 66/277 (23%)
Query: 42 SPRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTE--RDQIDQD 99
+P GD + A+ + S+I K+ +E ++ T+++ G D+ R Q+ Q
Sbjct: 4 TPGVGGDPAQLAQRISSNIQKITQCSVEIQR--------TLNQLGTPQDSPELRQQLQQK 55
Query: 100 AQIFMRTCSEAIQQLRT----------EAHKEIHSQQ-VKEHRTAVLDFIEDYLKRVCKL 148
Q + E + ++ + ++I + V E T++ +F ++V +
Sbjct: 56 QQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNF-----QKVQRQ 110
Query: 149 YSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKIL 208
+E+ V RV R+S PE ++K R S E
Sbjct: 111 AAEREKEFVARVRASSRVSGSFPEDSSKERNLVSWE------------------------ 146
Query: 209 AETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQE 268
++TQP++ + ED+L RLI E S +RQ+E +++I+ + +
Sbjct: 147 SQTQPQVQVQDEEITEDDL-------------RLIHERES---SIRQLEADIMDINEIFK 190
Query: 269 IFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREA 305
+ +Q IDSI V A ++++ N+ + A
Sbjct: 191 DLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRA 227
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 38.1 bits (87), Expect = 0.011
Identities = 58/271 (21%), Positives = 116/271 (42%), Gaps = 19/271 (7%)
Query: 37 ELFRRSPRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQI 96
EL + R K + SSR R++ L++ E + N ++ ++ DT++ ++
Sbjct: 1322 ELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKK-KV 1380
Query: 97 DQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIR 156
D D + + EA ++L +A E SQ+++E + D +E R+ +Q
Sbjct: 1381 DDDLGT-IESLEEAKKKLLKDA--EALSQRLEE-KALAYDKLEKTKNRL-----QQELDD 1431
Query: 157 VKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELG 216
+ +D +R E K + +E+ S S E + A E EK E
Sbjct: 1432 LTVDLDHQRQVASNLEKKQKKFDQLLAEEKSISARYAEERDRAEAEAREK-------ETK 1484
Query: 217 TWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQ 276
+ +E + E + FE++N++L +M L + V E+ + + ++V +
Sbjct: 1485 ALSLARALEE-ALEAKEEFERQNKQLRADMEDLMSSKDDVGKNVHELEKSKRALEQQVEE 1543
Query: 277 QEAEIDSIHQLVVGATENIKEGNEDIREAIK 307
+++ + + ATE+ K E +A+K
Sbjct: 1544 MRTQLEELED-ELQATEDAKLRLEVNMQAMK 1573
>gi|100814339 coiled-coil domain containing 146 [Homo sapiens]
Length = 955
Score = 38.1 bits (87), Expect = 0.011
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 89 TDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKL 148
T Q+ Q+A+ F +E IQQ ++ H QQ A + +++ K
Sbjct: 81 TQESEVQLLQNAKRF----TEQIQQ------QQFHLQQADNFPEAFSTEVSKMREQLLKY 130
Query: 149 YSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKIL 208
+E A++ + ++ RL+ L+ E +E K + K +TEE ++I+
Sbjct: 131 QNEYNAVKEREFHNQYRLNSLKEEKIIIVKEFEKITKPGEMEKKMKILRESTEELRKEIM 190
Query: 209 AETQPELGTWGDGKGEDELSPEEIQMFEQ-ENQRLIGEMNSLFDEVRQIEGRVVEISRLQ 267
Q +L ED S ++ + EQ E + L+G L DEV + V+I +
Sbjct: 191 ---QKKLEI--KNLREDLASKQKQLLKEQKELEELLGHQVVLKDEVAHHQTIPVQIGKEI 245
Query: 268 EIFTEKVLQQEAEIDSIHQLVVGATENIKE 297
E T K ++ E + + Q V +++K+
Sbjct: 246 EKITRKKVEMEKKKIVLEQEVKTLNDSLKK 275
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 37.7 bits (86), Expect = 0.015
Identities = 52/286 (18%), Positives = 122/286 (42%), Gaps = 23/286 (8%)
Query: 36 DELFRRSPRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQ 95
+EL+ R + + + R E I R+ ++ +++ I M M + ++
Sbjct: 276 NELWNRLNQQQEEKMWRQEEKIQE----REEKIQEQEEKIREQEEKMRRQEEMMWEKEEK 331
Query: 96 IDQDAQIFMRTCSEAIQQLRTEAHKE--IHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQR 153
+ + ++ E I++L + H++ I Q+ K + E ++ K++ ++
Sbjct: 332 MRRQEEMMWEK-EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEE 390
Query: 154 AIRVK--RVVDKKRLSKLEPEPNTKTREST---------SSEKVSQSPSKDSEENPATEE 202
IR + ++ +++ + + + E + E EK+ + K E+ E
Sbjct: 391 KIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIRE 450
Query: 203 RPEKILAETQPELGTWGDGKGEDE--LSPEEIQMFEQENQ--RLIGEMNSLFDEVRQIEG 258
+ EKI E + + + GE E + +E +M EQE + R ++ ++R+ E
Sbjct: 451 QEEKI-REQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEE 509
Query: 259 RVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIRE 304
++ E + + EK+ +QE ++ + + E ++ E +RE
Sbjct: 510 KIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMRE 555
Score = 35.8 bits (81), Expect = 0.055
Identities = 34/173 (19%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 139 EDYLKRVCKLYSEQRAIRVK--RVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEE 196
E+ ++ + + EQ IR + + +++++ + E + + EK+ + K E+
Sbjct: 343 EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQ 402
Query: 197 NPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ--RLIGEMNSLFDEVR 254
+E+ EK+ G+ E+++ +E +M EQE + R ++ ++R
Sbjct: 403 EEMMQEQEEKM-------------GEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIR 449
Query: 255 QIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIK 307
+ E ++ E + + EK+ +QE ++ + E ++ E IRE K
Sbjct: 450 EQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEK 502
Score = 30.0 bits (66), Expect = 3.0
Identities = 38/207 (18%), Positives = 84/207 (40%), Gaps = 14/207 (6%)
Query: 112 QQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDK-KRLSKLE 170
+ LR E ++ + ++ + L Y + K + + R+ D K +LE
Sbjct: 107 EALRRELEAQVQTIRILTCQKTELQMALYYSQHAVKQLEGEARDLISRLHDSWKFAGELE 166
Query: 171 PEPNTKTRESTSSEKVSQSPSKDSE-------ENPATEERPEKILAETQPELGTWGDGKG 223
+ + +++ + +K+ + N T+E ++ A+ Q +L K
Sbjct: 167 QALSAVATQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKLQEKLQLVESEKS 226
Query: 224 EDELSPEEIQMFEQE------NQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQ 277
E +L+ +E++ + Q+L E + L E++ + ++ E++ QQ
Sbjct: 227 EIQLNVKELKRKLERAKLLLPQQQLQAEADHLGKELQSVSAKLQAQVEENELWNRLNQQQ 286
Query: 278 EAEIDSIHQLVVGATENIKEGNEDIRE 304
E ++ + + E I+E E IRE
Sbjct: 287 EEKMWRQEEKIQEREEKIQEQEEKIRE 313
>gi|37577287 syntaxin 2 isoform 1 [Homo sapiens]
Length = 287
Score = 37.7 bits (86), Expect = 0.015
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 176 KTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSP------ 229
+T+ S S K ++ ++ +E ER + Q +L G +DEL
Sbjct: 116 RTQHSVLSRKFVEAMAEYNEAQTLFRERSK---GRIQRQLEITGRTTTDDELEEMLESGK 172
Query: 230 -----EEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAE---I 281
+I Q ++ + E+ S ++ ++E I L E+F + + E + I
Sbjct: 173 PSIFTSDIISDSQITRQALNEIESRHKDIMKLE---TSIRELHEMFMDMAMFVETQGEMI 229
Query: 282 DSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSLLFL 330
++I + V+ AT+ ++ E+ ++AIK + R L F+++C LL +
Sbjct: 230 NNIERNVMNATDYVEHAKEETKKAIKYQSKAR-RKLMFIIICVIVLLVI 277
>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
sapiens]
Length = 1782
Score = 37.4 bits (85), Expect = 0.019
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 82 MSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDY 141
+SEY + ER++++ AQ ++ + Q+ TE KE+ QV AV D
Sbjct: 849 LSEYDAV---EREKME--AQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADG---- 899
Query: 142 LKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVS-QSPSKDSEENPAT 200
R + E+ + V + L ++E E T E E ++ + P +E P
Sbjct: 900 -TRAATIIEERSPSWISASVTEP-LEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPEN 957
Query: 201 EE-RPEKILAETQ--PELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDE----- 252
E R + +++E + PE T + G +E ++ ++ L D
Sbjct: 958 REARGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTE 1017
Query: 253 ----VRQIEGRVVEISRLQEIFTEKVLQQEAE 280
V+++EG V +I QE T++VLQ AE
Sbjct: 1018 EATPVQEVEGGVPDIEE-QERRTQEVLQAVAE 1048
Score = 29.6 bits (65), Expect = 4.0
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 182 SSEKVSQSPSK-DSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ 240
S +K Q P K D+EE+ E EK+ A Q + E LS E ++ +
Sbjct: 324 SEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEE 383
Query: 241 RLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKV-LQQEAEIDSIHQLVVGATENIKEGN 299
++ G ++ + E+F EK+ + QE + +H ++E
Sbjct: 384 QVSGSQGPSEEKPAPL---------ATEVFDEKIEVHQEEVVAEVH------VSTVEERT 428
Query: 300 EDIREAIKNNAG 311
E+ + ++ AG
Sbjct: 429 EEQKTEVEETAG 440
>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
sapiens]
Length = 1684
Score = 37.4 bits (85), Expect = 0.019
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 25/212 (11%)
Query: 82 MSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDY 141
+SEY + ER++++ AQ ++ + Q+ TE KE+ QV AV D
Sbjct: 751 LSEYDAV---EREKME--AQQAQKSAEQPEQKAATEVSKELSESQVHMMAAAVADG---- 801
Query: 142 LKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVS-QSPSKDSEENPAT 200
R + E+ + V + L ++E E T E E ++ + P +E P
Sbjct: 802 -TRAATIIEERSPSWISASVTEP-LEQVEAEAALLTEEVLEREVIAEEEPPTVTEPLPEN 859
Query: 201 EE-RPEKILAETQ--PELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDE----- 252
E R + +++E + PE T + G +E ++ ++ L D
Sbjct: 860 REARGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQLTDSPDTTE 919
Query: 253 ----VRQIEGRVVEISRLQEIFTEKVLQQEAE 280
V+++EG V +I QE T++VLQ AE
Sbjct: 920 EATPVQEVEGGVPDIEE-QERRTQEVLQAVAE 950
Score = 29.6 bits (65), Expect = 4.0
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 182 SSEKVSQSPSK-DSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQ 240
S +K Q P K D+EE+ E EK+ A Q + E LS E ++ +
Sbjct: 226 SEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEPRLSAEYEKVELPSEE 285
Query: 241 RLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKV-LQQEAEIDSIHQLVVGATENIKEGN 299
++ G ++ + E+F EK+ + QE + +H ++E
Sbjct: 286 QVSGSQGPSEEKPAPL---------ATEVFDEKIEVHQEEVVAEVH------VSTVEERT 330
Query: 300 EDIREAIKNNAG 311
E+ + ++ AG
Sbjct: 331 EEQKTEVEETAG 342
>gi|52856430 protein expressed in prostate, ovary, testis, and
placenta 15 [Homo sapiens]
Length = 581
Score = 37.0 bits (84), Expect = 0.025
Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 94 DQIDQDAQIFMRTCSEA-IQQLRTEAHKEIHSQQ----------VKEHRTAVLDFIEDYL 142
D+ + A I C A I L E + ++ SQ V H + + + DY
Sbjct: 302 DRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSSHHHVICELLSDYK 361
Query: 143 -KRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSP--SKDSEENPA 199
K++ K+ SE +L+ E K E++ EK+SQ P +KD +
Sbjct: 362 EKQMLKISSEN-----SNPEQDLKLTSEEESQRLKVSENSQPEKMSQEPEINKDCDREVE 416
Query: 200 TEERPEKILAETQPELGTWG--DGKGEDELSPEEIQMFEQENQRLIGEMNSLF--DEVRQ 255
E + PE T G G G+D L P+ + + ENQ+ N + DE
Sbjct: 417 EEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQR-KSRKPENQQFPDTENEEYHSDEQND 475
Query: 256 IEGRVVE-----ISRLQEIFTEKVLQ---QEAEIDSIHQLVVGATENIKEGNEDIREAI 306
+ ++ E IS+ EI T K Q E E++S L E++ N +RE I
Sbjct: 476 TQKQLSEEQNTGISQ-DEILTNKQKQIEVAEKEMNSKLSLSHKKEEDLLRENSMLREEI 533
>gi|239745058 PREDICTED: hypothetical protein XP_002343353 [Homo
sapiens]
Length = 544
Score = 37.0 bits (84), Expect = 0.025
Identities = 62/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 94 DQIDQDAQIFMRTCSEA-IQQLRTEAHKEIHSQQ----------VKEHRTAVLDFIEDYL 142
D+ + A I C A I L E + ++ SQ V H + + + DY
Sbjct: 265 DRYGRTALILAVCCGSASIVNLLLEQNVDVSSQDLSGQTAREYAVSSHHHVICELLSDYK 324
Query: 143 -KRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSP--SKDSEENPA 199
K++ K+ SE +L+ E K E++ EK+SQ P +KD +
Sbjct: 325 EKQMLKISSEN-----SNPEQDLKLTSEEESQRLKVSENSQPEKMSQEPEINKDCDREVE 379
Query: 200 TEERPEKILAETQPELGTWG--DGKGEDELSPEEIQMFEQENQRLIGEMNSLF--DEVRQ 255
E + PE T G G G+D L P+ + + ENQ+ N + DE
Sbjct: 380 EEIKKHGSNPVGLPENLTNGASAGNGDDGLIPQR-KSRKPENQQFPDTENEEYHSDEQND 438
Query: 256 IEGRVVE-----ISRLQEIFTEKVLQ---QEAEIDSIHQLVVGATENIKEGNEDIREAI 306
+ ++ E IS+ EI T K Q E E++S L E++ N +RE I
Sbjct: 439 TQKQLSEEQNTGISQ-DEILTNKQKQIEVAEKEMNSELSLSHKKEEDLLRENSMLREEI 496
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 37.0 bits (84), Expect = 0.025
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 30/238 (12%)
Query: 92 ERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSE 151
E Q ++ A+ T E I L+ KE+H +++ TA+ + Y K V L +E
Sbjct: 449 ENKQFEKIAEELKGTEQELIGLLQAR-EKEVHDLEIQ--LTAITTSEQYYSKEVKDLKTE 505
Query: 152 QRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEK---IL 208
++K +KL E T+E++ ++ +D N EER K L
Sbjct: 506 LENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENL 565
Query: 209 AETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVR-QIEGRVVEISRLQ 267
ET+ +L + E E EE++ E + + + + +R Q+E + I LQ
Sbjct: 566 QETETQL------RNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQ 619
Query: 268 E-----------------IFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKN 308
+ ++ KV + E E++S Q T+ ++ ED + + +N
Sbjct: 620 QENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEEN 677
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 36.6 bits (83), Expect = 0.032
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 115 RTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRA----------IRVKRVVDKK 164
R E KE +Q + E +T + D +E R KL+ ++ + ++R +D+K
Sbjct: 345 RVEELKE-DNQVLLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRK 403
Query: 165 RLSKLEPEPNT-----------------KTRESTSSEKVSQSPSKD--SEENPATEERPE 205
++ +L E T + + + + ++S++P K E N T R
Sbjct: 404 KIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLL 463
Query: 206 KI------LAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGR 259
K+ L +T EL T D E + +I E+ENQRL ++ L +E+ Q +
Sbjct: 464 KLEMENQSLTKTVEELRTTVDSV---EGNASKILKMEKENQRLSKKVEILENEIVQEKQS 520
Query: 260 VVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKN 308
+ L + ++ Q E I+++ + + +++ NE + + + +
Sbjct: 521 LQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 569
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 36.6 bits (83), Expect = 0.032
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 115 RTEAHKEIHSQQVKEHRTAVLDFIEDYLKRVCKLYSEQRA----------IRVKRVVDKK 164
R E KE +Q + E +T + D +E R KL+ ++ + ++R +D+K
Sbjct: 345 RVEELKE-DNQVLLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRK 403
Query: 165 RLSKLEPEPNT-----------------KTRESTSSEKVSQSPSKD--SEENPATEERPE 205
++ +L E T + + + + ++S++P K E N T R
Sbjct: 404 KIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLL 463
Query: 206 KI------LAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGR 259
K+ L +T EL T D E + +I E+ENQRL ++ L +E+ Q +
Sbjct: 464 KLEMENQSLTKTVEELRTTVDSV---EGNASKILKMEKENQRLSKKVEILENEIVQEKQS 520
Query: 260 VVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKN 308
+ L + ++ Q E I+++ + + +++ NE + + + +
Sbjct: 521 LQNCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSS 569
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,961,800
Number of Sequences: 37866
Number of extensions: 548995
Number of successful extensions: 4348
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 3821
Number of HSP's gapped (non-prelim): 846
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.