Guide to the Human Genome
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Search of human proteins with 8051608

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens]
         (316 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens]            634   0.0  
gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens]            634   0.0  
gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens]            634   0.0  
gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens]              634   0.0  
gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens]              255   3e-68
gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens]         34   0.19 
gi|221316624 dystonin isoform 4 [Homo sapiens]                         33   0.33 
gi|221316622 dystonin isoform 3 [Homo sapiens]                         33   0.33 
gi|221316618 dystonin isoform 2 [Homo sapiens]                         33   0.33 
gi|34577047 dystonin isoform 1 [Homo sapiens]                          33   0.33 
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]              33   0.33 
gi|237858621 polyamine modulated factor 1 binding protein 1 isof...    32   0.74 
gi|237858619 polyamine modulated factor 1 binding protein 1 isof...    32   0.74 
gi|213688415 coiled-coil domain containing 66 isoform 1 [Homo sa...    32   0.96 
gi|213688413 coiled-coil domain containing 66 isoform 2 [Homo sa...    32   0.96 
gi|61102725 la related protein isoform 2 [Homo sapiens]                31   1.6  
gi|39725634 la related protein isoform 1 [Homo sapiens]                31   1.6  
gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]           30   2.1  
gi|6679074 nucleoporin like 2 [Homo sapiens]                           30   2.8  
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...    29   6.2  
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa...    29   6.2  
gi|70980531 GGA binding partner [Homo sapiens]                         29   6.2  
gi|21735569 claspin [Homo sapiens]                                     28   8.2  

>gi|187761311 heme oxygenase (decyclizing) 2 [Homo sapiens]
          Length = 316

 Score =  634 bits (1636), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
           MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60

Query: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
           NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120

Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
           WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180

Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
           GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240

Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
           GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300

Query: 301 AAGVALAAGLLAWYYM 316
           AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316


>gi|187761309 heme oxygenase (decyclizing) 2 [Homo sapiens]
          Length = 316

 Score =  634 bits (1636), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
           MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60

Query: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
           NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120

Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
           WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180

Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
           GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240

Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
           GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300

Query: 301 AAGVALAAGLLAWYYM 316
           AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316


>gi|187761307 heme oxygenase (decyclizing) 2 [Homo sapiens]
          Length = 316

 Score =  634 bits (1636), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
           MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60

Query: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
           NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120

Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
           WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180

Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
           GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240

Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
           GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300

Query: 301 AAGVALAAGLLAWYYM 316
           AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316


>gi|8051608 heme oxygenase (decyclizing) 2 [Homo sapiens]
          Length = 316

 Score =  634 bits (1636), Expect = 0.0
 Identities = 316/316 (100%), Positives = 316/316 (100%)

Query: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
           MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG
Sbjct: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60

Query: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120
           NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN
Sbjct: 61  NIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGEN 120

Query: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180
           WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST
Sbjct: 121 WEEQVQCPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPST 180

Query: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240
           GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA
Sbjct: 181 GEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQA 240

Query: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300
           GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL
Sbjct: 241 GSTLARETLEDGFPVHDGKGDMRKCPFYAAEQDKGALEGSSCPFRTAMAVLRKPSLQFIL 300

Query: 301 AAGVALAAGLLAWYYM 316
           AAGVALAAGLLAWYYM
Sbjct: 301 AAGVALAAGLLAWYYM 316


>gi|4504437 heme oxygenase (decyclizing) 1 [Homo sapiens]
          Length = 288

 Score =  255 bits (652), Expect = 3e-68
 Identities = 117/208 (56%), Positives = 160/208 (76%)

Query: 32  DLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDH 91
           DLSE LKE TKE H +AEN +F+++F KG + ++ FKL   +LY  Y ALEEE+ERNK+ 
Sbjct: 12  DLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKES 71

Query: 92  PAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEPELLVA 151
           P FAP+YFP ELHRK AL +D+ +++G  W+E +    A Q+YV+R+H +G+ EPELLVA
Sbjct: 72  PVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVA 131

Query: 152 HAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDL 211
           HAYTRY+GDLSGGQVLKK+AQ+AL LPS+GEG  F+ F N+ +A +FKQLYR+RMN+L++
Sbjct: 132 HAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEM 191

Query: 212 NMKTKERIVEEANKAFEYNMQIFNELDQ 239
               ++R++EEA  AF  N+Q+F EL +
Sbjct: 192 TPAVRQRVIEEAKTAFLLNIQLFEELQE 219


>gi|148612821 tetratricopeptide repeat domain 29 [Homo sapiens]
          Length = 475

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 39/255 (15%)

Query: 16  KKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKE-----LFKLA 70
           K + G  E E  M M     LL E   +  + AE+ +      +G I K+     L  LA
Sbjct: 174 KIDCGKKEAEAHMHMG----LLYEEDGQLLEAAEHYEAFHQLTQGRIWKDETGRSLNLLA 229

Query: 71  TTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDME----YFFGENWEEQVQ 126
             +L  TY  L ++M  NK++     +        KE   K ME    Y+ G        
Sbjct: 230 CESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAEASYYLG-------L 282

Query: 127 CPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALK-LPSTGEGTQ 185
              AA++Y          E  L V   Y +   DL     L +  +   K L S GE T 
Sbjct: 283 AHLAAEEY----------ETALTVLDTYCKISTDLDDDLSLGRGYEAIAKVLQSQGEMT- 331

Query: 186 FYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYN--MQIFNELDQAGST 243
               E +   ++F ++ R    +LDL ++    + +  N+   YN   + F +       
Sbjct: 332 ----EAIKYLKKFVKIARNNFQSLDL-VRASTMLGDIYNEKGYYNKASECFQQAFDTTVE 386

Query: 244 LARETLEDGFPVHDG 258
           L    L D   VH G
Sbjct: 387 LMSMPLMDETKVHYG 401


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)

Query: 5    VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
            +E  E   E EKK      KE Q  ++++S+ LK+  K         +   + +  + KK
Sbjct: 1457 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1514

Query: 65   ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
            E    A   +    +   ++M   ERN+       L     L   E+L +  E    G+ 
Sbjct: 1515 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1574

Query: 121  WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
              E+    +  Q+Y E++  I          L+ H     +GD  G   LKK   +  +L
Sbjct: 1575 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1632

Query: 178  PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
                +G+   L E V N + F +    +++  D  +  ++++ E   K  + N+   Q  
Sbjct: 1633 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1691

Query: 235  NELDQAGSTLARETLE 250
             ELD+  +T  +E  E
Sbjct: 1692 KELDKVVTTAIKEETE 1707


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)

Query: 5    VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
            +E  E   E EKK      KE Q  ++++S+ LK+  K         +   + +  + KK
Sbjct: 1468 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1525

Query: 65   ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
            E    A   +    +   ++M   ERN+       L     L   E+L +  E    G+ 
Sbjct: 1526 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1585

Query: 121  WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
              E+    +  Q+Y E++  I          L+ H     +GD  G   LKK   +  +L
Sbjct: 1586 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1643

Query: 178  PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
                +G+   L E V N + F +    +++  D  +  ++++ E   K  + N+   Q  
Sbjct: 1644 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1702

Query: 235  NELDQAGSTLARETLE 250
             ELD+  +T  +E  E
Sbjct: 1703 KELDKVVTTAIKEETE 1718


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)

Query: 5    VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
            +E  E   E EKK      KE Q  ++++S+ LK+  K         +   + +  + KK
Sbjct: 1606 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1663

Query: 65   ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
            E    A   +    +   ++M   ERN+       L     L   E+L +  E    G+ 
Sbjct: 1664 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1723

Query: 121  WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
              E+    +  Q+Y E++  I          L+ H     +GD  G   LKK   +  +L
Sbjct: 1724 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1781

Query: 178  PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
                +G+   L E V N + F +    +++  D  +  ++++ E   K  + N+   Q  
Sbjct: 1782 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1840

Query: 235  NELDQAGSTLARETLE 250
             ELD+  +T  +E  E
Sbjct: 1841 KELDKVVTTAIKEETE 1856


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)

Query: 5    VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
            +E  E   E EKK      KE Q  ++++S+ LK+  K         +   + +  + KK
Sbjct: 1428 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1485

Query: 65   ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
            E    A   +    +   ++M   ERN+       L     L   E+L +  E    G+ 
Sbjct: 1486 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1545

Query: 121  WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
              E+    +  Q+Y E++  I          L+ H     +GD  G   LKK   +  +L
Sbjct: 1546 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1603

Query: 178  PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
                +G+   L E V N + F +    +++  D  +  ++++ E   K  + N+   Q  
Sbjct: 1604 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1662

Query: 235  NELDQAGSTLARETLE 250
             ELD+  +T  +E  E
Sbjct: 1663 KELDKVVTTAIKEETE 1678


>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
          Length = 5171

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 15/256 (5%)

Query: 5    VETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKK 64
            +E  E   E EKK      KE Q  ++++S+ LK+  K         +   + +  + KK
Sbjct: 1102 LEEEEKSLEEEKKEHVEKAKELQKWVSNISKTLKDAEKAGKPPFSKQKISSEEI--STKK 1159

Query: 65   ELFKLATTALYFTYSALEEEM---ERNKDHPAFAPLYFPMELHRKEALTKDME-YFFGEN 120
            E    A   +    +   ++M   ERN+       L     L   E+L +  E    G+ 
Sbjct: 1160 EQLSEALQTIQLFLAKHGDKMTDEERNELEKQVKTLQESYNLLFSESLKQLQESQTSGDV 1219

Query: 121  WEEQVQCPKAAQKYVERIHYIGQ---NEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKL 177
              E+    +  Q+Y E++  I          L+ H     +GD  G   LKK   +  +L
Sbjct: 1220 KVEEKIVAERQQEYKEKLQGICDLLTQTENRLIGHQEAFMIGD--GTVELKKYQSKQEEL 1277

Query: 178  PSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNM---QIF 234
                +G+   L E V N + F +    +++  D  +  ++++ E   K  + N+   Q  
Sbjct: 1278 QKDMQGSAQALAEVVKNTENFLKENGEKLSQEDKAL-IEQKLNEAKIKCEQLNLKAEQSK 1336

Query: 235  NELDQAGSTLARETLE 250
             ELD+  +T  +E  E
Sbjct: 1337 KELDKVVTTAIKEETE 1352


>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
           b [Homo sapiens]
          Length = 882

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 32/198 (16%)

Query: 12  DESEKKNSGALEKENQMRMADL-----------------SELLKEGTKEAHDRAENTQFV 54
           D++ K+NS  LE+EN+   A+L                  +++++  KE   + E+   +
Sbjct: 503 DKTLKENSRKLEEENENLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSL 562

Query: 55  KDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDME 114
           +  L   ++KE   L TT     Y AL  +    +D    A      +L+   + TK ++
Sbjct: 563 QAQLDKALQKEKHYLQTTITKEAYDALSRKSAACQDDLTQA----LEKLNHVTSETKSLQ 618

Query: 115 YFFGENWEEQVQCPKAAQKYVERIHYI--------GQNEPELLVAHAYTRYMGDLSGGQV 166
               +  E++ Q  +    Y ER+  +        G ++   L  HA+ + + ++S  QV
Sbjct: 619 QSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQESELEVHAFDKKLEEMS-CQV 677

Query: 167 L--KKVAQRALKLPSTGE 182
           L  +K  Q  LK+ +  E
Sbjct: 678 LQWQKQHQNDLKMLAAKE 695


>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
           a [Homo sapiens]
          Length = 1007

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 32/198 (16%)

Query: 12  DESEKKNSGALEKENQMRMADL-----------------SELLKEGTKEAHDRAENTQFV 54
           D++ K+NS  LE+EN+   A+L                  +++++  KE   + E+   +
Sbjct: 648 DKTLKENSRKLEEENENLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSL 707

Query: 55  KDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDME 114
           +  L   ++KE   L TT     Y AL  +    +D    A      +L+   + TK ++
Sbjct: 708 QAQLDKALQKEKHYLQTTITKEAYDALSRKSAACQDDLTQA----LEKLNHVTSETKSLQ 763

Query: 115 YFFGENWEEQVQCPKAAQKYVERIHYI--------GQNEPELLVAHAYTRYMGDLSGGQV 166
               +  E++ Q  +    Y ER+  +        G ++   L  HA+ + + ++S  QV
Sbjct: 764 QSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRGFHQESELEVHAFDKKLEEMS-CQV 822

Query: 167 L--KKVAQRALKLPSTGE 182
           L  +K  Q  LK+ +  E
Sbjct: 823 LQWQKQHQNDLKMLAAKE 840


>gi|213688415 coiled-coil domain containing 66 isoform 1 [Homo
           sapiens]
          Length = 948

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 12/89 (13%)

Query: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
           ++A+VE      + E++     E+E ++R+A   E +++            Q+ +D LK 
Sbjct: 471 ITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQK------------QYEEDILKQ 518

Query: 61  NIKKELFKLATTALYFTYSALEEEMERNK 89
             K+E+  L T  L+ T    +E  +R K
Sbjct: 519 KQKEEIMTLKTNELFQTMQRAQELAQRLK 547


>gi|213688413 coiled-coil domain containing 66 isoform 2 [Homo
           sapiens]
          Length = 914

 Score = 31.6 bits (70), Expect = 0.96
 Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 12/89 (13%)

Query: 1   MSAEVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLKG 60
           ++A+VE      + E++     E+E ++R+A   E +++            Q+ +D LK 
Sbjct: 437 ITAQVEEKRRKKQLEEEQRKKEEQEEELRLAQEREEMQK------------QYEEDILKQ 484

Query: 61  NIKKELFKLATTALYFTYSALEEEMERNK 89
             K+E+  L T  L+ T    +E  +R K
Sbjct: 485 KQKEEIMTLKTNELFQTMQRAQELAQRLK 513


>gi|61102725 la related protein isoform 2 [Homo sapiens]
          Length = 1096

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 55  KDFLKGNIKKELFKLATTALYFTYSALEEE--MERNKDHPAFAPLYFPMELHRKEALTKD 112
           ++ LK  IK+++        YF+   LE +  + R  D   F P+      HR +ALT D
Sbjct: 400 QELLKDYIKRQI------EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTD 453

Query: 113 MEYFF 117
           +   F
Sbjct: 454 ISLIF 458


>gi|39725634 la related protein isoform 1 [Homo sapiens]
          Length = 1019

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 55  KDFLKGNIKKELFKLATTALYFTYSALEEE--MERNKDHPAFAPLYFPMELHRKEALTKD 112
           ++ LK  IK+++        YF+   LE +  + R  D   F P+      HR +ALT D
Sbjct: 323 QELLKDYIKRQI------EYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTD 376

Query: 113 MEYFF 117
           +   F
Sbjct: 377 ISLIF 381


>gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]
          Length = 5120

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 13/83 (15%)

Query: 12   DESEKKNSGALEKENQMRMADLSE----LLKEGTKEAHDRAENTQFVKDFLKGNIKKELF 67
            ++ E+K+ GALEKE + R+ ++ E     L E  K   DR      ++  L+   K+E  
Sbjct: 2281 EQEERKHKGALEKEKE-RLQNMDEEEYDALTEEEKLTFDRG-----IQQALRERKKREQE 2334

Query: 68   KLATTALYFTYSALEEEMERNKD 90
            +LA          L++E+ER K+
Sbjct: 2335 RLAKE---MQEKKLQQELERQKE 2354


>gi|6679074 nucleoporin like 2 [Homo sapiens]
          Length = 423

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 15/209 (7%)

Query: 87  RNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQCPKAAQKYVERIHYIGQNEP 146
           R+++ P F+        +RKE        F   + +EQ    K  +  V+ +     +  
Sbjct: 73  RDQEKPYFSSFDSGASTNRKEGFGLSENPFASLSPDEQKDEKKLLEGIVKDMEVWESSGQ 132

Query: 147 ELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARM 206
            +   ++  +   ++SG      ++   L+L      T   L   +++ Q+    +R R+
Sbjct: 133 WMFSVYSPVKKKPNISG---FTDISPEELRLEYHNFLTSNNLQSYLNSVQRLINQWRNRV 189

Query: 207 NAL-DLNMKTKERIVEEANKAFEYNMQIFNELDQAGSTLARETLEDGFPVHDGKGD---- 261
           N L  LN+ TK  ++ +           F      GS+ A   +  GFPV++   D    
Sbjct: 190 NELKSLNISTKVALLSDVKDGVNQAAPAFG----FGSSQAATFMSPGFPVNNSSSDNAQN 245

Query: 262 ---MRKCPFYAAEQDKGALEGSSCPFRTA 287
                   F AA     A  GSS  F  A
Sbjct: 246 FSFKTNSGFAAASSGSPAGFGSSPAFGAA 274


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
            sapiens]
          Length = 1690

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 16/115 (13%)

Query: 9    EGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLK--GNIKKEL 66
            +G D SEKK    LEK        + +L  EG +++ +  +  +  K  LK   +  KEL
Sbjct: 1497 KGKDSSEKKRKRKLEK--------VEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKEL 1548

Query: 67   FKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENW 121
             KLA         A EEE ++ K+  A A +    E   K+   K ++     +W
Sbjct: 1549 NKLAKKL------AKEEERKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDW 1597


>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
            sapiens]
          Length = 1641

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 16/115 (13%)

Query: 9    EGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFLK--GNIKKEL 66
            +G D SEKK    LEK        + +L  EG +++ +  +  +  K  LK   +  KEL
Sbjct: 1502 KGKDSSEKKRKRKLEK--------VEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKEL 1553

Query: 67   FKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENW 121
             KLA         A EEE ++ K+  A A +    E   K+   K ++     +W
Sbjct: 1554 NKLAKKL------AKEEERKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDW 1602


>gi|70980531 GGA binding partner [Homo sapiens]
          Length = 441

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)

Query: 11  VDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRA-ENTQFVKDFLKGNIKKELFKL 69
           +  S K+   A+EK+    +   +   +E     H R  E     K+ LK  IK+ L + 
Sbjct: 221 LQSSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALIQQ 280

Query: 70  ATTALYFTYSALEEEMERNKD 90
           +          LEEE +RNK+
Sbjct: 281 SQEQKEILEKCLEEERQRNKE 301


>gi|21735569 claspin [Homo sapiens]
          Length = 1339

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 4   EVETSEGVDESEKKNSGALEKENQMRMADLSELLKEGTKEAHDRAENTQFVKDFL 58
           E E  E  DESE+     +EKE +       EL +E  KE  +  E  Q   +FL
Sbjct: 632 EEEEEEMTDESEEDGEEKVEKEEKE-----EELEEEEEKEEEEEEEGNQETAEFL 681


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,910,450
Number of Sequences: 37866
Number of extensions: 469463
Number of successful extensions: 1486
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1479
Number of HSP's gapped (non-prelim): 28
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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